Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
hypothetical protein |
NC_014256 (Helicobacter pylori B8) |
7e-24 |
100 |
|
hypothetical protein |
NC_021217 (Helicobacter pylori UM037) |
7e-24 |
100 |
|
hypothetical protein |
NC_019563 (Helicobacter pylori Aklavik86) |
8e-18 |
80 |
|
hypothetical protein |
NC_017063 (Helicobacter pylori ELS37) |
8e-18 |
86 |
|
urease-enhancing factor |
NC_017366 (Helicobacter pylori F32) |
1e-17 |
84 |
|
urease-enhancing factor Lpp |
NC_012973 (Helicobacter pylori B38) |
1e-16 |
77 |
|
urease-enhancing factor |
NC_011333 (Helicobacter pylori G27) |
3e-16 |
81 |
|
urease-enhancing factor |
NC_017362 (Helicobacter pylori Lithuania75) |
4e-15 |
81 |
|
putative lipoprotein |
NC_022130 (Helicobacter pylori SouthAfrica20) |
5e-15 |
70 |
|
hypothetical protein |
NC_021215 (Helicobacter pylori UM032) |
9e-15 |
78 |
|
hypothetical protein |
NC_021882 (Helicobacter pylori UM298) |
9e-15 |
78 |
|
hypothetical protein |
NC_021216 (Helicobacter pylori UM299) |
9e-15 |
78 |
|
urease-enhancing factor |
NC_020509 (Helicobacter pylori OK310) |
5e-14 |
82 |
|
urease-enhancing factor |
NC_017378 (Helicobacter pylori Puno120) |
5e-14 |
80 |
|
urease-enhancing factor |
NC_019560 (Helicobacter pylori Aklavik117) |
6e-14 |
74 |
|
urease-enhancing factor |
NC_017355 (Helicobacter pylori v225d) |
2e-12 |
80 |
|
urease-enhancing factor |
NC_017358 (Helicobacter pylori Cuz20) |
4e-12 |
70 |
|
urease-enhancing factor |
NC_017741 (Helicobacter pylori Shi112) |
4e-12 |
70 |
|
hypothetical protein |
NC_021218 (Helicobacter pylori UM066) |
5e-12 |
76 |
|
urease-enhancing factor |
NC_014560 (Helicobacter pylori SJM180) |
7e-11 |
79 |
|
hypothetical protein |
NC_017374 (Helicobacter pylori 2017) |
4e-09 |
75 |
|
hypothetical protein |
NC_017381 (Helicobacter pylori 2018) |
4e-09 |
75 |
|
hypothetical protein |
NC_017357 (Helicobacter pylori 908) |
4e-09 |
75 |
|
urease-enhancing factor |
NC_017371 (Helicobacter pylori Gambia94/24) |
4e-09 |
75 |
|
hypothetical protein |
NC_017742 (Helicobacter pylori PeCan18) |
4e-09 |
75 |
|
hypothetical protein |
NC_017735 (Helicobacter cetorum MIT 99-5656) |
3e-06 |
46 |
|
hypothetical protein |
NC_017737 (Helicobacter cetorum MIT 00-7128) |
5e-04 |
46 |
|
hypothetical protein |
NC_017378 (Helicobacter pylori Puno120) |
0.004 |
46 |
|
hypothetical protein |
NC_017379 (Helicobacter pylori Puno135) |
0.005 |
45 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_014256_P1' AND ph.id_pai_orf='45' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc