Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
hypothetical protein |
NC_008800 (Yersinia enterocolitica 8081) |
6e-82 |
100 |
|
transglycosylase |
NC_009708 (Yersinia pseudotuberculosis IP 31758) |
2e-79 |
94 |
|
Lytic transglycosylase catalytic |
NC_022268 (Serratia sp. ATCC 39006) |
3e-61 |
70 |
|
Lytic transglycosylase catalytic |
NC_017845 (Pectobacterium sp. SCC3193) |
2e-54 |
64 |
|
lytic transglycosylase |
NC_013421 (Pectobacterium wasabiae WPP163) |
2e-54 |
63 |
|
hypothetical protein |
NC_010102 (Salmonella enterica SGSC4150; SPB7) |
2e-51 |
66 |
|
hypothetical protein |
NC_021176 (Salmonella enterica Ty21a) |
2e-51 |
57 |
|
hypothetical protein |
NC_017445 (Erwinia sp. Ejp617) |
2e-50 |
65 |
|
hypothetical protein |
NC_014121 (Enterobacter cloacae ATCC 13047) |
3e-50 |
61 |
|
lytic transglycosylase |
NC_016816 (Pantoea ananatis LMG 5342) |
2e-48 |
66 |
|
hypothetical protein |
NC_003198 (Salmonella enterica CT18) |
3e-48 |
57 |
|
hypothetical protein |
NC_012125 (Salmonella enterica RKS4594) |
3e-48 |
57 |
|
hypothetical protein |
NC_004631 (Salmonella enterica Ty2) |
3e-48 |
57 |
|
putative soluble lytic transglycosylase |
NC_017554 (Pantoea ananatis PA13) |
4e-48 |
63 |
|
hypothetical protein |
NC_005126 (Photorhabdus luminescens TTO1) |
7e-48 |
56 |
|
hypothetical protein |
NC_016845 (Klebsiella pneumoniae HS11286) |
3e-47 |
65 |
|
hypothetical protein |
NC_022082 (Klebsiella pneumoniae JM45) |
3e-47 |
65 |
|
hypothetical protein |
NC_011993 (Escherichia coli LF82) |
1e-46 |
68 |
|
hypothetical protein |
NC_017634 (Escherichia coli NRG 857C) |
9e-47 |
68 |
|
lytic transglycosylase |
NC_010554 (Proteus mirabilis HI4320) |
2e-43 |
55 |
|
lytic transglycosylase |
NC_009832 (Serratia proteamaculans 568) |
4e-42 |
51 |
|
lytic transglycosylase |
NC_021818 (Salmonella enterica CFSAN002050) |
5e-42 |
66 |
|
hypothetical protein |
NC_004547 (Pectobacterium atrosepticum SCRI1043) |
9e-42 |
48 |
|
hypothetical protein |
NC_014029 (Yersinia pestis Z176003) |
1e-39 |
53 |
|
lytic transglycosylase |
NC_009832 (Serratia proteamaculans 568) |
2e-39 |
58 |
|
lytic transglycosylase |
NC_009832 (Serratia proteamaculans 568) |
2e-39 |
58 |
|
lytic transglycosylase catalytic subunit |
NC_015567 (Serratia plymuthica AS9) |
4e-39 |
58 |
|
lytic transglycosylase catalytic subunit |
NC_015566 (Serratia sp. AS12) |
4e-39 |
58 |
|
lytic transglycosylase |
NC_017573 (Serratia sp. AS13) |
4e-39 |
58 |
|
hypothetical protein |
NC_017641 (Escherichia coli UMNK88) |
6e-38 |
47 |
|
lytic transglycosylase, catalytic |
NC_014304 (Erwinia billingiae Eb661) |
5e-35 |
54 |
|
FIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
NC_020181 (Enterobacter aerogenes EA1509E) |
6e-35 |
51 |
|
hypothetical protein |
NC_010067 (Salmonella enterica RSK2980) |
6e-35 |
51 |
|
putative Lytic transglycosylase, catalytic |
NC_011745 (Escherichia coli ED1a) |
1e-34 |
46 |
|
hypothetical protein |
NC_012779 (Edwardsiella ictaluri 93-146) |
9e-34 |
53 |
|
putative lytic transglycosylase, catalytic |
NC_015460 (Gallibacterium anatis UMN179) |
2e-32 |
44 |
|
hypothetical protein |
NC_007005 (Pseudomonas syringae B728a) |
5e-25 |
45 |
|
lytic transglycosylase catalytic subunit |
NC_007492 (Pseudomonas fluorescens Pf0-1) |
4e-23 |
44 |
|
soluble lytic transglycosylase domain protein |
NC_021361 (Pseudomonas fluorescens A506) |
5e-23 |
43 |
|
hypothetical protein |
NC_010170 (Bordetella petrii DSM 12804) |
1e-22 |
41 |
|
lytic transglycosylase |
NC_010501 (Pseudomonas putida W619) |
3e-22 |
46 |
|
lytic transglycosylase catalytic subunit |
NC_009719 (Parvibaculum lavamentivorans DS-1) |
9e-22 |
44 |
|
FIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains |
NC_021285 (Achromobacter xylosoxidans NH44784-1996) |
9e-22 |
41 |
|
signal peptide |
NC_009138 (Herminiimonas arsenicoxydans ) |
9e-22 |
41 |
|
lytic transglycosylase |
NC_017549 (Pseudomonas aeruginosa NCGM2.S1) |
2e-21 |
43 |
|
hypothetical protein |
NC_017549 (Pseudomonas aeruginosa NCGM2.S1) |
2e-21 |
44 |
|
lytic transglycosylase precursor |
NC_007508 (Xanthomonas campestris 85-10) |
1e-20 |
42 |
|
lytic transglycosylase |
NC_010688 (Xanthomonas campestris B100) |
2e-20 |
41 |
|
lytic transglycosylase catalytic subunit |
NC_008782 (Acidovorax sp. JS42) |
2e-20 |
42 |
|
lytic transglycosylase catalytic subunit |
NC_008782 (Acidovorax sp. JS42) |
2e-20 |
42 |
|
putative signal peptide |
NC_012912 (Dickeya zeae Ech1591) |
3e-20 |
41 |
|
hypothetical protein |
NC_017580 (Shewanella baltica OS117) |
4e-20 |
44 |
|
lytic transglycosylase |
NC_021577 (Pseudomonas aeruginosa RP73) |
2e-19 |
45 |
|
hypothetical protein |
NC_008463 (Pseudomonas aeruginosa UCBPP-PA14) |
2e-19 |
44 |
|
hypothetical protein |
NC_018080 (Pseudomonas aeruginosa DK2) |
3e-19 |
45 |
|
soluble lytic murein transglycosylase |
NC_020912 (Pseudomonas aeruginosa B136-33) |
3e-19 |
44 |
|
soluble lytic murein transglycosylase |
NC_009656 (Pseudomonas aeruginosa PA7) |
3e-19 |
44 |
|
hypothetical protein |
NC_012660 (Pseudomonas fluorescens SBW25) |
5e-19 |
43 |
|
lytic transglycosylase, catalytic |
NC_008344 (Nitrosomonas eutropha C91) |
1e-18 |
44 |
|
FIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains |
NC_021285 (Achromobacter xylosoxidans NH44784-1996) |
7e-15 |
44 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_008800_P2' AND ph.id_pai_orf='44' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc