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PAthogenisity Island DataBase (PAI DB)

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Homologs of unnamed gene of AF447814

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SFxv_2953
( YP_005728319.1 )

putative IS2 ORF

NC_017328
(Shigella flexneri 2002017)

3e-36

2) SFxv_3830
( YP_005729117.1 )

putative IS2 ORF

NC_017328
(Shigella flexneri 2002017)

1e-33

• Sequence Alignments

1) SFxv_2953 in NC_017328


> AF447814|45|G45|18265904|AAL67377.1|Escherichia_coli_CFT073|-|32673..32975|-|-|insertion 
sequence protein
Length=100

 Score =  144 bits (530),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 90/98 (92%), Positives = 92/98 (94%), Gaps = 4/98 (4%)

Query  13   RFDGGTARFSLKQQRILAHEPVNTFGIDRRHTIKFCLSAKQRPYPTITIRGQLSDNMVYT  72
            R+ G    FSLKQQRILAH+PVNTFGIDRRHTIKF LSAKQRPYPTITIRGQLSDNMVYT
Sbjct  7    RYSG----FSLKQQRILAHDPVNTFGIDRRHTIKFGLSAKQRPYPTITIRGQLSDNMVYT  62

Query  73   EKHIRIISVTTAAAIHPVIGSSENDVQLRTRHPETTAD  110
            EKHIRIISVTTAAAIHPVIGSSENDVQLRTRHPETTAD
Sbjct  63   EKHIRIISVTTAAAIHPVIGSSENDVQLRTRHPETTAD  100

2) SFxv_3830 in NC_017328


> AF447814|45|G45|18265904|AAL67377.1|Escherichia_coli_CFT073|-|32673..32975|-|-|insertion 
sequence protein
Length=100

 Score =  135 bits (496),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 83/92 (91%), Positives = 86/92 (94%), Gaps = 0/92 (0%)

Query  19   AGFRSSNSAILAHEPVNTFGIDRRHTIKFCLSAKQRPYPTITIRGQLSDNMVYTEKHIRI  78
            +GF   +  ILAH+PVNTFGIDRRHTIKF LSAKQRPYPTITIRGQLSDNMVYTEKHIRI
Sbjct  9    SGFSLKQQRILAHDPVNTFGIDRRHTIKFGLSAKQRPYPTITIRGQLSDNMVYTEKHIRI  68

Query  79   ISVTTAAAIHPVIGSSENDVQLRTRHPETTAD  110
            ISVTTAAAIHPVIGSSENDVQLRTRHPETTAD
Sbjct  69   ISVTTAAAIHPVIGSSENDVQLRTRHPETTAD  100