| >AF326777|46|G34|15808731|AAL08460.1|Shigella_flexneri_2a_YSH6000|-|46770..48155|-|-|unknown 
          Length = 1386
 Score = 1024 bits (2643), Expect = e-299
 Identities = 590/692 (85%)
 Strand = Plus / Plus
Query: 104 cgcgaaatagaccatctgcaggcgcaactggataagctgcgccggatgaacttcggcagt 163
           |||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||
Sbjct: 103 cgcgaaatagaccatctgcaggcgcagctggataaactccgccggatgaacttcggcagt 162
Query: 164 cgttccgaaaaggtatcccgccgtatcgcgcaaatggaagctgacctgaacctgctgcag 223
           ||||||||||| || |||||||||||||| ||||||||||| || ||||||| ||| |||
Sbjct: 163 cgttccgaaaaagtctcccgccgtatcgcacaaatggaagccgatctgaaccggcttcag 222
Query: 224 caggaaagcgatacgctgaccggccgggtggatgacccggcagtgcagcgcccgctgcgt 283
            | || |||||||||||||| ||  ||||| ||||||||||||| ||||| ||| |||||
Sbjct: 223 aaagagagcgatacgctgactggtagggtgtatgacccggcagtacagcgtccgttgcgt 282
Query: 284 cagacccgcacccgcaaaccgttccctgagtcactcccacgggatgagaagcggctgctg 343
           |||||||||||||| || ||||||||||| ||||| || || || || ||||| ||| ||
Sbjct: 283 cagacccgcacccgtaagccgttccctgaatcactaccccgtgacgaaaagcgactgttg 342
Query: 344 ccgactgagccgtgttgcccggagtgcggtggttcgctgagttacctgggtgaggatgcc 403
           ||  | | |||||| |||||| | ||||| ||||| ||||| || ||||| |||||| ||
Sbjct: 343 cctgcggcgccgtgctgcccgaactgcggcggttcactgagctatctgggcgaggatacc 402
Query: 404 gccgaacagctggagctgatgcgcagcgccttccgggttatccggacagtccgtgaaaag 463
           ||||||||||||||| ||||||| ||||||||||||||||||||||| || || ||||| 
Sbjct: 403 gccgaacagctggagttgatgcgtagcgccttccgggttatccggacggtacgggaaaaa 462
Query: 464 catgcctgccgtcggtgcgatcgcatcgttcaggccccggctccttcgcgccccatcgaa 523
           ||||||||   || |||||||  |||||| ||||| || || |||||||| |||||||| 
Sbjct: 463 catgcctgtactcagtgcgataccatcgtgcaggcacctgcaccttcgcggcccatcgag 522
Query: 524 cgggggatcgccggaccggggctgctggcccgagtgctgacctcaaagtatgcagagcac 583
           ||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 523 cggggtatcgccggaccggggctgctggcccgcgtgctgacctcgaagtatgcagagcac 582
Query: 584 acaccgctgtatcgccagtcggagatctatgcccgccagggtgtagtgttgagtcgttct 643
           || ||||||||| ||||||| || || || | ||| || ||||| | | |||| ||||| 
Sbjct: 583 accccgctgtattgccagtcagaaatatacggccggcaaggtgtggagctgagccgttca 642
Query: 644 gtactgtcgggctgggtggatgcgtgttgtcgtctgctggcaccgctggatgaagccctt 703
            | |||||||||||||||||||| || || || |||||| | |||||||| || || |||
Sbjct: 643 ctgctgtcgggctgggtggatgcatgctgccggctgctgtctccgctggaagaggcgctt 702
Query: 704 cagcactatgtcctgaccgacggcaaactccatgctgacgatacgcctgtcccggtgctg 763
           ||   ||||||| |||| ||||||||||||||||| || ||||| || |||| ||| |||
Sbjct: 703 catggctatgtcatgactgacggcaaactccatgccgatgataccccggtccaggtactg 762
Query: 764 ttgccgggcaataagaagacgaagaccgggcg 795
            ||||||| |||||||||||||||||||||||
Sbjct: 763 ctgccgggtaataagaagacgaagaccgggcg 794
 Score = 305 bits (786), Expect = 6e-83
 Identities = 175/206 (85%)
 Strand = Plus / Plus
Query: 847  gcagtgtggttcgcttacagcccggacagaaaaggtatccaccctcagacccatcttgca 906
            ||||||||||||||||||||||||||||||||| | ||||| || ||||| |||||||| 
Sbjct: 847  gcagtgtggttcgcttacagcccggacagaaaaagcatccatccgcagactcatcttgct 906
Query: 907  ggcttcagtggcgtactgcaggctgatgcctacgccgggttcaacgagctctaccgcgac 966
             ||||||| || || ||||| || ||||| |||||||||||||||||||| || ||| | 
Sbjct: 907  tgcttcagcggtgtgctgcaagcggatgcgtacgccgggttcaacgagctgtatcgcaat 966
Query: 967  ggccatataaaggaagccgcgtgctgggcccatgcccgccgaaaaatccacgatgttcac 1026
            ||    |||| |||||| || |||||||| |||||||||||||| ||||||||||| |||
Sbjct: 967  ggtgggataacggaagctgcctgctgggctcatgcccgccgaaagatccacgatgtgcac 1026
Query: 1027 gtccgtaccccgtcagtcctgacgga 1052
            ||||| | ||||||||  ||||||||
Sbjct: 1027 gtccgcatcccgtcagcactgacgga 1052
 Score = 186 bits (480), Expect = 3e-47
 Identities = 96/101 (95%)
 Strand = Plus / Plus
Query: 1   atgaacgatacctcttctgacgacatccttctgctgaaacagcgcctggccgaacaggaa 60
           |||||||| | |||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 1   atgaacgacatctcttctgacgacatcttcctgctgaaacagcgcctggccgaacaggaa 60
Query: 61  gcgttgatccacgccctgcaggaaaagctgagcaaccggga 101
           ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 61  gcgctgatccacgccctgcaggaaaagctgagcaaccggga 101
 Score = 129 bits (332), Expect = 6e-30
 Identities = 73/86 (85%)
 Strand = Plus / Plus
Query: 1354 ctgttcttcggctcggatcatggtggtgagcgcggtgcgtcactgtacagtcttatcggg 1413
            |||||||||||||| |  |||||||||||||| || |||  ||||||||| || ||||||
Sbjct: 1201 ctgttcttcggctctggccatggtggtgagcggggagcgctactgtacagcctgatcggg 1260
Query: 1414 acgtgcaaattaaacggcgtggatcc 1439
            ||||||||| | || | |||||||||
Sbjct: 1261 acgtgcaaactgaatgacgtggatcc 1286
 |