Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
protein HrcJ |
NC_016830 (Pseudomonas fluorescens F113) |
5e-65 |
61 |
|
type III secretion protein |
NC_015379 (Pseudomonas brassicacearum NFM421) |
7e-65 |
64 |
|
type III secretion apparatus lipoprotein, YscJ/HrcJ family |
NC_022268 (Serratia sp. ATCC 39006) |
1e-64 |
64 |
|
type III secretion apparatus lipoprotein, YscJ/HrcJ family |
NC_013592 (Dickeya dadantii Ech586) |
3e-62 |
67 |
|
type III secretion apparatus lipoprotein, YscJ/HrcJ family |
NC_012912 (Dickeya zeae Ech1591) |
4e-62 |
68 |
|
type III secretion system protein |
NC_004547 (Pectobacterium atrosepticum SCRI1043) |
5e-62 |
65 |
|
YscJ/HrcJ family type III secretion apparatus lipoprotein |
NC_012917 (Pectobacterium carotovorum PC1) |
1e-61 |
65 |
|
type III secretion system protein |
NC_013971 (Erwinia amylovora ATCC 49946) |
1e-61 |
62 |
|
type III secretion inner-membrane protein HrcJ |
NC_013961 (Erwinia amylovora CFBP1430) |
1e-61 |
62 |
|
type III secretion protein |
NC_018525 (Pectobacterium carotovorum PCC21) |
4e-61 |
65 |
|
HrcJ protein |
NC_010694 (Erwinia tasmaniensis Et1/99) |
9e-61 |
69 |
|
type III secretion innermembrane protein HrcJ |
NC_017390 (Erwinia pyrifoliae DSM 12163) |
9e-61 |
61 |
|
Hrp/hrc secretion/translocation pathway protein HrcJ |
NC_012214 (Erwinia pyrifoliae Ep1/96) |
9e-61 |
61 |
|
type III secretion apparatus lipoprotein RscJ |
NC_017911 (Pseudomonas fluorescens A506) |
1e-60 |
69 |
|
putative type III secretion protein |
NC_012660 (Pseudomonas fluorescens SBW25) |
2e-60 |
62 |
|
type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ) |
NC_014500 (Dickeya dadantii 3937) |
2e-59 |
67 |
|
hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation pathway-hrcJ protein |
NC_017445 (Erwinia sp. Ejp617) |
3e-59 |
65 |
|
type III secretion protein HrcJ |
NC_007005 (Pseudomonas syringae B728a) |
2e-58 |
66 |
|
type III secretion apparatus lipoprotein, YscJ/HrcJ family |
NC_020064 (Serratia marcescens FGI94) |
1e-57 |
65 |
|
YscJ/HrcJ family type III secretion apparatus lipoprotein |
NC_009439 (Pseudomonas mendocina ymp) |
2e-57 |
63 |
|
type III secretion protein HrcJ |
NC_004578 (Pseudomonas syringae DC3000) |
2e-57 |
66 |
|
YscJ/HrcJ family type III secretion apparatus lipoprotein |
NC_015276 (Marinomonas mediterranea MMB-1) |
5e-57 |
61 |
|
type III secretion component protein HrcJ |
NC_005773 (Pseudomonas syringae 1448A) |
1e-56 |
66 |
|
nodulation protein NolT |
NC_018000 (Sinorhizobium fredii USDA 257) |
2e-27 |
44 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='DQ168848' AND ph.id_pai_orf='47' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc