Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
phage holin |
NC_012962 (Photorhabdus asymbiotica ATCC 43949) |
1e-35 |
77 |
|
similar to pahge holin |
NC_012962 (Photorhabdus asymbiotica ATCC 43949) |
8e-36 |
77 |
|
phage holin |
NC_012962 (Photorhabdus asymbiotica ATCC 43949) |
9e-36 |
97 |
|
hypothetical protein |
NC_005126 (Photorhabdus luminescens TTO1) |
2e-35 |
97 |
|
holin |
NC_013892 (Xenorhabdus bovienii SS-2004) |
6e-25 |
61 |
|
holin |
NC_013892 (Xenorhabdus bovienii SS-2004) |
2e-23 |
62 |
|
Holin (Lysis protein 13) |
NC_013892 (Xenorhabdus bovienii SS-2004) |
3e-23 |
62 |
|
Holin (gpS protein) |
NC_017663 (Escherichia coli P12b) |
2e-21 |
59 |
|
putative holin |
NC_013364 (Escherichia coli 11128) |
4e-21 |
57 |
|
holin protein |
NC_013361 (Escherichia coli 11368) |
4e-21 |
57 |
|
holin |
NC_008563 (Escherichia coli APEC O1) |
4e-21 |
57 |
|
holin protein |
NC_011601 (Escherichia coli E2348/69) |
4e-21 |
57 |
|
phage holin |
NC_009800 (Escherichia coli HS) |
4e-21 |
57 |
|
phage holin, lambda family |
NC_017628 (Escherichia coli IHE3034) |
4e-21 |
57 |
|
phage holin, lambda family |
NC_016902 (Escherichia coli KO11FL) |
4e-21 |
57 |
|
Holin |
NC_011993 (Escherichia coli LF82) |
4e-21 |
57 |
|
putative holin |
NC_017634 (Escherichia coli NRG 857C) |
4e-21 |
57 |
|
Gene 60 protein |
NC_017663 (Escherichia coli P12b) |
4e-21 |
57 |
|
Gene 60 protein |
NC_017663 (Escherichia coli P12b) |
4e-21 |
57 |
|
phage holin, lambda family |
NC_022370 (Escherichia coli PMV-1) |
4e-21 |
57 |
|
lysis protein S and lysis inhibitor (holin protein) |
NC_011742 (Escherichia coli S88) |
4e-21 |
57 |
|
putative holin |
NC_017632 (Escherichia coli UM146) |
4e-21 |
57 |
|
phage holin |
NC_017641 (Escherichia coli UMNK88) |
4e-21 |
57 |
|
holin |
NC_007946 (Escherichia coli UTI89) |
4e-21 |
57 |
|
holin |
NC_017635 (Escherichia coli W) |
4e-21 |
57 |
|
putative holin |
NC_017664 (Escherichia coli W) |
4e-21 |
57 |
|
holin-like protein |
NC_006905 (Salmonella enterica SC-B67) |
4e-21 |
57 |
|
S protein |
NC_017328 (Shigella flexneri 2002017) |
4e-21 |
57 |
|
cell lysis protein |
NC_008258 (Shigella flexneri 8401) |
4e-21 |
57 |
|
holin |
NC_011147 (Salmonella enterica AKU12601) |
4e-21 |
54 |
|
lysis (holin) |
NC_006511 (Salmonella enterica ATCC 9150) |
4e-21 |
54 |
|
phage holin, lambda family |
NC_011205 (Salmonella enterica CT_02021853) |
4e-21 |
54 |
|
hypothetical protein |
NC_010067 (Salmonella enterica RSK2980) |
4e-21 |
54 |
|
enterobacteria phage lambda, anti-holin |
NC_012892 (Escherichia coli BL21(DE3)) |
5e-21 |
57 |
|
cell lysis protein |
NC_012971 (Escherichia coli BL21(DE3)) |
5e-21 |
57 |
|
phage holin, lambda family |
NC_012947 (Escherichia coli Escherichia coli BL21-Gold(DE3)pLysS AG) |
5e-21 |
57 |
|
Holin (gpS protein) |
NC_012759 (Escherichia coli K-12) |
5e-21 |
57 |
|
holin-like protein |
NC_012125 (Salmonella enterica RKS4594) |
5e-21 |
57 |
|
phage holin, lambda family |
NC_011283 (Klebsiella pneumoniae 342) |
2e-20 |
59 |
|
phage holin |
NC_010465 (Yersinia pseudotuberculosis YPIII) |
1e-15 |
46 |
|
phage lysis protein S |
NC_017445 (Erwinia sp. Ejp617) |
3e-15 |
49 |
|
phage holin |
NC_017731 (Providencia stuartii MRSN 2154) |
5e-15 |
41 |
|
phage lysis protein S |
NC_012214 (Erwinia pyrifoliae Ep1/96) |
7e-15 |
47 |
|
phage holin, lambda family |
NC_015567 (Serratia plymuthica AS9) |
8e-15 |
50 |
|
phage holin, lambda family |
NC_015566 (Serratia sp. AS12) |
8e-15 |
50 |
|
phage holin, lambda family |
NC_017573 (Serratia sp. AS13) |
8e-15 |
50 |
|
Holin; gpS protein; Includes: RecName: Full=Lysis protein S; Includes: RecName: Full=Lysis inhibitor |
NC_017390 (Erwinia pyrifoliae DSM 12163) |
2e-14 |
47 |
|
phage holin (lysis protein) |
NC_022000 (Proteus mirabilis BB2000) |
5e-13 |
46 |
|
phage holin |
NC_010554 (Proteus mirabilis HI4320) |
5e-13 |
46 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='AY144116' AND ph.id_pai_orf='46' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc