Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
type IV pilus biogenesis protein PilR |
NC_009708 (Yersinia pseudotuberculosis IP 31758) |
2e-139 |
100 |
|
type IV pilus integral membrane protein |
NC_008800 (Yersinia enterocolitica 8081) |
2e-130 |
87 |
|
hypothetical protein |
NC_010102 (Salmonella enterica SGSC4150; SPB7) |
2e-90 |
59 |
|
Type II secretion system F domain-containing protein |
NC_022268 (Serratia sp. ATCC 39006) |
3e-89 |
59 |
|
hypothetical protein |
NC_017445 (Erwinia sp. Ejp617) |
2e-88 |
58 |
|
hypothetical protein |
NC_005126 (Photorhabdus luminescens TTO1) |
7e-88 |
57 |
|
type IV pilus biogenesis protein PilR |
NC_014121 (Enterobacter cloacae ATCC 13047) |
1e-86 |
60 |
|
type IV pilus biogenesis protein PilR |
NC_017554 (Pantoea ananatis PA13) |
2e-82 |
57 |
|
type IV pilus biogenesis protein PilR |
NC_016816 (Pantoea ananatis LMG 5342) |
2e-80 |
56 |
|
PilR protein |
NC_011419 (Escherichia coli SE11) |
2e-77 |
49 |
|
integral membrane protein |
NC_021811 (Salmonella enterica 41578) |
6e-73 |
49 |
|
pilus biosynthesis protein PilR |
NC_021813 (Salmonella enterica CFSAN002069) |
6e-73 |
49 |
|
pilus integral membrane protein |
NC_017718 (Salmonella enterica SL1344) |
6e-73 |
49 |
|
integral membrane protein |
NC_011081 (Salmonella enterica SL476) |
6e-73 |
49 |
|
integral membrane protein |
NC_017675 (Salmonella enterica ST4/74) |
6e-73 |
49 |
|
type II secretion system F domain-containing protein |
NC_016904 (Escherichia coli KO11FL) |
4e-69 |
51 |
|
Type IVB thin prepilin integral membrane protein |
NC_017637 (Escherichia coli W) |
4e-69 |
51 |
|
putative transmembrane protein |
NC_017665 (Escherichia coli W) |
4e-69 |
51 |
|
putative transmembrane protein |
NC_018659 (Escherichia coli 2011C-3493) |
7e-69 |
51 |
|
IncI1 conjugal transfer pilus biogenesis protein PilR |
NC_017642 (Escherichia coli UMNK88) |
7e-69 |
51 |
|
putative membrane protein |
NC_003198 (Salmonella enterica CT18) |
3e-59 |
50 |
|
hypothetical protein |
NC_016832 (Salmonella enterica P-stx-12) |
3e-59 |
50 |
|
hypothetical protein |
NC_012125 (Salmonella enterica RKS4594) |
3e-59 |
50 |
|
hypothetical protein |
NC_004631 (Salmonella enterica Ty2) |
3e-59 |
50 |
|
hypothetical protein |
NC_021176 (Salmonella enterica Ty21a) |
4e-59 |
50 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_009708_P1' AND ph.id_pai_orf='46' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc