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PAthogenisity Island DataBase (PAI DB)

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Homologs of STY4570 gene of NC_003198_P9

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) STY4570
( NP_458655.1 )

putative exported protein

NC_003198
(Salmonella enterica CT18)

0.0

100

2) STBHUCCB_45190
( YP_005219939.1 )

hypothetical protein

NC_016832
(Salmonella enterica P-stx-12)

0.0

3) t4268
( NP_807865.1 )

hypothetical protein

NC_004631
(Salmonella enterica Ty2)

0.0

4) TY21A_21730
( YP_007928506.1 )

hypothetical protein

NC_021176
(Salmonella enterica Ty21a)

0.0

5) SPC_4426
( YP_002639920.1 )

hypothetical protein

NC_012125
(Salmonella enterica RKS4594)

0.0

6) CFSAN002050_22290
( YP_008262325.1 )

hypothetical protein

NC_021818
(Salmonella enterica CFSAN002050)

3e-124

7) plu1083
( NP_928408.1 )

hypothetical protein

NC_005126
(Photorhabdus luminescens TTO1)

2e-121

8) Ser39006_1506
( YP_008521888.1 )

integrating conjugative element protein, PFL_4705 family

NC_022268
(Serratia sp. ATCC 39006)

6e-118

9) PMI2579
( YP_002152298.1 )

hypothetical protein

NC_010554
(Proteus mirabilis HI4320)

2e-115

10) YpsIP31758_3707
( YP_001402661.1 )

hypothetical protein

NC_009708
(Yersinia pseudotuberculosis IP 31758)

2e-115

11) YE3484
( YP_001007643.1 )

hypothetical protein

NC_008800
(Yersinia enterocolitica 8081)

5e-112

12) UMNK88_5036
( YP_006136676.1 )

hypothetical protein

NC_017641
(Escherichia coli UMNK88)

3e-111

13) ECA0570
( YP_048686.1 )

hypothetical protein

NC_004547
(Pectobacterium atrosepticum SCRI1043)

2e-110

14) SPAB_05384
( YP_001591490.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

1e-108

15) NT01EI_0345
( YP_002931822.1 )

hypothetical protein

NC_012779
(Edwardsiella ictaluri 93-146)

8e-109

16) ECED1_3564
( YP_002399423.1 )

hypothetical protein

NC_011745
(Escherichia coli ED1a)

4e-108

17) EpC_31950
( YP_002650176.1 )

secreted protein

NC_012214
(Erwinia pyrifoliae Ep1/96)

8e-107

18) EJP617_06500
( YP_005817218.1 )

hypothetical protein

NC_017445
(Erwinia sp. Ejp617)

2e-106

19) Spro_0335
( YP_001476573.1 )

hypothetical protein

NC_009832
(Serratia proteamaculans 568)

8e-106

20) ECL_00442
( YP_003610957.1 )

putative secreted protein

NC_014121
(Enterobacter cloacae ATCC 13047)

9e-106

21) EPYR_03450
( YP_005804201.1 )

hypothetical protein

NC_017390
(Erwinia pyrifoliae DSM 12163)

2e-105

22) Spro_4088
( YP_001480311.1 )

hypothetical protein

NC_009832
(Serratia proteamaculans 568)

2e-104

23) EpC_30330
( YP_002650014.1 )

hypothetical protein

NC_012214
(Erwinia pyrifoliae Ep1/96)

3e-104

24) NRG857_20900
( YP_006122522.1 )

hypothetical protein

NC_017634
(Escherichia coli NRG 857C)

4e-104

25) W5S_3504
( YP_006284446.1 )

Integrating conjugative element protein, PFL4705 family

NC_017845
(Pectobacterium sp. SCC3193)

1e-103

26) Spro_4171
( YP_001480393.1 )

hypothetical protein

NC_009832
(Serratia proteamaculans 568)

3e-103

27) XNC1_3678
( YP_003713808.1 )

hypothetical protein

NC_014228
(Xenorhabdus nematophila ATCC 19061)

3e-103

28) XBJ1_1527
( YP_003467434.1 )

hypothetical protein

NC_013892
(Xenorhabdus bovienii SS-2004)

1e-102

29) EPYR_03272
( YP_005804023.1 )

hypothetical protein

NC_017390
(Erwinia pyrifoliae DSM 12163)

8e-103

30) YPZ3_0317
( YP_003566489.1 )

hypothetical protein

NC_014029
(Yersinia pestis Z176003)

3e-102

31) KPHS_45020
( YP_005228802.1 )

hypothetical protein

NC_016845
(Klebsiella pneumoniae HS11286)

3e-102

32) N559_0805
( YP_008423875.1 )

integrating conjugative element protein, PFL_4705 family

NC_022082
(Klebsiella pneumoniae JM45)

3e-102

33) XBJ1_3397
( YP_003469279.1 )

hypothetical protein

NC_013892
(Xenorhabdus bovienii SS-2004)

3e-102

34) EbC_pEb10200520
( YP_003739109.1 )

hypothetical protein

NC_014304
(Erwinia billingiae Eb661)

8e-101

35) LF82_686
( YP_002559024.1 )

hypothetical protein

NC_011993
(Escherichia coli LF82)

1e-100

36) SerAS9_0292
( YP_004503715.1 )

integrating conjugative element protein

NC_015567
(Serratia plymuthica AS9)

1e-100

37) SerAS12_0292
( YP_004498763.1 )

integrating conjugative element protein

NC_015566
(Serratia sp. AS12)

1e-100

38) SerAS13_0291
( YP_006023178.1 )

integrating conjugative element protein

NC_017573
(Serratia sp. AS13)

1e-100

39) Pecwa_0658
( YP_003258089.1 )

hypothetical protein

NC_013421
(Pectobacterium wasabiae WPP163)

9e-100

40) PANA5342_3977
( YP_005197407.1 )

hypothetical protein

NC_016816
(Pantoea ananatis LMG 5342)

1e-97

41) PAJ_2503
( YP_005935379.1 )

hypothetical protein

NC_017531
(Pantoea ananatis AJ13355)

6e-98

42) PAGR_g3847
( YP_005994555.1 )

integrating conjugative element protein TraB

NC_017554
(Pantoea ananatis PA13)

6e-89

43) UMN179_00337
( YP_004419271.1 )

integrating conjugative element protein

NC_015460
(Gallibacterium anatis UMN179)

2e-85

44) SARI_03121
( YP_001572103.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

2e-78

45) Plav_3422
( YP_001414682.1 )

hypothetical protein

NC_009719
(Parvibaculum lavamentivorans DS-1)

3e-77

46) D7S_02308
( YP_006287840.1 )

putative exported protein precursor

NC_017846
(Aggregatibacter actinomycetemcomitans D7S-1)

1e-74

47) HD0935
( NP_873428.1 )

hypothetical protein

NC_002940
(Haemophilus ducreyi 35000HP)

7e-73

48) HIB_01090
( YP_005178144.1 )

exported protein

NC_016809
(Haemophilus influenzae 10810)

5e-72

49) NTHI0132
( YP_247778.1 )

hypothetical protein

NC_007146
(Haemophilus influenzae 86-028NP)

5e-72

50) R2866_0583
( YP_005827278.1 )

conserved hypothetical protein p43

NC_017451
(Haemophilus influenzae R2866)

5e-72

51) PARA_11860
( YP_004822880.1 )

hypothetical protein

NC_015964
(Haemophilus parainfluenzae T3T1)

8e-72

52) Tgr7_2857
( YP_002514917.1 )

hypothetical protein

NC_011901
(Thioalkalivibrio sulfidophilus HL-EbGR7)

6e-71

53) F382_13585
( YP_008235515.1 )

hypothetical protein

NC_021743
(Mannheimia haemolytica D153)

2e-70

54) J451_13825
( YP_008224079.1 )

hypothetical protein

NC_021739
(Mannheimia haemolytica D174)

2e-70

55) D650_16470
( YP_007666424.1 )

hypothetical protein

NC_020833
(Mannheimia haemolytica USDA-ARS-USMARC-183)

2e-70

56) N220_08290
( YP_008339102.1 )

hypothetical protein

NC_021883
(Mannheimia haemolytica USMARC_2286)

2e-70

57) PFLU1929
( YP_002871562.1 )

hypothetical protein

NC_012660
(Pseudomonas fluorescens SBW25)

1e-67

58) HS_1762
( YP_719967.1 )

hypothetical protein

NC_008309
(Haemophilus somnus 129PT)

1e-63

59) HELO_4058
( YP_003899127.1 )

hypothetical protein

NC_014532
(Halomonas elongata DSM 2581)

2e-61

• Sequence Alignments

1) STY4570 in NC_003198


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  749 bits (2834),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 492/492 (100%), Positives = 492/492 (100%), Gaps = 0/492 (0%)

Query  1    MQIKANGLMKVLLPVLIVVVCFIGVKACGLKDTTEPEPAKTTNALTELSQDDLKALGIEG  60
            MQIKANGLMKVLLPVLIVVVCFIGVKACGLKDTTEPEPAKTTNALTELSQDDLKALGIEG
Sbjct  1    MQIKANGLMKVLLPVLIVVVCFIGVKACGLKDTTEPEPAKTTNALTELSQDDLKALGIEG  60

Query  61   DTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQET  120
            DTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQET
Sbjct  61   DTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQET  120

Query  121  NEALEKQKTFLLEKLNDLTGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDPENASSATQGE  180
            NEALEKQKTFLLEKLNDLTGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDPENASSATQGE
Sbjct  121  NEALEKQKTFLLEKLNDLTGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDPENASSATQGE  180

Query  181  VIWISPQDAKKTEGQSQSDNDKFTFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNGAESD  240
            VIWISPQDAKKTEGQSQSDNDKFTFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNGAESD
Sbjct  181  VIWISPQDAKKTEGQSQSDNDKFTFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNGAESD  240

Query  241  TRPVYTLPENSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNGKDNLTANGIELPDVEGA  300
            TRPVYTLPENSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNGKDNLTANGIELPDVEGA
Sbjct  241  TRPVYTLPENSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNGKDNLTANGIELPDVEGA  300

Query  301  IVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTLPRPVANTQGNNNDNAGDRGSIGWISD  360
            IVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTLPRPVANTQGNNNDNAGDRGSIGWISD
Sbjct  301  IVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTLPRPVANTQGNNNDNAGDRGSIGWISD  360

Query  361  NNGIPCISGERKSNASTYLPTVALLGMGSSAGDALtqnqyttqnnVNGGVTSALTGNAGQ  420
            NNGIPCISGERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQNNVNGGVTSALTGNAGQ
Sbjct  361  NNGIPCISGERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQNNVNGGVTSALTGNAGQ  420

Query  421  AVLGQTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKVRYDF  480
            AVLGQTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKVRYDF
Sbjct  421  AVLGQTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKVRYDF  480

Query  481  SLPGTGGHYGLD  492
            SLPGTGGHYGLD
Sbjct  481  SLPGTGGHYGLD  492

2) STBHUCCB_45190 in NC_016832


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  747 bits (2828),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 491/492 (99%), Positives = 491/492 (99%), Gaps = 0/492 (0%)

Query  1    MQIKANGLMKVLLPVLIVVVCFIGVKACGLKDTTEPEPAKTTNALTELSQDDLKALGIEG  60
            MQIKANGLMKVLLPVLIVVVCFIGVKACGLKDTTEPEPAKTTNALTELSQDDLKALGIEG
Sbjct  1    MQIKANGLMKVLLPVLIVVVCFIGVKACGLKDTTEPEPAKTTNALTELSQDDLKALGIEG  60

Query  61   DTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQET  120
            DTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQET
Sbjct  61   DTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQET  120

Query  121  NEALEKQKTFLLEKLNDLTGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDPENASSATQGE  180
            NEALEKQKTFLLEKLNDLTGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDPENASSATQGE
Sbjct  121  NEALEKQKTFLLEKLNDLTGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDPENASSATQGE  180

Query  181  VIWISPQDAKKTEGQSQSDNDKFTFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNGAESD  240
            VIWISPQDAKKTEGQSQSDNDKFTFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNGAESD
Sbjct  181  VIWISPQDAKKTEGQSQSDNDKFTFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNGAESD  240

Query  241  TRPVYTLPENSTLVGSKAMTALIGRIPINDKVTDPYPFKVLIGKDNLTANGIELPDVEGA  300
            TRPVYTLPENSTLVGSKAMTALIGRIPINDKVTDPYPFKVL GKDNLTANGIELPDVEGA
Sbjct  241  TRPVYTLPENSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNGKDNLTANGIELPDVEGA  300

Query  301  IVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTLPRPVANTQGNNNDNAGDRGSIGWISD  360
            IVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTLPRPVANTQGNNNDNAGDRGSIGWISD
Sbjct  301  IVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTLPRPVANTQGNNNDNAGDRGSIGWISD  360

Query  361  NNGIPCISGERKSNASTYLPTVALLGMGSSAGDALtqnqyttqnnVNGGVTSALTGNAGQ  420
            NNGIPCISGERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQNNVNGGVTSALTGNAGQ
Sbjct  361  NNGIPCISGERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQNNVNGGVTSALTGNAGQ  420

Query  421  AVLGQTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKVRYDF  480
            AVLGQTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKVRYDF
Sbjct  421  AVLGQTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKVRYDF  480

Query  481  SLPGTGGHYGLD  492
            SLPGTGGHYGLD
Sbjct  481  SLPGTGGHYGLD  492

3) t4268 in NC_004631


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  747 bits (2828),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 491/492 (99%), Positives = 491/492 (99%), Gaps = 0/492 (0%)

Query  1    MQIKANGLMKVLLPVLIVVVCFIGVKACGLKDTTEPEPAKTTNALTELSQDDLKALGIEG  60
            MQIKANGLMKVLLPVLIVVVCFIGVKACGLKDTTEPEPAKTTNALTELSQDDLKALGIEG
Sbjct  1    MQIKANGLMKVLLPVLIVVVCFIGVKACGLKDTTEPEPAKTTNALTELSQDDLKALGIEG  60

Query  61   DTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQET  120
            DTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQET
Sbjct  61   DTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQET  120

Query  121  NEALEKQKTFLLEKLNDLTGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDPENASSATQGE  180
            NEALEKQKTFLLEKLNDLTGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDPENASSATQGE
Sbjct  121  NEALEKQKTFLLEKLNDLTGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDPENASSATQGE  180

Query  181  VIWISPQDAKKTEGQSQSDNDKFTFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNGAESD  240
            VIWISPQDAKKTEGQSQSDNDKFTFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNGAESD
Sbjct  181  VIWISPQDAKKTEGQSQSDNDKFTFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNGAESD  240

Query  241  TRPVYTLPENSTLVGSKAMTALIGRIPINDKVTDPYPFKVLIGKDNLTANGIELPDVEGA  300
            TRPVYTLPENSTLVGSKAMTALIGRIPINDKVTDPYPFKVL GKDNLTANGIELPDVEGA
Sbjct  241  TRPVYTLPENSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNGKDNLTANGIELPDVEGA  300

Query  301  IVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTLPRPVANTQGNNNDNAGDRGSIGWISD  360
            IVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTLPRPVANTQGNNNDNAGDRGSIGWISD
Sbjct  301  IVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTLPRPVANTQGNNNDNAGDRGSIGWISD  360

Query  361  NNGIPCISGERKSNASTYLPTVALLGMGSSAGDALtqnqyttqnnVNGGVTSALTGNAGQ  420
            NNGIPCISGERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQNNVNGGVTSALTGNAGQ
Sbjct  361  NNGIPCISGERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQNNVNGGVTSALTGNAGQ  420

Query  421  AVLGQTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKVRYDF  480
            AVLGQTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKVRYDF
Sbjct  421  AVLGQTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKVRYDF  480

Query  481  SLPGTGGHYGLD  492
            SLPGTGGHYGLD
Sbjct  481  SLPGTGGHYGLD  492

4) TY21A_21730 in NC_021176


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  745 bits (2820),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 489/492 (99%), Positives = 489/492 (99%), Gaps = 0/492 (0%)

Query  1    MQIKANGLMKVLLPVLIVVVCFIGVKACGLKDTTEPEPAKTTNALTELSQDDLKALGIEG  60
            MQIKANGLMKVLLPVLIVVVCFIGVKACGLKDTTEPEPAKTTNALTELSQDDLKALGIEG
Sbjct  1    MQIKANGLMKVLLPVLIVVVCFIGVKACGLKDTTEPEPAKTTNALTELSQDDLKALGIEG  60

Query  61   DTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQET  120
            DTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQET
Sbjct  61   DTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQET  120

Query  121  NEALEKQKTFLLEKLNDLTGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDPENASSATQGE  180
            NEALEKQKTFLLEKLNDLTGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDPENASSATQGE
Sbjct  121  NEALEKQKTFLLEKLNDLTGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDPENASSATQGE  180

Query  181  VIWISPQDAKKTEGQSQSDNDKFTFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNGAESD  240
            VIWISPQDAKKTEGQSQSDNDKFTFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNGAESD
Sbjct  181  VIWISPQDAKKTEGQSQSDNDKFTFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNGAESD  240

Query  241  TRPVYTLPENSILVGSKAMTALIGRIPINDKVTDPYPFKVLIGKDNLTANGIELPDVEGA  300
            TRPVYTLPENS LVGSKAMTALIGRIPINDKVTDPYPFKVL GKDNLTANGIELPDVEGA
Sbjct  241  TRPVYTLPENSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNGKDNLTANGIELPDVEGA  300

Query  301  IVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTLPRPVANTQGNNNDNAGDRGSIGWISD  360
            IVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTLPRPVANTQGNNNDNAGDRGSIGWISD
Sbjct  301  IVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTLPRPVANTQGNNNDNAGDRGSIGWISD  360

Query  361  NNGIPCISGERKSNASTYLPTVALLGMGSSAGDALtqnqyttqnnVNGGVTSALTGNAGQ  420
            NNGIPCISGERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQNNVNGGVTSALTGNAGQ
Sbjct  361  NNGIPCISGERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQNNVNGGVTSALTGNAGQ  420

Query  421  AVLGQTLGGGFKEVTDWVKQRYGQTFDVVYVPPGANVAIHITRQLAVDYEDHGRKVRYDF  480
            AVLGQTLGGGFKEVTDWVKQRYGQTFD VYVPPGANVAIHITRQLAVDYEDHGRKVRYDF
Sbjct  421  AVLGQTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKVRYDF  480

Query  481  SLPGTGGHYGLD  492
            SLPGTGGHYGLD
Sbjct  481  SLPGTGGHYGLD  492

5) SPC_4426 in NC_012125


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  735 bits (2779),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 471/472 (99%), Positives = 471/472 (99%), Gaps = 0/472 (0%)

Query  13   CFIGVKACGLKDTTEPEPAKTTNALTELSQDDLKALGIEGDTSADTLRTLIGALRDVRAR  72
            CFIGVKACGLKDTTEPEPAKTTNALTELSQDDLKALGIEGDTSADTLRTLIGALRDVRAR
Sbjct  21   CFIGVKACGLKDTTEPEPAKTTNALTELSQDDLKALGIEGDTSADTLRTLIGALRDVRAR  80

Query  73   QAVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQETNEALEKQKTFLLEKLNDLTG  132
            QAVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQETNEALEKQKTFLLEKLNDLTG
Sbjct  81   QAVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQETNEALEKQKTFLLEKLNDLTG  140

Query  133  TLKSQGQNTDMVSTGSSSGTDFPVGLGLDPENASSATQGEVIWISPQDAKKTEGQSQSDN  192
            TLKSQGQNTDMVSTGSSSGTDFPVGLGLDPENASSATQGEVIWISPQDAKKTEGQSQSDN
Sbjct  141  TLKSQGQNTDMVSTGSSSGTDFPVGLGLDPENASSATQGEVIWISPQDAKKTEGQSQSDN  200

Query  193  DKFTFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNGAESDTRPVYTLPENSTLVGSKAMT  252
            DKFTFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNGAESDTRPVYTLPENSTLVGSKAMT
Sbjct  201  DKFTFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNGAESDTRPVYTLPENSTLVGSKAMT  260

Query  253  ALIGRIPINDKVTDPYPFKVLIGKDNLTANGIELPDVEGAIVSGTATGDMVLSCVRGTIH  312
            ALIGRIPINDKVTDPYPFKVL GKDNLTANGIELPDVEGAIVSGTATGDMVLSCVRGTIH
Sbjct  261  ALIGRIPINDKVTDPYPFKVLNGKDNLTANGIELPDVEGAIVSGTATGDMVLSCVRGTIH  320

Query  313  SITFVFSDGRIRTLPRPVANTQGNNNDNAGDRGSIGWISDNNGIPCISGERKSNASTYLP  372
            SITFVFSDGRIRTLPRPVANTQGNNNDNAGDRGSIGWISDNNGIPCISGERKSNASTYLP
Sbjct  321  SITFVFSDGRIRTLPRPVANTQGNNNDNAGDRGSIGWISDNNGIPCISGERKSNASTYLP  380

Query  373  TVALLGMGSSAGDALtqnqyttqnnVNGGVTSALTGNAGQAVLGQTLGGGFKEVTDWVKQ  432
            TVALLGMGSSAGDALTQNQYTTQNNVNGGVTSALTGNAGQAVLGQTLGGGFKEVTDWVKQ
Sbjct  381  TVALLGMGSSAGDALTQNQYTTQNNVNGGVTSALTGNAGQAVLGQTLGGGFKEVTDWVKQ  440

Query  433  RYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKVRYDFSLPGTGGHYGLD  484
            RYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKVRYDFSLPGTGGHYGLD
Sbjct  441  RYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKVRYDFSLPGTGGHYGLD  492

6) CFSAN002050_22290 in NC_021818


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  438 bits (1651),  Expect = 3e-124, Method: Compositional matrix adjust.
 Identities = 266/500 (54%), Positives = 384/500 (77%), Gaps = 26/500 (5%)

Query  1    MQIKSNALVKFIVPAVVIAGLAVGLKSCK-NEPAEQPQAKQSGSLKNLSPDELKALGVEG  59
            MQIK+N+L+K ++P +++    +G+K+C  ++ +E   AK + +L +LS D+LKALG+EG
Sbjct  1    MQIKANGLMKVLLPVLIVVVCFIGVKACGLKDTTEPEPAKTTNALTELSQDDLKALGIEG  60

Query  60   DTPEDTLRTLIGRLNDVRDRQKTLDKQNADLVKENERLRRRNQDVSGQVNEAVNGLREQY  119
            DT+ DTLRTLIG L DVR RQ  LD QN  L+ EN++L+  N  V+ Q+++AVN+ +++ 
Sbjct  61   DTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQE-  119

Query  120  DKRQAQLQNEQLSLTAKIQELTDKLKKPDSEK------KTADSDIPLGLGLDgmgsstgg  173
               +  L++++  L  K+++LT+ LK  + +        ++++D+P+GLGLD   +S++ 
Sbjct  120  --TNEALEKQKTFLLEKLNDLTGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDPENASSAT  177

Query  174  sasqgsdgMMWVAPTDQKETDPRDAASGKASPQFPTSFLGENELTRQKAAYEQKVKGRT-  232
             +      ++W++P D K T+  ++ S++    FPTSFL++N ++RQ+A Y++ VK +  
Sbjct  178  QGE-----VIWISPQDAKKTEG-QSQSDNDKFTFPTSFLDDNPVSRQRAEYDRVVKNKQE  231

Query  233  -NEKGAEESAEPVYTLPENSTLVGSRAMTALLGRVPINGTVTDPYPFKVLIGKDNLTANG  291
             + +GAE  + PVYTLPENSTLVGS+AMTAL+GR+PIN+ VTDPYPFKVL GKDNLTANG
Sbjct  232  LDGNGAESDTRPVYTLPENSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNGKDNLTANG  291

Query  292  IELPDVEGAIVSGTASGDWTLSCVRGQVNSVTFVFSDGTVRTLPRPDTSnnaggqnnnaq  351
            IELPDVEGAIVSGTA+GD  LSCVRG ++S+TFVFSDG +RTLPRP ++        +++
Sbjct  292  IELPDVEGAIVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTLPRPVAN-------TQGN  344

Query  352  aKQDTGTSGGIGWISDENGIPCIGGERKSNASTYLPTIFGLSAAGAAGEAMSQGQYTTQN  411
             ++++G  G+IGWISD+NGIPCI+GERKSNASTYLPT+  L+ +++AG+A++Q QYTTQN
Sbjct  345  NNDNAGDRGSIGWISDNNGIPCISGERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQN  404

Query  412  NVN-GISATMTGDAGQAALGKAISGGMSETTDWIKQRYGMTFDAIYVPPGARLAVHITRQ  470
            NVN G+++++TG+AGQA LG++++GG  E TDW+KQRYG TFDA+YVPPGA +A+HITRQ
Sbjct  405  NVNGGVTSALTGNAGQAVLGQTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQ  464

Query  471  LAIDYEDKGRKVRYDFTLPG  490
            LA+DYED GRKVRYDF+LPG
Sbjct  465  LAVDYEDHGRKVRYDFSLPG  484

7) plu1083 in NC_005126


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  429 bits (1614),  Expect = 2e-121, Method: Compositional matrix adjust.
 Identities = 259/490 (53%), Positives = 376/490 (77%), Gaps = 15/490 (3%)

Query  1    MQIKSNGLVKWVVPAFVIAGLVVGIKSCRQSETPVSQTV-SHQALAELSSGELRALGIEG  59
            MQIK+NGL+K ++P +++    +G+K+C   +T  ++   + +AL+ELS ++L+ALGIEG
Sbjct  1    MQIKANGLMKVLLPVLIVVVCFIGVKACGLKDTTEPEPAKTTNALTELSQDDLKALGIEG  60

Query  60   DTPEDTLRTLIGALRSIRVQQAALEKQNAQLLADNEKWRNGSQSMTDQINRVVAGTReet  119
            DT+ DTLRTLIGALR +R +QA L+ QN  L+++N+K +  + S+  QI+  V ++++ET
Sbjct  61   DTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQET  120

Query  120  ekqqqllkaeqqtlFSRLDQLTRQLGNKG----MNINNSLVERDIPLGLGLDNTGQNTTS  175
            +   +  K+     + +L++LT  L ++G    M    S    D+P+GLGLD    ++++
Sbjct  121  NEALEKQKTFL---LEKLNDLTGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDPENASSAT  177

Query  176  GGDRLVWITPQDTLPVDSQVAMSGQPASPRF--PVSFLEDNALSRQKVEYDGITKNQRAI  233
             G+ ++WI+PQD+   ++Q    +Q+ + +F  P SFL+DN++SRQ+ EYD + KN++ +
Sbjct  178  QGE-VIWISPQDAKKTEGQ----SQSDNDKFTFPTSFLDDNPVSRQRAEYDRVVKNKQEL  232

Query  234  TEDHTNEIIRPVYTLPENTTLVGSQAMTALLGRVPVNDKVTDPYPFKVLIGKDNLTANGI  293
              + ++   RPVYTLPEN+TLVGS+AMTAL+GR+P+NDKVTDPYPFKVL GKDNLTANGI
Sbjct  233  DGNGAESDTRPVYTLPENSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNGKDNLTANGI  292

Query  294  ELPDVEGAIVSGMATGDWTLSCVRGNVTSLTFVFADGTVRTVPKSDNRTNGSHHVQDNSS  353
            ELPDVEGAIVSG ATGD  LSCVRG + S+TFVF+DG +RT+P++   T+G+++ +    
Sbjct  293  ELPDVEGAIVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTLPRPVANTQGNNNDNAGDR  352

Query  354  GGIGWLSDNNGIPCISGERKSNASSYLPTLFALSGGTAAGDVLSQSQLTTQTNGYGGATS  413
            G+IGW+SDNNGIPCISGERKSNAS+YLPT+  L+ G++AGD L+Q+Q TTQ N  GG TS
Sbjct  353  GSIGWISDNNGIPCISGERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQNNVNGGVTS  412

Query  414  SLTGDAGKAVLGQAAAGGFKAVSEWVKARYGQTFDAVYVPPGARVAVHITQQIPIDYEER  473
            +LTG+AG+AVLGQ+ +GGFK V++WVK RYGQTFDAVYVPPGA VA+HIT+Q+++DYE++
Sbjct  413  ALTGNAGQAVLGQTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAVDYEDH  472

Query  474  GRRVKYNLGL  483
            GR+V+Y+++L
Sbjct  473  GRKVRYDFSL  482

8) Ser39006_1506 in NC_022268


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  418 bits (1572),  Expect = 6e-118, Method: Compositional matrix adjust.
 Identities = 274/508 (54%), Positives = 390/508 (77%), Gaps = 27/508 (5%)

Query  1    MKIKSNGLVKLMVPLAILGTVFIGVKSCSTDGGEKNAQANAGTAVPDLTPEDMKAMGIEG  60
            M+IK+NGL+K+++P+ I+   FIGVK+C+  +      A++  A+ +L+ +D+KA+GIEG
Sbjct  1    MQIKANGLMKVLLPVLIVVVCFIGVKACGLKDTTEPEPAKTTNALTELSQDDLKALGIEG  60

Query  61   DTPQDTLRTLVGSLKTVTKRQNQLDADNKALAEENKNLQQSNQNVDERIHQAVINAQSTA  120
            DT+ DTLRTL+G+L+ V  RQ  LD +NKAL  EN++L+  N +V+ +I +AV      A
Sbjct  61   DTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENSSVGLQISNAV-----NA  115

Query  121  DKEQSHLKGQVQALTTQIGDLMQKLKD-----KGNGGQGTMTGNPSTIGSDIPvglgldg  175
             K++++     +AL  Q   L++KL+D     K++G +  M +  S+ G+D+PVGLGLD 
Sbjct  116  AKQETN-----EALEKQKTFLLEKLNDLTGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDP  170

Query  176  ggvgSAVPSTGSDGLLWVEPKDGVAVDASGKPVGEGNTNIANGFSFATSFLDDNAITRQK  235
               +SA  +     ++W+ P+D      + K  G+++++  + F+F+TSFLDDN+++RQ+
Sbjct  171  ENASSATQG----EVIWISPQD------AKKTEGQSQSD-NDKFTFPTSFLDDNPVSRQR  219

Query  236  AELANKTNAGKTLSGNNAAEGPVDPVYTLPENSTLIGSRAMTALLGRVPIDGKVTDPYPF  295
            AE     +  + L GN +AE+   PVYTLPENSTL+GS+AMTAL+GR+PI++KVTDPYPF
Sbjct  220  AEYDRVVKNKQELDGN-GAESDTRPVYTLPENSTLVGSKAMTALIGRIPINDKVTDPYPF  278

Query  296  KVLIGKDNLTANGIDLPDVQGAIVSGTATGDWTLSCVRGSVTSITFVFSDGTVRTLPRPA  355
            KVL GKDNLTANGI+LPDV+GAIVSGTATGD  LSCVRG++ SITFVFSDG +RTLPRP 
Sbjct  279  KVLNGKDNLTANGIELPDVEGAIVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTLPRPV  338

Query  356  GQTDSQggnngnnagSIGWLSDENGIPCLSGERKSNASTYLPTlfalsassaagdalaQN  415
            ++T+++  +N+ + GSIGW+SD+NGIPC+SGERKSNASTYLPT+  L+ +S+AGDAL+QN
Sbjct  339  ANTQGNNNDNAGDRGSIGWISDNNGIPCISGERKSNASTYLPTVALLGMGSSAGDALTQN  398

Query  416  QNTAQTNAYGGVTSTLTGDAGQSVLGKAVSGGMRDMADWVKARYGQTFDAIYVPPGMKVA  475
            Q T+Q N  GGVTS+LTG+AGQ+VLG++++GG ++++DWVK RYGQTFDA+YVPPG +VA
Sbjct  399  QYTTQNNVNGGVTSALTGNAGQAVLGQTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVA  458

Query  476  VHITRQLAIDYEEKGRKVKYDFSLSQAG  503
            +HITRQLA+DYE+ GRKV+YDFSL+ +G
Sbjct  459  IHITRQLAVDYEDHGRKVRYDFSLPGTG  486

9) PMI2579 in NC_010554


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  409 bits (1540),  Expect = 2e-115, Method: Compositional matrix adjust.
 Identities = 258/494 (53%), Positives = 378/494 (77%), Gaps = 17/494 (3%)

Query  1    MKVKSNTLVKILVPSALALAVLIGIKSCQPDTPVTGSGQDNLSQSINDLDPGELKSLGIE  60
            M++K+N L+K+L+P  + +  +IG+K+C      T +   + ++++ +L  ++LK+LGIE
Sbjct  1    MQIKANGLMKVLLPVLIVVVCFIGVKACGLKDT-TEPEPAKTTNALTELSQDDLKALGIE  59

Query  61   GDTPADTLRTLIGTMKTVRDRQAELIAQNEKLLEENAQLRNRQQNVSGQIQSAVASVrqe  120
            GDT+ADTLRTLIG+++ VR RQA L  QN  L+ EN +L+  + +V+ QI +AV + +QE
Sbjct  60   GDTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQE  119

Query  121  aesqqralqqeqqTLMRRLDSLGETLTasggq----paqgsgqgDIPlglgldtggsglt  176
            ++      +     L+ +L+ L  TL + G +    ++ +S+  D+P+GLGLD   ++ +
Sbjct  120  TNEALEKQKTF---LLEKLNDLTGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDPENASSA  176

Query  177  VKDGLLWAEPQDAQPAEPGRMVNGQPAKPAFPTSFLEDNAITRQKAELDRVAKNQRTLSG  236
             ++ ++W  PQDA+ +E     +++  K +FPTSFL+DN+++RQ+AE DRV KN++ L G
Sbjct  177  TQGEVIWISPQDAKKTEGQS--QSDNDKFTFPTSFLDDNPVSRQRAEYDRVVKNKQELDG  234

Query  237  TVDGEAHTEPAYTIPENATLVGSQAMTALLGRVPIDGKVTDPYPFKVVVGKDNLTANGIE  296
              ++E++T P YT+PEN+TLVGS+AMTAL+GR+PI++KVTDPYPFKV+ GKDNLTANGIE
Sbjct  235  N-GAESDTRPVYTLPENSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNGKDNLTANGIE  293

Query  297  LPDVEGAVISGSATGDWTLSCVRGDITSITFVFTDGTIRTVPKPADRTDGGSQANSGQNA  356
            LPDVEGA++SG+ATGD  LSCVRG I SITFVF+DG IRT+P+P   T+G ++ N+G+  
Sbjct  294  LPDVEGAIVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTLPRPVANTQGNNNDNAGDR-  352

Query  357  RNNGGSLGWISDESGIPCISGERKTNAGTYLPTLFALTAAASAGDAMSQSQYTAQNNGY-  415
                GS+GWISD++GIPCISGERK+NA+TYLPT+  L  ++SAGDA++Q+QYT+QNN   
Sbjct  353  ----GSIGWISDNNGIPCISGERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQNNVNG  408

Query  416  GITSSLSGDAGKAALGSAIGGGFKDVADWVKSRYGQTFDAVYVPPGQKVAVHISRQIPVD  475
            G+TS+L+G+AG+A LG ++GGGFK+V+DWVK RYGQTFDAVYVPPG +VA+HI+RQ++VD
Sbjct  409  GVTSALTGNAGQAVLGQTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAVD  468

Query  476  YESQGRRVNYGFSL  489
            YE +GR+V Y+FSL
Sbjct  469  YEDHGRKVRYDFSL  482

10) YpsIP31758_3707 in NC_009708


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  409 bits (1539),  Expect = 2e-115, Method: Compositional matrix adjust.
 Identities = 257/506 (51%), Positives = 374/506 (74%), Gaps = 33/506 (6%)

Query  1    MKIKSNVLVKFLVPLVILGAVLIGVKTYSTGGEKSTALVNASNVLADLTPDDLKAIGIEG  60
            M+IK+N L+K L+P++I+   +IGVK+ +  +       +++N L++L+ DDLKA+GIEG
Sbjct  1    MQIKANGLMKVLLPVLIVVVCFIGVKACGLKDTTEPEPAKTTNALTELSQDDLKALGIEG  60

Query  61   DTPQDTLRTLVGSLKMVTTRQNQLDADNKALADESKTLKQADQNIDERINQAIAAYQADA  120
            DT+ DTLRTL+G+L+ V +RQ  LD +NKAL  E++ LK  + +++ +I++A+ A + ++
Sbjct  61   DTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQET  120

Query  121  NKDQGQLKGQVREMTIQIGDLMQKLKAEGWAAKHLAAGS----DIPVGLGLASGGNAVSV  176
            N    + K  + E   ++ DL   LK++G  +  +++GS    D+PVGLGL +   + + 
Sbjct  121  NEALEKQKTFLLE---KLNDLTGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDPENASSAT  177

Query  177  LDNDSLQWTENLQWSEPQDGVAIDVTGKPVGESNHNIASRNIANSFTFATSFLDDNAITR  236
                      ++ W  PQD      + K  G+S+ +       + FTF+TSFLDDN+++R
Sbjct  178  --------QGEVIWISPQD------AKKTEGQSQSD------NDKFTFPTSFLDDNPVSR  217

Query  237  QKAELANQTNYRQILNDNHAAEGSVEPVYTLPENSTLIGSRAMTALLGRVPIDGKVTDPY  296
            Q+AE     + +Q L D ++AE+   PVYTLPENSTL+GS+AMTAL+GR+PI++KVTDPY
Sbjct  218  QRAEYDRVVKNKQEL-DGNGAESDTRPVYTLPENSTLVGSKAMTALIGRIPINDKVTDPY  276

Query  297  PFKVLIGKENLTANGIDLPDIQGAIVSGSATGDWTLSCVRGSVTSITFVFTDGTVRTLPR  356
            PFKVL GK+NLTANGI+LPD++GAIVSG+ATGD  LSCVRG++ SITFVF+DG +RTLPR
Sbjct  277  PFKVLNGKDNLTANGIELPDVEGAIVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTLPR  336

Query  357  ---QTEGHQNNNNG--SSIGWLSDENGIPCLSGERKSNAATWLPTLFALSASAAAGEVLA  411
               +T+G++N+N G  +SIGW+SD+NGIPC+SGERKSNA+T LPT+  L+ +++AG+ L+
Sbjct  337  PVANTQGNNNDNAGDRGSIGWISDNNGIPCISGERKSNASTYLPTVALLGMGSSAGDALT  396

Query  412  QSQNTAQTNANGGVTSTLTGDAGQAVMGKALSGGMQAAAEWVKGRYGQTFDAIYVPPGVK  471
            Q+Q T+Q N NGGVTS+LTG+AGQAV+G++L+GG +  ++WVK RYGQTFDA+YVPPG +
Sbjct  397  QNQYTTQNNVNGGVTSALTGNAGQAVLGQTLGGGFKEVTDWVKQRYGQTFDAVYVPPGAN  456

Query  472  VAVHITRQLAIDYEEKGRKVKHDFRL  497
            VA+HITRQLA+DYE+ GRKV+ DF L
Sbjct  457  VAIHITRQLAVDYEDHGRKVRYDFSL  482

11) YE3484 in NC_008800


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  398 bits (1497),  Expect = 5e-112, Method: Compositional matrix adjust.
 Identities = 242/479 (51%), Positives = 357/479 (75%), Gaps = 24/479 (5%)

Query  5    LIGVKTYSTGGEKSTELVNASNVLADLTPDDLKAMGIEGDTPQDTLRTLVGSLKTVTTRQ  64
            +IGVK+ +  +    E  +++N L++L+ DDLKA+GIEGDT+ DTLRTL+G+L+ V +RQ
Sbjct  22   FIGVKACGLKDTTEPEPAKTTNALTELSQDDLKALGIEGDTSADTLRTLIGALRDVRARQ  81

Query  65   NQLDADNKALADESKILKQADQNIDERINQAIAAYQVDANKDQGQLKGQVQEMTIQIGDL  124
              LD +NKAL  E++ LK  + +++ +I++A+ A + ++N    + K  + E   ++ DL
Sbjct  82   AVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQETNEALEKQKTFLLE---KLNDL  138

Query  125  MQKLKDNGLAAEHIATDIPvglglagggnavsvlDNDSLQWIENLQWSEPQDGVAIDVTG  184
               LK +G  ++ ++T+ + G +++ G    +   + + Q   ++ W  PQD      + 
Sbjct  139  TGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDPENASSATQ--GEVIWISPQD------AK  190

Query  185  KPVGESNHDIASRNIANSFTFATSFLDDNAITRQKAELANQTNHRQTLNGEHVAQGSVEP  244
            K  G+S+ D       + FTF+TSFLDDN+++RQ+AE     +++Q L+G + A++   P
Sbjct  191  KTEGQSQSD------NDKFTFPTSFLDDNPVSRQRAEYDRVVKNKQELDG-NGAESDTRP  243

Query  245  VYTLPENSTLIGSRAMTALLGRVPIDGKVTDPYPFKILIGKENLTANGIDLPDIQGAIVS  304
            VYTLPENSTL+GS+AMTAL+GR+PI++KVTDPYPFK+L GK+NLTANGI+LPD++GAIVS
Sbjct  244  VYTLPENSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNGKDNLTANGIELPDVEGAIVS  303

Query  305  GSATGDWTLSCVRGSVTSITFVFTDGTVRTLPR---HTEGHQNNNNS---SIGWLSDENG  358
            G+ATGD  LSCVRG++ SITFVF+DG +RTLPR   +T+G++N+N +   SIGW+SD+NG
Sbjct  304  GTATGDMVLSCVRGTIHSITFVFSDGRIRTLPRPVANTQGNNNDNAGDRGSIGWISDNNG  363

Query  359  IPCLSGERKSNAATWLPTLFALSASAAAGEVLAQSQNTAQTNANGGVTSTLTGDAGQAVM  418
            IPC+SGERKSNA+T LPT+  L+ +++AG+ L+Q+Q T+Q N NGGVTS+LTG+AGQAV+
Sbjct  364  IPCISGERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQNNVNGGVTSALTGNAGQAVL  423

Query  419  GKALSGGMQAAAEWVKGRYGQTFDAIYVPPGVKVAVHITRQLAIDYEEKGRKVKHDFRL  477
            G++L+GG +  ++WVK RYGQTFDA+YVPPG +VA+HITRQLA+DYE+ GRKV+ DF L
Sbjct  424  GQTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKVRYDFSL  482

12) UMNK88_5036 in NC_017641


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  395 bits (1486),  Expect = 3e-111, Method: Compositional matrix adjust.
 Identities = 260/491 (53%), Positives = 374/491 (77%), Gaps = 8/491 (1%)

Query  1    MQIKSNTLvkfvvpvvvvggvfIGLKSCGDPASSSDPSAQQTQVLGTLSQEELKALGVEG  60
            MQIK+N L+K ++PV++V   FIG+K+CG   ++   +A+ T+ L  LSQ++LKALG+EG
Sbjct  1    MQIKANGLMKVLLPVLIVVVCFIGVKACGLKDTTEPEPAKTTNALTELSQDDLKALGIEG  60

Query  61   DTPEDTLRTLIGRLNQVRERQQTLDEQNSRLLKENEQLRKRGTDVSGQLNDAVAGLQKSY  120
            DT+ DTLRTLIG L +VR RQ  LDEQN  L+ EN++L+   + V+ Q+++AV + +   
Sbjct  61   DTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENSSVGLQISNAVNAAK---  117

Query  121  EEKQRQLQNEQNALMAKVQSLTEQLAQQGGSSKANTdsdiplglgldglsgspgsAVSQG  180
            +E +  L++++  L+ K++ LT  L  QG ++   + +  +      GL+  P +A S  
Sbjct  118  QETNEALEKQKTFLLEKLNDLTGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDPENASSAT  177

Query  181  ADGLMWVTPADQSQPDPRDVAGGKSGPRFPTSFLDDNPLTRQKAAYEQQVKGYSNEKqqa  240
             + ++W++P D  + + +  ++      FPTSFLDDNP++RQ+A Y++ VK   +   ++
Sbjct  178  QGEVIWISPQDAKKTEGQSQSDNDKFT-FPTSFLDDNPVSRQRAEYDRVVKNKQELDGNG  236

Query  241  tqattqaVYTLPENATLVGSRAMTALLGRVPVNGTVTDPYPFKVLIGKDNLTANGIELPD  300
            +++ T++VYTLPEN+TLVGS+AMTAL+GR+P+N+ VTDPYPFKVL GKDNLTANGIELPD
Sbjct  237  AESDTRPVYTLPENSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNGKDNLTANGIELPD  296

Query  301  VEGAVVSGTASGDWTLSCVRGQVNSITFVFADGRVRTLPAPDVngttnsnqqtkngnntg  360
            VEGA+VSGTA+GD  LSCVRG ++SITFVF+DGR+RTLP P    +    ++  N+ + G
Sbjct  297  VEGAIVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTLPRP---VANTQGNNNDNAGDRG  353

Query  361  gIGWISDEDGIPCISGTRKSNAATYLPTIFglsaagaagealsqgqYTTQNNVN-GLSST  419
            +IGWISD++GIPCISG RKSNA+TYLPT+  L+ +++AG+AL+Q QYTTQNNVN G++S+
Sbjct  354  SIGWISDNNGIPCISGERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQNNVNGGVTSA  413

Query  420  LTGSAGEAALGKAISGGMNETAEWVKQRYGQTFDAIYVPPGKRLAVHITRQLAIDYEDQG  479
            LTG+AG+A LG++++GG +E ++WVKQRYGQTFDA+YVPPG  +A+HITRQLA+DYED+G
Sbjct  414  LTGNAGQAVLGQTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAVDYEDHG  473

Query  480  RKVRYDFTLPG  490
            RKVRYDF+LPG
Sbjct  474  RKVRYDFSLPG  484

13) ECA0570 in NC_004547


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  393 bits (1477),  Expect = 2e-110, Method: Compositional matrix adjust.
 Identities = 268/508 (53%), Positives = 383/508 (76%), Gaps = 25/508 (4%)

Query  1    MQIKSNTLVKVIVPSVLAIGALIGVKSCQSPDQAQSTADTAKTTLG-LSQDELKALGVAG  59
            MQIK+N L+KV++P ++ +  +IGVK+C   D +++ +  +  +L  LSQD+LKALG+ G
Sbjct  1    MQIKANGLMKVLLPVLIVVVCFIGVKACGLKDTTEPEPAKTTNALTELSQDDLKALGIEG  60

Query  60   DTPEDTLRTVVGSLNQVRSDLGKLSQQNEDLKKQNDVLTRRSTDVSGQVNEAVSGVQQSY  119
            DT+ DTLRT++G+L +VR+  + L +QN  L  +N+ L   ++ V+ Q+++AV++ +Q  
Sbjct  61   DTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQ--  118

Query  120  DTQQKRLQDEQLRIQNKIQELTDKLANTMSNPGGHISGGSNYLGSSGHGDIPLGLGLDGM  179
            +T++  L+ ++  + +K+++LT+ L ++ ++  + +S GS     S+  D+P+GLGLD  
Sbjct  119  ETNEA-LEKQKTFLLEKLNDLTGTL-KSQGQNTDMVSTGS-----SSGTDFPVGLGLD--  169

Query  180  gsgttgtqsqgADGLIWVQPKDQKPTDPNKTSSAGMPALPQFPTSFLNDNELTRQKAAYE  239
                  + S   + +IW+ P+D K T+ +  S  +  +   FPTSFL+DN ++RQ+A Y+
Sbjct  170  ---PENASSATQGEVIWISPQDAKKTEGQSQSDNDKFT---FPTSFLDDNPVSRQRAEYD  223

Query  240  QQVKG---YSNEKNEVTAEPVYTLPENSTLIGSRAMTALLGRVPINGTVTDPYPFKVLIG  296
            + VK       +  E  + PVYTLPENSTL+GS+AMTAL+GR+PIN+ VTDPYPFKVL G
Sbjct  224  RVVKNKQELDGNGAESDTRPVYTLPENSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNG  283

Query  297  KDNLTANGVDLPDVEGAIVSGTASGDWTLSCVRGQVNSITFVFSDGTVRTLPRanansng  356
            KDNLTANG++LPDVEGAIVSGTA+GD  LSCVRG ++SITFVFSDG +RTLPR+ AN++G
Sbjct  284  KDNLTANGIELPDVEGAIVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTLPRPVANTQG  343

Query  357  sssgndqgasganggIGWISDEAGIPCISGERKSNASTYLPTIFalsagsgaasalsQNQ  416
            ++++N  + ++    IGWISD+ GIPCISGERKSNASTYLPT+  L+ GS+A+ AL+QNQ
Sbjct  344  NNNDNAGDRGS----IGWISDNNGIPCISGERKSNASTYLPTVALLGMGSSAGDALTQNQ  399

Query  417  QTTQANGYGGMTSSLTGDAGQAVLGKALAGGLNETTDWVKQRYGQTFDAIYVPPGMRLAV  476
             TTQ N  GG+TS+LTG+AGQAVLG++L+GG++E TDWVKQRYGQTFDA+YVPPG  +A+
Sbjct  400  YTTQNNVNGGVTSALTGNAGQAVLGQTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAI  459

Query  477  HITKQLAIDYEDKGRKVRYDFSLPADGG  504
            HIT+QLA+DYED GRKVRYDFSLP+ GG
Sbjct  460  HITRQLAVDYEDHGRKVRYDFSLPGTGG  487

14) SPAB_05384 in NC_010102


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  387 bits (1454),  Expect = 1e-108, Method: Compositional matrix adjust.
 Identities = 258/480 (54%), Positives = 357/480 (75%), Gaps = 23/480 (4%)

Query  28   SCTDKNDKNEAGQKTSNVALKDLTPEDLKALGVEGDTAQDTLRTLVGSYRKVQGRLDSLE  87
            +C  K+  +    KT+N AL +L+ +DLKALG+EGDT+ DTLRTL+G+ R V++R   L+
Sbjct  27   ACGLKDTTEPEPAKTTN-ALTELSQDDLKALGIEGDTSADTLRTLIGALRDVRARQAVLD  85

Query  88   SDNKTLADENKELKKNNTNVDQQISQAVGQVRSEEAQKRAQLSSQVTDLSSQVNQLLDQL  147
             +NK+L  EN+ LK +N++V+ QIS+AV   + E  +    L  Q T L  ++N+L + L
Sbjct  86   EQNKALISENNKLKGENSSVGLQISNAVNAAKQETNE---ALEKQKTFLLEKLNDLTGTL  142

Query  148  KNGSSGLTAGNKGNAAGSDIPVGLGYDNGLTGGAGNISQTDGNGLQWVEPKDGIATDANG  207
            K+ +      + G+++G+D+PVGLG D      + N S +    + W+ P+D+  T++++
Sbjct  143  KSQGQNTDMVSTGSSSGTDFPVGLGLD------PENASSATQGEVIWISPQDAKKTEGQS  196

Query  208  RPVSDKNSNNATGFSFATSFGAAGDAARQATS---AVSTTVQNNIPGSEKNAAPVYTLPE  264
            ++ +DK       F+F+TSF      +RQ +     V    + +  G+E ++ PVYTLPE
Sbjct  197  QSDNDK-------FTFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNGAESDTRPVYTLPE  249

Query  265  NSTLVGSRAMTALLGRIPIDGKVTDPYPFKVMIGKDNLTANGIELPDVQGAIVSGTATGD  324
            NSTLVGS+AMTAL+GRIPI++KVTDPYPFKV+ GKDNLTANGIELPDV+GAIVSGTATGD
Sbjct  250  NSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNGKDNLTANGIELPDVEGAIVSGTATGD  309

Query  325  WTLSCVRGAITSITFVFTDGTVRTLPSPEgqgsnggnqnsqggnnssIGWLSDDNGIPCI  384
              LSCVRG+I SITFVF+DG +RTLP P   ++  GN+N ++G+ +SIGW+SD+NGIPCI
Sbjct  310  MVLSCVRGTIHSITFVFSDGRIRTLPRP--VANTQGNNNDNAGDRGSIGWISDNNGIPCI  367

Query  385  SGTRKSNASTYLPTIaalaaasaagdavaENQNTSQTNGYGGVTSTLTGDAGQAVLGKAL  444
            SG RKSNASTYLPT+A L+ +S+AGDA+++NQ T+Q N  GGVTS+LTG+AGQAVLG++L
Sbjct  368  SGERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQNNVNGGVTSALTGNAGQAVLGQTL  427

Query  445  SGGMRETVDWVKARYGQTFDAIYVPPGQKVALHITRQLAIDYEEKGRKVKYDDFSLAGSS  504
            +GG +E  DWVK RYGQTFDA+YVPPG +VA+HITRQLA+DYE+ GRKV+Y DFSL+G++
Sbjct  428  GGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKVRY-DFSLPGTG  486

15) NT01EI_0345 in NC_012779


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  387 bits (1456),  Expect = 8e-109, Method: Compositional matrix adjust.
 Identities = 271/500 (55%), Positives = 390/500 (78%), Gaps = 21/500 (4%)

Query  1    MQIKSNAMVKFIVPavvvaglvvglKSCKGERLPENAENASGDVTTVLKNLSQDELKALG  60
            MQIK+N+++K ++P ++V    +G+K+C    L + +E  ++  T  L +LSQD+LKALG
Sbjct  1    MQIKANGLMKVLLPVLIVVVCFIGVKACG---LKDTTEPEPAKTTNALTELSQDDLKALG  57

Query  61   VEGDTPEDTLRMLIGRLNDVRDRQKTLDKQNTDLLKENEQLRKRGTNVSGQVDEAVQGLR  120
            +EGDT+ DTLR LIG L DVR RQ  LD QN  L+ EN++L+   ++V+ Q+ +AV++ +
Sbjct  58   IEGDTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENSSVGLQISNAVNAAK  117

Query  121  EEYDKRQQQLQNEQTSLLEKVQTLSEQLKTTVSSS--AGAKQASDSDIPlglgldglggR  178
            +E    ++ L++++T LLEK++ L+  LK+   ++   ++  +S++D+P+GLGLD   + 
Sbjct  118  QE---TNEALEKQKTFLLEKLNDLTGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDPENAS  174

Query  179  TRGIATRGDDGLMWVTPDDQKDVDPRDAASGKASPQFPTSFLDSNPLTRQKAAYEQQVKG  238
            +   AT+G+  ++W++P+D K  +  ++ S++    FPTSFLD NP++RQ+A Y++ VK 
Sbjct  175  S---ATQGE--VIWISPQDAKKTEG-QSQSDNDKFTFPTSFLDDNPVSRQRAEYDRVVKN  228

Query  239  HT--GEKGAQENAEPVYTLPENSTLVGSRAMTALLGRIPLNGTVTDPYPFKVLIGKDNLT  296
                + +GA+ ++ PVYTLPENSTLVGS+AMTAL+GRIP+N+ VTDPYPFKVL GKDNLT
Sbjct  229  KQELDGNGAESDTRPVYTLPENSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNGKDNLT  288

Query  297  ANGIELPDVEGAIVSGSASGDWTLSCVRGQVNSITFVFADGTVRTVPQPEAsgkstgngn  356
            ANGIELPDVEGAIVSG+A+GD  LSCVRG ++SITFVF+DG +RT+P+P A      +GN
Sbjct  289  ANGIELPDVEGAIVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTLPRPVA----NTQGN  344

Query  357  tqnktgtdggigwisdddgiPCISGTRKSNASTYLPTIFALSaagaageafgegQYTTQN  416
             ++++G  G+IGWISD++GIPCISG RKSNASTYLPT+  L+ +++AG+A+ + QYTTQN
Sbjct  345  NNDNAGDRGSIGWISDNNGIPCISGERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQN  404

Query  417  NVN-GISSTLTGSAGEAALGKALSGGMSETTDWVKQRYGQTFDAIYVPPGAKLAVHITRQ  475
            NVN G++S+LTG+AG+A LG++L+GG  E TDWVKQRYGQTFDA+YVPPGA++A+HITRQ
Sbjct  405  NVNGGVTSALTGNAGQAVLGQTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQ  464

Query  476  LAIDYEDNGRRVRYDFTLPG  495
            LA+DYED+GR+VRYDF+LPG
Sbjct  465  LAVDYEDHGRKVRYDFSLPG  484

16) ECED1_3564 in NC_011745


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  385 bits (1447),  Expect = 4e-108, Method: Compositional matrix adjust.
 Identities = 236/474 (50%), Positives = 356/474 (76%), Gaps = 17/474 (3%)

Query  25   MKSCKTQENV-ADRGEQARTLSGLSSEELRALGVEGDTPEDTLRTLVARMNQVRDNQRTL  83
            +K+C  ++   ++ +  + +L+ LS ++L+ALG+EGDT+ DTLRTL++ + +VR  Q  L
Sbjct  25   VKACGLKDTTEPEPAKTTNALTELSQDDLKALGIEGDTSADTLRTLIGALRDVRARQAVL  84

Query  84   EKQNSQLLKDNEQLRRRSTDVSGQVNDAVAGVQKTYEQKQRKLQEQQHSLMSQIDAMKDQ  143
            + QN  L+ +N++L+  ++ V+ Q+++AV + +   ++ +  L+ Q+  L+ +++ + + 
Sbjct  85   DEQNKALISENNKLKGENSSVGLQISNAVNAAK---QETNEALEKQKTFLLEKLNDLTGT  141

Query  144  LS----RAETLSRRQESdippglgldagggsgvviTQGADGLMWVSPADQSQDDPLSSSG  199
            L      ++ +S    S+    +GL+ +  ++   TQG   ++W+SP D  + +   S +
Sbjct  142  LKSQGQNTDMVSTGSSSGTDFPVGLGLDPENASSATQGE--VIWISPQDAKKTEG-QSQS  198

Query  200  SKGGPRFPTSFLEDNALSRQKAEYEQQVKG---YSNEQQRATTQAVYTLPENSTLTGSRA  256
             ++   FPTSFL+DN++SRQ+AEY++ VK       +   + T++VYTLPENSTL GS+A
Sbjct  199  DNDKFTFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNGAESDTRPVYTLPENSTLVGSKA  258

Query  257  MTALLGRVPINGTVTDPYPFKILVGRDNLTANGIELPDVEGAIVSGTASGDWTLSCVRGQ  316
            MTAL+GR+PIN+ VTDPYPFK+L G+DNLTANGIELPDVEGAIVSGTA+GD  LSCVRG 
Sbjct  259  MTALIGRIPINDKVTDPYPFKVLNGKDNLTANGIELPDVEGAIVSGTATGDMVLSCVRGT  318

Query  317  VNSITFVFADGTVRTLPSPDVNGTTNSNQQAKGNGTGGIGWISDEDGIPCISGTRKSNAS  376
            ++SITFVF+DG +RTLP P  N  T++N++ ++ + G+IGWISD++GIPCISG RKSNAS
Sbjct  319  IHSITFVFSDGRIRTLPRPVAN--TQGNNNDNAGDRGSIGWISDNNGIPCISGERKSNAS  376

Query  377  SYLPTIFalsaagaagdalsEGQYTSQNNVN-GITSTLTGSAGQAALGKALSGGMNETAD  435
            +YLPT+  L+ +++AGDAL++ QYT+QNNVN G+TS+LTG+AGQA LG++L+GG +E +D
Sbjct  377  TYLPTVALLGMGSSAGDALTQNQYTTQNNVNGGVTSALTGNAGQAVLGQTLGGGFKEVTD  436

Query  436  WVRQRYGQTFDAIYVPPGKALAVHITRQLAIDYEEQGRRVRYDFALPGEANDHG  489
            WV+QRYGQTFDA+YVPPG  +A+HITRQLA+DYE++GR+VRYDF+LPG + + G
Sbjct  437  WVKQRYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKVRYDFSLPGTGGHYG  490

17) EpC_31950 in NC_012214


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  381 bits (1431),  Expect = 8e-107, Method: Compositional matrix adjust.
 Identities = 250/482 (52%), Positives = 351/482 (73%), Gaps = 22/482 (4%)

Query  24   LGVKSCAESSSQTAGGQKTSNVALKDLTPEDLKALGIEGDTPQDTLRTIVGNFRKVQERL  83
            +GVK+C+   +  +   KT+N AL +L+ +DLKALGIEGDT+ DTLRT++G +R V+ R 
Sbjct  23   IGVKACGLKDTTEPEPAKTTN-ALTELSQDDLKALGIEGDTSADTLRTLIGALRDVRARQ  81

Query  84   DGIADDNKKLSDENKALKKTNGNVDRQISQVVDNARAEEAQKRSQLSAQVNDLSTQVDRL  143
              + ++NK L  EN+ LK  N++V+ QIS+ V+ A+ E  +    L  Q   L  +++ L
Sbjct  82   AVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQETNE---ALEKQKTFLLEKLNDL  138

Query  144  MEQLQNGASGAAMVAKNSISGSDIPVGMGYDNGSGVSASTPPADGMQWVEPKDGIPTDAS  203
               L++ +  + MV+  S SG+D+PVG+G D  +   AS++  + + W+ P+D+  T+  
Sbjct  139  TGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDPEN---ASSATQGEVIWISPQDAKKTE--  193

Query  204  GRPVSGSNGNNATGFAFASTFDDVSDAGKTVNAATSAVQKTL----SEAEKATDPVYTLP  259
                 G + ++   F+F+++F D +  ++        V++      + AE  T PVYTLP
Sbjct  194  -----GQSQSDNDKFTFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNGAESDTRPVYTLP  248

Query  260  ENATLVGSQAMTALLGRVPVDGKVTDPYPFKVMVGKDNLTANGIELPDVQGAIVSGTATG  319
            EN+TLVGS+AMTAL+GR+P+++KVTDPYPFKV+ GKDNLTANGIELPDV+GAIVSGTATG
Sbjct  249  ENSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNGKDNLTANGIELPDVEGAIVSGTATG  308

Query  320  DWTLSCVRGAITSITFVFTDGTVRTVPSPngqngsganqngqggngnnssIGWLSDDNGI  379
            D  LSCVRG+I SITFVF+DG +RT+P P ++  +  N+N+ +  +    IGW+SD+NGI
Sbjct  309  DMVLSCVRGTIHSITFVFSDGRIRTLPRPVANTQGNNNDNAGDRGS----IGWISDNNGI  364

Query  380  PCISGTRKSNASTYLPTIaalaaagaagdalaQNQNTTQTNGYGGVTSSLTGDAGQAVLG  439
            PCISG RKSNASTYLPT+A L+ +++AGDAL+QNQ TTQ N  GGVTS+LTG+AGQAVLG
Sbjct  365  PCISGERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQNNVNGGVTSALTGNAGQAVLG  424

Query  440  KAFSGGMRETVDWVKARYGQTFDAIYVPPGQKVALHITRQLAIDYEEKGRKVKYDFSLAG  499
            ++++GG +E  DWVK RYGQTFDA+YVPPG +VA+HITRQLA+DYE+ GRKV+YDFSL+G
Sbjct  425  QTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKVRYDFSLPG  484

Query  500  SG  501
            +G
Sbjct  485  TG  486

18) EJP617_06500 in NC_017445


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  379 bits (1426),  Expect = 2e-106, Method: Compositional matrix adjust.
 Identities = 250/482 (52%), Positives = 350/482 (73%), Gaps = 22/482 (4%)

Query  24   LGVKSCAESSSQTAGGQKTSNVALKDLTPEDLKALGIEGDTPQDTLRTIVGNFRKVQERL  83
            +GVK+C+   +  +   KT+N AL +L+ +DLKALGIEGDT+ DTLRT++G +R V+ R 
Sbjct  23   IGVKACGLKDTTEPEPAKTTN-ALTELSQDDLKALGIEGDTSADTLRTLIGALRDVRARQ  81

Query  84   DGIADDNKKLSDENKALKKTNGNVDRQISQVVDNARAEEALKRSQLGAQVTDLSTQVDRL  143
              + ++NK L  EN+ LK  N++V+ QIS+ V+ A+ E       L  Q T L  +++ L
Sbjct  82   AVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQE---TNEALEKQKTFLLEKLNDL  138

Query  144  MEQLRNGASGAAMVGKNSISGSDIPVGMGYDNGSGVSASTPPADGMQWVEPKDGIPTDAS  203
               L++ +  + MV+  S SG+D+PVG+G D  +   AS++  + + W+ P+D+  T+  
Sbjct  139  TGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDPEN---ASSATQGEVIWISPQDAKKTE--  193

Query  204  GRPVSGSNGNNATGFAFASTFDDVSDAGKTVNAATSAVQKTL----SEAEKATDPVYTLP  259
                 G + ++   F+F+++F D +  ++        V++      + AE  T PVYTLP
Sbjct  194  -----GQSQSDNDKFTFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNGAESDTRPVYTLP  248

Query  260  ENATLVGSQAMTALLGRVPVDGKVTDPYPFKVMVGKDNLTANGIELPDVQGAIVSGTATG  319
            EN+TLVGS+AMTAL+GR+P+++KVTDPYPFKV+ GKDNLTANGIELPDV+GAIVSGTATG
Sbjct  249  ENSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNGKDNLTANGIELPDVEGAIVSGTATG  308

Query  320  DWTLSCVRGAITTITFVFTDGTVRTVPSPngqngsganqngqggngnnssIGWLSDDNGI  379
            D  LSCVRG+I +ITFVF+DG +RT+P P ++  +  N+N+ +  +    IGW+SD+NGI
Sbjct  309  DMVLSCVRGTIHSITFVFSDGRIRTLPRPVANTQGNNNDNAGDRGS----IGWISDNNGI  364

Query  380  PCISGTRKSNASTYLPTIaalaaagaagdalaQNQNTTQTNGYGGVTSSLTGDAGQAVLG  439
            PCISG RKSNASTYLPT+A L+ +++AGDAL+QNQ TTQ N  GGVTS+LTG+AGQAVLG
Sbjct  365  PCISGERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQNNVNGGVTSALTGNAGQAVLG  424

Query  440  KAFSGGMHETVDWVKARYGQTFDAIYVPPGQKVALHITRQLAIDYEEKGRKVKYDFSLAG  499
            ++++GG  E  DWVK RYGQTFDA+YVPPG +VA+HITRQLA+DYE+ GRKV+YDFSL+G
Sbjct  425  QTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKVRYDFSLPG  484

Query  500  SG  501
            +G
Sbjct  485  TG  486

19) Spro_0335 in NC_009832


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  377 bits (1418),  Expect = 8e-106, Method: Compositional matrix adjust.
 Identities = 253/501 (51%), Positives = 382/501 (77%), Gaps = 20/501 (3%)

Query  3    DVKSNMLPKVIVIGVLAASIVVGLKAC--KDDKTPEKPQQAHNVLANMSPEELRALGVEG  60
            ++K+N L KV++  ++     +G+KAC  KD   PE P ++ N L+++S ++L+ALG+EG
Sbjct  2    QIKANGLMKVLLPVLIVVVCFIGVKACGLKDTTEPE-PAKTTNALTELSQDDLKALGIEG  60

Query  61   DTPEDtlrtlvgtlrttrtQQAELQSNIDKVLKENEALRKRNTNVSGQVNEAVAGYqkqa  120
            DT+ DTLRTL+G+LR  R++QA L+ +   ++ EN+ L+  N++V+ Q+++AV +     
Sbjct  61   DTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENSSVGLQISNAVNA---AK  117

Query  121  qqrqqqlqqeqqTLMGKIQTLTEQLAG---NKDKAKSDSDIPlglgldgmgagegSAAPG  177
            Q+ ++ L++++  L+ K++ LT  L +   N D   ++S    ++ ++     E ++++ 
Sbjct  118  QETNEALEKQKTFLLEKLNDLTGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDPENASSAT  177

Query  178  QDGLMWVGPKDMKEPDPRNPNSAKDGPQFPTSFLSDNAITRQKAAYEQQVKGRT--NEKG  235
            Q+ ++W++P+D K  + + ++S +D   FPTSFL DN+++RQ+A Y++ VK +   + +G
Sbjct  178  QGEVIWISPQDAKKTEGQ-SQSDNDKFTFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNG  236

Query  236  AEENAEPVFTLPENSTLVGSRSMTALLGRVPINGTVTDPYPFKLMIGKDNLTANGIELPD  295
            AE ++ PV+TLPENSTLVGS++MTAL+GR+PIN+ VTDPYPFK++ GKDNLTANGIELPD
Sbjct  237  AESDTRPVYTLPENSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNGKDNLTANGIELPD  296

Query  296  VEGAIVSGTASGDWTLSCVRGQVNSITFVFADGTVRTLPHPDTNMKAnsnnnsgnsgKDV  355
            VEGAIVSGTA+GD  LSCVRG ++SITFVF+DG +RTLP+P +N ++       N+  + 
Sbjct  297  VEGAIVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTLPRPVANTQG-------NNNDNA  349

Query  356  STTAGIGWISDDNGIPCIGGERKSNASTYLPTIaalsaasaaGEGISQGQYTTQNNVN-G  414
            +  ++IGWISD+NGIPCI+GERKSNASTYLPT+A L+ +S+AG++++Q QYTTQNNVN G
Sbjct  350  GDRGSIGWISDNNGIPCISGERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQNNVNGG  409

Query  415  ITATMTGNAGQAVLGKALSGGMKETADWVRERYGMMFDAIYVPPGQKLAVHITRQLAIDF  474
            +T+++TGNAGQAVLG++L+GG KE +DWV++RYG  FDA+YVPPG ++A+HITRQLA+D+
Sbjct  410  VTSALTGNAGQAVLGQTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAVDY  469

Query  475  ETQGRKVRYDFSLPGEDGSTG  495
            E +GRKVRYDFSLPG +G  G
Sbjct  470  EDHGRKVRYDFSLPGTGGHYG  490

20) ECL_00442 in NC_014121


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  377 bits (1418),  Expect = 9e-106, Method: Compositional matrix adjust.
 Identities = 257/475 (55%), Positives = 352/475 (75%), Gaps = 24/475 (5%)

Query  34   NQTAAPHTASNV-ALKDLSPEDLKALGIEGDTPQDTLRTVVGNFRKVQDRLDTLADDNKK  92
            ++T+ P+ A    AL +LS +DLKALGIEGDT+ DTLRT++G +R V+ R   L ++NK 
Sbjct  31   KDTTEPEPAKTTNALTELSQDDLKALGIEGDTSADTLRTLIGALRDVRARQAVLDEQNKA  90

Query  93   LSDENKALKTTNSNVDTQINQAVSNARAEEAQKRQQLSAEVTDLSTQVKQLMDQLRNGGA  152
            L  EN+ LK  NS+V+ QI++AV+ A+ E     + L  + T L  ++++L + L++ G 
Sbjct  91   LISENNKLKGENSSVGLQISNAVNAAKQE---TNEALEKQKTFLLEKLNDLTGTLKSQGQ  147

Query  153  GTE-SGKNSGSGSDIPIGLGYDsglnsgaagvsssaDGLHWVEPKDGVPVDASGRPVTDS  211
             T+  +  S+SG+D+P+GLG D+   S+A+      + + W+ P+D+   +  G++ +D+
Sbjct  148  NTDMVSTGSSSGTDFPVGLGLDPENASSATQ-----GEVIWISPQDAKKTE--GQSQSDN  200

Query  212  NKNNATGFSFATSFADTADAGKQAVG-NTTAAVQTQL--TDAQKATDPVYTLPENSTLVG  268
            +K     F+F+TSF D    ++Q    +     + +L   +A+  T PVYTLPENSTLVG
Sbjct  201  DK-----FTFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNGAESDTRPVYTLPENSTLVG  255

Query  269  SRAMTALLGRIPVDGKVTDPYPFKVMIGKDNLTANGIELPDVQGAIVSGTATGDWTLSCV  328
            S+AMTAL+GRIP+++KVTDPYPFKV+ GKDNLTANGIELPDV+GAIVSGTATGD  LSCV
Sbjct  256  SKAMTALIGRIPINDKVTDPYPFKVLNGKDNLTANGIELPDVEGAIVSGTATGDMVLSCV  315

Query  329  RGSITSITFVFSDGTVRTLPSPDgqgqngnssnqnsqggnsssIGWLSDDNGIPCISGTR  388
            RG+I SITFVFSDG +RTLP P         +N+N ++G+ +SIGW+SD+NGIPCISG R
Sbjct  316  RGTIHSITFVFSDGRIRTLPRP----VANTQGNNNDNAGDRGSIGWISDNNGIPCISGER  371

Query  389  KSNASTYLPTIaalaaasaagdavaENQSTGQTNAYGGVTSTLTGNAGQAVLGKALSGGM  448
            KSNASTYLPT+A L+ +S+AGDA+++NQ T Q N  GGVTS+LTGNAGQAVLG++L+GG 
Sbjct  372  KSNASTYLPTVALLGMGSSAGDALTQNQYTTQNNVNGGVTSALTGNAGQAVLGQTLGGGF  431

Query  449  RETVDWVKARYGQTFDAIYVPPGQTVALHITRQLAIDYEEKGRRVKYDFSLAGSG  503
            +E  DWVK RYGQTFDA+YVPPG  VA+HITRQLA+DYE+ GR+V+YDFSL+G+G
Sbjct  432  KEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKVRYDFSLPGTG  486

21) EPYR_03450 in NC_017390


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  376 bits (1414),  Expect = 2e-105, Method: Compositional matrix adjust.
 Identities = 248/482 (52%), Positives = 348/482 (73%), Gaps = 22/482 (4%)

Query  24   LGVKSCAESSSQTAGGQKTSNVALKDLTPEDLKALGIEGDTPQDTLRTIVGNFRKVQERL  83
            +GVK+C+   +  +   KT+N AL +L+ +DLKALGIEGDT+ DTLRT++G +R V+ R 
Sbjct  23   IGVKACGLKDTTEPEPAKTTN-ALTELSQDDLKALGIEGDTSADTLRTLIGALRDVRARQ  81

Query  84   DGIADXNKKLSDENKALKKTNGNVDRQISQVVDNARAEEAQKRSQLSAQVNDLSTQVDRL  143
              + + NK L  EN+ LK  N++V+ QIS+ V+ A+ E  +    L  Q   L  +++ L
Sbjct  82   AVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQETNE---ALEKQKTFLLEKLNDL  138

Query  144  MEQLQNGASGAAMVAKNSISGSDIPVGMGYDNGSGVSASTPPADGMQWVEPKDGIPTDAS  203
               L++ +  + MV+  S SG+D+PVG+G D  +   AS++  + + W+ P+D+  T+  
Sbjct  139  TGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDPEN---ASSATQGEVIWISPQDAKKTE--  193

Query  204  GRPVSGSNGNNATGFAFASTFXDVSDAGKTVNAATSAVQKTL----SEAEKATDPVYTLP  259
                 G + ++   F+F+++F D +  ++        V++      + AE  T PVYTLP
Sbjct  194  -----GQSQSDNDKFTFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNGAESDTRPVYTLP  248

Query  260  ENATLVGSQAMTALLGRVPVDGKVTDPYPFKVMVGKDNLTANGIELPDVQGAIVSGTATG  319
            EN+TLVGS+AMTAL+GR+P+++KVTDPYPFKV+ GKDNLTANGIELPDV+GAIVSGTATG
Sbjct  249  ENSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNGKDNLTANGIELPDVEGAIVSGTATG  308

Query  320  DWTLSCVRGAITSITFVFTDGTVRTVPSPngqngsganqngqggngnnssIGWLSXDNGI  379
            D  LSCVRG+I SITFVF+DG +RT+P P ++  +  N+N+ +  +    IGW+S +NGI
Sbjct  309  DMVLSCVRGTIHSITFVFSDGRIRTLPRPVANTQGNNNDNAGDRGS----IGWISDNNGI  364

Query  380  PCISGTRKSNASTYLPTIaalaaagaagdalaQNQNTTQTNGYGGVTSSLTGDAGQAVXG  439
            PCISG RKSNASTYLPT+A L+ +++AGDAL+QNQ TTQ N  GGVTS+LTG+AGQAV G
Sbjct  365  PCISGERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQNNVNGGVTSALTGNAGQAVLG  424

Query  440  KAFSGGMRETVDWVKARYGQTFDAIYVPPGQKVALHITRQLAIDYEEKGRKVKYDFSLAG  499
            ++++GG +E  DWVK RYGQTFDA+YVPPG +VA+HITRQLA+DYE+ GRKV+YDFSL+G
Sbjct  425  QTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKVRYDFSLPG  484

Query  500  SG  501
            +G
Sbjct  485  TG  486

22) Spro_4088 in NC_009832


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  373 bits (1401),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 250/501 (50%), Positives = 379/501 (76%), Gaps = 20/501 (3%)

Query  3    DVKSNMLPKVIVIGVLAASIVVGLKAC--KDDKTPEKPQQAHNVLANMSPEELRALGVEG  60
            ++K+N L KV++  ++     +G+KAC  KD   PE P ++ N L+++S ++L+ALG+EG
Sbjct  2    QIKANGLMKVLLPVLIVVVCFIGVKACGLKDTTEPE-PAKTTNALTELSQDDLKALGIEG  60

Query  61   DTPEDtlrtlvgtlrttrtQQAELQSNIDKVLKENEALRKRNTNVSGQVNEAVAGYqkqa  120
            DT+ DTLRTL+G+LR  R++QA L+ +   ++ EN+ L+  N++V+ Q+++AV +     
Sbjct  61   DTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENSSVGLQISNAVNA---AK  117

Query  121  qqrqqqlqqeqqTLMGKIQTLTEQLAG---NKDKAKSDSDIPlglgldgmgagegSAAPG  177
            Q+ ++ L++++  L+ K++ LT  L +   N D   ++S    ++ ++     E ++++ 
Sbjct  118  QETNEALEKQKTFLLEKLNDLTGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDPENASSAT  177

Query  178  QDGLMWVGPKDMKEPDPRNPNSVKDGPQFPTSFLSDNAITRQKAAYEQQVKGHT--NEKG  235
            Q+ ++W++P+D K  + ++ +  +D   FPTSFL DN+++RQ+A Y++ VK     + +G
Sbjct  178  QGEVIWISPQDAKKTEGQSQSD-NDKFTFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNG  236

Query  236  AEENAEPVFTLPENSTLVGSRSMTALLGRVPINGTVTDPYPFKLMIGKDNLTANGIELPD  295
            AE ++ PV+TLPENSTLVGS++MTAL+GR+PIN+ VTDPYPFK++ GKDNLTANGIELPD
Sbjct  237  AESDTRPVYTLPENSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNGKDNLTANGIELPD  296

Query  296  VEGAIVSGTASGDWTLSCVRGQVNSITFVFADGTVRTLPHPDTNMKAnsnnnsgnsgKDV  355
            VEGAIVSGTA+GD  LSCVRG ++SITFVF+DG +RTLP+P +N ++       N+  + 
Sbjct  297  VEGAIVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTLPRPVANTQG-------NNNDNA  349

Query  356  STTAGIGWISDDNGIPCIGGERKSNASTYLPTIaalsaasaaGEGISQGQYTTQNNVN-G  414
            +  ++IGWISD+NGIPCI+GERKSNASTYLPT+A L+ +S+AG++++Q QYTTQNNVN G
Sbjct  350  GDRGSIGWISDNNGIPCISGERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQNNVNGG  409

Query  415  ISATMTGNAGQAVLGKALSGGMKETADWVRERYGMMFDAIYVPPGQKLAVHITRQLAIDF  474
            +++++TGNAGQAVLG++L+GG KE +DWV++RYG  FDA+YVPPG ++A+HITRQLA+D+
Sbjct  410  VTSALTGNAGQAVLGQTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAVDY  469

Query  475  ETKGRKVRYDFNLPGEDGSTG  495
            E  GRKVRYDF+LPG +G  G
Sbjct  470  EDHGRKVRYDFSLPGTGGHYG  490

23) EpC_30330 in NC_012214


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  372 bits (1398),  Expect = 3e-104, Method: Compositional matrix adjust.
 Identities = 250/482 (52%), Positives = 348/482 (73%), Gaps = 25/482 (5%)

Query  24   LGVKSCAESSSQTAGGQKTSNVALKDLTPEDLKALGIEGDTPQDTLRTIVGNFRKVQERL  83
            +GVK+C+   +  +   KT+N AL +L+ +DLKALGIEGDT+ DTLRT++G +R V+ R 
Sbjct  23   IGVKACGLKDTTEPEPAKTTN-ALTELSQDDLKALGIEGDTSADTLRTLIGALRDVRARQ  81

Query  84   DGIADDNKKLSDENKALKKTNGNVDRQISQVVDNARAEDTLKRSQLGAQVTDLSTQVDRL  143
              + ++NK L  EN+ LK  N++V+ QIS+ V+ A+ E       L  Q T L  +++ L
Sbjct  82   AVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQETN---EALEKQKTFLLEKLNDL  138

Query  144  MEQLRNGASGAAMVGKNSISGSDIPVGMGYDNGSGVNDSTPPADGMQWVEPKDGIPTDAS  203
               L++ +  + MV+  S SG+D+PVG+G D     N S++  + + W+ P+D+  T+  
Sbjct  139  TGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDPE---NASSATQGEVIWISPQDAKKTE--  193

Query  204  GRPVSGSNGNNATGFAFASTFDDVSDAGKTVNAATSAVQKTL----SEAEKTTDPVYTLP  259
                 G + ++   F+F+++F D +  ++        V++      + AE  T PVYTLP
Sbjct  194  -----GQSQSDNDKFTFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNGAESDTRPVYTLP  248

Query  260  ENATLVGSQAMTALLGRVPVDGKVTDPYPFKVMVGKDNLTANGIELPDVQGAIVSGTATG  319
            EN+TLVGS+AMTAL+GR+P+++KVTDPYPFKV+ GKDNLTANGIELPDV+GAIVSGTATG
Sbjct  249  ENSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNGKDNLTANGIELPDVEGAIVSGTATG  308

Query  320  DWTLSCVRGAITSITFVFTDG---TVPSPngqngsganqngqggngnnssIGWLSDDNGI  376
            D  LSCVRG+I SITFVF+DG   T+P P ++  +  N+N+ +  +    IGW+SD+NGI
Sbjct  309  DMVLSCVRGTIHSITFVFSDGRIRTLPRPVANTQGNNNDNAGDRGS----IGWISDNNGI  364

Query  377  PCISGTRKSNASTYLPTIaalaaagaagdalaQNQNTTQTNGYGGVTSSLTGDAGQAVLG  436
            PCISG RKSNASTYLPT+A L+ +++AGDAL+QNQ TTQ N  GGVTS+LTG+AGQAVLG
Sbjct  365  PCISGERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQNNVNGGVTSALTGNAGQAVLG  424

Query  437  KAFSGGMRETVDWVKARYGQTFDAIYVPPGQKVALHITRQLAIDYEEKGRKVKYDFSLAG  496
            ++++GG +E  DWVK RYGQTFDA+YVPPG +VA+HITRQLA+DYE+ GRKV+YDFSL+G
Sbjct  425  QTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKVRYDFSLPG  484

Query  497  SG  498
            +G
Sbjct  485  TG  486

24) NRG857_20900 in NC_017634


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  372 bits (1397),  Expect = 4e-104, Method: Compositional matrix adjust.
 Identities = 249/494 (51%), Positives = 377/494 (77%), Gaps = 23/494 (4%)

Query  1    MQIKSNTLLKVIVPVVLLSAVMIGVKSCG--GPKQTPDSADNTTVADLTQEELRILGIEG  58
            MQIK+N L+KV++PV+++    IGVK+CG  +  +   +    ++++L+Q++L+ LGIEG
Sbjct  1    MQIKANGLMKVLLPVLIVVVCFIGVKACGLKDTTEPEPAKTTNALTELSQDDLKALGIEG  60

Query  59   DTPQDTLRTLVGRIKTIQTNQENLEKQNVALAEENARLQNKGNNVDGRINDAVNAAKQES  118
            DT+ DTLRTL+G ++ +++ Q  L+ QN AL  EN +L+   ++V+ +I++AVNAAKQE+
Sbjct  61   DTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQET  120

Query  119  Tqaqqklqa-eqqrlaGLLESLKNTVPGPG-AGSNTSAGSDLPVGLGLEDAGQAETVAQG  176
             +A +K ++   ++L +L  +LK+     +  ++ +S+G+D+PVGLGL+    + +    
Sbjct  121  NEALEKQKTFLLEKLNDLTGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDPENASSATQGE  180

Query  177  TLWIEPQDGVQLDRNGKPVtgaaaatngtgtFQFPTAFGGLNDNAITRQKAELDRNAKNQ  236
             +WI PQD+ + + ++++         + + F FPT+F  L+DN+++RQ+AE DR  KN+
Sbjct  181  VIWISPQDAKKTEGQSQS---------DNDKFTFPTSF--LDDNPVSRQRAEYDRVVKNK  229

Query  237  QAIEETDL-----PVYTLPENSTLVGSQAMTALLGRVPIDGKVTDPYPFKVLIGKENLTA  291
            Q ++  +      PVYTLPENSTLVGS+AMTAL+GR+PI++KVTDPYPFKVL GK+NLTA
Sbjct  230  QELDGNGAESDTRPVYTLPENSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNGKDNLTA  289

Query  292  NGIELPDVEGAIVSGTATGDWVLSCVRGEVHSITFVFTDGTVRTVPQSAkssdgsngksn  351
            NGIELPDVEGAIVSGTATGD VLSCVRG +HSITFVF+DG +RT+P++  +++G+N  + 
Sbjct  290  NGIELPDVEGAIVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTLPRPVANTQGNNNDNA  349

Query  352  gg--sigWLSDEHGIPCLSGDRKSNASTYLPTLFALSAAGAASDVMsesq-tttttdgts  408
            G+  SIGW+SD++GIPC+SG+RKSNASTYLPT+  L+ +++A+D ++++Q TT      +
Sbjct  350  GDRGSIGWISDNNGIPCISGERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQNNVNGG  409

Query  409  itstltgsagQAALGKALSGGTNELAEWVKARYGQMFDAIYVPPGANVAVHITRQIPIDY  468
            +TS+LTG+AGQA LG++L+GG +E+++WVK RYGQ FDA+YVPPGANVA+HITRQ+++DY
Sbjct  410  VTSALTGNAGQAVLGQTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAVDY  469

Query  469  EEKGRKVKYDFDVS  482
            E+ GRKV+YDF ++
Sbjct  470  EDHGRKVRYDFSLP  483

25) W5S_3504 in NC_017845


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  370 bits (1391),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 267/509 (53%), Positives = 383/509 (76%), Gaps = 23/509 (4%)

Query  1    MKMQSNMLVKLAVPLTLLVTVFIGLKACSPDKAQQQPDTAAKNDATLNDVTPEQLRALGI  60
            M++++N L+K+ +P+ ++V  FIG+KAC+  K   +P+ +AK   +L +++ ++L+ALGI
Sbjct  1    MQIKANGLMKVLLPVLIVVVCFIGVKACGL-KDTTEPE-PAKTTNALTELSQDDLKALGI  58

Query  61   EGDTPQDTLRTLIGRLNTVTTKQDRLDAENKVLAEENKRLKQTNQNVDERIGQAIasakt  120
            EGDT+ DTLRTLIG L  V ++Q  LD +NK L  EN++LK  N +V+ +I++A+ +AK 
Sbjct  59   EGDTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQ  118

Query  121  eesseksqlksqvqslsstvsdlvqqLKEVgtpgstssassgNHVGPGSDIPIGLGLDGG  180
            E +    + K+ +    +        L     + + ++   +   ++G+D+P+GLGLD  
Sbjct  119  ETNEALEKQKTFLLEKLND-------LTGTLKSQGQNTDMVSTGSSSGTDFPVGLGLD--  169

Query  181  FAGQATPSGSPGTDGLRWVEPIDAVAVDASGKPVTEGSSNRAAGFTFATSFLEENPVTRQ  240
                +  ++S+  + + W+ P DA   ++     +++ +++   FTF+TSFL++NPV+RQ
Sbjct  170  ----PENASSATQGEVIWISPQDAKKTEGQ----SQSDNDK---FTFPTSFLDDNPVSRQ  218

Query  241  QAELARQAGNGQTLSGNNASEGPVEPVYTLPENSTLIGSRAMTALLGRVPVDGKVTDPYP  300
            +AE  R   N Q L GN ++E+   PVYTLPENSTL+GS+AMTAL+GR+P+++KVTDPYP
Sbjct  219  RAEYDRVVKNKQELDGN-GAESDTRPVYTLPENSTLVGSKAMTALIGRIPINDKVTDPYP  277

Query  301  FKILIGKDNLTANGIDLPDVQGAIVSGTATGDWTLSCVRGSVSSITFVFSDGTVRTLPRP  360
            FK+L GKDNLTANGI+LPDV+GAIVSGTATGD  LSCVRG++ SITFVFSDG +RTLPRP
Sbjct  278  FKVLNGKDNLTANGIELPDVEGAIVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTLPRP  337

Query  361  sgqtegnnsqnsnnggsigwisDENGIPCLSGERKSNASTYLPTLFslsagsaagealaQ  420
             ++T+GNN++N+ + GSIGWISD+NGIPC+SGERKSNASTYLPT+  L+ GS+AG+AL+Q
Sbjct  338  VANTQGNNNDNAGDRGSIGWISDNNGIPCISGERKSNASTYLPTVALLGMGSSAGDALTQ  397

Query  421  NQNTAQTNGLGGVTSSLTGDAGQAVMGKAISGGMQETVDWVKARYGQTFDAVYVPPGMKV  480
            NQ T+Q N  GGVTS+LTG+AGQAV+G++++GG +E  DWVK RYGQTFDAVYVPPG +V
Sbjct  398  NQYTTQNNVNGGVTSALTGNAGQAVLGQTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANV  457

Query  481  AVHITRQLAIDYEEKGRKVKYDFNLGQSG  509
            A+HITRQLA+DYE+ GRKV+YDF+L  +G
Sbjct  458  AIHITRQLAVDYEDHGRKVRYDFSLPGTG  486

26) Spro_4171 in NC_009832


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  369 bits (1386),  Expect = 3e-103, Method: Compositional matrix adjust.
 Identities = 244/474 (52%), Positives = 365/474 (78%), Gaps = 18/474 (3%)

Query  29   CSSNKTTE-KTQQAHNVLANMSPEELRALGVEGDTPEDtlrtlvgtlrttrtQQAELQSN  87
            C+ + TTE    ++ N L+++S ++L+ALG+EGDT+ DTLRTL+G+LR  R++QA L+ +
Sbjct  28   CGLKDTTEPEPAKTTNALTELSQDDLKALGIEGDTSADTLRTLIGALRDVRARQAVLDEQ  87

Query  88   IDKVLKENEALRKRNTNVSGQVNEAVAGFqkqaqqrqqqlqqeqqTLMGKIQTLTDQLAG  147
               ++ EN+ L+  N++V+ Q+++AV +     Q+ ++ L++++  L+ K++ LT+ L +
Sbjct  88   NKALISENNKLKGENSSVGLQISNAVNA---AKQETNEALEKQKTFLLEKLNDLTGTLKS  144

Query  148  ---NKDKAKSDSDIPlglgldgmgagegSAAPGQDGLMWVGPKDMKEPDPRNPNSAKDGP  204
               N D   ++S    ++ ++     E ++++ Q+ ++W++P+D K  + + ++S +D  
Sbjct  145  QGQNTDMVSTGSSSGTDFPVGLGLDPENASSATQGEVIWISPQDAKKTEGQ-SQSDNDKF  203

Query  205  QFPTSFLSDNAITRQKAAYEQQVKGRT--NEKGAEENAEPVFTLPENSTLVGSRAMTALL  262
             FPTSFL DN+++RQ+A Y++ VK +   + +GAE ++ PV+TLPENSTLVGS+AMTAL+
Sbjct  204  TFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNGAESDTRPVYTLPENSTLVGSKAMTALI  263

Query  263  GRVPINGTVTDPYPFKLMIGKDNLTANGIELPDVEGAIVSGTASGDWTLSCVRGQVNSIT  322
            GR+PIN+ VTDPYPFK++ GKDNLTANGIELPDVEGAIVSGTA+GD  LSCVRG ++SIT
Sbjct  264  GRIPINDKVTDPYPFKVLNGKDNLTANGIELPDVEGAIVSGTATGDMVLSCVRGTIHSIT  323

Query  323  FVFADGTVRTLPHPDTNMKAnsnnnsgnsgKDVSTTAGIGWISDDNGIPCIGGERKSNAS  382
            FVF+DG +RTLP+P +N ++       N+  + +  ++IGWISD+NGIPCI+GERKSNAS
Sbjct  324  FVFSDGRIRTLPRPVANTQG-------NNNDNAGDRGSIGWISDNNGIPCISGERKSNAS  376

Query  383  TYLPTIaalsaasaaGEGISQGQYTTQNNVN-GISATMTGNAGQAVLGKALSGGMKETAD  441
            TYLPT+A L+ +S+AG++++Q QYTTQNNVN G+++++TGNAGQAVLG++L+GG KE +D
Sbjct  377  TYLPTVALLGMGSSAGDALTQNQYTTQNNVNGGVTSALTGNAGQAVLGQTLGGGFKEVTD  436

Query  442  WVRERYGMMFDAVYVPPGQKLAVHITRQLAIDFETKGRKVRYDFSLPGEDGSTG  495
            WV++RYG  FDAVYVPPG ++A+HITRQLA+D+E  GRKVRYDFSLPG +G  G
Sbjct  437  WVKQRYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKVRYDFSLPGTGGHYG  490

27) XNC1_3678 in NC_014228


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  369 bits (1385),  Expect = 3e-103, Method: Compositional matrix adjust.
 Identities = 236/489 (49%), Positives = 346/489 (71%), Gaps = 39/489 (7%)

Query  1    MQVKSNSLVKILVPAVLMVGGFIGIKSCSSTDSTAPDTPQN-NVLATLSPEELQALGVVG  59
            MQ+K+N+L+K+L+P +++V  FIG+K+C+  D+T P+ ++  N L+ LS ++L+ALG+ G
Sbjct  1    MQIKANGLMKVLLPVLIVVVCFIGVKACGLKDTTEPEPAKTTNALTELSQDDLKALGIEG  60

Query  60   DTPEDTLRTLVGTLNKVRAEQQRLGQQNADILKENDQLKNQRQDVAGQIDAAVAAIrqdd  119
            DT+ DTLRTL+G+L  VRA Q  L++QN  ++ EN++LK +   V+ QI  AV A     
Sbjct  61   DTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENSSVGLQISNAVNA-----  115

Query  120  eqrrrelqdeqqgllAQIDLLTERLN--ATPLsapdspippgsgsipysaN---------  168
                   Q+ +++L  Q  +L E+LN  +  L + +      S + + +++         
Sbjct  116  -----AKQETNEALEKQKTFLLEKLNDLTGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDP  170

Query  169  ---ASTGQNELIWITPADEKPADIQTPGSGKATAQFPTSFLSEQSAAGQSKP------QS  219
               +S+ Q E+IWI+P D K ++ Q+  S++    FPTSFL +++ + Q         + 
Sbjct  171  ENASSATQGEVIWISPQDAKKTEGQSQ-SDNDKFTFPTSFLDDNPVSRQRAEYDRVVKNK  229

Query  220  PSLQNPSKEENEQPVYTLPENATLVGSQAMTALLGRVPVNGTVTDPYPFKILIGKDNLTA  279
              L+  + E + +PVYTLPEN+TLVGS+AMTAL+GR+P+N+ VTDPYPFK+L GKDNLTA
Sbjct  230  QELDGNGAESDTRPVYTLPENSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNGKDNLTA  289

Query  280  NGIELPEVEGAVVSGSASGDWTLSCVRGQVNSITVVFQDGTVRTLP-------GSGQNNN  332
            NGIELP+VEGA+VSG+A+GD  LSCVRG ++SIT VF DG +RTLP       G+ ++N 
Sbjct  290  NGIELPDVEGAIVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTLPRPVANTQGNNNDNA  349

Query  333  TSANGIGWLSDENGIPCISGERKSNAATYLPTLFALSAMNSAGDALNESQRTAQTSGTGG  392
                +IGW+SD+NGIPCISGERKSNA+TYLPT+  L+  +SAGDAL ++Q T+Q +  GG
Sbjct  350  GDRGSIGWISDNNGIPCISGERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQNNVNGG  409

Query  393  ITTALTGNAGQAALGKAMSGGMNDMSEWLRQRYSQTFDAVYVPPGARVVVHITQRLAIDY  452
            +T+ALTGNAGQA LG++++GG +++++W++QRY+QTFDAVYVPPGA V +HIT++LA+DY
Sbjct  410  VTSALTGNAGQAVLGQTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAVDY  469

Query  453  ETKGRKVRY  461
            E  GRKVRY
Sbjct  470  EDHGRKVRY  478

28) XBJ1_1527 in NC_013892


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  367 bits (1379),  Expect = 1e-102, Method: Compositional matrix adjust.
 Identities = 236/492 (48%), Positives = 351/492 (72%), Gaps = 39/492 (7%)

Query  1    MQVKSNSLVKILVPVVLMVGGFIGIKSCSSTDTAPPATPQN-NALATLSPEELQALGVGG  59
            MQ+K+N+L+K+L+PV+++V  FIG+K+C+  DT+ P  ++  NAL+ LS ++L+ALG+ G
Sbjct  1    MQIKANGLMKVLLPVLIVVVCFIGVKACGLKDTTEPEPAKTTNALTELSQDDLKALGIEG  60

Query  60   DTPEDTLRTLVGTLNKVRSEQQRLGQQNADILKENDQLKNQRQDVAGQIDAAVAAIrqdd  119
            DT+ DTLRTL+G+L  VR+ Q  L++QN  ++ EN++LK +   V+ QI  AV A     
Sbjct  61   DTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENSSVGLQISNAVNA-----  115

Query  120  eqrrrelqdeqqgllAQIDLLTERLN--SAPLsapdspippgsgsipysaN---------  168
                   Q+ +++L  Q  +L E+LN  ++ L + +      S + + +++         
Sbjct  116  -----AKQETNEALEKQKTFLLEKLNDLTGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDP  170

Query  169  ---AGTGQNELIWIAPADEKPADIQTPGSGKATAQFPTSFLSEQSAAGQNKP------QS  219
               +++ Q E+IWI+P D K ++ Q+  S++    FPTSFL +++ + Q         + 
Sbjct  171  ENASSATQGEVIWISPQDAKKTEGQSQ-SDNDKFTFPTSFLDDNPVSRQRAEYDRVVKNK  229

Query  220  PSLQNPSKEENEKPVYTLPENATLVGSQAMTALLGRVPVNGTVTDPYPFKILIGKDNLTA  279
              L+  + E + +PVYTLPEN+TLVGS+AMTAL+GR+P+N+ VTDPYPFK+L GKDNLTA
Sbjct  230  QELDGNGAESDTRPVYTLPENSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNGKDNLTA  289

Query  280  NGIELPEVEGAVVSGSASGDWTLSCVRGQVNSITVVFQDGTVRTLP-------GSGQNNN  332
            NGIELP+VEGA+VSG+A+GD  LSCVRG ++SIT VF DG +RTLP       G+ ++N 
Sbjct  290  NGIELPDVEGAIVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTLPRPVANTQGNNNDNA  349

Query  333  TSANGIGWLSDENGIPCISGERKSNAATYLPTLFALSAMNSAGDALSESQRTAQTSGTGG  392
                +IGW+SD+NGIPCISGERKSNA+TYLPT+  L+  +SAGDAL+++Q T+Q +  GG
Sbjct  350  GDRGSIGWISDNNGIPCISGERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQNNVNGG  409

Query  393  ITTALTGNAGQAALGKAMSGGMNDLSEWLRQRYSQTFDAVYVPPGARLVVHITQRLAIDY  452
            +T+ALTGNAGQA LG++++GG +++++W++QRY+QTFDAVYVPPGA + +HIT++LA+DY
Sbjct  410  VTSALTGNAGQAVLGQTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAVDY  469

Query  453  EVKGRKVRYGVS  464
            E  GRKVRY+ S
Sbjct  470  EDHGRKVRYDFS  481

29) EPYR_03272 in NC_017390


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  367 bits (1380),  Expect = 8e-103, Method: Compositional matrix adjust.
 Identities = 248/482 (52%), Positives = 345/482 (72%), Gaps = 25/482 (5%)

Query  24   LGVKSCAESSSQTAGGQKTSNVALKDLTPEDLKALGIEGDTPQDTLRTIVGNFRKVQERL  83
            +GVK+C+   +  +   KT+N AL +L+ +DLKALGIEGDT+ DTLRT++G +R V+ R 
Sbjct  23   IGVKACGLKDTTEPEPAKTTN-ALTELSQDDLKALGIEGDTSADTLRTLIGALRDVRARQ  81

Query  84   DGIADXNKKLSDENKALKKTNGNVDRQISQVVDNARAEDTLKRSQLGAQVTDLSTQVDRL  143
              + + NK L  EN+ LK  N++V+ QIS+ V+ A+ E       L  Q T L  +++ L
Sbjct  82   AVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQETN---EALEKQKTFLLEKLNDL  138

Query  144  MEQLRNGASGAAMVGKNSISGSDIPVGMGYDNGSGVNDSTPPADGMQWVEPKDGIPTDAS  203
               L++ +  + MV+  S SG+D+PVG+G D     N S++  + + W+ P+D+  T+  
Sbjct  139  TGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDPE---NASSATQGEVIWISPQDAKKTE--  193

Query  204  GRPVSGSNGNNATGFAFASTFXDVSDAGKTVNAATSAVQKTL----SEAEKTTDPVYTLP  259
                 G + ++   F+F+++F D +  ++        V++      + AE  T PVYTLP
Sbjct  194  -----GQSQSDNDKFTFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNGAESDTRPVYTLP  248

Query  260  ENATLVGSQAMTALLGRVPVDGKVTDPYPFKVMVGKDNLTANGIELPDVQGAIVSGTATG  319
            EN+TLVGS+AMTAL+GR+P+++KVTDPYPFKV+ GKDNLTANGIELPDV+GAIVSGTATG
Sbjct  249  ENSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNGKDNLTANGIELPDVEGAIVSGTATG  308

Query  320  DWTLSCVRGAITSITFVFTDG---TVPSPngqngsganqngqggngnnssIGWLSXDNGI  376
            D  LSCVRG+I SITFVF+DG   T+P P ++  +  N+N+ +  +    IGW+S +NGI
Sbjct  309  DMVLSCVRGTIHSITFVFSDGRIRTLPRPVANTQGNNNDNAGDRGS----IGWISDNNGI  364

Query  377  PCISGTRKSNASTYLPTIaalaaagaagdalaQNQNTTQTNGYGGVTSSLTGDAGQAVXG  436
            PCISG RKSNASTYLPT+A L+ +++AGDAL+QNQ TTQ N  GGVTS+LTG+AGQAV G
Sbjct  365  PCISGERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQNNVNGGVTSALTGNAGQAVLG  424

Query  437  KAFSGGMRETVDWVKARYGQTFDAIYVPPGQKVALHITRQLAIDYEEKGRKVKYDFSLAG  496
            ++++GG +E  DWVK RYGQTFDA+YVPPG +VA+HITRQLA+DYE+ GRKV+YDFSL+G
Sbjct  425  QTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKVRYDFSLPG  484

Query  497  SG  498
            +G
Sbjct  485  TG  486

30) YPZ3_0317 in NC_014029


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  365 bits (1373),  Expect = 3e-102, Method: Compositional matrix adjust.
 Identities = 243/470 (52%), Positives = 358/470 (77%), Gaps = 17/470 (3%)

Query  32   DKTSEKPQQTHNVLSNMSPEELRALGVEGDTPEDtlrtlvgtlrttrtQQAELQSNIDKV  91
            D T   P +T N L+++S ++L+ALG+EGDT+ DTLRTL+G+LR  R++QA L+ +   +
Sbjct  32   DTTEPEPAKTTNALTELSQDDLKALGIEGDTSADTLRTLIGALRDVRARQAVLDEQNKAL  91

Query  92   LKENEALRKRNTNVSGQVNEAVAGFRKqaqqrqqqlqqeqqTLMGKIQTLTDQLAG---N  148
            + EN+ L+  N++V+ Q+++AV + ++++++  ++ +     L+ K++ LT+ L +   N
Sbjct  92   ISENNKLKGENSSVGLQISNAVNAAKQETNEALEKQKTF---LLEKLNDLTGTLKSQGQN  148

Query  149  KDKPKSDSDIPlglgldgmgagegSAAPGQDGLMWVGPKDMKEPDPRNPNSVKDGPQFPT  208
             D   ++S    ++ ++     E ++++ Q+ ++W++P+D K  + ++ +  +D   FPT
Sbjct  149  TDMVSTGSSSGTDFPVGLGLDPENASSATQGEVIWISPQDAKKTEGQSQSD-NDKFTFPT  207

Query  209  SFLSDNAITRQKAAYEQQVKGRT--NEKGAEENAEPVFTLPENSTLVGSRAMTALLGRVP  266
            SFL DN+++RQ+A Y++ VK +   + +GAE ++ PV+TLPENSTLVGS+AMTAL+GR+P
Sbjct  208  SFLDDNPVSRQRAEYDRVVKNKQELDGNGAESDTRPVYTLPENSTLVGSKAMTALIGRIP  267

Query  267  INGTVTDPYPFKLMIGKDNLTANGIELPDVEGAIVSGTASGDWTLSCVRGQVNSITFVFA  326
            IN+ VTDPYPFK++ GKDNLTANGIELPDVEGAIVSGTA+GD  LSCVRG ++SITFVF+
Sbjct  268  INDKVTDPYPFKVLNGKDNLTANGIELPDVEGAIVSGTATGDMVLSCVRGTIHSITFVFS  327

Query  327  DGTVRTLPHPdtnmkansnnnsgntgkdVSTTAGIGWISDDNGIPCIGGERKSNASTYLP  386
            DG +RTLP+P         N  GN   + +  ++IGWISD+NGIPCI+GERKSNASTYLP
Sbjct  328  DGRIRTLPRP-------VANTQGNNNDNAGDRGSIGWISDNNGIPCISGERKSNASTYLP  380

Query  387  TIaalsaasaaGEGISQGQYTTQNNVN-GITATMTGNAGQAVLGKALSGGMKETADWVRE  445
            T+A L+ +S+AG++++Q QYTTQNNVN G+T+++TGNAGQAVLG++L+GG KE +DWV++
Sbjct  381  TVALLGMGSSAGDALTQNQYTTQNNVNGGVTSALTGNAGQAVLGQTLGGGFKEVTDWVKQ  440

Query  446  RYGMMFDAVYVPPGQKLAVHITRQLAIDFETKGRKVRYDFSLPGEDGSTG  495
            RYG  FDAVYVPPG ++A+HITRQLA+D+E  GRKVRYDFSLPG +G  G
Sbjct  441  RYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKVRYDFSLPGTGGHYG  490

31) KPHS_45020 in NC_016845


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  365 bits (1373),  Expect = 3e-102, Method: Compositional matrix adjust.
 Identities = 241/494 (49%), Positives = 372/494 (76%), Gaps = 26/494 (5%)

Query  2    MQVKSNTLLKMAVPACLFIAIAIGVKSCGSR--SQPAATQTGDSVVADLTQEELKALGVE  59
            MQ+K+N L+K+ +P  + +   IGVK+CG +  ++P +++T +++ ++L+Q++LKALG+E
Sbjct  1    MQIKANGLMKVLLPVLIVVVCFIGVKACGLKDTTEPEPAKTTNAL-TELSQDDLKALGIE  59

Query  60   GDTPQDTLRTLVGRMRTIQNKQVELDRDNKALAEENARLAQGESGLDNRISaavakaqke  119
            GDT+ DTLRTL+G +R ++ +Q  LD +NKAL  EN +L   +S+++ +IS AV  A++E
Sbjct  60   GDTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQE  119

Query  120  aeqkaegvke-eqRQLSKALDELKERLLnggaggssagangDLPVGLGLGAGDEPPAPAS  178
            +++  E  K     +L+   + LK +  N +  ++++++  D+PVGLGL++ +++++++ 
Sbjct  120  TNEALEKQKTFLLEKLNDLTGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDP-ENASSATQ  178

Query  179  GEGMVWIEPQDAMQMSRDGKMTLADVSASGTGGALQFPSRFSSLEDNEITRQKAELARNA  238
            GE ++WI PQDA +         ++  + +  + + FP+ F  L+DN ++RQ+AE  R  
Sbjct  179  GE-VIWISPQDAKK---------TEGQSQSDNDKFTFPTSF--LDDNPVSRQRAEYDRVV  226

Query  239  KNER-----GIEDAATPVYTLPENSTLVGSQAMTALLGRVPIDGKVTDPYPFKVLIGKDN  293
            KN +     G E  + PVYTLPENSTLVGS+AMTAL+GR+PI++KVTDPYPFKVL GKDN
Sbjct  227  KNKQELDGNGAESDTRPVYTLPENSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNGKDN  286

Query  294  LTANGIQLPDVEGAIVSGTATGDWTLSCVRGDVQSITFVFSDGTVRTVPSPAKSTDGSDN  353
            LTANGI+LPDVEGAIVSGTATGD  LSCVRG ++SITFVFSDG +RT+P P  +T+G++N
Sbjct  287  LTANGIELPDVEGAIVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTLPRPVANTQGNNN  346

Query  354  KNRSG-GSIGWLSDEHGVPCLAGERKSNASTYLPT--LFALsgataaaeamaegemtssT  410
             N ++ GSIGW+SD++G+PC++GERKSNASTYLPT  L++++++++ A +  +    ++ 
Sbjct  347  DNAGDRGSIGWISDNNGIPCISGERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQNNV  406

Query  411  EGTDVTRTLTGDAGTYALGKAVSGGMQETTNWVRQRYGQTFDAIYVPPGLRVAVHITRQL  470
            +G +VT +LTG+AG   LG++++GG +E T+WV+QRYGQTFDA+YVPPG  VA+HITRQL
Sbjct  407  NG-GVTSALTGNAGQAVLGQTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQL  465

Query  471  PIDYEEQGRRVKYD  484
            ++DYE++GR+V+YD
Sbjct  466  AVDYEDHGRKVRYD  479

32) N559_0805 in NC_022082


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  365 bits (1373),  Expect = 3e-102, Method: Compositional matrix adjust.
 Identities = 241/494 (49%), Positives = 372/494 (76%), Gaps = 26/494 (5%)

Query  2    MQVKSNTLLKMAVPACLFIAIAIGVKSCGSR--SQPAATQTGDSVVADLTQEELKALGVE  59
            MQ+K+N L+K+ +P  + +   IGVK+CG +  ++P +++T +++ ++L+Q++LKALG+E
Sbjct  1    MQIKANGLMKVLLPVLIVVVCFIGVKACGLKDTTEPEPAKTTNAL-TELSQDDLKALGIE  59

Query  60   GDTPQDTLRTLVGRMRTIQNKQVELDRDNKALAEENARLAQGESGLDNRISaavakaqke  119
            GDT+ DTLRTL+G +R ++ +Q  LD +NKAL  EN +L   +S+++ +IS AV  A++E
Sbjct  60   GDTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQE  119

Query  120  aeqkaegvke-eqRQLSKALDELKERLLnggaggssagangDLPVGLGLGAGDEPPAPAS  178
            +++  E  K     +L+   + LK +  N +  ++++++  D+PVGLGL++ +++++++ 
Sbjct  120  TNEALEKQKTFLLEKLNDLTGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDP-ENASSATQ  178

Query  179  GEGMVWIEPQDAMQMSRDGKMTLADVSASGTGGALQFPSRFSSLEDNEITRQKAELARNA  238
            GE ++WI PQDA +         ++  + +  + + FP+ F  L+DN ++RQ+AE  R  
Sbjct  179  GE-VIWISPQDAKK---------TEGQSQSDNDKFTFPTSF--LDDNPVSRQRAEYDRVV  226

Query  239  KNER-----GIEDAATPVYTLPENSTLVGSQAMTALLGRVPIDGKVTDPYPFKVLIGKDN  293
            KN +     G E  + PVYTLPENSTLVGS+AMTAL+GR+PI++KVTDPYPFKVL GKDN
Sbjct  227  KNKQELDGNGAESDTRPVYTLPENSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNGKDN  286

Query  294  LTANGIQLPDVEGAIVSGTATGDWTLSCVRGDVQSITFVFSDGTVRTVPSPAKSTDGSDN  353
            LTANGI+LPDVEGAIVSGTATGD  LSCVRG ++SITFVFSDG +RT+P P  +T+G++N
Sbjct  287  LTANGIELPDVEGAIVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTLPRPVANTQGNNN  346

Query  354  KNRSG-GSIGWLSDEHGVPCLAGERKSNASTYLPT--LFALsgataaaeamaegemtssT  410
             N ++ GSIGW+SD++G+PC++GERKSNASTYLPT  L++++++++ A +  +    ++ 
Sbjct  347  DNAGDRGSIGWISDNNGIPCISGERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQNNV  406

Query  411  EGTDVTRTLTGDAGTYALGKAVSGGMQETTNWVRQRYGQTFDAIYVPPGLRVAVHITRQL  470
            +G +VT +LTG+AG   LG++++GG +E T+WV+QRYGQTFDA+YVPPG  VA+HITRQL
Sbjct  407  NG-GVTSALTGNAGQAVLGQTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQL  465

Query  471  PIDYEEQGRRVKYD  484
            ++DYE++GR+V+YD
Sbjct  466  AVDYEDHGRKVRYD  479

33) XBJ1_3397 in NC_013892


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  365 bits (1373),  Expect = 3e-102, Method: Compositional matrix adjust.
 Identities = 230/482 (48%), Positives = 346/482 (72%), Gaps = 25/482 (5%)

Query  1    MQVKSNSLVKILVPMVLMVGGFIGIKSCS-StdttapdtppNNVLATLSPEELQALGVGG  59
            MQ+K+N+L+K+L+P++++V  FIG+K+C+    T +  +   N L+ LS ++L+ALG+ G
Sbjct  1    MQIKANGLMKVLLPVLIVVVCFIGVKACGLKDTTEPEPAKTTNALTELSQDDLKALGIEG  60

Query  60   DTPEDTLRTLVGTLNKVRSEQQRLGQQNADILKENDQLKNQRQDVAGQIDAAVAAIrqdd  119
            DT+ DTLRTL+G+L  VR+ Q  L++QN  ++ EN++LK +   V+ QI  AV A +Q+ 
Sbjct  61   DTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQET  120

Query  120  eqrrrelqdeqqgllAQI-------DLLTERLNSAPLSAPDSPIPLGSGSIPYSANAGTG  172
            ++     +      L ++       +  T+ +++++ S+ D P+ LG ++      +++ 
Sbjct  121  NEALEKQKTFLLEKLNDLTGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDP---ENASSAT  177

Query  173  QNELIWITPADEKPADIQTPGSGKATAQFPTSFLSEQSAAGQSKP------QSPSLQNPS  226
            Q E+IWI+P D K ++ Q+  S++    FPTSFL +++ + Q         +   L+  +
Sbjct  178  QGEVIWISPQDAKKTEGQSQ-SDNDKFTFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNG  236

Query  227  KEENEQPVYTLPENATLVGSQAMTALLGRVPVNGAVTDPYPFKILIGKDNLTANGIELPE  286
             E + +PVYTLPEN+TLVGS+AMTAL+GR+P+N+ VTDPYPFK+L GKDNLTANGIELP+
Sbjct  237  AESDTRPVYTLPENSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNGKDNLTANGIELPD  296

Query  287  VEGAVVSGSASGDWTLSCVRGQVNSITVVFQDGTVRTLP-------GSGQNNNTSANGIG  339
            VEGA+VSG+A+GD  LSCVRG ++SIT VF DG +RTLP       G+ ++N     +IG
Sbjct  297  VEGAIVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTLPRPVANTQGNNNDNAGDRGSIG  356

Query  340  WLSDENGIPCISGERKSNAATYLPTLFALSAMHSAGDALSESQRTAQTSGTGGITTALTG  399
            W+SD+NGIPCISGERKSNA+TYLPT+  L+   SAGDAL+++Q T+Q +  GG+T+ALTG
Sbjct  357  WISDNNGIPCISGERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQNNVNGGVTSALTG  416

Query  400  NAGQAALGKAMSGGMNDMSEWLRQRYSQTFDAIYVPPGARVVVHITQRLAIDYETKGRKV  459
            NAGQA LG++++GG +++++W++QRY+QTFDA+YVPPGA V +HIT++LA+DYE  GRKV
Sbjct  417  NAGQAVLGQTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKV  476

Query  460  RY  461
            RY
Sbjct  477  RY  478

34) EbC_pEb10200520 in NC_014304


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  361 bits (1355),  Expect = 8e-101, Method: Compositional matrix adjust.
 Identities = 245/486 (51%), Positives = 360/486 (75%), Gaps = 22/486 (4%)

Query  12   FIAVKSYNSKPQEPATQATHAQTDSALKNLSPQELKALGIEGDTPQDTLKTIVGSLNAVR  71
            FI+VK+   K    +T++  A+T +AL +LS ++LKALGIEGDT+ DTL+T++G+L  VR
Sbjct  22   FIGVKACGLKD---TTEPEPAKTTNALTELSQDDLKALGIEGDTSADTLRTLIGALRDVR  78

Query  72   QQQDSLNKQNTRLLDENEKLRERNTNVSGQVNEAVQGVEKSYHARENQMRQQQNVLTSKI  131
             +Q  L+ QN  L+ EN+KL+  N++V+ Q+++AV++     +  ++ + +Q+  L  K+
Sbjct  79   ARQAVLDEQNKALISENNKLKGENSSVGLQISNAVNAAK---QETNEALEKQKTFLLEKL  135

Query  132  NELTNKLQNAGKSVADKTKgqdgdiplglgldgmsggggnsptsgsdgLMWVtpqdspst  191
            N+LT  L++ G+   +      G  +      G++ +  N++++  + ++W++PQD+  T
Sbjct  136  NDLTGTLKSQGQ---NTDMVSTGSSSGTDFPVGLGLDPENASSATQGEVIWISPQDAKKT  192

Query  192  spsqnnsasassaGEAKFPTSFLSENALTKQKGSYEQQVKGST--SekgeeeeaePVYTL  249
                ++       +   FPTSFL +N++++Q++ Y++ VK       +G E ++ PVYTL
Sbjct  193  EGQSQSDN-----DKFTFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNGAESDTRPVYTL  247

Query  250  PENSTLIGSRAMTALLGRVPINGTVTDPYPFKVLIGKDNLTANGIELPDVEGAIVSGTAS  309
            PENSTL+GS+AMTAL+GR+PIN+ VTDPYPFKVL GKDNLTANGIELPDVEGAIVSGTA+
Sbjct  248  PENSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNGKDNLTANGIELPDVEGAIVSGTAT  307

Query  310  GDWTLSCVRGQVNSVTFVFTDGTVRTLPKPDRsgkggnsgnqnggketgtsggigWISDE  369
            GD  LSCVRG ++S+TFVF+DG +RTLP+P        + + N   ++G  G+IGWISD+
Sbjct  308  GDMVLSCVRGTIHSITFVFSDGRIRTLPRP------VANTQGNNNDNAGDRGSIGWISDN  361

Query  370  NGIPCISGTRKSNASSYLPTigllgaagaagdaigQNQQTSQTNAYGGVTSTLTGDAGQA  429
            NGIPCISG RKSNAS+YLPT++LLG +++AGDA+ QNQ T+Q N  GGVTS+LTG+AGQA
Sbjct  362  NGIPCISGERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQNNVNGGVTSALTGNAGQA  421

Query  430  VLGKAISGSSDEITEWVKQRYGQTFDAIYVQPGAKLAVHITRELAIDYEDKGRRIRYDFT  489
            VLG++++G+  E+T+WVKQRYGQTFDA+YV PGA++A+HITR+LA+DYED GR++RYDF+
Sbjct  422  VLGQTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKVRYDFS  481

Query  490  MPGEDG  495
            +PG +G
Sbjct  482  LPGTGG  487

35) LF82_686 in NC_011993


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  360 bits (1351),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 247/475 (52%), Positives = 368/475 (78%), Gaps = 27/475 (5%)

Query  2    IGVKSCGGPKQT-PDSADNT-TVADLTQEELRILGIEGDTPQDTLRTLVGRIKTIQTNQE  59
            IGVK+CG    T P++A  T ++++L+Q++L+ LGIEGDT+ DTLRTL+G ++ +++ Q 
Sbjct  23   IGVKACGLKDTTEPEPAKTTNALTELSQDDLKALGIEGDTSADTLRTLIGALRDVRARQA  82

Query  60   NLEKQNVALAEENARLQNKGNNVDGRINDAVNAAKQESTqaqqklqa-eqqrlaGLLESL  118
             L+ QN AL  EN +L+   ++V+ +I++AVNAAKQE+ +A +K ++   ++L +L  +L
Sbjct  83   VLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQETNEALEKQKTFLLEKLNDLTGTL  142

Query  119  KNTVPGPG-AGSNTSAGSDLPVGLGLGLEDAGQAETVAQG-TLWIEPQDGVQLDRNGKPV  176
            K+     +  ++ +S+G+D+PVGLGL   D+ +A + +QG  +WI PQD+ + + ++++ 
Sbjct  143  KSQGQNTDMVSTGSSSGTDFPVGLGL---DPENASSATQGEVIWISPQDAKKTEGQSQS-  198

Query  177  tgaaaatngtgtFQFPTAFGGLNDNAITRQKAELDRNAKNQQAIEETDL-----PVYTLP  231
                    + + F FPT+F  L+DN+++RQ+AE DR  KN+Q ++  +      PVYTLP
Sbjct  199  --------DNDKFTFPTSF--LDDNPVSRQRAEYDRVVKNKQELDGNGAESDTRPVYTLP  248

Query  232  ENSTLVGSQAMTALLGRVPIDGKVTDPYPFKVLIGKENLTANGIELPDVEGAIVSGTATG  291
            ENSTLVGS+AMTAL+GR+PI++KVTDPYPFKVL GK+NLTANGIELPDVEGAIVSGTATG
Sbjct  249  ENSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNGKDNLTANGIELPDVEGAIVSGTATG  308

Query  292  DWVLSCVRGEVHSITFVFTDGTVRTVPQSAkssdgsngksngg--sigWLSDEHGIPCLS  349
            D VLSCVRG +HSITFVF+DG +RT+P++  +++G+N  + G+  SIGW+SD++GIPC+S
Sbjct  309  DMVLSCVRGTIHSITFVFSDGRIRTLPRPVANTQGNNNDNAGDRGSIGWISDNNGIPCIS  368

Query  350  GDRKSNASTYLPTLFALSAAGAASDVMsesq-tttttdgtsitstltgsagQAALGKALS  408
            G+RKSNASTYLPT+  L+ +++A+D ++++Q TT      ++TS+LTG+AGQA LG++L+
Sbjct  369  GERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQNNVNGGVTSALTGNAGQAVLGQTLG  428

Query  409  GGTNELAEWVKARYGQMFDAIYVPPGANVAVHITRQIPIDYEEKGRKVKYDFDVS  463
            GG +E+++WVK RYGQ FDA+YVPPGANVA+HITRQ+++DYE+ GRKV+YDF ++
Sbjct  429  GGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKVRYDFSLP  483

36) SerAS12_0292 in NC_015566


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  360 bits (1353),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 239/471 (51%), Positives = 361/471 (77%), Gaps = 18/471 (3%)

Query  29   CSSNKTTE-KTQQAHNVLANMSPEELRALGVEGDTPEDtlrtlvgtlrttrtQQAELQSN  87
            C+ + TTE    ++ N L+++S ++L+ALG+EGDT+ DTLRTL+G+LR  R++QA L+ +
Sbjct  28   CGLKDTTEPEPAKTTNALTELSQDDLKALGIEGDTSADTLRTLIGALRDVRARQAVLDEQ  87

Query  88   IDKVLKENEALRKRNTNVSGQVNEAVAGFqkqaqqrqqqlqqeqqTLMGKIQTLTDQLAG  147
               ++ EN+ L+  N++V+ Q+++AV +     Q+ ++ L++++  L+ K++ LT+ L +
Sbjct  88   NKALISENNKLKGENSSVGLQISNAVNA---AKQETNEALEKQKTFLLEKLNDLTGTLKS  144

Query  148  ---NKDKAKSDSDIPlglgldgmgagegSAAPGQDGLMWVGPKDMKEPDPRNPNSAKDGP  204
               N D   ++S    ++ ++     E ++++ Q+ ++W++P+D K  + + ++S +D  
Sbjct  145  QGQNTDMVSTGSSSGTDFPVGLGLDPENASSATQGEVIWISPQDAKKTEGQ-SQSDNDKF  203

Query  205  QFPTSFLSYNAITRQKAAYEQQVKGRT--NEKGGEENAEPVFTLPENSTLVGSRSMTALL  262
             FPTSFL  N+++RQ+A Y++ VK +   + +G+E ++ PV+TLPENSTLVGS++MTAL+
Sbjct  204  TFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNGAESDTRPVYTLPENSTLVGSKAMTALI  263

Query  263  GRVPINGTVTDPYPFKLMIGKDNLTANGIELPDVEGAIVSGTASGDWTLSCVRGQVNSIT  322
            GR+PIN+ VTDPYPFK++ GKDNLTANGIELPDVEGAIVSGTA+GD  LSCVRG ++SIT
Sbjct  264  GRIPINDKVTDPYPFKVLNGKDNLTANGIELPDVEGAIVSGTATGDMVLSCVRGTIHSIT  323

Query  323  FVFADGTVRTLPHPDTNMKAnssnnsgnsgKDVSTTAGIGWISDDNGIPCIGGERKSNAL  382
            FVF+DG +RTLP+P +N ++       N+  + +  ++IGWISD+NGIPCI+GERKSNA 
Sbjct  324  FVFSDGRIRTLPRPVANTQG-------NNNDNAGDRGSIGWISDNNGIPCISGERKSNAS  376

Query  383  TYLPTIaalsaasaaGEGISQGQYTTQNNVN-GISDTMTGNAGQAVLGKALSGGMKETAD  441
            TYLPT+A L+ +S+AG++++Q QYTTQNNVN G++ ++TGNAGQAVLG++L+GG KE +D
Sbjct  377  TYLPTVALLGMGSSAGDALTQNQYTTQNNVNGGVTSALTGNAGQAVLGQTLGGGFKEVTD  436

Query  442  WVRERYGMMFDAVYVPPGQKLAVHITRQLAIDFETKGRKVRYDFSLPGEDG  492
            WV++RYG  FDAVYVPPG ++A+HITRQLA+D+E  GRKVRYDFSLPG +G
Sbjct  437  WVKQRYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKVRYDFSLPGTGG  487

37) SerAS13_0291 in NC_017573


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  360 bits (1353),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 239/471 (51%), Positives = 361/471 (77%), Gaps = 18/471 (3%)

Query  29   CSSNKTTE-KTQQAHNVLANMSPEELRALGVEGDTPEDtlrtlvgtlrttrtQQAELQSN  87
            C+ + TTE    ++ N L+++S ++L+ALG+EGDT+ DTLRTL+G+LR  R++QA L+ +
Sbjct  28   CGLKDTTEPEPAKTTNALTELSQDDLKALGIEGDTSADTLRTLIGALRDVRARQAVLDEQ  87

Query  88   IDKVLKENEALRKRNTNVSGQVNEAVAGFqkqaqqrqqqlqqeqqTLMGKIQTLTDQLAG  147
               ++ EN+ L+  N++V+ Q+++AV +     Q+ ++ L++++  L+ K++ LT+ L +
Sbjct  88   NKALISENNKLKGENSSVGLQISNAVNA---AKQETNEALEKQKTFLLEKLNDLTGTLKS  144

Query  148  ---NKDKAKSDSDIPlglgldgmgagegSAAPGQDGLMWVGPKDMKEPDPRNPNSAKDGP  204
               N D   ++S    ++ ++     E ++++ Q+ ++W++P+D K  + + ++S +D  
Sbjct  145  QGQNTDMVSTGSSSGTDFPVGLGLDPENASSATQGEVIWISPQDAKKTEGQ-SQSDNDKF  203

Query  205  QFPTSFLSYNAITRQKAAYEQQVKGRT--NEKGGEENAEPVFTLPENSTLVGSRSMTALL  262
             FPTSFL  N+++RQ+A Y++ VK +   + +G+E ++ PV+TLPENSTLVGS++MTAL+
Sbjct  204  TFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNGAESDTRPVYTLPENSTLVGSKAMTALI  263

Query  263  GRVPINGTVTDPYPFKLMIGKDNLTANGIELPDVEGAIVSGTASGDWTLSCVRGQVNSIT  322
            GR+PIN+ VTDPYPFK++ GKDNLTANGIELPDVEGAIVSGTA+GD  LSCVRG ++SIT
Sbjct  264  GRIPINDKVTDPYPFKVLNGKDNLTANGIELPDVEGAIVSGTATGDMVLSCVRGTIHSIT  323

Query  323  FVFADGTVRTLPHPDTNMKAnssnnsgnsgKDVSTTAGIGWISDDNGIPCIGGERKSNAL  382
            FVF+DG +RTLP+P +N ++       N+  + +  ++IGWISD+NGIPCI+GERKSNA 
Sbjct  324  FVFSDGRIRTLPRPVANTQG-------NNNDNAGDRGSIGWISDNNGIPCISGERKSNAS  376

Query  383  TYLPTIaalsaasaaGEGISQGQYTTQNNVN-GISDTMTGNAGQAVLGKALSGGMKETAD  441
            TYLPT+A L+ +S+AG++++Q QYTTQNNVN G++ ++TGNAGQAVLG++L+GG KE +D
Sbjct  377  TYLPTVALLGMGSSAGDALTQNQYTTQNNVNGGVTSALTGNAGQAVLGQTLGGGFKEVTD  436

Query  442  WVRERYGMMFDAVYVPPGQKLAVHITRQLAIDFETKGRKVRYDFSLPGEDG  492
            WV++RYG  FDAVYVPPG ++A+HITRQLA+D+E  GRKVRYDFSLPG +G
Sbjct  437  WVKQRYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKVRYDFSLPGTGG  487

38) SerAS9_0292 in NC_015567


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  360 bits (1353),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 239/471 (51%), Positives = 361/471 (77%), Gaps = 18/471 (3%)

Query  29   CSSNKTTE-KTQQAHNVLANMSPEELRALGVEGDTPEDtlrtlvgtlrttrtQQAELQSN  87
            C+ + TTE    ++ N L+++S ++L+ALG+EGDT+ DTLRTL+G+LR  R++QA L+ +
Sbjct  28   CGLKDTTEPEPAKTTNALTELSQDDLKALGIEGDTSADTLRTLIGALRDVRARQAVLDEQ  87

Query  88   IDKVLKENEALRKRNTNVSGQVNEAVAGFqkqaqqrqqqlqqeqqTLMGKIQTLTDQLAG  147
               ++ EN+ L+  N++V+ Q+++AV +     Q+ ++ L++++  L+ K++ LT+ L +
Sbjct  88   NKALISENNKLKGENSSVGLQISNAVNA---AKQETNEALEKQKTFLLEKLNDLTGTLKS  144

Query  148  ---NKDKAKSDSDIPlglgldgmgagegSAAPGQDGLMWVGPKDMKEPDPRNPNSAKDGP  204
               N D   ++S    ++ ++     E ++++ Q+ ++W++P+D K  + + ++S +D  
Sbjct  145  QGQNTDMVSTGSSSGTDFPVGLGLDPENASSATQGEVIWISPQDAKKTEGQ-SQSDNDKF  203

Query  205  QFPTSFLSYNAITRQKAAYEQQVKGRT--NEKGGEENAEPVFTLPENSTLVGSRSMTALL  262
             FPTSFL  N+++RQ+A Y++ VK +   + +G+E ++ PV+TLPENSTLVGS++MTAL+
Sbjct  204  TFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNGAESDTRPVYTLPENSTLVGSKAMTALI  263

Query  263  GRVPINGTVTDPYPFKLMIGKDNLTANGIELPDVEGAIVSGTASGDWTLSCVRGQVNSIT  322
            GR+PIN+ VTDPYPFK++ GKDNLTANGIELPDVEGAIVSGTA+GD  LSCVRG ++SIT
Sbjct  264  GRIPINDKVTDPYPFKVLNGKDNLTANGIELPDVEGAIVSGTATGDMVLSCVRGTIHSIT  323

Query  323  FVFADGTVRTLPHPDTNMKAnssnnsgnsgKDVSTTAGIGWISDDNGIPCIGGERKSNAL  382
            FVF+DG +RTLP+P +N ++       N+  + +  ++IGWISD+NGIPCI+GERKSNA 
Sbjct  324  FVFSDGRIRTLPRPVANTQG-------NNNDNAGDRGSIGWISDNNGIPCISGERKSNAS  376

Query  383  TYLPTIaalsaasaaGEGISQGQYTTQNNVN-GISDTMTGNAGQAVLGKALSGGMKETAD  441
            TYLPT+A L+ +S+AG++++Q QYTTQNNVN G++ ++TGNAGQAVLG++L+GG KE +D
Sbjct  377  TYLPTVALLGMGSSAGDALTQNQYTTQNNVNGGVTSALTGNAGQAVLGQTLGGGFKEVTD  436

Query  442  WVRERYGMMFDAVYVPPGQKLAVHITRQLAIDFETKGRKVRYDFSLPGEDG  492
            WV++RYG  FDAVYVPPG ++A+HITRQLA+D+E  GRKVRYDFSLPG +G
Sbjct  437  WVKQRYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKVRYDFSLPGTGG  487

39) Pecwa_0658 in NC_013421


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  357 bits (1342),  Expect = 9e-100, Method: Compositional matrix adjust.
 Identities = 270/511 (53%), Positives = 385/511 (76%), Gaps = 27/511 (5%)

Query  1    MKMQSNMLVKLAVPLTLLVTVFIGLKACS-PDKAQQQPDTTAKNDAILNDVTPEQLRALG  59
            M++++N L+K+ +P+ ++V  FIG+KAC+  D ++ +P   AK    L +++ ++L+ALG
Sbjct  1    MQIKANGLMKVLLPVLIVVVCFIGVKACGLKDTTEPEP---AKTTNALTELSQDDLKALG  57

Query  60   IEGDTPEDTLRTLIGRLNTVTTKQDRLDAENKTLAEENKRLKQTNQNVDERIGQAIANAk  119
            IEGDT+ DTLRTLIG L  V ++Q  LD +NK+L  EN++LK  N +V+ +I++A+  AK
Sbjct  58   IEGDTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENSSVGLQISNAVNAAK  117

Query  120  teesseksqlksqvqslsstvsdlvqqLKEVgtpgstssapsgNHVGPGSDIPIGLGLDG  179
             E +    + K+ +    +        L     + + ++   +   ++G+D+P+GLGLD 
Sbjct  118  QETNEALEKQKTFLLEKLND-------LTGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDP  170

Query  180  DFTGQVTPSGSSGTDG-LRWVEPIDAVAVDASGKPVTEGSSNRAAGFTFATSFLEENPVT  238
            +       ++SS+T+G + W+ P DA   ++     +++ +++   FTF+TSFL++NPV+
Sbjct  171  E-------NASSATQGEVIWISPQDAKKTEGQ----SQSDNDK---FTFPTSFLDDNPVS  216

Query  239  RQQAELARQAGNGQTLSGNNASEGPVEPVYTLPENSTLIGSRAMTALLGRVPVDGKVTDP  298
            RQ+AE  R   N Q L GN ++E+   PVYTLPENSTL+GS+AMTAL+GR+P+++KVTDP
Sbjct  217  RQRAEYDRVVKNKQELDGN-GAESDTRPVYTLPENSTLVGSKAMTALIGRIPINDKVTDP  275

Query  299  YPFKILIGKDNLTANGIDLPDVQGAIVSGTATGDWTLSCVRGSVSSITFVFSDGTVRTLP  358
            YPFK+L GKDNLTANGI+LPDV+GAIVSGTATGD  LSCVRG++ SITFVFSDG +RTLP
Sbjct  276  YPFKVLNGKDNLTANGIELPDVEGAIVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTLP  335

Query  359  RPsgqtegnnsqnsnnggsigwisDENGIPCLSGERKSNASTYLPTlfalsassaageal  418
            RP ++T+GNN++N+ + GSIGWISD+NGIPC+SGERKSNASTYLPT+  L+ +S+AG+AL
Sbjct  336  RPVANTQGNNNDNAGDRGSIGWISDNNGIPCISGERKSNASTYLPTVALLGMGSSAGDAL  395

Query  419  aqnqnttqgngfggvtSSLTGDAGQAVMGKAISGGMQETVDWVKARYGQTFDAVYVPPGM  478
            +QNQ TTQ N  GGVTS+LTG+AGQAV+G++++GG +E  DWVK RYGQTFDAVYVPPG 
Sbjct  396  TQNQYTTQNNVNGGVTSALTGNAGQAVLGQTLGGGFKEVTDWVKQRYGQTFDAVYVPPGA  455

Query  479  KVAVHITRQLAIDYEEKGRKVKYDFNLGQSG  509
            +VA+HITRQLA+DYE+ GRKV+YDF+L  +G
Sbjct  456  NVAIHITRQLAVDYEDHGRKVRYDFSLPGTG  486

40) PANA5342_3977 in NC_016816


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  351 bits (1317),  Expect = 1e-97, Method: Compositional matrix adjust.
 Identities = 248/487 (51%), Positives = 345/487 (71%), Gaps = 20/487 (4%)

Query  24   VGLKSCSDSKDKATSTQKTTNAALKDLSPDELKALGVEGDTPQDTLRTIVGNFRRVQDRL  83
            +G+K+C+  KD + +    T  AL +LS D+LKALG+EGDT+ DTLRT++G +R V+ R 
Sbjct  23   IGVKACG-LKDTTEPEPAKTTNALTELSQDDLKALGIEGDTSADTLRTLIGALRDVRARQ  81

Query  84   DTLADDNKKLNEQNADLKKTNSNVDAQIneavanaraeeaekrakLSAQVSDLSSQVSQM  143
              L ++NK L  +N  LK  NS+V+ QI++AV  A+ E  E    L  Q + L  +++++
Sbjct  82   AVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQETNEA---LEKQKTFLLEKLNDL  138

Query  144  LEQLKNG--NSGSPAKPTSPGSDIPIGLGYDNGTSGSVAMSAPASDGLQWVEPKDGIPVD  201
               LK+   N++  +  +S+G+D+P+GLG D   +     S+++ + + W+ P+D+   +
Sbjct  139  TGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDPENA-----SSATQGEVIWISPQDAKKTE  193

Query  202  ASGKPVNDSNKNsatgfsfassfgeagdagKQAGAAVSTAVSQAVPDAVKPVEPVFTLPE  261
            +     ++S+++  T  +        +    + +  V         +A     PV+TLPE
Sbjct  194  GQ----SQSDNDKFTFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNGAESDTRPVYTLPE  249

Query  262  NSTLVGSRAMTALLGRVPIDGKVTDPYPFKVMLGKDNLTANGIELPDVQGAIVSGTATGD  321
            NSTLVGS+AMTAL+GR+PI++KVTDPYPFKV+ GKDNLTANGIELPDV+GAIVSGTATGD
Sbjct  250  NSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNGKDNLTANGIELPDVEGAIVSGTATGD  309

Query  322  WTLSCVRGSITSITFVFADGTVRTLPSPDsqnggsnnqnsqnssgngnnsIGWLSDDNGI  381
              LSCVRG+I SITFVF+DG +RTLP P      +N Q ++N ++ +  SIGW+SD+NGI
Sbjct  310  MVLSCVRGTIHSITFVFSDGRIRTLPRP-----VANTQGNNNDNAGDRGSIGWISDNNGI  364

Query  382  PCISGTRKSNASTYLPTISllagaaaagdalSQNQMTGQTNAMGGVTQTLTGDAGQAVLG  441
            PCISG RKSNASTYLPT++LL+ +++AGDAL+QNQ T Q N  GGVT +LTG+AGQAVLG
Sbjct  365  PCISGERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQNNVNGGVTSALTGNAGQAVLG  424

Query  442  KSLSGSMKETVDWVKQRYGQTFDAIYVPPGQTVALHITRQLAIDYEEKGRKVKYDFSLAG  501
            ++L+G+ KE  DWVKQRYGQTFDA+YVPPG  VA+HITRQLA+DYE+ GRKV+YDFSL+G
Sbjct  425  QTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKVRYDFSLPG  484

Query  502  SGTGDGL  508
            +G   GL
Sbjct  485  TGGHYGL  491

41) PAJ_2503 in NC_017531


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  351 bits (1319),  Expect = 6e-98, Method: Compositional matrix adjust.
 Identities = 250/487 (52%), Positives = 342/487 (71%), Gaps = 20/487 (4%)

Query  24   VGVKSCsdskekttstqkttNAALKDLSPDDLKALGVEGDTPQDTLRTIVGNFRRVQDRL  83
            +GVK+C+          KTTNA L +LS DDLKALG+EGDT+ DTLRT++G +R V+ R 
Sbjct  23   IGVKACGLKDTTEPEPAKTTNA-LTELSQDDLKALGIEGDTSADTLRTLIGALRDVRARQ  81

Query  84   DTLADNNKKLNEENADLKKTNSNVDAQINEAVANARADEADKRAKLSAQVSDLSSQVGQM  143
              L ++NK L  EN  LK  NS+V+ QI++AV  A+ +  +    L  Q + L  ++ ++
Sbjct  82   AVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQETNEA---LEKQKTFLLEKLNDL  138

Query  144  LEQLKNKNAATP--DKSSATGSDIPIGLGYDNGTSGSVAMSAPASDGLQWVEPKDGLPVD  201
               LK++   T     +S++G+D+P+GLG D   +     S+++ + + W+ P+D+   +
Sbjct  139  TGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDPENA-----SSATQGEVIWISPQDAKKTE  193

Query  202  ASGKPVNDSNKNsatgfsfassfgeagdagKQAGAAVSTAVSQavpdavkpvdpvFTLPE  261
            +     ++S+++  T  +        +    + +  V         +A     PV+TLPE
Sbjct  194  GQ----SQSDNDKFTFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNGAESDTRPVYTLPE  249

Query  262  NSTLVGSRAMTALLGRVPIDGKVTDPYPFKVMLGKDNLTANGIELPDVQGAIVSGTATGD  321
            NSTLVGS+AMTAL+GR+PI++KVTDPYPFKV+ GKDNLTANGIELPDV+GAIVSGTATGD
Sbjct  250  NSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNGKDNLTANGIELPDVEGAIVSGTATGD  309

Query  322  WTLSCVRGSITSITFVFADGTVRTLPSPDsqnggsnnqnshnssgngnnsIGWLSDDNGI  381
              LSCVRG+I SITFVF+DG +RTLP P      +N Q ++N ++ +  SIGW+SD+NGI
Sbjct  310  MVLSCVRGTIHSITFVFSDGRIRTLPRP-----VANTQGNNNDNAGDRGSIGWISDNNGI  364

Query  382  PCISGTRKSNASTYLPTISllagaaaagdalSQNQMTGQTNAMGGVTQTLTGDAGQAVLG  441
            PCISG RKSNASTYLPT++LL+ +++AGDAL+QNQ T Q N  GGVT +LTG+AGQAVLG
Sbjct  365  PCISGERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQNNVNGGVTSALTGNAGQAVLG  424

Query  442  KSLSGSMKETVDWVKQRYGQTFDAIYVPPGQTVALHITRQLAIDYEEKGRKVKYDFSLAG  501
            ++L+G+ KE  DWVKQRYGQTFDA+YVPPG  VA+HITRQLA+DYE+ GRKV+YDFSL+G
Sbjct  425  QTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKVRYDFSLPG  484

Query  502  SGTGDGL  508
            +G   GL
Sbjct  485  TGGHYGL  491

42) PAGR_g3847 in NC_017554


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  321 bits (1204),  Expect = 6e-89, Method: Compositional matrix adjust.
 Identities = 239/462 (52%), Positives = 331/462 (72%), Gaps = 19/462 (4%)

Query  44   NAALKDLTPDELKALGVEGDTPQDTLRTIVGNFRRVQDRLDTLASDnkklneenkelkkT  103
              AL +L+ D+LKALG+EGDT+ DTLRT++G +R V+ R   L  +NK L  EN+ LK  
Sbjct  42   TNALTELSQDDLKALGIEGDTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGE  101

Query  104  NGNVDAQINeavanaraeeaekrarlsaQVSDLSSQVGQMLEQLKNG--NSGSPAKPTSP  161
            N++V+ QI++AV  A+ E  E   +   Q + L  ++ ++   LK+   N++  +  +S+
Sbjct  102  NSSVGLQISNAVNAAKQETNEALEK---QKTFLLEKLNDLTGTLKSQGQNTDMVSTGSSS  158

Query  162  GSDIPIGLGYDNGTSGSVAMSSPASDGLQWVEPKDGIPVDASGKPVNDSNKNsatgfsfa  221
            G+D+P+GLG D   +     SS++ + + W+ P+D+   ++ +    +S+++  T  +  
Sbjct  159  GTDFPVGLGLDPENA-----SSATQGEVIWISPQDAKKTEGQS----QSDNDKFTFPTSF  209

Query  222  ssfgeagdagKQAGTAVSTAVSQavpdavkpvdpvFTLPENSTLVGSRAMTALLGRVPID  281
                  +    + +  V         +A     PV+TLPENSTLVGS+AMTAL+GR+PI+
Sbjct  210  LDDNPVSRQRAEYDRVVKNKQELDGNGAESDTRPVYTLPENSTLVGSKAMTALIGRIPIN  269

Query  282  GKVTDPYPFKVMLGKDNLTANGIELPDVQGAIVSGTATGDWTLSCVRGSITSITFVFADG  341
            +KVTDPYPFKV+ GKDNLTANGIELPDV+GAIVSGTATGD  LSCVRG+I SITFVF+DG
Sbjct  270  DKVTDPYPFKVLNGKDNLTANGIELPDVEGAIVSGTATGDMVLSCVRGTIHSITFVFSDG  329

Query  342  TVRTLPSPDsqnassnnqnsqnssgngnssIGWISDDNGIPCISGTRKSNASTYLPTISl  401
             +RTLP P      +N Q ++N ++ + +SIGWISD+NGIPCISG RKSNASTYLPT++L
Sbjct  330  RIRTLPRP-----VANTQGNNNDNAGDRGSIGWISDNNGIPCISGERKSNASTYLPTVAL  384

Query  402  lagaaaagdalSQNQMTGQTNAMGGVTQTLTGDAGQAVLGKSLSGSMKETVDWVKQRYGQ  461
            L+ +++AGDAL+QNQ T Q N  GGVT +LTG+AGQAVLG++L+G+ KE  DWVKQRYGQ
Sbjct  385  LGMGSSAGDALTQNQYTTQNNVNGGVTSALTGNAGQAVLGQTLGGGFKEVTDWVKQRYGQ  444

Query  462  TFDAIYVPPGQTVALHITRQLAIDYEEKGRRVKYDFSLAGSG  503
            TFDA+YVPPG  VA+HITRQLA+DYE+ GR+V+YDFSL+G+G
Sbjct  445  TFDAVYVPPGANVAIHITRQLAVDYEDHGRKVRYDFSLPGTG  486

43) UMN179_00337 in NC_015460


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  309 bits (1160),  Expect = 2e-85, Method: Compositional matrix adjust.
 Identities = 205/499 (42%), Positives = 339/499 (68%), Gaps = 45/499 (9%)

Query  1    MKLKQNGLLKiivpsavaiaviiGLKV--FKSEENATAQTQQYALYDLKPEELRALGIEG  58
            M++K NGL+K+++P  + +  +IG+K   +K   ++ +     AL +L  ++L+ALGIEG
Sbjct  1    MQIKANGLMKVLLPVLIVVVCFIGVKACGLKDTTEPEPAKTTNALTELSQDDLKALGIEG  60

Query  59   DTPQDTIRTLIGTIKRARQDIADVKAQNEALMKKNKTLTDKSESVDEQIQAALAQERNAM  118
            DT+ DT+RTLIG+++  R   A +  QN AL+  N+ L + + SV+ QI  A+   ++  
Sbjct  61   DTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQ--  118

Query  119  SIEFEQALQQRTESLTEELEKRLANLSALESKVQPSETKKDDANLFAAESGNGEDFPIG-  177
              E ++AL+++   L       L +L+ L + +++     +++++ ++ S++G DFP+G 
Sbjct  119  --ETNEALEKQKTFL-------LEKLNDLTGTLKSQG---QNTDMVSTGSSSGTDFPVGL  166

Query  178  ---------NTSGGMQWVMPADMQALDRNGNPVTAGQQAEQFGFPSLFSELDKSVLGKAH  228
                      T G + W+ P D +  + ++++     + ++F FP+ F  LD + +++ +
Sbjct  167  GLDPENASSATQGEVIWISPQDAKKTEGQSQS-----DNDKFTFPTSF--LDDNPVSRQR  219

Query  229  EDF--TGKKK---GTSAEEKPPVPIYTLPENSTLIGSVAMTALLGRVPIDGVVNDPYPFK  283
             ++    K+K   + ++ E    P+YTLPENSTL+GS AMTAL+GR+PI++ V DPYPFK
Sbjct  220  AEYDRVVKNKQELDGNGAESDTRPVYTLPENSTLVGSKAMTALIGRIPINDKVTDPYPFK  279

Query  284  VLVGKENLTANGMMLPNVEGAILSGTASGDWTLSCVRGKVMSITLVFNDGRVRTWPQskr  343
            VL GK+NLTANG+ LP+VEGAI+SGTA+GD  LSCVRG + SIT+VF+DGR+RT P++  
Sbjct  280  VLNGKDNLTANGIELPDVEGAIVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTLPRPVA  339

Query  344  sssssnsD------GIGWISDPYGVPCVPGDRKTNAPEYLTSNFLLGGVAAAADAYSQSQ  397
            ++ ++N+D      +IGWISD  G+PC++G+RK+NA+ YL +  LLG  ++A+DA +Q+Q
Sbjct  340  NTQGNNNDNAGDRGSIGWISDNNGIPCISGERKSNASTYLPTVALLGMGSSAGDALTQNQ  399

Query  398  TTTVTD-GASVVSAVTGDQGKYLMGQALGAGLKDTTEWLRKRFGQTFDAIYVPPGHPVAI  456
             TT  +  ++V SA+TG+ G+ ++GQ+LG+G+K+ T+W+++R+GQTFDA+YVPPG  VAI
Sbjct  400  YTTQNNVNGGVTSALTGNAGQAVLGQTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAI  459

Query  457  HLTQSIDIDYEPNGRKVNY  475
            H+T+ + +DYE +GRKV Y
Sbjct  460  HITRQLAVDYEDHGRKVRY  478

44) SARI_03121 in NC_010067


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  286 bits (1071),  Expect = 2e-78, Method: Compositional matrix adjust.
 Identities = 199/431 (47%), Positives = 301/431 (70%), Gaps = 41/431 (9%)

Query  45   LSHDELKALGIEGDTPADTVATLVGQMKLWRKELETVKASNAALVQENQRLREREQNTDS  104
            LS+D+LKALGIEGDT+ADT+ TL+G ++  R     +   N AL+ EN++L+  + + + 
Sbjct  48   LSQDDLKALGIEGDTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENSSVGL  107

Query  105  RISEAINRQQTsasqqqnellnslqtqIQQLKG---------------NRTTDDSLAGLG  149
            +IS+A+N  +  +++  +     L  ++++L G               + +  D   GLG
Sbjct  108  QISNAVNAAKQETNEALEKQKTFLLEKLNDLTGTLKSQGQNTDMVSTGSSSGTDFPVGLG  167

Query  150  IDEPEAASGEP--LRWIAPADALPTDKNGRPLQPALAFPSAMHSPTPQP-----------  196
            +D  +A+S+    + WI+P DA  T+ ++++ +  ++FP++     P +           
Sbjct  168  LDPENASSATQGEVIWISPQDAKKTEGQSQSDNDKFTFPTSFLDDNPVSRQRAEYDRVVK  227

Query  197  ------EASPPAAVKPVYTLPQNSTLIGSVAMTALLGRIPLNGSVTDPYPFKVLIGRDNL  250
                    ++ +  +PVYTLP+NSTL+GS AMTAL+GRIP+N+ VTDPYPFKVL G+DNL
Sbjct  228  NKQELDGNGAESDTRPVYTLPENSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNGKDNL  287

Query  251  TANGIELPDIEGAVISGSATGDWTLSCVRGSLTSITFVFRDGTVRTLP-----AEGDKTG  305
            TANGIELPD+EGA++SG+ATGD  LSCVRG++ SITFVF DG +RTLP     ++G++ +
Sbjct  288  TANGIELPDVEGAIVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTLPRPVANTQGNNND  347

Query  306  SGTE-GNIGWLSDPHGLPCIPGERKSNAAEYIgsqfllagssaaaqalannqttstVE-D  363
            ++ + G+IGW+SD +G+PCI+GERKSNA+ Y+ +  LL+ +S+A++AL++NQ T+  + +
Sbjct  348  NAGDRGSIGWISDNNGIPCISGERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQNNVN  407

Query  364  GSITTALTGDSGQYVLGQALGGGLKESADWFKQRYGQMFDAIYVPPGQAVAIHITRQLAI  423
            G++T+ALTG++GQ VLGQ+LGGG+KE +DW KQRYGQ FDA+YVPPG  VAIHITRQLA+
Sbjct  408  GGVTSALTGNAGQAVLGQTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAV  467

Query  424  DYDPDGRRVNY  434
            DY+ +GR+V Y
Sbjct  468  DYEDHGRKVRY  478

45) Plav_3422 in NC_009719


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  282 bits (1056),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 194/480 (41%), Positives = 325/480 (68%), Gaps = 30/480 (6%)

Query  1    MRSNGLLKWLMIPVALLVLFIGVR---LFSGGGPSTLSQADAGSQLTPEEMKALGIEGDT  57
            +++NGL+K L+  + ++V FIGV+   L     P     ++A ++L+ +++KALGIEGDT
Sbjct  3    IKANGLMKVLLPVLIVVVCFIGVKACGLKDTTEPEPAKTTNALTELSQDDLKALGIEGDT  62

Query  58   PRDTVATLVAQVKQLRTELQTALSD-NKSqreenqrlrqrenSIDQRINAALEAERSNLR  116
            + DT+ TL++ ++++R+  Q+ L + NK+   EN++L+  ++S++ +I+ A++A +    
Sbjct  63   SADTLRTLIGALRDVRAR-QAVLDEQNKALISENNKLKGENSSVGLQISNAVNAAK----  117

Query  117  RDQQQAASERQQT------EGLLADLQ---RRLEAIGGRGGGHADLPVGLGL-RDGDEAG  166
             ++ + A E+Q+T      ++L + L+   +  + ++  +++ +D+PVGLGL  +   ++
Sbjct  118  -QETNEALEKQKTFLLEKLNDLTGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDPENASSA  176

Query  167  MEGGVRWVEPDDAKKAEARGSSSGAM-SFPTSF---GPAQRTLETTAETVANAGA--RAA  220
             +G V W+ P+DAKK+E+++ S     +FPTSF    P  R        V N       +
Sbjct  177  TQGEVIWISPQDAKKTEGQSQSDNDKFTFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNG  236

Query  221  GVKTAKAVYTVPTNSTLMGSVAMTALIGRVPIDGTVNDPYPFKVLVGPDNLTANGIDIPD  280
            +   +++VYT+P NSTL+GS AMTALIGR+PI++ V DPYPFKVL G DNLTANGI++PD
Sbjct  237  AESDTRPVYTLPENSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNGKDNLTANGIELPD  296

Query  281  VAGAVFSGTASGDWTLSCVRGQVRSITFVFHDGTIRTIP----EDREGNQQNNQQRDGLG  336
            V GA+ SGTA+GD  LSCVRG ++SITFVF DG IRT+P    + +  N++N  +R+++G
Sbjct  297  VEGAIVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTLPRPVANTQGNNNDNAGDRGSIG  356

Query  337  WISDPYGIPCVSGERRSNAQQYLGSQALITAAGAGVASLIESDSGQMSYVGSDGSIGTVG  396
            WISD  GIPC+SGER+SNA  YL + AL+  ++++  +L +++    + V ++ + +  G
Sbjct  357  WISDNNGIPCISGERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQNNVNGGVTSALTG  416

Query  397  ISGQEAVGRILAGGVQEMSNWVNKLYGQAFAAVYVQPGAKVAVHLEKPLAIDFDPEGRKV  456
             +GQ  +G+ L+GG +E+++WV++ YGQ+F AVYV PGA+VA+H+ + LA+D++ +GRKV
Sbjct  417  NAGQAVLGQTLGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKV  476

46) D7S_02308 in NC_017846


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  273 bits (1023),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 195/476 (41%), Positives = 310/476 (66%), Gaps = 57/476 (11%)

Query  17   ACGLMLWFLFSAPAPQPSTKDILNIALKDLSPEQLRAMGIEGDTANDTVRTLIG---KSK  73
            ACGL       +  P+P+       AL +LS ++L+A+GIEGDT+ DT+RTLIG     +
Sbjct  27   ACGLK-----DTTEPEPAKT---TNALTELSQDDLKALGIEGDTSADTLRTLIGALRDVR  78

Query  74   ANEKLLQEIVSKNEKLIVENSRLQKKQDDVDYQIQQSVQA---EAAALLDQFNA-LKDEL  129
            A + +L+E   +N  LI EN++L+  +  V+ QI ++V+A   E+   L++ ++ L + L
Sbjct  79   ARQAVLDE---QNKALISENNKLKGENSSVGLQISNAVNAAKQETNEALEKQKTFLLEKL  135

Query  130  LQFKAESKPETTNNSVNGIGYN-GESLPIN---GATGETTNTDNSIRWLQPSDRIAMDSN  185
             ++ +  K++  N  + + G + G  +P+    ++   ++ T+  + W+ P D  A  ++
Sbjct  136  NDLTGTLKSQGQNTDMVSTGSSSGTDFPVGLGLDPENASSATQGEVIWISPQD--AKKTE  193

Query  186  GNLLPLDNQTGATKFGFPSKF--------KATENKNALKATP-FTAENVEKKNKIVPFFT  236
            G     ++Q++  KF FP+ F        + +E    +K    + ++  E   +  P +T
Sbjct  194  G-----QSQSDNDKFTFPTSFLDDNPVSRQRAEYDRVVKNKQELDGNGAESDTR--PVYT  246

Query  237  IAANSTLTNSIALTALVGRVPIDNNVTEPYPFKLLIGRDNLIANGIELPDIEGAIVSGTA  296
            ++ NSTL  S A+TAL+GR+PI+++VT+PYPFK+L G+DNL ANGIELPD+EGAIVSGTA
Sbjct  247  LPENSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNGKDNLTANGIELPDVEGAIVSGTA  306

Query  297  TGDWTLSCVRGDVKSLTFVFTDGRI-------VTTAGEEN--------IGWLSDPHGVPC  341
            TGD  LSCVRG + S+TFVF+DGRI         T G++N        IGW+SD +G+PC
Sbjct  307  TGDMVLSCVRGTIHSITFVFSDGRIRTLPRPVANTQGNNNDNAGDRGSIGWISDNNGIPC  366

Query  342  IQGSRKTNAAEYLSTNFLLagasaaaqgvaqsqtttvvD-GSAVIGAVTGNNGKYILGQA  400
            I G RK+NA+ YL+T  LL+ +S+A+++++Q+Q TT  +  ++V +A+TGN G+ +LGQ+
Sbjct  367  ISGERKSNASTYLPTVALLGMGSSAGDALTQNQYTTQNNVNGGVTSALTGNAGQAVLGQT  426

Query  401  LGSGLKDTAEWFRQRYGQTFDAVYVPPGQEVAVHINKTIEIDYDKLGRKVKYGQFS  456
            LG+G+K+ ++W +QRYGQTFDAVYVPPG +VA+HI + + +DY+  GRKV+Y +FS
Sbjct  427  LGGGFKEVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKVRY-DFS  481

47) HD0935 in NC_002940


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  268 bits (1001),  Expect = 7e-73, Method: Compositional matrix adjust.
 Identities = 185/451 (42%), Positives = 295/451 (66%), Gaps = 40/451 (8%)

Query  46   TSLKDLSPDTLRAMGIEGDTPNDTVRTLIGKSKANEKLINEVISKNEK-LIAETSRLQKK  104
             +L +LS D L+A+GIEGDT+ DT+RTLIG  + + +  + V+  ++K LI+E ++L+  
Sbjct  43   NALTELSQDDLKALGIEGDTSADTLRTLIGALR-DVRARQAVLDEQNKALISENNKLKGE  101

Query  105  QDDVDYQIQQAVQSEAGALVDELQTLKNEILQ-LKD-----STQKQAASVIGNNGSNEA-  157
            +  V+ QI +AV++      + L+  K  +L+ L+D      +Q Q + +++  +S+ + 
Sbjct  102  NSSVGLQISNAVNAAKQETNEALEKQKTFLLEKLNDLTGTLKSQGQNTDMVSTGSSSGTD  161

Query  158  LPIngatnaggdtttdnntVRWVTPSDQIAMDDKGNLLPLGNIGTSSNAKFGFPVDF---  214
            +P+  + ++   +++ +  V W++P D    +++++         S N KF FP  F   
Sbjct  162  FPVGLGLDPENASSATQGEVIWISPQDAKKTEGQSQ---------SDNDKFTFPTSFLDD  212

Query  215  --KPKSSPDTPNSVKTQPFSEENNSVTAKKGKEVPFFTIAPNSTLTNSVAMTALVGRVPI  272
               ++  ++    VK +   + N + +  +    P +T++ NSTL  S AMTAL+GR+PI
Sbjct  213  NPVSRQRAEYDRVVKNKQELDGNGAESDTR----PVYTLPENSTLVGSKAMTALIGRIPI  268

Query  273  GNNVTEPYPFKLLIGRDNLIANGIELPDIEGAIVSGTATGDWTLSCVRGDVKSLTFVFTD  332
             ++VT+PYPFK+L G+DNL ANGIELPD+EGAIVSGTATGD  LSCVRG + S+TFVF+D
Sbjct  269  NDKVTDPYPFKVLNGKDNLTANGIELPDVEGAIVSGTATGDMVLSCVRGTIHSITFVFSD  328

Query  333  GRI------VSTDSGDSKSGE----NIGWLSDPYGIPCIQGTRKTNAPEYLGTNFLLaga  382
            GRI      V+   G+++       +IGW+SD  GIPCI G RK+NA+ YL T  LL+ +
Sbjct  329  GRIRTLPRPVANTQGNNNDNAGDRGSIGWISDNNGIPCISGERKSNASTYLPTVALLGMG  388

Query  383  saaaqgmaqs--qtttVVDGNAVIGAVTGNNGKYILGQALGSGLKDTADWFRQRYGQTFD  440
            S+A+++++Q+   T   V+G +V +A+TGN G+ +LGQ+LG+G+K+ +DW +QRYGQTFD
Sbjct  389  SSAGDALTQNQYTTQNNVNG-GVTSALTGNAGQAVLGQTLGGGFKEVTDWVKQRYGQTFD  447

Query  441  AVYVPPGQEVAVHINKEIKIDYSTGGRKVKY  471
            AVYVPPG +VA+HI +++ +DY   GRKV+Y
Sbjct  448  AVYVPPGANVAIHITRQLAVDYEDHGRKVRY  478

48) HIB_01090 in NC_016809


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  265 bits (990),  Expect = 5e-72, Method: Compositional matrix adjust.
 Identities = 181/447 (41%), Positives = 289/447 (65%), Gaps = 50/447 (11%)

Query  48   SFKDLSPEELRAMGIEGDTSKDTVRTLIGKVKEHNKRFDEVILQNER--LVKENEQLKNQ  105
            ++ +LS ++L+A+GIEGDTS DT+RTLIG +++   R  + +L+++   L+ EN++LK +
Sbjct  44   ALTELSQDDLKALGIEGDTSADTLRTLIGALRDVRAR--QAVLDEQNKALISENNKLKGE  101

Query  106  ANNTDYQIQQAVQAETGA-----------LINEINALKDqvvqagnqvvgngnaqanpna  154
             ++ + QI +AV+A               L++ +N L + +   G++    + + ++   
Sbjct  102  NSSVGLQISNAVNAAKQETNEALEKQKTFLLEKLNDLTGTLKSQGQNTDMVSTGSSSGTD  161

Query  155  plpinG-ATTGPQVETRGGINWVNPSDMPTTDRQGNALQGIGVNGAGIGFPKTF--DNNV  211
                 G     +   T+G + W++P D   T+ Q+++      +   + FP +F  DN V
Sbjct  162  FPVGLGLDPENASSATQGEVIWISPQDAKKTEGQSQS------DNDKFTFPTSFLDDNPV  215

Query  212  NDIR-------KSNDGLQSSTGNNAIFNTATPFFTIAANSTLTNSVAMTALVGRVPIDNK  264
            +  R       K+++ L+++ +++     + P +T++ NSTL  S AMTAL+GR+PI++K
Sbjct  216  SRQRAEYDRVVKNKQELDGNGAESD----TRPVYTLPENSTLVGSKAMTALIGRIPINDK  271

Query  265  VTEPYPFKLLIGRDNLIANGIELPDIEGAIVSGTASGDWTLSCVRGDVKSLTFVFSDGRI  324
            VT+PYPFK+L G+DNL ANGIELPD+EGAIVSGTA+GD  LSCVRG + S+TFVFSDGRI
Sbjct  272  VTDPYPFKVLNGKDNLTANGIELPDVEGAIVSGTATGDMVLSCVRGTIHSITFVFSDGRI  331

Query  325  ------------VSTDNSDDK--IGWLSDPHGVPCIPGERRTNAPEYLTT-NFFltgasa  369
                         + DN++D+  IGW+SD +G+PCI+GER++NA+ YL T  ++  G+SA
Sbjct  332  RTLPRPVANTQGNNNDNAGDRGSIGWISDNNGIPCISGERKSNASTYLPTVALLGMGSSA  391

Query  370  aaqglsssqstTVVDGGAVIGAVTGNNGKYILGQALGGGLRETADWFRQRYGQMFDAVYV  429
            +     +  +T     G+V +A+TGN G+ +LGQ+LGGG++E +DW +QRYGQ FDAVYV
Sbjct  392  GDALTQNQYTTQNNVNGGVTSALTGNAGQAVLGQTLGGGFKEVTDWVKQRYGQTFDAVYV  451

Query  430  PPGKEVAVHIEKQIDIDYDRMSRKVKY  456
            PPG +VA+HI +Q+ +DY+  +RKV+Y
Sbjct  452  PPGANVAIHITRQLAVDYEDHGRKVRY  478

49) NTHI0132 in NC_007146


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  265 bits (990),  Expect = 5e-72, Method: Compositional matrix adjust.
 Identities = 181/447 (41%), Positives = 289/447 (65%), Gaps = 50/447 (11%)

Query  48   SFKDLSPEELRAMGIEGDTSKDTVRTLIGKVKEHNKRFDEVILQNER--LVKENEQLKNQ  105
            ++ +LS ++L+A+GIEGDTS DT+RTLIG +++   R  + +L+++   L+ EN++LK +
Sbjct  44   ALTELSQDDLKALGIEGDTSADTLRTLIGALRDVRAR--QAVLDEQNKALISENNKLKGE  101

Query  106  ANNTDYQIQQAVQAETGA-----------LINEINALKDqvvqagnqvvgngnaqanpna  154
             ++ + QI +AV+A               L++ +N L + +   G++    + + ++   
Sbjct  102  NSSVGLQISNAVNAAKQETNEALEKQKTFLLEKLNDLTGTLKSQGQNTDMVSTGSSSGTD  161

Query  155  plpinG-ATTGPQVETRGGINWVNPSDMPTTDRQGNALQGIGVNGAGIGFPKTF--DNNV  211
                 G     +   T+G + W++P D   T+ Q+++      +   + FP +F  DN V
Sbjct  162  FPVGLGLDPENASSATQGEVIWISPQDAKKTEGQSQS------DNDKFTFPTSFLDDNPV  215

Query  212  NDIR-------KSNDGLQSSTGNNAIFNTATPFFTIAANSTLTNSVAMTALVGRVPIDNK  264
            +  R       K+++ L+++ +++     + P +T++ NSTL  S AMTAL+GR+PI++K
Sbjct  216  SRQRAEYDRVVKNKQELDGNGAESD----TRPVYTLPENSTLVGSKAMTALIGRIPINDK  271

Query  265  VTEPYPFKLLIGRDNLIANGIELPDIEGAIVSGTASGDWTLSCVRGDVKSLTFVFSDGRI  324
            VT+PYPFK+L G+DNL ANGIELPD+EGAIVSGTA+GD  LSCVRG + S+TFVFSDGRI
Sbjct  272  VTDPYPFKVLNGKDNLTANGIELPDVEGAIVSGTATGDMVLSCVRGTIHSITFVFSDGRI  331

Query  325  ------------VSTDNSDDK--IGWLSDPHGVPCIPGERRTNAPEYLTT-NFFltgasa  369
                         + DN++D+  IGW+SD +G+PCI+GER++NA+ YL T  ++  G+SA
Sbjct  332  RTLPRPVANTQGNNNDNAGDRGSIGWISDNNGIPCISGERKSNASTYLPTVALLGMGSSA  391

Query  370  aaqglsssqstTVVDGGAVIGAVTGNNGKYILGQALGGGLRETADWFRQRYGQMFDAVYV  429
            +     +  +T     G+V +A+TGN G+ +LGQ+LGGG++E +DW +QRYGQ FDAVYV
Sbjct  392  GDALTQNQYTTQNNVNGGVTSALTGNAGQAVLGQTLGGGFKEVTDWVKQRYGQTFDAVYV  451

Query  430  PPGKEVAVHIEKQIDIDYDRMSRKVKY  456
            PPG +VA+HI +Q+ +DY+  +RKV+Y
Sbjct  452  PPGANVAIHITRQLAVDYEDHGRKVRY  478

50) R2866_0583 in NC_017451


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  265 bits (990),  Expect = 5e-72, Method: Compositional matrix adjust.
 Identities = 181/447 (41%), Positives = 289/447 (65%), Gaps = 50/447 (11%)

Query  48   SFKDLSPEELRAMGIEGDTSKDTVRTLIGKVKEHNKRFDEVILQNER--LVKENEQLKNQ  105
            ++ +LS ++L+A+GIEGDTS DT+RTLIG +++   R  + +L+++   L+ EN++LK +
Sbjct  44   ALTELSQDDLKALGIEGDTSADTLRTLIGALRDVRAR--QAVLDEQNKALISENNKLKGE  101

Query  106  ANNTDYQIQQAVQAETGA-----------LINEINALKDqvvqagnqvvgngnaqanpna  154
             ++ + QI +AV+A               L++ +N L + +   G++    + + ++   
Sbjct  102  NSSVGLQISNAVNAAKQETNEALEKQKTFLLEKLNDLTGTLKSQGQNTDMVSTGSSSGTD  161

Query  155  plpinG-ATTGPQVETRGGINWVNPSDMPTTDRQGNALQGIGVNGAGIGFPKTF--DNNV  211
                 G     +   T+G + W++P D   T+ Q+++      +   + FP +F  DN V
Sbjct  162  FPVGLGLDPENASSATQGEVIWISPQDAKKTEGQSQS------DNDKFTFPTSFLDDNPV  215

Query  212  NDIR-------KSNDGLQSSTGNNAIFNTATPFFTIAANSTLTNSVAMTALVGRVPIDNK  264
            +  R       K+++ L+++ +++     + P +T++ NSTL  S AMTAL+GR+PI++K
Sbjct  216  SRQRAEYDRVVKNKQELDGNGAESD----TRPVYTLPENSTLVGSKAMTALIGRIPINDK  271

Query  265  VTEPYPFKLLIGRDNLIANGIELPDIEGAIVSGTASGDWTLSCVRGDVKSLTFVFSDGRI  324
            VT+PYPFK+L G+DNL ANGIELPD+EGAIVSGTA+GD  LSCVRG + S+TFVFSDGRI
Sbjct  272  VTDPYPFKVLNGKDNLTANGIELPDVEGAIVSGTATGDMVLSCVRGTIHSITFVFSDGRI  331

Query  325  ------------VSTDNSDDK--IGWLSDPHGVPCIPGERRTNAPEYLTT-NFFltgasa  369
                         + DN++D+  IGW+SD +G+PCI+GER++NA+ YL T  ++  G+SA
Sbjct  332  RTLPRPVANTQGNNNDNAGDRGSIGWISDNNGIPCISGERKSNASTYLPTVALLGMGSSA  391

Query  370  aaqglsssqstTVVDGGAVIGAVTGNNGKYILGQALGGGLRETADWFRQRYGQMFDAVYV  429
            +     +  +T     G+V +A+TGN G+ +LGQ+LGGG++E +DW +QRYGQ FDAVYV
Sbjct  392  GDALTQNQYTTQNNVNGGVTSALTGNAGQAVLGQTLGGGFKEVTDWVKQRYGQTFDAVYV  451

Query  430  PPGKEVAVHIEKQIDIDYDRMSRKVKY  456
            PPG +VA+HI +Q+ +DY+  +RKV+Y
Sbjct  452  PPGANVAIHITRQLAVDYEDHGRKVRY  478

51) PARA_11860 in NC_015964


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  264 bits (987),  Expect = 8e-72, Method: Compositional matrix adjust.
 Identities = 181/447 (41%), Positives = 289/447 (65%), Gaps = 50/447 (11%)

Query  48   SLKDLSPEELRSMGLEGDTSKDTVRTLIGKVKENNKRFDEVIL--QNDRLVKENEQLKNQ  105
            +L +LS ++L+++G+EGDTS DT+RTLIG +++   R  + +L  QN  L+ EN++LK +
Sbjct  44   ALTELSQDDLKALGIEGDTSADTLRTLIGALRDVRAR--QAVLDEQNKALISENNKLKGE  101

Query  106  ANNTDYQIQQAVQAETGA-----------LINEINALKDqvvqagnqvvgngnaqanpna  154
             ++ + QI +AV+A               L++ +N L + +   G++    + + ++   
Sbjct  102  NSSVGLQISNAVNAAKQETNEALEKQKTFLLEKLNDLTGTLKSQGQNTDMVSTGSSSGTD  161

Query  155  plpinG-ATTGPQVETRGGINWVNPSDMPTTDSQGNALQGIGVNGAGIGFPKTF--DNNV  211
                 G     +   T+G + W++P D   T++Q+++      +   + FP +F  DN V
Sbjct  162  FPVGLGLDPENASSATQGEVIWISPQDAKKTEGQSQS------DNDKFTFPTSFLDDNPV  215

Query  212  NDIR-------KSNDGLQSSTGNNAIFNTATPFFTIAANSTLTNSVAMTALVGRVPIDNN  264
            +  R       K+++ L+++ +++     + P +T++ NSTL  S AMTAL+GR+PI+++
Sbjct  216  SRQRAEYDRVVKNKQELDGNGAESD----TRPVYTLPENSTLVGSKAMTALIGRIPINDK  271

Query  265  VTEPYPFKLLIGRDNLIANGIELPDIEGAIVSGTASGDWTLSCVRGDVKSLTFVFSDGRI  324
            VT+PYPFK+L G+DNL ANGIELPD+EGAIVSGTA+GD  LSCVRG + S+TFVFSDGRI
Sbjct  272  VTDPYPFKVLNGKDNLTANGIELPDVEGAIVSGTATGDMVLSCVRGTIHSITFVFSDGRI  331

Query  325  ------VSTDDSNNK--------IGWLSDPHGVPCIPGERRTNAPEYLTT-NFFltgasa  369
                  V+  ++NN+        IGW+SD +G+PCI+GER++NA+ YL T  ++  G+SA
Sbjct  332  RTLPRPVANTQGNNNDNAGDRGSIGWISDNNGIPCISGERKSNASTYLPTVALLGMGSSA  391

Query  370  aaqglsssqstTVVDGGAVIGAVTGNNGKYILGQALGGGLRETADWFRQRYGQMFDAVYV  429
            +     +  +T     G+V +A+TGN G+ +LGQ+LGGG++E +DW +QRYGQ FDAVYV
Sbjct  392  GDALTQNQYTTQNNVNGGVTSALTGNAGQAVLGQTLGGGFKEVTDWVKQRYGQTFDAVYV  451

Query  430  PPGKEVAVHIEKQIDIDYDRMSRKVKY  456
            PPG +VA+HI +Q+ +DY+  +RKV+Y
Sbjct  452  PPGANVAIHITRQLAVDYEDHGRKVRY  478

52) Tgr7_2857 in NC_011901


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  261 bits (976),  Expect = 6e-71, Method: Compositional matrix adjust.
 Identities = 187/460 (41%), Positives = 312/460 (68%), Gaps = 25/460 (5%)

Query  20   FIGVKLFSGDRGASPLPGDAGG---QLTADEMRALGIEGDTPHDTVATLVAQVRQLRTEL  76
            FIGVK  +    + P P+ +     +L+ D+++ALGIEGDT+ DT+ TL++ +R++R+  
Sbjct  22   FIGVKACGLKDTTEPEPAKTTNALTELSQDDLKALGIEGDTSADTLRTLIGALRDVRAR-  80

Query  77   QTALSD-NRNQRAENDrlrqrersieqriqNVLDTERAQLRQDREQTAS---ER-QQAQG  131
            Q+ L + N+   +EN++L+  + S+  +I N +++ + +  +  E+  +   E+ ++  G
Sbjct  81   QAVLDEQNKALISENNKLKGENSSVGLQISNAVNAAKQETNEALEKQKTFLLEKLNDLTG  140

Query  132  LLQDLQRQFEGLG-GRAGHTDLPIGLGLEDGDGQHFGRDGVRWIEPDDARPAEGRS-GSR  189
             L+   ++ + ++ G ++ TD+P+GLGL+  ++    ++ V WI P+DA+ +EG+S +  
Sbjct  141  TLKSQGQNTDMVSTGSSSGTDFPVGLGLDPENASSATQGEVIWISPQDAKKTEGQSQSDN  200

Query  190  NGFSFPNDF---SPVG------ETLDAASETLGRATGGAVGTSSLEAVYTVPSNSTLMGS  240
            + F+FP  F   +PV+      + +    + L+    G  + S   +VYT+P NSTL+GS
Sbjct  201  DKFTFPTSFLDDNPVSRQRAEYDRVVKNKQELD----GNGAESDTRPVYTLPENSTLVGS  256

Query  241  IAMTALIGRVPIDGTVNDPYPFKVVIGPDNLTANGIDIPDVAGAVVSGTASGDWTLSCVR  300
             AMTALIGR+PI++ V DPYPFKV+ G DNLTANGI++PDV GA+VSGTA+GD  LSCVR
Sbjct  257  KAMTALIGRIPINDKVTDPYPFKVLNGKDNLTANGIELPDVEGAIVSGTATGDMVLSCVR  316

Query  301  GQIRSITFVFEDGTIRTLPEESGRSSSNRSD-TGTQGGLGWISDPHGIPCVSGERRSNAQ  359
            G I+SITFVF DG IRTLP   + + +N +D +G +G++GWISD +GIPC+SGER+SNA 
Sbjct  317  GTIHSITFVFSDGRIRTLPRPVANTQGNNNDNAGDRGSIGWISDNNGIPCISGERKSNAS  376

Query  360  QYlgtqalitaagagaaslidsdsgRVSYVGSDGSIGTVGITANEAMGRILAGGVQEMSQ  419
             YL T AL+  +++++ +L +++    + V ++ + +  G +++  +G+ L+GG +E+++
Sbjct  377  TYLPTVALLGMGSSAGDALTQNQYTTQNNVNGGVTSALTGNAGQAVLGQTLGGGFKEVTD  436

Query  420  WVNKLYGQAFAAVYVEPGAKVAVHIEQPLTIDYDAKGRRV  459
            WV++ YGQ+F AVYV PGA+VA+HI + L++DY+  GR+V
Sbjct  437  WVKQRYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKV  476

53) F382_13585 in NC_021743


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  259 bits (969),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 182/452 (41%), Positives = 297/452 (66%), Gaps = 38/452 (8%)

Query  44   SIKDLTPEQVRSMGIQGDTPIDTLRTLVTT---VKSNERRMDE----LIDENRQLKQKED  96
            ++ +L+ ++++++GI+GDT+ DTLRTL+ +   V++ +  +DE    LI EN +LK  + 
Sbjct  44   ALTELSQDDLKALGIEGDTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENS  103

Query  97   LVNGRISDAVNNETRKLQEQIADLKMQLFDMATHVNNKSTAQESTPQAEAQPSMTTNKGF  156
             V  +IS+AVN   +  +E +   K  L++   ++     +Q    +     + ++  +F
Sbjct  104  SVGLQISNAVNAAKQETNEALEKQKTFLLEKLNDLTGTLKSQGQNTDM-VSTGSSSGTDF  162

Query  157  GTAGDKLPIGGASMPNVDIGGMYWVEPSDQIGLDAGGKAVSGNTLATKFGFPNDFKGGQT  216
              +   L ++  + ++   G + W+ P D  +  + G++ S+N    KF FP  F +++ 
Sbjct  163  PVG---LGLDPENASSATQGEVIWISPQD--AKKTEGQSQSDND---KFTFPTSFLDDNP  214

Query  217  TGNTEKKGLPFFPETDVVTGSQGTTGNSRGKNQITPVYTVPSNSTFLDSVAMTGLIGRIP  276
             +   ++   +     VV   Q   GN+ + ++  PVYT+P NST+++S AMT+LIGRIP
Sbjct  215  VS---RQRAEY---DRVVKNKQELDGNG-AESDTRPVYTLPENSTLVGSKAMTALIGRIP  267

Query  277  IDNKVSDAYPFKVLIGRENLIANGIELLDVEGAIVSGTATGDWTLSCVRGDVKSMTFVFN  336
            I++KV+D+YPFKVL G++NL ANGIEL DVEGAIVSGTATGD  LSCVRG + S+TFVF+
Sbjct  268  INDKVTDPYPFKVLNGKDNLTANGIELPDVEGAIVSGTATGDMVLSCVRGTIHSITFVFS  327

Query  337  DGRI------VSTT------NKGNSENIGWLSDSSGIPCVPGERKTNAPEYLGTNfflaa  384
            DGRI      V+ T      N G+  +IGW+SD++GIPC++GERK+NA+ YL T  +L+ 
Sbjct  328  DGRIRTLPRPVANTQGNNNDNAGDRGSIGWISDNNGIPCISGERKSNASTYLPTVALLGM  387

Query  385  asaaaqgfsqs--qtttVVDGNSVVGAVTGDQGKFILGQAIGGGLKESADWFRKRFAENF  442
            +S+A+++++Q+   T   V+G +V +A+TG+ G+ +LGQ++GGG+KE +DW ++R+++ F
Sbjct  388  GSSAGDALTQNQYTTQNNVNG-GVTSALTGNAGQAVLGQTLGGGFKEVTDWVKQRYGQTF  446

Query  443  DAVYVPPGHRVAIHIEKEIEIDYNSKGRKVKY  474
            DAVYVPPG  VAIHI +++ +DY+  GRKV+Y
Sbjct  447  DAVYVPPGANVAIHITRQLAVDYEDHGRKVRY  478

54) J451_13825 in NC_021739


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  259 bits (969),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 182/452 (41%), Positives = 297/452 (66%), Gaps = 38/452 (8%)

Query  44   SIKDLTPEQVRSMGIQGDTPIDTLRTLVTT---VKSNERRMDE----LIDENRQLKQKED  96
            ++ +L+ ++++++GI+GDT+ DTLRTL+ +   V++ +  +DE    LI EN +LK  + 
Sbjct  44   ALTELSQDDLKALGIEGDTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENS  103

Query  97   LVNGRISDAVNNETRKLQEQIADLKMQLFDMATHVNNKSTAQESTPQAEAQPSMTTNKGF  156
             V  +IS+AVN   +  +E +   K  L++   ++     +Q    +     + ++  +F
Sbjct  104  SVGLQISNAVNAAKQETNEALEKQKTFLLEKLNDLTGTLKSQGQNTDM-VSTGSSSGTDF  162

Query  157  GTAGDKLPIGGASMPNVDIGGMYWVEPSDQIGLDAGGKAVSGNTLATKFGFPNDFKGGQT  216
              +   L ++  + ++   G + W+ P D  +  + G++ S+N    KF FP  F +++ 
Sbjct  163  PVG---LGLDPENASSATQGEVIWISPQD--AKKTEGQSQSDND---KFTFPTSFLDDNP  214

Query  217  TGNTEKKGLPFFPETDVVTGSQGTTGNSRGKNQITPVYTVPSNSTFLDSVAMTGLIGRIP  276
             +   ++   +     VV   Q   GN+ + ++  PVYT+P NST+++S AMT+LIGRIP
Sbjct  215  VS---RQRAEY---DRVVKNKQELDGNG-AESDTRPVYTLPENSTLVGSKAMTALIGRIP  267

Query  277  IDNKVSDAYPFKVLIGRENLIANGIELLDVEGAIVSGTATGDWTLSCVRGDVKSMTFVFN  336
            I++KV+D+YPFKVL G++NL ANGIEL DVEGAIVSGTATGD  LSCVRG + S+TFVF+
Sbjct  268  INDKVTDPYPFKVLNGKDNLTANGIELPDVEGAIVSGTATGDMVLSCVRGTIHSITFVFS  327

Query  337  DGRI------VSTT------NKGNSENIGWLSDSSGIPCVPGERKTNAPEYLGTNfflaa  384
            DGRI      V+ T      N G+  +IGW+SD++GIPC++GERK+NA+ YL T  +L+ 
Sbjct  328  DGRIRTLPRPVANTQGNNNDNAGDRGSIGWISDNNGIPCISGERKSNASTYLPTVALLGM  387

Query  385  asaaaqgfsqs--qtttVVDGNSVVGAVTGDQGKFILGQAIGGGLKESADWFRKRFAENF  442
            +S+A+++++Q+   T   V+G +V +A+TG+ G+ +LGQ++GGG+KE +DW ++R+++ F
Sbjct  388  GSSAGDALTQNQYTTQNNVNG-GVTSALTGNAGQAVLGQTLGGGFKEVTDWVKQRYGQTF  446

Query  443  DAVYVPPGHRVAIHIEKEIEIDYNSKGRKVKY  474
            DAVYVPPG  VAIHI +++ +DY+  GRKV+Y
Sbjct  447  DAVYVPPGANVAIHITRQLAVDYEDHGRKVRY  478

55) D650_16470 in NC_020833


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  259 bits (969),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 182/452 (41%), Positives = 297/452 (66%), Gaps = 38/452 (8%)

Query  44   SIKDLTPEQVRSMGIQGDTPIDTLRTLVTT---VKSNERRMDE----LIDENRQLKQKED  96
            ++ +L+ ++++++GI+GDT+ DTLRTL+ +   V++ +  +DE    LI EN +LK  + 
Sbjct  44   ALTELSQDDLKALGIEGDTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENS  103

Query  97   LVNGRISDAVNNETRKLQEQIADLKMQLFDMATHVNNKSTAQESTPQAEAQPSMTTNKGF  156
             V  +IS+AVN   +  +E +   K  L++   ++     +Q    +     + ++  +F
Sbjct  104  SVGLQISNAVNAAKQETNEALEKQKTFLLEKLNDLTGTLKSQGQNTDM-VSTGSSSGTDF  162

Query  157  GTAGDKLPIGGASMPNVDIGGMYWVEPSDQIGLDAGGKAVSGNTLATKFGFPNDFKGGQT  216
              +   L ++  + ++   G + W+ P D  +  + G++ S+N    KF FP  F +++ 
Sbjct  163  PVG---LGLDPENASSATQGEVIWISPQD--AKKTEGQSQSDND---KFTFPTSFLDDNP  214

Query  217  TGNTEKKGLPFFPETDVVTGSQGTTGNSRGKNQITPVYTVPSNSTFLDSVAMTGLIGRIP  276
             +   ++   +     VV   Q   GN+ + ++  PVYT+P NST+++S AMT+LIGRIP
Sbjct  215  VS---RQRAEY---DRVVKNKQELDGNG-AESDTRPVYTLPENSTLVGSKAMTALIGRIP  267

Query  277  IDNKVSDAYPFKVLIGRENLIANGIELLDVEGAIVSGTATGDWTLSCVRGDVKSMTFVFN  336
            I++KV+D+YPFKVL G++NL ANGIEL DVEGAIVSGTATGD  LSCVRG + S+TFVF+
Sbjct  268  INDKVTDPYPFKVLNGKDNLTANGIELPDVEGAIVSGTATGDMVLSCVRGTIHSITFVFS  327

Query  337  DGRI------VSTT------NKGNSENIGWLSDSSGIPCVPGERKTNAPEYLGTNfflaa  384
            DGRI      V+ T      N G+  +IGW+SD++GIPC++GERK+NA+ YL T  +L+ 
Sbjct  328  DGRIRTLPRPVANTQGNNNDNAGDRGSIGWISDNNGIPCISGERKSNASTYLPTVALLGM  387

Query  385  asaaaqgfsqs--qtttVVDGNSVVGAVTGDQGKFILGQAIGGGLKESADWFRKRFAENF  442
            +S+A+++++Q+   T   V+G +V +A+TG+ G+ +LGQ++GGG+KE +DW ++R+++ F
Sbjct  388  GSSAGDALTQNQYTTQNNVNG-GVTSALTGNAGQAVLGQTLGGGFKEVTDWVKQRYGQTF  446

Query  443  DAVYVPPGHRVAIHIEKEIEIDYNSKGRKVKY  474
            DAVYVPPG  VAIHI +++ +DY+  GRKV+Y
Sbjct  447  DAVYVPPGANVAIHITRQLAVDYEDHGRKVRY  478

56) N220_08290 in NC_021883


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  259 bits (969),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 182/452 (41%), Positives = 297/452 (66%), Gaps = 38/452 (8%)

Query  44   SIKDLTPEQVRSMGIQGDTPIDTLRTLVTT---VKSNERRMDE----LIDENRQLKQKED  96
            ++ +L+ ++++++GI+GDT+ DTLRTL+ +   V++ +  +DE    LI EN +LK  + 
Sbjct  44   ALTELSQDDLKALGIEGDTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENS  103

Query  97   LVNGRISDAVNNETRKLQEQIADLKMQLFDMATHVNNKSTAQESTPQAEAQPSMTTNKGF  156
             V  +IS+AVN   +  +E +   K  L++   ++     +Q    +     + ++  +F
Sbjct  104  SVGLQISNAVNAAKQETNEALEKQKTFLLEKLNDLTGTLKSQGQNTDM-VSTGSSSGTDF  162

Query  157  GTAGDKLPIGGASMPNVDIGGMYWVEPSDQIGLDAGGKAVSGNTLATKFGFPNDFKGGQT  216
              +   L ++  + ++   G + W+ P D  +  + G++ S+N    KF FP  F +++ 
Sbjct  163  PVG---LGLDPENASSATQGEVIWISPQD--AKKTEGQSQSDND---KFTFPTSFLDDNP  214

Query  217  TGNTEKKGLPFFPETDVVTGSQGTTGNSRGKNQITPVYTVPSNSTFLDSVAMTGLIGRIP  276
             +   ++   +     VV   Q   GN+ + ++  PVYT+P NST+++S AMT+LIGRIP
Sbjct  215  VS---RQRAEY---DRVVKNKQELDGNG-AESDTRPVYTLPENSTLVGSKAMTALIGRIP  267

Query  277  IDNKVSDAYPFKVLIGRENLIANGIELLDVEGAIVSGTATGDWTLSCVRGDVKSMTFVFN  336
            I++KV+D+YPFKVL G++NL ANGIEL DVEGAIVSGTATGD  LSCVRG + S+TFVF+
Sbjct  268  INDKVTDPYPFKVLNGKDNLTANGIELPDVEGAIVSGTATGDMVLSCVRGTIHSITFVFS  327

Query  337  DGRI------VSTT------NKGNSENIGWLSDSSGIPCVPGERKTNAPEYLGTNfflaa  384
            DGRI      V+ T      N G+  +IGW+SD++GIPC++GERK+NA+ YL T  +L+ 
Sbjct  328  DGRIRTLPRPVANTQGNNNDNAGDRGSIGWISDNNGIPCISGERKSNASTYLPTVALLGM  387

Query  385  asaaaqgfsqs--qtttVVDGNSVVGAVTGDQGKFILGQAIGGGLKESADWFRKRFAENF  442
            +S+A+++++Q+   T   V+G +V +A+TG+ G+ +LGQ++GGG+KE +DW ++R+++ F
Sbjct  388  GSSAGDALTQNQYTTQNNVNG-GVTSALTGNAGQAVLGQTLGGGFKEVTDWVKQRYGQTF  446

Query  443  DAVYVPPGHRVAIHIEKEIEIDYNSKGRKVKY  474
            DAVYVPPG  VAIHI +++ +DY+  GRKV+Y
Sbjct  447  DAVYVPPGANVAIHITRQLAVDYEDHGRKVRY  478

57) PFLU1929 in NC_012660


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  251 bits (936),  Expect = 1e-67, Method: Compositional matrix adjust.
 Identities = 187/467 (41%), Positives = 315/467 (68%), Gaps = 23/467 (4%)

Query  32   TPSPEHPVDQGNL-QLSAEQAKSLGIAGDTPRDTVATLVGQVKAMRSDMLGLKKHNDSLL  90
            T  PE +     L +LS ++ K+LGI GDT+ DT+ TL+G ++ +R+    L  +N +L+
Sbjct  33   TTEPEPAKTTNALTELSQDDLKALGIEGDTSADTLRTLIGALRDVRARQAVLDEQNKALI  92

Query  91   TENNRLRERENSVDSRIQTALGSVTQQVDEGRRQANEARLKAEQDSRQARglltqlqgql  150
            +ENN+L+  ++SV+ +I  A+ +  Q+ +E+  + +   L   +D   +     Q  + +
Sbjct  93   SENNKLKGENSSVGLQISNAVNAAKQETNEALEKQKTFLLEKLNDLTGTLKSQGQNTDMV  152

Query  151  sgltgkgkDMPIGLGLEPGDGAQFDGQHSANDALQWIEPSDAPPTNARGKTKISSALSLP  210
            S  ++ G D P+GLGL+P +++      ++++ + WI P DA  T++++++  +  +++P
Sbjct  153  STGSSSGTDFPVGLGLDPENASS-----ATQGEVIWISPQDAKKTEGQSQSD-NDKFTFP  206

Query  211  TAFNSLEGLNDNANDRSQKPLGAVTNNKRDLAQSVDRAEGARPVYTIPENATLMGSVAMT  270
            T+F     L+DN+  R +   + V +NK++L  +   ++ +RPVYT+PEN+TL+GS AMT
Sbjct  207  TSF-----LDDNPVSRQRAEYDRVVKNKQELDGNGAESD-TRPVYTLPENSTLVGSKAMT  260

Query  271  ALIGRVPVDGTVNDPYPFKVLVGPENLTANGIDLPDVAGAVMSGTASGDWTLSCVRGQVE  330
            ALIGR+P+++ V DPYPFKVL G +NLTANGI+LPDV GA++SGTA+GD  LSCVRG ++
Sbjct  261  ALIGRIPINDKVTDPYPFKVLNGKDNLTANGIELPDVEGAIVSGTATGDMVLSCVRGTIH  320

Query  331  SITFVFTDGTIRTVPQPKAVASRTASTTQSSNTDKI--RGGLGYLSDPYGIPCIAGGRRS  388
            SITFVF+DG IRT+P+P        + TQ++N D+   RG++G +SD  GIPCI+G R+S
Sbjct  321  SITFVFSDGRIRTLPRP-------VANTQGNNNDNAGDRGSIGWISDNNGIPCISGERKS  373

Query  389  NAQQYLGSQSLITaagagvaallgNERNNSSVINAggttlgvtsstgNNALSSILSGGVS  448
            NA  YL + +L+  ++++  AL  N+    + +N+ G T ++T+++G+  L+  L+GG  
Sbjct  374  NASTYLPTVALLGMGSSAGDALTQNQYTTQNNVNG-GVTSALTGNAGQAVLGQTLGGGFK  432

Query  449  DVREWVNKLYGEafaavyvppaaqvaLHLDHEITIDYEPKGRSVRHE  495
            +V +WV++ YG++F AVYVPP+A+VA+H+ +++++DYE  GR VR +
Sbjct  433  EVTDWVKQRYGQTFDAVYVPPGANVAIHITRQLAVDYEDHGRKVRYD  479

58) HS_1762 in NC_008309


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  237 bits (884),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 186/448 (42%), Positives = 291/448 (65%), Gaps = 38/448 (8%)

Query  42   TALKDLTPEEIRQLGLEGDTKNDTVRTLIGAAKESHRRYEKVISQNEKIL-KENETLRKR  100
             AL +L+ ++++ LG+EGDT  DT+RTLIGA ++ + R + V+ +++K L  EN+ L+  
Sbjct  43   NALTELSQDDLKALGIEGDTSADTLRTLIGALRDVRAR-QAVLDEQNKALISENNKLKGE  101

Query  101  EqdvhqqvddavqSKTRE----LQNMVAILREEMLQLVEGRSQSNGPTAYQGNTANGIGV  156
            +  V  Q+ +AV++  +E    L++  ++L E + +L  G  +S+G  +   +T+++ G 
Sbjct  102  NSSVGLQISNAVNAAKQETNEALEKQKTFLLEKLNDLT-GTLKSQGQNTDMVSTGSSSGT  160

Query  157  EEDTTLPIGNGQVGMRTEGTVQHVEWVNPDD----QIEDERDPAKIGFPNLHAFNTASGK  212
            +    L ++  + +  T+G   +V W++P+D    + + + D  K+ FP   +F   +  
Sbjct  161  DFPVGLGLDPENASSATQG---EVIWISPQDAKKTEGQSQSDNDKFTFPT--SFLDDN--  213

Query  213  KGLPFISGNDENDRDITssgs--ssekqkskIAVYTIPENSTLMGSTSMTALLGRIPIGN  270
               P      E DR + +     ++  +    +VYT+PENSTL+GS +MTAL+GRIPI +
Sbjct  214  ---PVSRQRAEYDRVVKNKQELDGNGAESDTRPVYTLPENSTLVGSKAMTALIGRIPIND  270

Query  271  AVNDPYPFKAIIGRDNLIANGIELPDIEQAIVSGTATGDWTLSCVRGEVKSLTFVFNDGR  330
             V DPYPFK + G+DNL ANGIELPD+E AIVSGTATGD  LSCVRG + S+TFVF+DGR
Sbjct  271  KVTDPYPFKVLNGKDNLTANGIELPDVEGAIVSGTATGDMVLSCVRGTIHSITFVFSDGR  330

Query  331  I------VTSGKGNEK--------IGWLSDPHGIPCIPGERKTNAPEYLGTHFLLaaaga  376
            I      V++ +GN++        IGW+SD +GIPCI+GERK+NA+ YL T  LL+ +++
Sbjct  331  IRTLPRPVANTQGNNNDNAGDRGSIGWISDNNGIPCISGERKSNASTYLPTVALLGMGSS  390

Query  377  aaqgysqaq-tttavngntvvgavtgqqgKYVVGQALGQGIQESANWFKERYGQNFDAIY  435
            A+++ +Q Q TT       V +A+TG+ G+ V+GQ+LG G++E ++W K+RYGQ FDA+Y
Sbjct  391  AGDALTQNQYTTQNNVNGGVTSALTGNAGQAVLGQTLGGGFKEVTDWVKQRYGQTFDAVY  450

Query  436  VPPGHPVAIHIDKAIDIDYDLKGRKVKY  463
            VPPG  VAIHI + + +DY+  GRKV+Y
Sbjct  451  VPPGANVAIHITRQLAVDYEDHGRKVRY  478

59) HELO_4058 in NC_014532


> NC_003198_P9|47|G40|16763038|NP_458655.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|38501..39979|STY4570|-|putative 
exported protein
Length=492

 Score =  230 bits (857),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 190/455 (42%), Positives = 295/455 (65%), Gaps = 23/455 (5%)

Query  50   LTDEEKTALGIEADTPRDTVATLVGQLRQTNAEMQQMREESAQLREQNERLAERARNVDQ  109
            L++++  ALGIE+DT+ DT+ TL+G LR+  A    + E++  L  +N++L     +V+ 
Sbjct  48   LSQDDLKALGIEGDTSADTLRTLIGALRDVRARQAVLDEQNKALISENNKLKGENSSVGL  107

Query  110  QVaaamreererHRsqlnqqsn----eqqsVLGTLKRQINQLQGQLDTSGSEDDVPVglg  165
            Q++ A+   ++     L++Q        + + GTLK Q ++ +     S+S  D PVGLG
Sbjct  108  QISNAVNAAKQETNEALEKQKTFLLEKLNDLTGTLKSQGQNTDMVSTGSSSGTDFPVGLG  167

Query  166  -legggagtsggqlAWVEPLDAAPTDSRGRRSNDEGPVFPTSFGEASDAVSDSat-raat  223
                 +++++ G++ W+ P DA  T+++++ S+++   FPTSF + +    + A      
Sbjct  168  LDPENASSATQGEVIWISPQDAKKTEGQSQ-SDNDKFTFPTSFLDDNPVSRQRAEYDRVV  226

Query  224  aieakatGEPDASTVEPVYTVPENSTLMGSLGMTALIGRVPINGTVNDPYPFKAVIGQDN  283
                   G+   S   PVYT+PENSTL+GS +MTALIGR+PIN+ V DPYPFK + G+DN
Sbjct  227  KNKQELDGNGAESDTRPVYTLPENSTLVGSKAMTALIGRIPINDKVTDPYPFKVLNGKDN  286

Query  284  LTANGIEIPELEAAVVSGTATGDWTLSCVRGNIDSMTFVFQDGTIRTVPTPEDVNsgggg  343
            LTANGIE+P++E+A+VSGTATGD  LSCVRG I+S+TFVF DG IRT+P P        +
Sbjct  287  LTANGIELPDVEGAIVSGTATGDMVLSCVRGTIHSITFVFSDGRIRTLPRP-------VA  339

Query  344  ssrqsgdttigggdsigwisdAYGTPCVTGERRSNAQEYLGTQSLLTAAGAGVAstlsdd  403
            +++ + +   G+ +SIGWISD  G PC++GER+SNA  YL T +LL   G G ++  +  
Sbjct  340  NTQGNNNDNAGDRGSIGWISDNNGIPCISGERKSNASTYLPTVALL---GMGSSAGDALT  396

Query  404  dstsfttMGPDGSVTQAMSGNQA---VGQILTQGVNDMSNWVNQLYGQAFAAVYVPPGQE  460
            ++   T    +G+VT A++GN +   +GQ L  G +++++WV+Q YGQ+F AVYVPPG +
Sbjct  397  QNQYTTQNNVNGGVTSALTGNAGQAVLGQTLGGGFKEVTDWVKQRYGQTFDAVYVPPGAN  456

Query  461  VAIHITKQLPIDFETEGRKVHYGHSQAPT---YAL  492
            VAIHIT+QL++D+E +GRKV+Y+ S + T   Y+L
Sbjct  457  VAIHITRQLAVDYEDHGRKVRYDFSLPGTGGHYGL  491