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Homologs of unnamed gene of GQ338312

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) G2583_4433
( YP_003501884.1 )

hypothetical protein

NC_013941
(Escherichia coli CB9615)

2e-53

100

2) ECH74115_5070
( YP_002273174.1 )

negative regulator GrlR

NC_011353
(Escherichia coli EC4115)

2e-53

100

3) Z5129
( NP_290278.1 )

negative regulator GrlR

NC_002655
(Escherichia coli EDL933)

2e-53

100

4) ECO55CA74_21265
( YP_006161358.1 )

negative regulator GrlR

NC_017656
(Escherichia coli RM12579)

2e-53

100

5) ECs4578
( NP_312605.1 )

negative regulator GrlR

NC_002695
(Escherichia coli Sakai)

2e-53

100

6) grlR
( YP_003080490.1 )

negative regulator GrlR

NC_013008
(Escherichia coli TW14359)

2e-53

100

7) CDCO157_4313
( YP_006315178.1 )

negative regulator GrlR

NC_017906
(Escherichia coli Xuzhou21)

2e-53

100

8) grlR
( YP_003236098.1 )

negative regulator GrlR

NC_013364
(Escherichia coli 11128)

2e-53

9) grlR
( YP_002331420.1 )

negative regulator GrlR

NC_011601
(Escherichia coli E2348/69)

7e-53

10) grlR
( YP_003232143.1 )

negative regulator GrlR

NC_013361
(Escherichia coli 11368)

1e-47

11) grlR
( YP_003223485.1 )

negative regulator GrlR

NC_013353
(Escherichia coli 12009)

2e-47

12) grlR
( YP_003366512.1 )

GrlR, global regulator of LEE repressor

NC_013716
(Citrobacter rodentium ICC168)

1e-43

13) A464_300
( YP_008320896.1 )

Orf10

NC_021870
(Salmonella bongori N268-08)

6e-13

14) SBG_0304
( YP_004729214.1 )

hypothetical protein

NC_015761
(Salmonella bongori NCTC 12419)

6e-13

• Sequence Alignments

1) ECH74115_5070 in NC_011353


> GQ338312|46|G45|255348326|ACU09468.1|Escherichia_coli_71074|-|33759..34130|-|-|type 
three secretion system protein GrlR
Length=123

 Score =  201 bits (747),  Expect = 2e-53, Method: Compositional matrix adjust.
 Identities = 123/123 (100%), Positives = 123/123 (100%), Gaps = 0/123 (0%)

Query  1    MIMKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYE  60
            MIMKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYE
Sbjct  1    MIMKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYE  60

Query  61   IPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKNTGMPQV  120
            IPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKNTGMPQV
Sbjct  61   IPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKNTGMPQV  120

Query  121  YLK  123
            YLK
Sbjct  121  YLK  123

2) Z5129 in NC_002655


> GQ338312|46|G45|255348326|ACU09468.1|Escherichia_coli_71074|-|33759..34130|-|-|type 
three secretion system protein GrlR
Length=123

 Score =  201 bits (747),  Expect = 2e-53, Method: Compositional matrix adjust.
 Identities = 123/123 (100%), Positives = 123/123 (100%), Gaps = 0/123 (0%)

Query  1    MIMKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYE  60
            MIMKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYE
Sbjct  1    MIMKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYE  60

Query  61   IPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKNTGMPQV  120
            IPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKNTGMPQV
Sbjct  61   IPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKNTGMPQV  120

Query  121  YLK  123
            YLK
Sbjct  121  YLK  123

3) ECs4578 in NC_002695


> GQ338312|46|G45|255348326|ACU09468.1|Escherichia_coli_71074|-|33759..34130|-|-|type 
three secretion system protein GrlR
Length=123

 Score =  201 bits (747),  Expect = 2e-53, Method: Compositional matrix adjust.
 Identities = 123/123 (100%), Positives = 123/123 (100%), Gaps = 0/123 (0%)

Query  1    MIMKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYE  60
            MIMKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYE
Sbjct  1    MIMKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYE  60

Query  61   IPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKNTGMPQV  120
            IPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKNTGMPQV
Sbjct  61   IPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKNTGMPQV  120

Query  121  YLK  123
            YLK
Sbjct  121  YLK  123

4) grlR in NC_013008


> GQ338312|46|G45|255348326|ACU09468.1|Escherichia_coli_71074|-|33759..34130|-|-|type 
three secretion system protein GrlR
Length=123

 Score =  201 bits (747),  Expect = 2e-53, Method: Compositional matrix adjust.
 Identities = 123/123 (100%), Positives = 123/123 (100%), Gaps = 0/123 (0%)

Query  1    MIMKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYE  60
            MIMKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYE
Sbjct  1    MIMKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYE  60

Query  61   IPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKNTGMPQV  120
            IPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKNTGMPQV
Sbjct  61   IPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKNTGMPQV  120

Query  121  YLK  123
            YLK
Sbjct  121  YLK  123

5) G2583_4433 in NC_013941


> GQ338312|46|G45|255348326|ACU09468.1|Escherichia_coli_71074|-|33759..34130|-|-|type 
three secretion system protein GrlR
Length=123

 Score =  201 bits (747),  Expect = 2e-53, Method: Compositional matrix adjust.
 Identities = 123/123 (100%), Positives = 123/123 (100%), Gaps = 0/123 (0%)

Query  1    MIMKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYE  60
            MIMKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYE
Sbjct  1    MIMKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYE  60

Query  61   IPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKNTGMPQV  120
            IPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKNTGMPQV
Sbjct  61   IPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKNTGMPQV  120

Query  121  YLK  123
            YLK
Sbjct  121  YLK  123

6) ECO55CA74_21265 in NC_017656


> GQ338312|46|G45|255348326|ACU09468.1|Escherichia_coli_71074|-|33759..34130|-|-|type 
three secretion system protein GrlR
Length=123

 Score =  201 bits (747),  Expect = 2e-53, Method: Compositional matrix adjust.
 Identities = 123/123 (100%), Positives = 123/123 (100%), Gaps = 0/123 (0%)

Query  1    MIMKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYE  60
            MIMKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYE
Sbjct  1    MIMKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYE  60

Query  61   IPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKNTGMPQV  120
            IPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKNTGMPQV
Sbjct  61   IPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKNTGMPQV  120

Query  121  YLK  123
            YLK
Sbjct  121  YLK  123

7) CDCO157_4313 in NC_017906


> GQ338312|46|G45|255348326|ACU09468.1|Escherichia_coli_71074|-|33759..34130|-|-|type 
three secretion system protein GrlR
Length=123

 Score =  201 bits (747),  Expect = 2e-53, Method: Compositional matrix adjust.
 Identities = 123/123 (100%), Positives = 123/123 (100%), Gaps = 0/123 (0%)

Query  1    MIMKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYE  60
            MIMKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYE
Sbjct  1    MIMKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYE  60

Query  61   IPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKNTGMPQV  120
            IPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKNTGMPQV
Sbjct  61   IPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKNTGMPQV  120

Query  121  YLK  123
            YLK
Sbjct  121  YLK  123

8) grlR in NC_013364


> GQ338312|46|G45|255348326|ACU09468.1|Escherichia_coli_71074|-|33759..34130|-|-|type 
three secretion system protein GrlR
Length=123

 Score =  201 bits (746),  Expect = 2e-53, Method: Compositional matrix adjust.
 Identities = 122/123 (99%), Positives = 123/123 (100%), Gaps = 0/123 (0%)

Query  1    MIMKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYE  60
            MIMKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYE
Sbjct  1    MIMKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYE  60

Query  61   IPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLIIKNTGMPQV  120
            IPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPL+IKNTGMPQV
Sbjct  61   IPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKNTGMPQV  120

Query  121  YLK  123
            YLK
Sbjct  121  YLK  123

9) grlR in NC_011601


> GQ338312|46|G45|255348326|ACU09468.1|Escherichia_coli_71074|-|33759..34130|-|-|type 
three secretion system protein GrlR
Length=123

 Score =  199 bits (740),  Expect = 7e-53, Method: Compositional matrix adjust.
 Identities = 121/122 (99%), Positives = 122/122 (100%), Gaps = 0/122 (0%)

Query  1    MIMKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYE  60
            MIMKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYE
Sbjct  1    MIMKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYE  60

Query  61   IPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLIIKNTGMPQV  120
            IPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPL+IKNTGMPQV
Sbjct  61   IPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKNTGMPQV  120

Query  121  YL  122
            YL
Sbjct  121  YL  122

10) grlR in NC_013361


> GQ338312|46|G45|255348326|ACU09468.1|Escherichia_coli_71074|-|33759..34130|-|-|type 
three secretion system protein GrlR
Length=123

 Score =  182 bits (673),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 108/118 (92%), Positives = 116/118 (99%), Gaps = 0/118 (0%)

Query  1    MIMKDGIYSIIFISNEDSCGEGILIKNGNLITGGDIASVYQGVLSEEEDIILHVHRYNHE  60
            MIMKDGIYSIIFISNEDSCGEGILIKNGN+ITGGDIASVYQGVLSE+EDIILHVHRYN E
Sbjct  1    MIMKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYE  60

Query  61   IPSVLNIEQDYQLVIPKKVLSNDSNVTLHCHVRGNEKLFVDVYARFIEPLIIKNTEIS  118
            IPSVLNIEQDYQLVIPKKVLSND+N+TLHCHVRGNEKLFVDVYA+FIEPL+IKNT ++
Sbjct  61   IPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKNTGMP  118

11) grlR in NC_013353


> GQ338312|46|G45|255348326|ACU09468.1|Escherichia_coli_71074|-|33759..34130|-|-|type 
three secretion system protein GrlR
Length=123

 Score =  181 bits (671),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 108/118 (92%), Positives = 115/118 (98%), Gaps = 0/118 (0%)

Query  1    MIMKDGIYSIIFISNEDSCGEGILIKNGNLITGGDIASVYQGVLSEEEDIILHVHRYNHE  60
            MIMKDGIYSIIFISNEDSCGEGILIKNGN+ITGGDIASVYQGVLSE+EDIILHVHRYN E
Sbjct  1    MIMKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYE  60

Query  61   IPSVLNIEQDYQLVIPKKVLSNDSNVTLHCHVRGNEKLFVDVYARFIEPLTIKNTEIS  118
            IPSVLNIEQDYQLVIPKKVLSND+N+TLHCHVRGNEKLFVDVYA+FIEPL IKNT ++
Sbjct  61   IPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKNTGMP  118

12) grlR in NC_013716


> GQ338312|46|G45|255348326|ACU09468.1|Escherichia_coli_71074|-|33759..34130|-|-|type 
three secretion system protein GrlR
Length=123

 Score =  168 bits (622),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 98/112 (88%), Positives = 108/112 (97%), Gaps = 0/112 (0%)

Query  1    MKDGIYSITFISNEDSCGEGILIKNGNLITGGDISSVYQGGLTEEEDIIFHVHRYNHEIP  60
            MKDGIYSI FISNEDSCGEGILIKNGN+ITGGDI+SVYQG L+E+EDII+HVHRYN EIP
Sbjct  3    MKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYEIP  62

Query  61   SVLSIEQDYQLVIPKKILSNDNNVTLHCHVRGNEKLFVDVYVRFIEPLIIKN  112
            SVL+IEQDYQLVIPKK+LSNDNN+TLHCHVRGNEKLFVDVY +FIEPL+IKN
Sbjct  63   SVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKN  114

13) SBG_0304 in NC_015761


> GQ338312|46|G45|255348326|ACU09468.1|Escherichia_coli_71074|-|33759..34130|-|-|type 
three secretion system protein GrlR
Length=123

 Score = 67.1 bits (235),  Expect = 6e-13, Method: Compositional matrix adjust.
 Identities = 46/113 (41%), Positives = 68/113 (61%), Gaps = 2/113 (1%)

Query  1    MKDGVYHVAFTSNRGSVGEGILVLCCGLVNGGDIGFVYQGKLARPE-MTLRITRYYDGIP  59
            MKDG+Y + F SN +S GEGIL+    ++ GGDI+ VYQG L+  E + L++ RY   IP
Sbjct  3    MKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYEIP  62

Query  60   SVLGIENDYELELLMQYSNETEGKYMLHGYVREYPELTIDACASFLMPMLKSD  112
            SVL IE+DY+L +  +     + +  LH  VR    L +D  A F+ P++  +
Sbjct  63   SVLNIEQDYQLVIPKK-VLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKN  114

14) A464_300 in NC_021870


> GQ338312|46|G45|255348326|ACU09468.1|Escherichia_coli_71074|-|33759..34130|-|-|type 
three secretion system protein GrlR
Length=123

 Score = 67.1 bits (235),  Expect = 6e-13, Method: Compositional matrix adjust.
 Identities = 46/113 (41%), Positives = 68/113 (61%), Gaps = 2/113 (1%)

Query  1    MKDGVYHVAFTSNRGSVGEGILVLCCGLVNGGDIGFVYQGKLARPE-MTLRITRYYDGIP  59
            MKDG+Y + F SN +S GEGIL+    ++ GGDI+ VYQG L+  E + L++ RY   IP
Sbjct  3    MKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYEIP  62

Query  60   SVLGIENDYELELLMQYSNETEGKYMLHGYVREYPELTIDACASFLMPMLKSD  112
            SVL IE+DY+L +  +     + +  LH  VR    L +D  A F+ P++  +
Sbjct  63   SVLNIEQDYQLVIPKK-VLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKN  114