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Homologs of cesD gene of JQ747523

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) cesD
( YP_003232145.1 )

T3SS chaperone CesD

NC_013361
(Escherichia coli 11368)

7e-52

2) cesD
( YP_003223483.1 )

chaperone CesD

NC_013353
(Escherichia coli 12009)

7e-52

3) cesD
( YP_003236096.1 )

chaperone CesD

NC_013364
(Escherichia coli 11128)

8e-52

4) cesD
( YP_003501882.1 )

type III secretion low calcium response chaperone LcrH/SycD

NC_013941
(Escherichia coli CB9615)

8e-52

5) cesD
( YP_002331418.1 )

chaperone CesD

NC_011601
(Escherichia coli E2348/69)

8e-52

6) cesD
( NP_290276.1 )

hypothetical protein

NC_002655
(Escherichia coli EDL933)

8e-52

7) ECO55CA74_21255
( YP_006161356.1 )

type III secretion low calcium response chaperone LcrH/SycD

NC_017656
(Escherichia coli RM12579)

8e-52

8) ECs4576
( NP_312603.1 )

CesD

NC_002695
(Escherichia coli Sakai)

8e-52

9) cesD
( YP_003080488.1 )

LEE-encoded type III secretion system factor

NC_013008
(Escherichia coli TW14359)

8e-52

10) CDCO157_4311
( YP_006315176.1 )

protein CesD

NC_017906
(Escherichia coli Xuzhou21)

8e-52

11) cesD
( YP_003366510.1 )

T3SS chaperone CesD

NC_013716
(Citrobacter rodentium ICC168)

2e-51

12) cesD
( NP_902248.1 )

type III secretion system CesD protein

NC_005085
(Chromobacterium violaceum ATCC 12472)

5e-27

13) NT01EI_0951
( YP_002932399.1 )

type III secretion low calcium response chaperone LcrH/SycD, putative

NC_012779
(Edwardsiella ictaluri 93-146)

7e-19

• Sequence Alignments

1) cesD in NC_013353


> JQ747523|47|G43|397781931|AFO66326.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1296|-|39459..39911|cesD|SESS1296_03640|putative 
LEE-encoded type III secretion system chaperone
Length=150

 Score =  196 bits (727),  Expect = 7e-52, Method: Compositional matrix adjust.
 Identities = 118/150 (79%), Positives = 142/150 (95%), Gaps = 0/150 (0%)

Query  1    MSRKFSSLQDIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY  60
            M +KF+SLQDIYD+Y++GGTLASLTNLTQ+DL+DL++YAYT YQSGD+I+ARN++HLL+Y
Sbjct  1    MKKKFNSLQDIYDYYNNGGTLASLTNLTQRDLDDLQAYAYTCYQSGDIISARNIYHLLAY  60

Query  61   LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNRKMAK  120
            LEHWNYDYTLSLGLCHQRLSNHE+AQLCFARCATLVMQDPRASYYSGISY++ G++KMAK
Sbjct  61   LEHWNYDYTLSLGLCHQRLSNHEEAQLCFARCATLVMQDPRASYYSGISYIVTGDKKMAK  120

Query  121  KAFKACLMWCNEQEKYATYKENIKKLLGNT  150
            KAFKACLMWCN +E Y+ Y ENIKK+L++ 
Sbjct  121  KAFKACLMWCNGNEDYSMYEENIKKILAQN  150

2) cesD in NC_013361


> JQ747523|47|G43|397781931|AFO66326.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1296|-|39459..39911|cesD|SESS1296_03640|putative 
LEE-encoded type III secretion system chaperone
Length=150

 Score =  196 bits (727),  Expect = 7e-52, Method: Compositional matrix adjust.
 Identities = 118/150 (79%), Positives = 142/150 (95%), Gaps = 0/150 (0%)

Query  1    MSRKFSSLQDIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY  60
            M +KF+SLQDIYD+Y++GGTLASLTNLTQ+DL+DL++YAYT YQSGD+I+ARN++HLL+Y
Sbjct  1    MKKKFNSLQDIYDYYNNGGTLASLTNLTQRDLDDLQAYAYTCYQSGDIISARNIYHLLAY  60

Query  61   LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNRKMAK  120
            LEHWNYDYTLSLGLCHQRLSNHE+AQLCFARCATLVMQDPRASYYSGISY++ G++KMAK
Sbjct  61   LEHWNYDYTLSLGLCHQRLSNHEEAQLCFARCATLVMQDPRASYYSGISYIVTGDKKMAK  120

Query  121  KAFKACLMWCNEQEKYATYKENIKKLLGNT  150
            KAFKACLMWCN +E Y+ Y ENIKK+L++ 
Sbjct  121  KAFKACLMWCNGNEDYSMYEENIKKILAQN  150

3) cesD in NC_013364


> JQ747523|47|G43|397781931|AFO66326.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1296|-|39459..39911|cesD|SESS1296_03640|putative 
LEE-encoded type III secretion system chaperone
Length=150

 Score =  196 bits (726),  Expect = 8e-52, Method: Compositional matrix adjust.
 Identities = 118/150 (79%), Positives = 142/150 (95%), Gaps = 0/150 (0%)

Query  1    MSRKFSSLEDIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY  60
            M +KF+SL+DIYD+Y++GGTLASLTNLTQ+DL+DL++YAYT YQSGD+I+ARN++HLL+Y
Sbjct  1    MKKKFNSLQDIYDYYNNGGTLASLTNLTQRDLDDLQAYAYTCYQSGDIISARNIYHLLAY  60

Query  61   LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNKKMAK  120
            LEHWNYDYTLSLGLCHQRLSNHE+AQLCFARCATLVMQDPRASYYSGISY++ G+KKMAK
Sbjct  61   LEHWNYDYTLSLGLCHQRLSNHEEAQLCFARCATLVMQDPRASYYSGISYIVTGDKKMAK  120

Query  121  KAFKACLMWCNEKEKYTTYKENIKKLLGNT  150
            KAFKACLMWCN +E Y+ Y ENIKK+L++ 
Sbjct  121  KAFKACLMWCNGNEDYSMYEENIKKILAQN  150

4) cesD in NC_011601


> JQ747523|47|G43|397781931|AFO66326.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1296|-|39459..39911|cesD|SESS1296_03640|putative 
LEE-encoded type III secretion system chaperone
Length=150

 Score =  196 bits (726),  Expect = 8e-52, Method: Compositional matrix adjust.
 Identities = 118/150 (79%), Positives = 142/150 (95%), Gaps = 0/150 (0%)

Query  1    MSRKFSSLEDIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY  60
            M +KF+SL+DIYD+Y++GGTLASLTNLTQ+DL+DL++YAYT YQSGD+I+ARN++HLL+Y
Sbjct  1    MKKKFNSLQDIYDYYNNGGTLASLTNLTQRDLDDLQAYAYTCYQSGDIISARNIYHLLAY  60

Query  61   LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNKKMAK  120
            LEHWNYDYTLSLGLCHQRLSNHE+AQLCFARCATLVMQDPRASYYSGISY++ G+KKMAK
Sbjct  61   LEHWNYDYTLSLGLCHQRLSNHEEAQLCFARCATLVMQDPRASYYSGISYIVTGDKKMAK  120

Query  121  KAFKACLMWCNEKEKYTTYKENIKKLLGNT  150
            KAFKACLMWCN +E Y+ Y ENIKK+L++ 
Sbjct  121  KAFKACLMWCNGNEDYSMYEENIKKILAQN  150

5) cesD in NC_002655


> JQ747523|47|G43|397781931|AFO66326.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1296|-|39459..39911|cesD|SESS1296_03640|putative 
LEE-encoded type III secretion system chaperone
Length=150

 Score =  196 bits (726),  Expect = 8e-52, Method: Compositional matrix adjust.
 Identities = 118/150 (79%), Positives = 142/150 (95%), Gaps = 0/150 (0%)

Query  1    MSRKFSSLEDIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY  60
            M +KF+SL+DIYD+Y++GGTLASLTNLTQ+DL+DL++YAYT YQSGD+I+ARN++HLL+Y
Sbjct  1    MKKKFNSLQDIYDYYNNGGTLASLTNLTQRDLDDLQAYAYTCYQSGDIISARNIYHLLAY  60

Query  61   LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNKKMAK  120
            LEHWNYDYTLSLGLCHQRLSNHE+AQLCFARCATLVMQDPRASYYSGISY++ G+KKMAK
Sbjct  61   LEHWNYDYTLSLGLCHQRLSNHEEAQLCFARCATLVMQDPRASYYSGISYIVTGDKKMAK  120

Query  121  KAFKACLMWCNEKEKYTTYKENIKKLLGNT  150
            KAFKACLMWCN +E Y+ Y ENIKK+L++ 
Sbjct  121  KAFKACLMWCNGNEDYSMYEENIKKILAQN  150

6) ECs4576 in NC_002695


> JQ747523|47|G43|397781931|AFO66326.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1296|-|39459..39911|cesD|SESS1296_03640|putative 
LEE-encoded type III secretion system chaperone
Length=150

 Score =  196 bits (726),  Expect = 8e-52, Method: Compositional matrix adjust.
 Identities = 118/150 (79%), Positives = 142/150 (95%), Gaps = 0/150 (0%)

Query  1    MSRKFSSLEDIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY  60
            M +KF+SL+DIYD+Y++GGTLASLTNLTQ+DL+DL++YAYT YQSGD+I+ARN++HLL+Y
Sbjct  1    MKKKFNSLQDIYDYYNNGGTLASLTNLTQRDLDDLQAYAYTCYQSGDIISARNIYHLLAY  60

Query  61   LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNKKMAK  120
            LEHWNYDYTLSLGLCHQRLSNHE+AQLCFARCATLVMQDPRASYYSGISY++ G+KKMAK
Sbjct  61   LEHWNYDYTLSLGLCHQRLSNHEEAQLCFARCATLVMQDPRASYYSGISYIVTGDKKMAK  120

Query  121  KAFKACLMWCNEKEKYTTYKENIKKLLGNT  150
            KAFKACLMWCN +E Y+ Y ENIKK+L++ 
Sbjct  121  KAFKACLMWCNGNEDYSMYEENIKKILAQN  150

7) cesD in NC_013008


> JQ747523|47|G43|397781931|AFO66326.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1296|-|39459..39911|cesD|SESS1296_03640|putative 
LEE-encoded type III secretion system chaperone
Length=150

 Score =  196 bits (726),  Expect = 8e-52, Method: Compositional matrix adjust.
 Identities = 118/150 (79%), Positives = 142/150 (95%), Gaps = 0/150 (0%)

Query  1    MSRKFSSLEDIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY  60
            M +KF+SL+DIYD+Y++GGTLASLTNLTQ+DL+DL++YAYT YQSGD+I+ARN++HLL+Y
Sbjct  1    MKKKFNSLQDIYDYYNNGGTLASLTNLTQRDLDDLQAYAYTCYQSGDIISARNIYHLLAY  60

Query  61   LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNKKMAK  120
            LEHWNYDYTLSLGLCHQRLSNHE+AQLCFARCATLVMQDPRASYYSGISY++ G+KKMAK
Sbjct  61   LEHWNYDYTLSLGLCHQRLSNHEEAQLCFARCATLVMQDPRASYYSGISYIVTGDKKMAK  120

Query  121  KAFKACLMWCNEKEKYTTYKENIKKLLGNT  150
            KAFKACLMWCN +E Y+ Y ENIKK+L++ 
Sbjct  121  KAFKACLMWCNGNEDYSMYEENIKKILAQN  150

8) cesD in NC_013941


> JQ747523|47|G43|397781931|AFO66326.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1296|-|39459..39911|cesD|SESS1296_03640|putative 
LEE-encoded type III secretion system chaperone
Length=150

 Score =  196 bits (726),  Expect = 8e-52, Method: Compositional matrix adjust.
 Identities = 118/150 (79%), Positives = 142/150 (95%), Gaps = 0/150 (0%)

Query  1    MSRKFSSLEDIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY  60
            M +KF+SL+DIYD+Y++GGTLASLTNLTQ+DL+DL++YAYT YQSGD+I+ARN++HLL+Y
Sbjct  1    MKKKFNSLQDIYDYYNNGGTLASLTNLTQRDLDDLQAYAYTCYQSGDIISARNIYHLLAY  60

Query  61   LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNKKMAK  120
            LEHWNYDYTLSLGLCHQRLSNHE+AQLCFARCATLVMQDPRASYYSGISY++ G+KKMAK
Sbjct  61   LEHWNYDYTLSLGLCHQRLSNHEEAQLCFARCATLVMQDPRASYYSGISYIVTGDKKMAK  120

Query  121  KAFKACLMWCNEKEKYTTYKENIKKLLGNT  150
            KAFKACLMWCN +E Y+ Y ENIKK+L++ 
Sbjct  121  KAFKACLMWCNGNEDYSMYEENIKKILAQN  150

9) ECO55CA74_21255 in NC_017656


> JQ747523|47|G43|397781931|AFO66326.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1296|-|39459..39911|cesD|SESS1296_03640|putative 
LEE-encoded type III secretion system chaperone
Length=150

 Score =  196 bits (726),  Expect = 8e-52, Method: Compositional matrix adjust.
 Identities = 118/150 (79%), Positives = 142/150 (95%), Gaps = 0/150 (0%)

Query  1    MSRKFSSLEDIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY  60
            M +KF+SL+DIYD+Y++GGTLASLTNLTQ+DL+DL++YAYT YQSGD+I+ARN++HLL+Y
Sbjct  1    MKKKFNSLQDIYDYYNNGGTLASLTNLTQRDLDDLQAYAYTCYQSGDIISARNIYHLLAY  60

Query  61   LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNKKMAK  120
            LEHWNYDYTLSLGLCHQRLSNHE+AQLCFARCATLVMQDPRASYYSGISY++ G+KKMAK
Sbjct  61   LEHWNYDYTLSLGLCHQRLSNHEEAQLCFARCATLVMQDPRASYYSGISYIVTGDKKMAK  120

Query  121  KAFKACLMWCNEKEKYTTYKENIKKLLGNT  150
            KAFKACLMWCN +E Y+ Y ENIKK+L++ 
Sbjct  121  KAFKACLMWCNGNEDYSMYEENIKKILAQN  150

10) CDCO157_4311 in NC_017906


> JQ747523|47|G43|397781931|AFO66326.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1296|-|39459..39911|cesD|SESS1296_03640|putative 
LEE-encoded type III secretion system chaperone
Length=150

 Score =  196 bits (726),  Expect = 8e-52, Method: Compositional matrix adjust.
 Identities = 118/150 (79%), Positives = 142/150 (95%), Gaps = 0/150 (0%)

Query  1    MSRKFSSLEDIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTY  60
            M +KF+SL+DIYD+Y++GGTLASLTNLTQ+DL+DL++YAYT YQSGD+I+ARN++HLL+Y
Sbjct  1    MKKKFNSLQDIYDYYNNGGTLASLTNLTQRDLDDLQAYAYTCYQSGDIISARNIYHLLAY  60

Query  61   LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNKKMAK  120
            LEHWNYDYTLSLGLCHQRLSNHE+AQLCFARCATLVMQDPRASYYSGISY++ G+KKMAK
Sbjct  61   LEHWNYDYTLSLGLCHQRLSNHEEAQLCFARCATLVMQDPRASYYSGISYIVTGDKKMAK  120

Query  121  KAFKACLMWCNEKEKYTTYKENIKKLLGNT  150
            KAFKACLMWCN +E Y+ Y ENIKK+L++ 
Sbjct  121  KAFKACLMWCNGNEDYSMYEENIKKILAQN  150

11) cesD in NC_013716


> JQ747523|47|G43|397781931|AFO66326.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1296|-|39459..39911|cesD|SESS1296_03640|putative 
LEE-encoded type III secretion system chaperone
Length=150

 Score =  194 bits (721),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 119/150 (80%), Positives = 140/150 (94%), Gaps = 0/150 (0%)

Query  1    MSTKFSSLEEIYDFYQNGGTLASLTNLTQQDLNDLHSYAYTVYQSGDIITARNLFHLLTY  60
            M  KF+SL++IYD+Y+NGGTLASLTNLTQ+DL+DL++YAYT YQSGDII+ARN++HLL+Y
Sbjct  1    MKKKFNSLQDIYDYYNNGGTLASLTNLTQRDLDDLQAYAYTCYQSGDIISARNIYHLLAY  60

Query  61   LEHWNYDYTLSLGLCHQRLSNHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNRKMAK  120
            LEHWNYDYTLSLGLCHQRLSNHE+AQLCFARCATLVMQDPRASYYSGISY++ G++KMAK
Sbjct  61   LEHWNYDYTLSLGLCHQRLSNHEEAQLCFARCATLVMQDPRASYYSGISYIVTGDKKMAK  120

Query  121  KAFKACLMWCNEQEKYSTYKENIKKLLDNT  150
            KAFKACLMWCN +E YS Y ENIKK+L + 
Sbjct  121  KAFKACLMWCNGNEDYSMYEENIKKILAQN  150

12) cesD in NC_005085


> JQ747523|47|G43|397781931|AFO66326.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1296|-|39459..39911|cesD|SESS1296_03640|putative 
LEE-encoded type III secretion system chaperone
Length=150

 Score =  113 bits (413),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 61/141 (44%), Positives = 102/141 (73%), Gaps = 1/141 (0%)

Query  13   DELYRHFFSRGGSLRLLADIQGEDLESLYGYAKQLFDGGEIAAARNVYQLLSTLDHWNFD  72
            +++Y ++++ GG+L  L+++   DL+ L +YA   +++G+I +ARN+Y+LL+ L+HWN+D
Sbjct  9    QDIY-DYYNNGGTLASLTNLTQRDLDDLQAYAYTCYQSGDIISARNIYHLLAYLEHWNYD  67

Query  73   YLLALGLCHQRLGAHNEAVVCFGRAGLIKVDDPRAAFYAGISYRLDGNAEYASKAFKAAI  132
            Y L+LGLCHQRL+ H+EA +CF+R + + ++DPRA++Y+GISY + G+   A KAFKA +
Sbjct  68   YTLSLGLCHQRLSNHEEAQLCFARCATLVMQDPRASYYSGISYIVTGDKKMAKKAFKACL  127

Query  133  NWCGEQIDYQAIKASAVDMLA  153
             WC  + DY     +   +LA
Sbjct  128  MWCNGNEDYSMYEENIKKILA  148

13) NT01EI_0951 in NC_012779


> JQ747523|47|G43|397781931|AFO66326.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1296|-|39459..39911|cesD|SESS1296_03640|putative 
LEE-encoded type III secretion system chaperone
Length=150

 Score = 86.8 bits (310),  Expect = 7e-19, Method: Compositional matrix adjust.
 Identities = 45/112 (41%), Positives = 80/112 (72%), Gaps = 4/112 (3%)

Query  5    DDLATLHGFFNQGGTLQALMDIAPDDLD--HVYSYACQLFDAEDYGGAKRFYLLLTRLSH  62
            + L  + +++N+GGTL +L +++  DLD  + Y+Y+C  +++ D  +A+ +Y LL+ L H
Sbjct  6    NSLQDIYDYYNNGGTLASLTNLTQRDLDDLQAYAYTC--YQSGDIISARNIYHLLAYLEH  63

Query  63   WQYEYWLSLGLCCQRLEEHEQAVSCFGQAGLLRLDDPQPAYLAGLSYRQIGQ  114
            W+Y+Y LSLGLC QRL +HE+A  CF++ + L ++DP+++Y +G+SY   G+
Sbjct  64   WNYDYTLSLGLCHQRLSNHEEAQLCFARCATLVMQDPRASYYSGISYIVTGD  115