Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
AraC family transcriptional regulator |
NC_015379 (Pseudomonas brassicacearum NFM421) |
1e-18 |
43 |
|
protein RspB |
NC_016830 (Pseudomonas fluorescens F113) |
3e-18 |
41 |
|
YscI/HrpB family type III secretion apparatus protein |
NC_015276 (Marinomonas mediterranea MMB-1) |
5e-18 |
48 |
|
HrpB protein |
NC_010694 (Erwinia tasmaniensis Et1/99) |
3e-17 |
42 |
|
type III secretion system protein |
NC_013971 (Erwinia amylovora ATCC 49946) |
6e-17 |
42 |
|
type III secretion protein HrpB |
NC_013961 (Erwinia amylovora CFBP1430) |
6e-17 |
42 |
|
Hrp/hrc secretion/translocation pathway protein HrpB |
NC_012214 (Erwinia pyrifoliae Ep1/96) |
1e-16 |
42 |
|
hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation pathway-hrpB protein |
NC_017445 (Erwinia sp. Ejp617) |
1e-16 |
42 |
|
type III secretion protein |
NC_018525 (Pectobacterium carotovorum PCC21) |
7e-16 |
42 |
|
YscI/HrpB family type III secretion apparatus lipoprotein |
NC_012917 (Pectobacterium carotovorum PC1) |
2e-15 |
42 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='DQ168848' AND ph.id_pai_orf='48' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc