Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
Helix-turn-helix domain protein |
NC_017022 (Enterococcus faecium Aus0004) |
3e-53 |
100 |
|
Helix-turn-helix domain protein |
NC_021994 (Enterococcus faecium AUS0085) |
3e-53 |
100 |
|
Helix-turn-helix. |
NC_021020 (Faecalibacterium prausnitzii SL3/3) |
8e-41 |
75 |
|
hypothetical protein |
NC_015977 (Roseburia hominis A2-183) |
5e-38 |
78 |
|
Helix-turn-helix. |
NC_021012 (Roseburia intestinalis XB6B4) |
5e-38 |
78 |
|
Helix-turn-helix. |
NC_021020 (Faecalibacterium prausnitzii SL3/3) |
6e-38 |
78 |
|
Helix-turn-helix. |
NC_021013 (Ruminococcus bromii L2-63) |
9e-38 |
78 |
|
Helix-turn-helix. |
NC_021015 ([Ruminococcus] torques L2-14) |
9e-38 |
78 |
|
hypothetical protein |
NC_013316 (Clostridium difficile R20291) |
1e-37 |
78 |
|
hypothetical protein |
NC_015977 (Roseburia hominis A2-183) |
1e-37 |
77 |
|
Helix-turn-helix. |
NC_021042 (Faecalibacterium prausnitzii L2/6) |
2e-32 |
67 |
|
Helix-turn-helix. |
NC_021042 (Faecalibacterium prausnitzii L2/6) |
2e-25 |
65 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_021994_R1' AND ph.id_pai_orf='46' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc