Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of tnpA gene of EU780013

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) ABK1_0263
( YP_005512835.1 )

Transposase TnpA1

NC_017162
(Acinetobacter baumannii 1656-2)

0.0

100

2) ABK1_0260
( YP_005512832.1 )

Putative transposase TnpA2

NC_017162
(Acinetobacter baumannii 1656-2)

2e-127

• Sequence Alignments

1) ABK1_0263 in NC_017162


> EU780013|45|G27|192822668|ACF06177.1|Klebsiella_pneumoniae_12836|-|30435..31700|tnpA|-|transposase
Length=421

 Score =  684 bits (2587),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 421/421 (100%), Positives = 421/421 (100%), Gaps = 0/421 (0%)

Query  1    MKQNQITAFSTIFEALFSEQQLNSLGVQTHMIERFRLITPAKLCLAFVCALGSGNARTIA  60
            MKQNQITAFSTIFEALFSEQQLNSLGVQTHMIERFRLITPAKLCLAFVCALGSGNARTIA
Sbjct  1    MKQNQITAFSTIFEALFSEQQLNSLGVQTHMIERFRLITPAKLCLAFVCALGSGNARTIA  60

Query  61   DIHRYFNHLHSMSVRLKPFHNQLVKLGTPEFMRQVFEQALALHLPAMHTFSDAYRGHFKQ  120
            DIHRYFNHLHSMSVRLKPFHNQLVKLGTPEFMRQVFEQALALHLPAMHTFSDAYRGHFKQ
Sbjct  61   DIHRYFNHLHSMSVRLKPFHNQLVKLGTPEFMRQVFEQALALHLPAMHTFSDAYRGHFKQ  120

Query  121  VLLQDGTSFAVHDGLSLHFPGRFSTHSPAAVELHVTYDLEKAQPVRVSLSEDTASERDYL  180
            VLLQDGTSFAVHDGLSLHFPGRFSTHSPAAVELHVTYDLEKAQPVRVSLSEDTASERDYL
Sbjct  121  VLLQDGTSFAVHDGLSLHFPGRFSTHSPAAVELHVTYDLEKAQPVRVSLSEDTASERDYL  180

Query  181  PVAQSLRGCLLMADAGYFSKAYIESLQNEAASFVLRMPASVNPMATCNQTGLCQPLRSWL  240
            PVAQSLRGCLLMADAGYFSKAYIESLQNEAASFVLRMPASVNPMATCNQTGLCQPLRSWL
Sbjct  181  PVAQSLRGCLLMADAGYFSKAYIESLQNEAASFVLRMPASVNPMATCNQTGLCQPLRSWL  240

Query  241  AVLPKHGELDLDVQWPDGPVYRCVLFASTDHKDKPVCLCTNLDRHTFPAATVGEWYRLRW  300
            AVLPKHGELDLDVQWPDGPVYRCVLFASTDHKDKPVCLCTNLDRHTFPAATVGEWYRLRW
Sbjct  241  AVLPKHGELDLDVQWPDGPVYRCVLFASTDHKDKPVCLCTNLDRHTFPAATVGEWYRLRW  300

Query  301  QIELLFKEWKSLNSLNKFNTEYSTIAETLIWGSLLAATLKRWLINGAQQKYRRVLSMFSG  360
            QIELLFKEWKSLNSLNKFNTEYSTIAETLIWGSLLAATLKRWLINGAQQKYRRVLSMFSG
Sbjct  301  QIELLFKEWKSLNSLNKFNTEYSTIAETLIWGSLLAATLKRWLINGAQQKYRRVLSMFSG  360

Query  361  AKTANQWWLPFCIKWACSGITEIAAELGKVFAFLAEHCQRVNVKRDQKSGAFKVLEITYE  420
            AKTANQWWLPFCIKWACSGITEIAAELGKVFAFLAEHCQRVNVKRDQKSGAFKVLEITYE
Sbjct  361  AKTANQWWLPFCIKWACSGITEIAAELGKVFAFLAEHCQRVNVKRDQKSGAFKVLEITYE  420

Query  421  S  421
            S
Sbjct  421  S  421

2) ABK1_0260 in NC_017162


> EU780013|45|G27|192822668|ACF06177.1|Klebsiella_pneumoniae_12836|-|30435..31700|tnpA|-|transposase
Length=421

 Score =  449 bits (1690),  Expect = 2e-127, Method: Compositional matrix adjust.
 Identities = 263/418 (63%), Positives = 343/418 (83%), Gaps = 0/418 (0%)

Query  1    MKQQQDTrfssaferffsaaeLDALGKQSGFMKRRRQVTPQKFCMALVSALGAGTTNSIA  60
            MKQ+Q T FS+ FE +FS  +L++LG Q+  + R R +TP K+C+A+V ALG+G + +IA
Sbjct  1    MKQNQITAFSTIFEALFSEQQLNSLGVQTHMIERFRLITPAKLCLAFVCALGSGNARTIA  60

Query  61   DVHRQFNHMHSTDIKLKPFHKQLVKMAAPEFMREVFEKALALHLPDMFAIRNKYQDMFKR  120
            D+HR FNH+HS  ++LKPFH+QLVK+++PEFMR+VFE+ALALHLP M ++ + Y++ FK+
Sbjct  61   DIHRYFNHLHSMSVRLKPFHNQLVKLGTPEFMRQVFEQALALHLPAMHTFSDAYRGHFKQ  120

Query  121  IILQDGTSFAVHDDLMFYFPGRFNENSPAAVELHVTYDVFKGQPDGVSLTEDTAPERDYL  180
            ++LQDGTSFAVHD+L + FPGRF+ +SPAAVELHVTYD+ K+QP  VSL+EDTA+ERDYL
Sbjct  121  VLLQDGTSFAVHDGLSLHFPGRFSTHSPAAVELHVTYDLEKAQPVRVSLSEDTASERDYL  180

Query  181  PSPASLSGCLFMADAGYFSKAYIQQLQEACAYFIMRMCNRVNPMAVCTKTQQMKPLKTWL  240
            P + SL GCL+MADAGYFSKAYI+ LQ+  A F++RM   VNPMA C +T   +PL++WL
Sbjct  181  PVAQSLRGCLLMADAGYFSKAYIESLQNEAASFVLRMPASVNPMATCNQTGLCQPLRSWL  240

Query  241  KELPNAGVLDLDVQWPNGPVYRCVAFAALDHKKRHVLVCTNLDREQFPPAVVGDFYRVRW  300
              LP+ G LDLDVQWP+GPVYRCV FA+ DHK + V +CTNLDR+ FP+A VG+ YR+RW
Sbjct  241  AVLPKHGELDLDVQWPDGPVYRCVLFASTDHKDKPVCLCTNLDRHTFPAATVGEWYRLRW  300

Query  301  QIELLFKEWKSMNNLNKFDTGHATIVETLIWGSLLAATLKRWLINAAQKKYNRVLSLFTG  360
            QIELLFKEWKS+N+LNKF+T  +TI ETLIWGSLLAATLKRWLIN+AQ+KY RVLS+F+G
Sbjct  301  QIELLFKEWKSLNSLNKFNTEYSTIAETLIWGSLLAATLKRWLINGAQQKYRRVLSMFSG  360

Query  361  AKTAHMWWIPFCFDIAMSRGTDLAKAMNNALAFLAQHCQRQNVKRDQISGVYKLLNNT  418
            AKTA+ WW+PFC+  A S  T++A  + + +AFLA+HCQR NVKRDQ SG +K+L+ T
Sbjct  361  AKTANQWWLPFCIKWACSGITEIAAELGKVFAFLAEHCQRVNVKRDQKSGAFKVLEIT  418