Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
TraG family protein |
NC_004668 (Enterococcus faecalis V583) |
0.0 |
100 |
|
conjugative transfer protein Tn1549-like, CTn4-Orf4 |
NC_009089 (Clostridium difficile 630) |
0.0 |
65 |
|
Type IV secretory pathway, VirD4 components |
NC_021015 ([Ruminococcus] torques L2-14) |
0.0 |
65 |
|
hypothetical protein |
NC_018867 (Dehalobacter sp. CF) |
2e-177 |
63 |
|
conjugative transfer protein Tn1549-like, CTn5-Orf5 |
NC_009089 (Clostridium difficile 630) |
6e-176 |
65 |
|
hypothetical protein |
NC_022246 (Streptococcus intermedius B196) |
7e-176 |
65 |
|
TRAG family protein |
NC_013164 (Anaerococcus prevotii DSM 20548) |
2e-175 |
65 |
|
Type IV secretory pathway, VirD4 components |
NC_021013 (Ruminococcus bromii L2-63) |
5e-175 |
65 |
|
TraG/TraD family |
NC_008024 (Streptococcus pyogenes MGAS10750) |
9e-175 |
65 |
|
conjugative transfer protein Tn1549-like, CTn2-Orf5 |
NC_009089 (Clostridium difficile 630) |
2e-174 |
65 |
|
hypothetical protein |
NC_022239 (Streptococcus anginosus C238) |
3e-174 |
65 |
|
putative conjugal transfer protein |
NC_022246 (Streptococcus intermedius B196) |
4e-174 |
65 |
|
TraG/TraD family protein |
NC_015278 (Aerococcus urinae ACS-120-V-Col10a) |
5e-174 |
64 |
|
Protein virD4 |
NC_019042 (Streptococcus dysgalactiae AC-2713) |
1e-173 |
65 |
|
putative conjugal transfer protein |
NC_017567 (Streptococcus dysgalactiae ATCC 12394) |
1e-173 |
65 |
|
TraG family protein |
NC_022239 (Streptococcus anginosus C238) |
2e-173 |
64 |
|
hypothetical protein |
NC_022237 (Streptococcus intermedius C270) |
2e-173 |
64 |
|
hypothetical protein |
NC_022239 (Streptococcus anginosus C238) |
4e-173 |
64 |
|
type IV secretory pathway protein VirD4 |
NC_014494 (Streptococcus pneumoniae AP200) |
6e-173 |
65 |
|
TraG family protein |
NC_016630 (Filifactor alocis ATCC 35896) |
2e-172 |
65 |
|
TrsK-like protein |
NC_021507 (Streptococcus agalactiae ILRI112) |
7e-172 |
64 |
|
hypothetical protein |
NC_016048 (Oscillibacter valericigenes Sjm18-20) |
1e-171 |
62 |
|
TRAG family protein |
NC_014828 (Ethanoligenens harbinense YUAN-3) |
1e-169 |
62 |
|
putative conjugal transfer protein |
NC_017620 (Streptococcus suis D9) |
3e-168 |
67 |
|
Type IV secretory pathway, VirD4 components |
NC_021042 (Faecalibacterium prausnitzii L2/6) |
5e-167 |
62 |
|
Type IV secretory pathway, VirD4 components |
NC_021009 (Coprococcus catus GD/7) |
3e-158 |
64 |
|
TraG/TraD family protein |
NC_017022 (Enterococcus faecium Aus0004) |
7e-158 |
62 |
|
Type IV secretory pathway, VirD4 components |
NC_021022 ([Ruminococcus] obeum A2-162) |
1e-157 |
61 |
|
TRAG family protein |
NC_014376 (Clostridium saccharolyticum WM1) |
1e-157 |
59 |
|
Type IV secretory pathway, VirD4 components |
NC_021019 (Eubacterium cylindroides T2-87) |
3e-156 |
60 |
|
Type IV secretory pathway, VirD4 components |
NC_021020 (Faecalibacterium prausnitzii SL3/3) |
1e-154 |
63 |
|
TraG family protein |
NC_016630 (Filifactor alocis ATCC 35896) |
5e-154 |
59 |
|
Type IV secretory pathway, VirD4 components |
NC_021022 ([Ruminococcus] obeum A2-162) |
9e-153 |
59 |
|
Type IV secretory pathway, VirD4 components |
NC_021042 (Faecalibacterium prausnitzii L2/6) |
2e-152 |
59 |
|
Type IV secretory pathway, VirD4 components |
NC_021022 ([Ruminococcus] obeum A2-162) |
2e-151 |
69 |
|
hypothetical protein |
NC_014169 (Bifidobacterium longum JDM301) |
7e-150 |
63 |
|
TRAG family protein |
NC_014828 (Ethanoligenens harbinense YUAN-3) |
4e-149 |
56 |
|
Type IV secretory pathway, VirD4 components |
NC_021014 (Ruminococcus sp. SR1/5) |
5e-148 |
58 |
|
plasmid transfer factor-like protein |
NC_009706 (Clostridium kluyveri DSM 555) |
5e-142 |
53 |
|
hypothetical protein |
NC_011837 (Clostridium kluyveri NBRC 12016) |
6e-142 |
53 |
|
Type IV secretory pathway, VirD4 components |
NC_021022 ([Ruminococcus] obeum A2-162) |
3e-138 |
70 |
|
Type IV secretory pathway, VirD4 components |
NC_021047 (Clostridium saccharolyticum K10) |
1e-136 |
52 |
|
hypothetical protein |
NC_015737 (Clostridium sp. SY8519) |
1e-134 |
59 |
|
Type IV secretory pathway, VirD4 components |
NC_021042 (Faecalibacterium prausnitzii L2/6) |
6e-134 |
63 |
|
plasmid transfer factor-like protein |
NC_015977 (Roseburia hominis A2-183) |
1e-133 |
53 |
|
Type IV secretory pathway, VirD4 components |
NC_021042 (Faecalibacterium prausnitzii L2/6) |
1e-132 |
53 |
|
Type IV secretory pathway, VirD4 components |
NC_021042 (Faecalibacterium prausnitzii L2/6) |
3e-130 |
51 |
|
TraG/TraD family protein |
NC_021994 (Enterococcus faecium AUS0085) |
8e-121 |
64 |
|
conjugal transfer protein |
NC_018081 (Enterococcus hirae ATCC 9790) |
2e-109 |
48 |
|
hypothetical protein |
NC_016048 (Oscillibacter valericigenes Sjm18-20) |
4e-89 |
43 |
|
TRAG family protein |
NC_014825 (Ruminococcus albus 7) |
9e-87 |
43 |
|
hypothetical protein |
NC_018867 (Dehalobacter sp. CF) |
3e-86 |
46 |
|
hypothetical protein |
NC_018866 (Dehalobacter sp. DCA) |
3e-86 |
46 |
|
Type IV secretory pathway, VirD4 components |
NC_021009 (Coprococcus catus GD/7) |
3e-86 |
42 |
|
hypothetical protein |
NC_018867 (Dehalobacter sp. CF) |
2e-82 |
46 |
|
hypothetical protein |
NC_018866 (Dehalobacter sp. DCA) |
2e-82 |
46 |
|
TraG/TraD family protein |
NC_008023 (Streptococcus pyogenes MGAS2096) |
7e-78 |
41 |
|
Type IV secretory pathway, VirD4 components |
NC_021013 (Ruminococcus bromii L2-63) |
4e-77 |
41 |
|
Type IV secretory pathway, VirD4 components |
NC_021012 (Roseburia intestinalis XB6B4) |
1e-76 |
42 |
|
Type IV secretory pathway, VirD4 components |
NC_021040 (Roseburia intestinalis M50/1) |
9e-77 |
42 |
|
Type IV secretory pathway, VirD4 components |
NC_021011 (Eubacterium siraeum 70/3) |
6e-75 |
42 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_004668_R1' AND ph.id_pai_orf='45' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc