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Homologs of APECO1_3492 gene of NC_008563_P4

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) APECO1_3492
( YP_854319.1 )

transcriptional regulator

NC_008563
(Escherichia coli APEC O1)

3e-104

100

2) yfjR
( YP_002392916.1 )

HTH-type transcriptional regulator

NC_011742
(Escherichia coli S88)

4e-104

3) c5160
( NP_757008.1 )

transcriptional regulator YfjR

NC_004431
(Escherichia coli CFT073)

1e-103

4) ECP_4627
( YP_672464.1 )

hypothetical protein

NC_008253
(Escherichia coli 536)

6e-104

5) yfjR
( YP_002405744.1 )

HTH-type transcriptional regulator

NC_011748
(Escherichia coli 55989)

6e-104

6) EcE24377A_3405
( YP_001464401.1 )

hypothetical protein

NC_009801
(Escherichia coli E24377A)

6e-104

7) EcSMS35_3204
( YP_001745187.1 )

hypothetical protein

NC_010498
(Escherichia coli SMS-3-5)

6e-104

8) EcSMS35_4799
( YP_001746713.1 )

hypothetical protein

NC_010498
(Escherichia coli SMS-3-5)

6e-104

9) UM146_22155
( YP_006113267.1 )

putative HTH-type transcriptional regulator

NC_017632
(Escherichia coli UM146)

6e-104

10) UTI89_C4986
( YP_543920.1 )

hypothetical protein

NC_007946
(Escherichia coli UTI89)

6e-104

11) SN31241_6650
( YP_008358583.1 )

Transcriptional regulator

NC_021902
(Salmonella enterica USMARC-S3124.1)

6e-104

12) ECP_3851
( YP_671723.1 )

hypothetical protein

NC_008253
(Escherichia coli 536)

2e-103

13) c4566
( NP_756426.1 )

transcriptional regulator YfjR

NC_004431
(Escherichia coli CFT073)

1e-102

14) yfjR
( YP_006146260.1 )

HTH-type transcriptional regulator yfjR

NC_017646
(Escherichia coli CE10)

2e-102

15) yfjR
( YP_859749.1 )

transcriptional regulator

NC_008563
(Escherichia coli APEC O1)

3e-102

16) ECS88_4649
( YP_002394146.1 )

HTH-type transcriptional regulator yfjR

NC_011742
(Escherichia coli S88)

3e-102

17) ECABU_c49240
( YP_006108833.1 )

putative DNA-binding transcriptional regulator

NC_017631
(Escherichia coli ABU 83972)

1e-101

18) ETEC_3941
( YP_006117480.1 )

putative DNA-binding protein

NC_017633
(Escherichia coli ETEC H10407)

1e-101

19) EC042_3218
( YP_006097510.1 )

putative DNA-binding protein

NC_017626
(Escherichia coli 042)

4e-101

20) ECNA114_2128
( YP_006139233.1 )

putative transcriptional regulator

NC_017644
(Escherichia coli NA114)

1e-93

21) EAE_06610
( YP_004591525.1 )

hypothetical protein

NC_015663
(Enterobacter aerogenes KCTC 2190)

2e-50

22) ECABU_c41300
( YP_006108094.1 )

putative DNA-binding transcriptional regulator

NC_017631
(Escherichia coli ABU 83972)

3e-50

23) i14_4158
( YP_006156227.1 )

putative transcriptional regulator YfjR

NC_017652
(Escherichia coli clone D i14)

3e-50

24) i02_4158
( YP_006151308.1 )

putative transcriptional regulator YfjR

NC_017651
(Escherichia coli clone D i2)

3e-50

25) EKO11_4034
( YP_005279667.1 )

regulatory protein DeoR

NC_016902
(Escherichia coli KO11FL)

1e-49

26) KO11_23035
( YP_006166915.1 )

hypothetical protein

NC_017660
(Escherichia coli KO11FL)

1e-49

27) LY180_22465
( YP_008567494.1 )

transcriptional regulator

NC_022364
(Escherichia coli LY180)

1e-49

28) ECW_m4639
( YP_006127153.1 )

transcriptional regulator

NC_017635
(Escherichia coli W)

1e-49

29) WFL_22590
( YP_006175940.1 )

hypothetical protein

NC_017664
(Escherichia coli W)

1e-49

30) Pecwa_1387
( YP_003258794.1 )

DeoR family transcriptional regulator

NC_013421
(Pectobacterium wasabiae WPP163)

8e-48

31) PC1_2884
( YP_003018446.1 )

regulatory protein DeoR

NC_012917
(Pectobacterium carotovorum PC1)

1e-46

32) PCC21_032650
( YP_006647921.1 )

regulatory protein DeoR

NC_018525
(Pectobacterium carotovorum PCC21)

2e-46

33) CSSP291_04270
( YP_007439740.1 )

regulatory protein DeoR

NC_020260
(Cronobacter sakazakii Sp291)

1e-42

34) ECL_03709
( YP_003614192.1 )

regulatory protein DeoR

NC_014121
(Enterobacter cloacae ATCC 13047)

1e-42

35) ECSE_0290
( YP_002291565.1 )

hypothetical protein

NC_011415
(Escherichia coli SE11)

8e-41

36) SEEB0189_04890
( YP_008307331.1 )

transcriptional regulator

NC_021844
(Salmonella enterica CFSAN000189)

1e-40

37) KPK_4949
( YP_002240727.1 )

transcriptional regulator

NC_011283
(Klebsiella pneumoniae 342)

3e-40

38) KOX_02175
( YP_005016415.1 )

hypothetical protein

NC_016612
(Klebsiella oxytoca KCTC 1686)

3e-40

39) ECO103_5081
( YP_003224894.1 )

transcription repressor

NC_013353
(Escherichia coli 12009)

4e-39

40) Entcl_3838
( YP_003943362.1 )

regulatory protein DeoR

NC_014618
(Enterobacter cloacae SCF1)

1e-38

41) M621_19610
( YP_008160692.1 )

transcriptional regulator

NC_021659
(Serratia plymuthica S13)

6e-39

42) H650_18195
( YP_008109393.1 )

transcriptional regulator

NC_021500
(Enterobacter sp. R4-368)

2e-38

43) EcDH1_1041
( YP_006091006.1 )

putative transcriptional regulator

NC_017625
(Escherichia coli DH1)

1e-37

44) yfjR
( YP_006129954.1 )

CP4-57 prophage; putative DNA-binding transcriptional regulator

NC_017638
(Escherichia coli DH1)

1e-37

45) yfjR
( YP_001731554.1 )

CP4-57 prophage; DNA-binding transcriptional regulator

NC_010473
(Escherichia coli K-12)

1e-37

46) yfjR
( YP_002927588.1 )

CP4-57 prophage; putative DNA-binding transcriptional regulator

NC_012759
(Escherichia coli K-12)

1e-37

47) yfjR
( YP_490855.1 )

DNA-binding transcriptional regulator

NC_007779
(Escherichia coli K-12)

1e-37

48) yfjR
( NP_417123.1 )

CP4-57 prophage; predicted DNA-binding transcriptional regulator

NC_000913
(Escherichia coli K12)

1e-37

49) P12B_c0278
( YP_006167333.1 )

hypothetical protein

NC_017663
(Escherichia coli P12b)

2e-37

50) Entcl_0686
( YP_003940245.1 )

regulatory protein DeoR

NC_014618
(Enterobacter cloacae SCF1)

6e-35

51) CFSAN002050_05935
( YP_008259133.1 )

hypothetical protein

NC_021818
(Salmonella enterica CFSAN002050)

2e-30

• Sequence Alignments

1) APECO1_3492 in NC_008563


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  370 bits (1392),  Expect = 3e-104, Method: Compositional matrix adjust.
 Identities = 226/226 (100%), Positives = 226/226 (100%), Gaps = 0/226 (0%)

Query  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60
            MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120
            NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI
Sbjct  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120

Query  121  TATFPECFSQLILAIRQCIHISLMAERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180
            TATFPECFSQLILAIRQCIHISLMAERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA
Sbjct  121  TATFPECFSQLILAIRQCIHISLMAERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180

Query  181  DIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFNL  226
            DIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFNL
Sbjct  181  DIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFNL  226

2) yfjR in NC_011742


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  370 bits (1390),  Expect = 4e-104, Method: Compositional matrix adjust.
 Identities = 225/226 (99%), Positives = 226/226 (100%), Gaps = 0/226 (0%)

Query  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60
            MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120
            NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI
Sbjct  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120

Query  121  TATFPECFSQLILAIRQCIHISLMAERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180
            TATFPECFSQLILAIRQCIHISLMAERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA
Sbjct  121  TATFPECFSQLILAIRQCIHISLMAERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180

Query  181  DIKSVSLTSERFERRGHIHSLVAEERFISALPHFSFIHKLINTFNL  226
            DIKSVSLTSERFERRGHIH+LVAEERFISALPHFSFIHKLINTFNL
Sbjct  181  DIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFNL  226

3) c5160 in NC_004431


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  369 bits (1385),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 224/226 (99%), Positives = 225/226 (99%), Gaps = 0/226 (0%)

Query  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60
            MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120
            NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI
Sbjct  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120

Query  121  TATFPKCFSQLILAIRQCIHISLMAERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180
            TATFP CFSQLILAIRQCIHISLMAERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA
Sbjct  121  TATFPECFSQLILAIRQCIHISLMAERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180

Query  181  DIKSVSLTSERFERRGHIHSLVAEERFISALPHFSFIHKLINTFNL  226
            DIKSVSLTSERFERRGHIH+LVAEERFISALPHFSFIHKLINTFNL
Sbjct  181  DIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFNL  226

4) ECP_4627 in NC_008253


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  369 bits (1388),  Expect = 6e-104, Method: Compositional matrix adjust.
 Identities = 223/226 (99%), Positives = 226/226 (100%), Gaps = 0/226 (0%)

Query  1    MSDNRSRHDRLAVRLSLIISRLMAGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60
            MSDNRSRHDRLAVRLSLIISRLM+GESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120
            NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI
Sbjct  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120

Query  121  TATFPECFSQLILAIRQCIHISLMTERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180
            TATFPECFSQLILAIRQCIHISLM+ERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA
Sbjct  121  TATFPECFSQLILAIRQCIHISLMAERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180

Query  181  DIKSVSLTSERFERRGHIHSLVAEERFISALPHFSFIHKLINTFNL  226
            DIKSVSLTSERFERRGHIH+LVAEERFISALPHFSFIHKLINTFNL
Sbjct  181  DIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFNL  226

5) yfjR in NC_011748


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  369 bits (1388),  Expect = 6e-104, Method: Compositional matrix adjust.
 Identities = 223/226 (99%), Positives = 226/226 (100%), Gaps = 0/226 (0%)

Query  1    MSDNRSRHDRLAVRLSLIISRLMAGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60
            MSDNRSRHDRLAVRLSLIISRLM+GESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120
            NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI
Sbjct  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120

Query  121  TATFPECFSQLILAIRQCIHISLMTERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180
            TATFPECFSQLILAIRQCIHISLM+ERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA
Sbjct  121  TATFPECFSQLILAIRQCIHISLMAERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180

Query  181  DIKSVSLTSERFERRGHIHSLVAEERFISALPHFSFIHKLINTFNL  226
            DIKSVSLTSERFERRGHIH+LVAEERFISALPHFSFIHKLINTFNL
Sbjct  181  DIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFNL  226

6) EcE24377A_3405 in NC_009801


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  369 bits (1388),  Expect = 6e-104, Method: Compositional matrix adjust.
 Identities = 223/226 (99%), Positives = 226/226 (100%), Gaps = 0/226 (0%)

Query  1    MSDNRSRHDRLAVRLSLIISRLMAGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60
            MSDNRSRHDRLAVRLSLIISRLM+GESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120
            NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI
Sbjct  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120

Query  121  TATFPECFSQLILAIRQCIHISLMTERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180
            TATFPECFSQLILAIRQCIHISLM+ERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA
Sbjct  121  TATFPECFSQLILAIRQCIHISLMAERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180

Query  181  DIKSVSLTSERFERRGHIHSLVAEERFISALPHFSFIHKLINTFNL  226
            DIKSVSLTSERFERRGHIH+LVAEERFISALPHFSFIHKLINTFNL
Sbjct  181  DIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFNL  226

7) EcSMS35_3204 in NC_010498


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  369 bits (1388),  Expect = 6e-104, Method: Compositional matrix adjust.
 Identities = 223/226 (99%), Positives = 226/226 (100%), Gaps = 0/226 (0%)

Query  1    MSDNRSRHDRLAVRLSLIISRLMAGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60
            MSDNRSRHDRLAVRLSLIISRLM+GESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120
            NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI
Sbjct  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120

Query  121  TATFPECFSQLILAIRQCIHISLMTERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180
            TATFPECFSQLILAIRQCIHISLM+ERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA
Sbjct  121  TATFPECFSQLILAIRQCIHISLMAERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180

Query  181  DIKSVSLTSERFERRGHIHSLVAEERFISALPHFSFIHKLINTFNL  226
            DIKSVSLTSERFERRGHIH+LVAEERFISALPHFSFIHKLINTFNL
Sbjct  181  DIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFNL  226

8) EcSMS35_4799 in NC_010498


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  369 bits (1388),  Expect = 6e-104, Method: Compositional matrix adjust.
 Identities = 223/226 (99%), Positives = 226/226 (100%), Gaps = 0/226 (0%)

Query  1    MSDNRSRHDRLAVRLSLIISRLMAGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60
            MSDNRSRHDRLAVRLSLIISRLM+GESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120
            NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI
Sbjct  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120

Query  121  TATFPECFSQLILAIRQCIHISLMTERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180
            TATFPECFSQLILAIRQCIHISLM+ERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA
Sbjct  121  TATFPECFSQLILAIRQCIHISLMAERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180

Query  181  DIKSVSLTSERFERRGHIHSLVAEERFISALPHFSFIHKLINTFNL  226
            DIKSVSLTSERFERRGHIH+LVAEERFISALPHFSFIHKLINTFNL
Sbjct  181  DIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFNL  226

9) UM146_22155 in NC_017632


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  369 bits (1388),  Expect = 6e-104, Method: Compositional matrix adjust.
 Identities = 223/226 (99%), Positives = 226/226 (100%), Gaps = 0/226 (0%)

Query  1    MSDNRSRHDRLAVRLSLIISRLMAGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60
            MSDNRSRHDRLAVRLSLIISRLM+GESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120
            NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI
Sbjct  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120

Query  121  TATFPECFSQLILAIRQCIHISLMTERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180
            TATFPECFSQLILAIRQCIHISLM+ERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA
Sbjct  121  TATFPECFSQLILAIRQCIHISLMAERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180

Query  181  DIKSVSLTSERFERRGHIHSLVAEERFISALPHFSFIHKLINTFNL  226
            DIKSVSLTSERFERRGHIH+LVAEERFISALPHFSFIHKLINTFNL
Sbjct  181  DIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFNL  226

10) UTI89_C4986 in NC_007946


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  369 bits (1388),  Expect = 6e-104, Method: Compositional matrix adjust.
 Identities = 223/226 (99%), Positives = 226/226 (100%), Gaps = 0/226 (0%)

Query  1    MSDNRSRHDRLAVRLSLIISRLMAGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60
            MSDNRSRHDRLAVRLSLIISRLM+GESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120
            NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI
Sbjct  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120

Query  121  TATFPECFSQLILAIRQCIHISLMTERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180
            TATFPECFSQLILAIRQCIHISLM+ERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA
Sbjct  121  TATFPECFSQLILAIRQCIHISLMAERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180

Query  181  DIKSVSLTSERFERRGHIHSLVAEERFISALPHFSFIHKLINTFNL  226
            DIKSVSLTSERFERRGHIH+LVAEERFISALPHFSFIHKLINTFNL
Sbjct  181  DIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFNL  226

11) SN31241_6650 in NC_021902


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  369 bits (1388),  Expect = 6e-104, Method: Compositional matrix adjust.
 Identities = 223/226 (99%), Positives = 226/226 (100%), Gaps = 0/226 (0%)

Query  1    MSDNRSRHDRLAVRLSLIISRLMAGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60
            MSDNRSRHDRLAVRLSLIISRLM+GESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120
            NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI
Sbjct  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120

Query  121  TATFPECFSQLILAIRQCIHISLMTERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180
            TATFPECFSQLILAIRQCIHISLM+ERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA
Sbjct  121  TATFPECFSQLILAIRQCIHISLMAERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180

Query  181  DIKSVSLTSERFERRGHIHSLVAEERFISALPHFSFIHKLINTFNL  226
            DIKSVSLTSERFERRGHIH+LVAEERFISALPHFSFIHKLINTFNL
Sbjct  181  DIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFNL  226

12) ECP_3851 in NC_008253


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  367 bits (1381),  Expect = 2e-103, Method: Compositional matrix adjust.
 Identities = 222/226 (99%), Positives = 225/226 (99%), Gaps = 0/226 (0%)

Query  1    MSDNRSRHDRLAVRLSLIISRLMAGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60
            MSDNRSRHDRLAVRLSLIISRLM+GESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120
            NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI
Sbjct  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120

Query  121  TATFPECFSQLILAIRQCNHISLMTERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180
            TATFPECFSQLILAIRQC HISLM+ERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA
Sbjct  121  TATFPECFSQLILAIRQCIHISLMAERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180

Query  181  DIKSVSLTSERFERRGHIHSLVAEERFISALPHFSFIHKLINTFNL  226
            DIKSVSLTSERFERRGHIH+LVAEERFISALPHFSFIHKLINTFNL
Sbjct  181  DIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFNL  226

13) c4566 in NC_004431


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  365 bits (1373),  Expect = 1e-102, Method: Compositional matrix adjust.
 Identities = 221/226 (98%), Positives = 225/226 (99%), Gaps = 0/226 (0%)

Query  1    MSDDRSRHDRLAVRLSLIISRLMAGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60
            MSD+RSRHDRLAVRLSLIISRLM+GESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   NGRYSLRRQSSPCAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120
            NGRYSLRRQSSP AIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI
Sbjct  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120

Query  121  TATFPECFSQLILAIRQCIHISLMTERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180
            TATFPECFSQLILAIRQCIHISLM+ERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA
Sbjct  121  TATFPECFSQLILAIRQCIHISLMAERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180

Query  181  DIKSVSLTSERFERRGHIHSLVAEERFISALPHFSFIHKLINTFNL  226
            DIKSVSLTSERFERRGHIH+LVAEERFISALPHFSFIHKLINTFNL
Sbjct  181  DIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFNL  226

14) yfjR in NC_017646


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  364 bits (1369),  Expect = 2e-102, Method: Compositional matrix adjust.
 Identities = 221/226 (98%), Positives = 224/226 (99%), Gaps = 0/226 (0%)

Query  1    MSDDRSRHDRLAVRLSLIISRLMAGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60
            MSD+RSRHDRLAVRLSLIISRLM+GESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   NGRYSLRRQSSPCAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120
            NGRYSLRRQSSP AIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI
Sbjct  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120

Query  121  TATFPECFSQLILAIRQCIHISLMTERWYTSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180
            TATFPECFSQLILAIRQCIHISLM+ERWY SLEPCRLIYYSGSWYLIALQKGKLQVFPLA
Sbjct  121  TATFPECFSQLILAIRQCIHISLMAERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180

Query  181  DIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFNL  226
            DIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFNL
Sbjct  181  DIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFNL  226

15) yfjR in NC_008563


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  364 bits (1367),  Expect = 3e-102, Method: Compositional matrix adjust.
 Identities = 220/226 (98%), Positives = 224/226 (99%), Gaps = 0/226 (0%)

Query  1    MSDDRSRHDRLAVRLSLIISRLMAGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60
            MSD+RSRHDRLAVRLSLIISRLM+GESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   NGRYSLRRQSSPCAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120
            NGRYSLRRQSSP AIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI
Sbjct  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120

Query  121  TATFPECFSQLILAIKQCIHISLMTERWYTSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180
            TATFPECFSQLILAI+QCIHISLM+ERWY SLEPCRLIYYSGSWYLIALQKGKLQVFPLA
Sbjct  121  TATFPECFSQLILAIRQCIHISLMAERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180

Query  181  DIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFNL  226
            DIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFNL
Sbjct  181  DIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFNL  226

16) ECS88_4649 in NC_011742


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  364 bits (1367),  Expect = 3e-102, Method: Compositional matrix adjust.
 Identities = 220/226 (98%), Positives = 224/226 (99%), Gaps = 0/226 (0%)

Query  1    MSDDRSRHDRLAVRLSLIISRLMAGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60
            MSD+RSRHDRLAVRLSLIISRLM+GESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   NGRYSLRRQSSPCAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120
            NGRYSLRRQSSP AIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI
Sbjct  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120

Query  121  TATFPECFSQLILAIKQCIHISLMTERWYTSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180
            TATFPECFSQLILAI+QCIHISLM+ERWY SLEPCRLIYYSGSWYLIALQKGKLQVFPLA
Sbjct  121  TATFPECFSQLILAIRQCIHISLMAERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180

Query  181  DIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFNL  226
            DIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFNL
Sbjct  181  DIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFNL  226

17) ECABU_c49240 in NC_017631


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  362 bits (1360),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 217/226 (97%), Positives = 226/226 (100%), Gaps = 0/226 (0%)

Query  1    MSDNRSRHDRLAVRLSLIISRLMAGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60
            MSDNRSRHDRLAVRLSLIISRLM+GESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   NGRYSLRRQSNPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120
            NGRYSLRRQS+PGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI
Sbjct  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120

Query  121  TATLPECFSQLILAIRQCIHISLVTERWYPSLEPCRLIYYSGSWYLIALQKGKLRVFPLA  180
            TAT+PECFSQLILAIRQCIHISL++ERWYPSLEPCRLIYYSGSWYLIALQKGKL+VFPLA
Sbjct  121  TATFPECFSQLILAIRQCIHISLMAERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180

Query  181  DIKSVSLTSERFERRDHIHSLVAEERFISALPHFPFIHKLINTFNL  226
            DIKSVSLTSERFERR+HIH+LVAEERFISALPHF+FIHKLINTFNL
Sbjct  181  DIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFNL  226

18) ETEC_3941 in NC_017633


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  361 bits (1358),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 216/226 (96%), Positives = 226/226 (100%), Gaps = 0/226 (0%)

Query  1    MSDNRSRHDRLAVRLSLIISRLMAGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60
            MSDNRSRHDRLAVRLSLIISRLM+GESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   NGRYNLRRQSNPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120
            NGRY+LRRQS+PGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI
Sbjct  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120

Query  121  TATLPECFSQLILAIRQCIHISLVTERWYPSLEPCRLIYYSGSWYLIALQKGKLRVFPLA  180
            TAT+PECFSQLILAIRQCIHISL++ERWYPSLEPCRLIYYSGSWYLIALQKGKL+VFPLA
Sbjct  121  TATFPECFSQLILAIRQCIHISLMAERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180

Query  181  DIKSVSLTSERFERRDHIHSLVAEERFISALPHFPFIHKLINTFNL  226
            DIKSVSLTSERFERR+HIH+LVAEERFISALPHF+FIHKLINTFNL
Sbjct  181  DIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFNL  226

19) EC042_3218 in NC_017626


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  360 bits (1352),  Expect = 4e-101, Method: Compositional matrix adjust.
 Identities = 220/226 (98%), Positives = 224/226 (99%), Gaps = 0/226 (0%)

Query  1    MSDDRSRHDRLAVRLSLIISRLMAGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60
            MSD+RSRHDRLAVRLSLIISRLM+GESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   NGRYSLRRQSSPCAIPEMLSFIQNTGIARILPLRNGRLITFLTDNQEPSPCLIWLPAPDI  120
            NGRYSLRRQSSP AIPEMLSFIQNTGIARILPLRNGRLIT LTDNQEPSPCLIWLPAPDI
Sbjct  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120

Query  121  TATFPECFSQLILAIRQCIHISLMTERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180
            TATFPECFSQLILAIRQCIHISLM+ERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA
Sbjct  121  TATFPECFSQLILAIRQCIHISLMAERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180

Query  181  DIKSVSLTSERFERRGHIHSLVAEERFISALPHFSFIHKLINTFNL  226
            DIKSVSLTSERFERRGHIH+LVAEERFISALPHFSFIHKLINTFNL
Sbjct  181  DIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFNL  226

20) ECNA114_2128 in NC_017644


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  335 bits (1257),  Expect = 1e-93, Method: Compositional matrix adjust.
 Identities = 209/226 (93%), Positives = 213/226 (95%), Gaps = 13/226 (5%)

Query  1    MSDNRSRHDRLAVRLSLIISRLMAGESLSLKTLSDEFGVTERTLQRDFHQH---------  51
            MSDNRSRHDRLAVRLSLIISRLM+GESLSLKTLSDEFGVTERTLQRDFHQ+         
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  52   ----SLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  107
                SLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI
Sbjct  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120

Query  108  TATFPECFSQLILAIRQCIHISLMTERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  167
            TATFPECFSQLILAIRQCIHISLM+ERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA
Sbjct  121  TATFPECFSQLILAIRQCIHISLMAERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPLA  180

Query  168  DIKSVSLTSERFERRGHIHSLVAEERFISALPHFSFIHKLINTFNL  213
            DIKSVSLTSERFERRGHIH+LVAEERFISALPHFSFIHKLINTFNL
Sbjct  181  DIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFNL  226

21) EAE_06610 in NC_015663


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  192 bits (712),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 112/225 (50%), Positives = 165/225 (74%), Gaps = 1/225 (0%)

Query  3    VNEQDSRYDRLAIRLSVIISRLLAGETLSLKSLVDEFGVSERTLQRDFNQRLIHLDILDE  62
            ++++ SR DRLA+RLS+IISRL++GE+LSLK+L DEFGV+ERTLQRDF+QRL+HLD+   
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  63   NGRYRLNDCQPPDHSSGAFSFIRTTGIARIIPVQDRQLMNLLMNESGTSPCLIWHAPLKS  122
            NGRY L    +P+  +  +SFI+ TGIARI+P+++ +L+  L ++   SPCLIW ++   
Sbjct  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120

Query  123  HVALPEFFSRLVQAISQKRQITVLVEGQRHEALEPYRLIHYVEEWYLVVCQSGKIRVFAL  182
              ++PE FS+L+ AI Q  +I+++ E ++  +LEP RLI Y   WYL+  Q GK++VF+L
Sbjct  121  TATFPECFSQLILAIRQCIHISLMAE-RWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPL  179

Query  183  TSIGAVTLDEVRFKRREDISYLTAGEGFIAALPHFPLISDVIDTF  227
            + I +V+L   RF RR +I  L A E FI+ALPHF++I  +I+TF
Sbjct  180  ADIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTF  224

22) ECABU_c41300 in NC_017631


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  191 bits (709),  Expect = 3e-50, Method: Compositional matrix adjust.
 Identities = 107/225 (48%), Positives = 160/225 (72%), Gaps = 1/225 (0%)

Query  1    MKTQHDHHDRLSVRLSVIISRLLAGESLELKVLADEFGVSERTLQRDFQQRLIHLDLEHR  60
            M  ++ +HDRL+VRLS+IISRL++GESL LK L+DEFGV+ERTLQRDF+QRL+HLDLE R
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   SGSYRLIRQTGREHLPNTFAFIRNSGISGIIPAQNRKLIRLIASNSGVSPCLIGHGALSS  120
            +G Y L RQ++   +P+ ++FI+N+GI+ I+P +N +LI  ++ N   SPCLI   A   
Sbjct  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120

Query  121  PVTQTACFLKLAEAIRDYRAVTLLVNGKSYEAVAPRRLIFQSKNWFLVATRTRNLQVFRM  180
              T   CF +L  AIR+   ++L+ + + Y ++ P RLI+ S +W+L+A +  +LQVF +
Sbjct  121  TATFPECFSQLILAIRQCIHISLMAE-RWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPL  179

Query  181  EDVNAVTVLDTSFRRKPELDALTASEEFISALPHFRFISDVIQTF  225
             D+++V++    F R+ +++ L A E FISALPHF FI  +I+TF
Sbjct  180  ADIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTF  224

23) i14_4158 in NC_017652


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  191 bits (709),  Expect = 3e-50, Method: Compositional matrix adjust.
 Identities = 107/225 (48%), Positives = 160/225 (72%), Gaps = 1/225 (0%)

Query  1    MKTQHDHHDRLSVRLSVIISRLLAGESLELKVLADEFGVSERTLQRDFQQRLIHLDLEHR  60
            M  ++ +HDRL+VRLS+IISRL++GESL LK L+DEFGV+ERTLQRDF+QRL+HLDLE R
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   SGSYRLIRQTGREHLPNTFAFIRNSGISGIIPAQNRKLIRLIASNSGVSPCLIGHGALSS  120
            +G Y L RQ++   +P+ ++FI+N+GI+ I+P +N +LI  ++ N   SPCLI   A   
Sbjct  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120

Query  121  PVTQTACFLKLAEAIRDYRAVTLLVNGKSYEAVAPRRLIFQSKNWFLVATRTRNLQVFRM  180
              T   CF +L  AIR+   ++L+ + + Y ++ P RLI+ S +W+L+A +  +LQVF +
Sbjct  121  TATFPECFSQLILAIRQCIHISLMAE-RWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPL  179

Query  181  EDVNAVTVLDTSFRRKPELDALTASEEFISALPHFRFISDVIQTF  225
             D+++V++    F R+ +++ L A E FISALPHF FI  +I+TF
Sbjct  180  ADIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTF  224

24) i02_4158 in NC_017651


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  191 bits (709),  Expect = 3e-50, Method: Compositional matrix adjust.
 Identities = 107/225 (48%), Positives = 160/225 (72%), Gaps = 1/225 (0%)

Query  1    MKTQHDHHDRLSVRLSVIISRLLAGESLELKVLADEFGVSERTLQRDFQQRLIHLDLEHR  60
            M  ++ +HDRL+VRLS+IISRL++GESL LK L+DEFGV+ERTLQRDF+QRL+HLDLE R
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   SGSYRLIRQTGREHLPNTFAFIRNSGISGIIPAQNRKLIRLIASNSGVSPCLIGHGALSS  120
            +G Y L RQ++   +P+ ++FI+N+GI+ I+P +N +LI  ++ N   SPCLI   A   
Sbjct  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120

Query  121  PVTQTACFLKLAEAIRDYRAVTLLVNGKSYEAVAPRRLIFQSKNWFLVATRTRNLQVFRM  180
              T   CF +L  AIR+   ++L+ + + Y ++ P RLI+ S +W+L+A +  +LQVF +
Sbjct  121  TATFPECFSQLILAIRQCIHISLMAE-RWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPL  179

Query  181  EDVNAVTVLDTSFRRKPELDALTASEEFISALPHFRFISDVIQTF  225
             D+++V++    F R+ +++ L A E FISALPHF FI  +I+TF
Sbjct  180  ADIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTF  224

25) KO11_23035 in NC_017660


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  189 bits (701),  Expect = 1e-49, Method: Compositional matrix adjust.
 Identities = 107/225 (48%), Positives = 159/225 (71%), Gaps = 1/225 (0%)

Query  1    MKTQHDYHDRLSVRLSVIISRLLAGESLELKVLADEFGVSERTLQRDFQQRLIHLDLEHR  60
            M  ++  HDRL+VRLS+IISRL++GESL LK L+DEFGV+ERTLQRDF+QRL+HLDLE R
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   SGSYRLIRQTGREHLPNTFAFIRNSGISGIIPAQNRKLIRLIASNSGVSPCLIGHGALSS  120
            +G Y L RQ++   +P+ ++FI+N+GI+ I+P +N +LI  ++ N   SPCLI   A   
Sbjct  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120

Query  121  PVTQTACFLELAEAIRDYRAVTLLVNGKSYEAVAPRRLIFQSKNWFLVATRTRNLQVFRM  180
              T   CF +L  AIR+   ++L+ + + Y ++ P RLI+ S +W+L+A +  +LQVF +
Sbjct  121  TATFPECFSQLILAIRQCIHISLMAE-RWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPL  179

Query  181  EDVNAVTVLDTSFRRKPELDALTASEEFISALPHFRFISDVIQTF  225
             D+++V++    F R+ +++ L A E FISALPHF FI  +I+TF
Sbjct  180  ADIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTF  224

26) EKO11_4034 in NC_016902


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  189 bits (701),  Expect = 1e-49, Method: Compositional matrix adjust.
 Identities = 107/225 (48%), Positives = 159/225 (71%), Gaps = 1/225 (0%)

Query  1    MKTQHDYHDRLSVRLSVIISRLLAGESLELKVLADEFGVSERTLQRDFQQRLIHLDLEHR  60
            M  ++  HDRL+VRLS+IISRL++GESL LK L+DEFGV+ERTLQRDF+QRL+HLDLE R
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   SGSYRLIRQTGREHLPNTFAFIRNSGISGIIPAQNRKLIRLIASNSGVSPCLIGHGALSS  120
            +G Y L RQ++   +P+ ++FI+N+GI+ I+P +N +LI  ++ N   SPCLI   A   
Sbjct  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120

Query  121  PVTQTACFLELAEAIRDYRAVTLLVNGKSYEAVAPRRLIFQSKNWFLVATRTRNLQVFRM  180
              T   CF +L  AIR+   ++L+ + + Y ++ P RLI+ S +W+L+A +  +LQVF +
Sbjct  121  TATFPECFSQLILAIRQCIHISLMAE-RWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPL  179

Query  181  EDVNAVTVLDTSFRRKPELDALTASEEFISALPHFRFISDVIQTF  225
             D+++V++    F R+ +++ L A E FISALPHF FI  +I+TF
Sbjct  180  ADIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTF  224

27) LY180_22465 in NC_022364


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  189 bits (701),  Expect = 1e-49, Method: Compositional matrix adjust.
 Identities = 107/225 (48%), Positives = 159/225 (71%), Gaps = 1/225 (0%)

Query  1    MKTQHDYHDRLSVRLSVIISRLLAGESLELKVLADEFGVSERTLQRDFQQRLIHLDLEHR  60
            M  ++  HDRL+VRLS+IISRL++GESL LK L+DEFGV+ERTLQRDF+QRL+HLDLE R
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   SGSYRLIRQTGREHLPNTFAFIRNSGISGIIPAQNRKLIRLIASNSGVSPCLIGHGALSS  120
            +G Y L RQ++   +P+ ++FI+N+GI+ I+P +N +LI  ++ N   SPCLI   A   
Sbjct  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120

Query  121  PVTQTACFLELAEAIRDYRAVTLLVNGKSYEAVAPRRLIFQSKNWFLVATRTRNLQVFRM  180
              T   CF +L  AIR+   ++L+ + + Y ++ P RLI+ S +W+L+A +  +LQVF +
Sbjct  121  TATFPECFSQLILAIRQCIHISLMAE-RWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPL  179

Query  181  EDVNAVTVLDTSFRRKPELDALTASEEFISALPHFRFISDVIQTF  225
             D+++V++    F R+ +++ L A E FISALPHF FI  +I+TF
Sbjct  180  ADIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTF  224

28) ECW_m4639 in NC_017635


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  189 bits (701),  Expect = 1e-49, Method: Compositional matrix adjust.
 Identities = 107/225 (48%), Positives = 159/225 (71%), Gaps = 1/225 (0%)

Query  1    MKTQHDYHDRLSVRLSVIISRLLAGESLELKVLADEFGVSERTLQRDFQQRLIHLDLEHR  60
            M  ++  HDRL+VRLS+IISRL++GESL LK L+DEFGV+ERTLQRDF+QRL+HLDLE R
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   SGSYRLIRQTGREHLPNTFAFIRNSGISGIIPAQNRKLIRLIASNSGVSPCLIGHGALSS  120
            +G Y L RQ++   +P+ ++FI+N+GI+ I+P +N +LI  ++ N   SPCLI   A   
Sbjct  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120

Query  121  PVTQTACFLELAEAIRDYRAVTLLVNGKSYEAVAPRRLIFQSKNWFLVATRTRNLQVFRM  180
              T   CF +L  AIR+   ++L+ + + Y ++ P RLI+ S +W+L+A +  +LQVF +
Sbjct  121  TATFPECFSQLILAIRQCIHISLMAE-RWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPL  179

Query  181  EDVNAVTVLDTSFRRKPELDALTASEEFISALPHFRFISDVIQTF  225
             D+++V++    F R+ +++ L A E FISALPHF FI  +I+TF
Sbjct  180  ADIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTF  224

29) WFL_22590 in NC_017664


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  189 bits (701),  Expect = 1e-49, Method: Compositional matrix adjust.
 Identities = 107/225 (48%), Positives = 159/225 (71%), Gaps = 1/225 (0%)

Query  1    MKTQHDYHDRLSVRLSVIISRLLAGESLELKVLADEFGVSERTLQRDFQQRLIHLDLEHR  60
            M  ++  HDRL+VRLS+IISRL++GESL LK L+DEFGV+ERTLQRDF+QRL+HLDLE R
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   SGSYRLIRQTGREHLPNTFAFIRNSGISGIIPAQNRKLIRLIASNSGVSPCLIGHGALSS  120
            +G Y L RQ++   +P+ ++FI+N+GI+ I+P +N +LI  ++ N   SPCLI   A   
Sbjct  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120

Query  121  PVTQTACFLELAEAIRDYRAVTLLVNGKSYEAVAPRRLIFQSKNWFLVATRTRNLQVFRM  180
              T   CF +L  AIR+   ++L+ + + Y ++ P RLI+ S +W+L+A +  +LQVF +
Sbjct  121  TATFPECFSQLILAIRQCIHISLMAE-RWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPL  179

Query  181  EDVNAVTVLDTSFRRKPELDALTASEEFISALPHFRFISDVIQTF  225
             D+++V++    F R+ +++ L A E FISALPHF FI  +I+TF
Sbjct  180  ADIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTF  224

30) Pecwa_1387 in NC_013421


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  183 bits (678),  Expect = 8e-48, Method: Compositional matrix adjust.
 Identities = 102/227 (45%), Positives = 163/227 (72%), Gaps = 2/227 (0%)

Query  1    MTQADRRYDRLAVRLSLIISRLLAGETLSVRKLAAEFGVSARTLRRDFRERLMYLDLEYR  60
            M++   R DRLAVRLSLIISRL++GE+LS++ L+ EFGV+ RTL+RDF++RL+ LDLEYR
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   NGLCRLPEHHNPARHGQDVLMFVRQTGMENVFPGLDNRLVNTLLDSGEDAPCLVWHPPQR  120
            NG   L  + +P+    ++L F+++TG+  ++P  + RL+  L D+ E +PCL+W P+  
Sbjct  61   NGRYSLRRQSSPG-AIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPD  119

Query  121  GTPTLPGHFYRLTRAIGEQLRVTVLADGQRYDGLSPYRLICLYGEWYLVAESLGHLLVLP  180
             T+T+P  F +L  AI + ++++++A+ ++Y +L P RLI   G WYL+A   G L V+P
Sbjct  120  ITATFPECFSQLILAIRQCIHISLMAE-RWYPSLEPCRLIYYSGSWYLIALQKGKLQVFP  178

Query  181  LHEIHGVTVSTESFQRRDDICHLTTQSGFITALPHFRFIHDVLTTFG  227
            L +I +V++++E F+RR++I +L ++  FI+ALPHF FIH ++ TF 
Sbjct  179  LADIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFN  225

31) PC1_2884 in NC_012917


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  179 bits (662),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 102/227 (45%), Positives = 163/227 (72%), Gaps = 2/227 (0%)

Query  1    MTQADRRYDRLAVRLSLIISRLLAGETLSVRKLAAEFGVSTRTLRRDFRERLMYLDLEYR  60
            M++   R DRLAVRLSLIISRL++GE+LS++ L+ EFGV+ RTL+RDF++RL+ LDLEYR
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   NGLCRLPEHHNPARHEQDVLMFARQTGVGVFFPGLDNRLVNTLLDSGEDAPCLVWHPPLR  120
            NG   L  + +P+    ++L F ++TG++ ++P  + RL+  L D+ E +PCL+W P+  
Sbjct  61   NGRYSLRRQSSPG-AIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPD  119

Query  121  GTPTLPGHFYRLTRAIGEQLRVTVLADGQRYDGLSPYRLICLYGEWYLVAESLGHLLVLP  180
             T+T+P  F +L  AI + ++++++A+ ++Y +L P RLI   G WYL+A   G L V+P
Sbjct  120  ITATFPECFSQLILAIRQCIHISLMAE-RWYPSLEPCRLIYYSGSWYLIALQKGKLQVFP  178

Query  181  LHEIHGVTVSTESFQRRDDICHLTTQSGFITALPHFRFIHDVLTTFG  227
            L +I +V++++E F+RR++I +L ++  FI+ALPHF FIH ++ TF 
Sbjct  179  LADIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFN  225

32) PCC21_032650 in NC_018525


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  178 bits (661),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 102/227 (45%), Positives = 163/227 (72%), Gaps = 2/227 (0%)

Query  1    MTQADRRYDRLAVRLSLIISRLLAGETLSVRKLATEFGVSTRTLRRDFRERLMYLDLEYR  60
            M++   R DRLAVRLSLIISRL++GE+LS++ L+ EFGV+ RTL+RDF++RL+ LDLEYR
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   NGLCRLPEHHNPARHEQDVLMFARQTGVGVFFPGLDNRLVNTLLDSGEDAPCLVWHPPLR  120
            NG   L  + +P+    ++L F ++TG++ ++P  + RL+  L D+ E +PCL+W P+  
Sbjct  61   NGRYSLRRQSSPG-AIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPD  119

Query  121  GTPTLPGHFYRLTRAIGEQLRVTVLADSQRYDGLSPYRLICLYGEWYLVAESLGHLLVLP  180
             T+T+P  F +L  AI + ++++++A+ ++Y +L P RLI   G WYL+A   G L V+P
Sbjct  120  ITATFPECFSQLILAIRQCIHISLMAE-RWYPSLEPCRLIYYSGSWYLIALQKGKLQVFP  178

Query  181  LHEIHGVTVSTESFQRRDDICHLTTQSGFITALPHFRFIHDVLTTFG  227
            L +I +V++++E F+RR++I +L ++  FI+ALPHF FIH ++ TF 
Sbjct  179  LADIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFN  225

33) CSSP291_04270 in NC_020260


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  166 bits (613),  Expect = 1e-42, Method: Compositional matrix adjust.
 Identities = 96/226 (43%), Positives = 159/226 (71%), Gaps = 4/226 (1%)

Query  1    MSQTEHRYDRLAVRLSLIISRLLAGETLSVKTLAVEFGVSVRTLRRDFRERLIYLNLEYR  60
            MS+   R DRLAVRLSLIISRL++GE+LS+KTL+ EFGV+ RTL+RDF++RL+ L+LEYR
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   HGHCRLLSDPGMAQRAPGTLCFMRNVGLQQVFPETDLRLVNTLTDSEDISSCLVWQEDAE  120
            +G+  L  +++ +   P  L F++N G+ +++P  + RL+  LTD+++ S+CL+W   ++
Sbjct  61   NGRYSLRRQSSPGA-IPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPD  119

Query  121  SAPVRPGLFSRLVDTIIQQQCIR-ELADGVRAEHLAPYRLIFLEGALYLVGEQHGRIVVL  179
             ++  P  FS+L+ +I  +QCI+  L    +   L P RLI+  G+ YL++ Q G++ V+
Sbjct  120  ITATFPECFSQLILAI--RQCIHISLMAERWYPSLEPCRLIYYSGSWYLIALQKGKLQVF  177

Query  180  PLSGITAITVLSEGFERRDTVCQLTRQVAFIRALPHFPVMHDVMAA  225
            PL++I ++++ SE FERR+ + +L  +  FI ALPHF+ +H ++ +
Sbjct  178  PLADIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINT  223

34) ECL_03709 in NC_014121


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  166 bits (613),  Expect = 1e-42, Method: Compositional matrix adjust.
 Identities = 96/226 (43%), Positives = 159/226 (71%), Gaps = 4/226 (1%)

Query  1    MSQTEHRYDRLAVRLSLIISRLLAGETLSVKTLAVEFGVSVRTLRRDFRERLIYLNLEYR  60
            MS+   R DRLAVRLSLIISRL++GE+LS+KTL+ EFGV+ RTL+RDF++RL+ L+LEYR
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   HGHCRLLSDPGMAQRAPGTLCFMRNVGLQQVFPETDLRLVNTLTDSEDISSCLVWQEDAE  120
            +G+  L  +++ +   P  L F++N G+ +++P  + RL+  LTD+++ S+CL+W   ++
Sbjct  61   NGRYSLRRQSSPGA-IPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPD  119

Query  121  SAPVRPGLFSRLVDTIIQQQCIR-ELADGVRAEHLAPYRLIFLEGALYLVGEQHGRIVVL  179
             ++  P  FS+L+ +I  +QCI+  L    +   L P RLI+  G+ YL++ Q G++ V+
Sbjct  120  ITATFPECFSQLILAI--RQCIHISLMAERWYPSLEPCRLIYYSGSWYLIALQKGKLQVF  177

Query  180  PLSGITAITVLSEGFERRDTVCQLTRQVAFIRALPHFPVMHDVMAA  225
            PL++I ++++ SE FERR+ + +L  +  FI ALPHF+ +H ++ +
Sbjct  178  PLADIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINT  223

35) ECSE_0290 in NC_011415


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  160 bits (589),  Expect = 8e-41, Method: Compositional matrix adjust.
 Identities = 90/223 (41%), Positives = 149/223 (67%), Gaps = 2/223 (0%)

Query  1    MSQTERRHERLAVRLSLIISRLVAGETLDMGLLAAEFGVSIRTLRRDFRERLMYLDLEYR  60
            MS+   RH+RLAVRLSLIISRL++GE+L +  L+ EFGV+ RTL+RDF++RL+ LDLEYR
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   DGTCRLLSGSHQRELA-VLTFARQSGVEALFPDMDNHMVSSLLSGPGESPCLIWAESESL  119
            +G   L   S    ++ +L+F +++G+  ++P  + ++++ L      SPCLIW  +  +
Sbjct  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120

Query  120  SPPRPGIFTRLVRAISERRRVTLLAEGCRCSRLAPYRLVLCGGHWYLTGEHHHRVAVFPL  179
            ++  P  F++L+ AI +  +++L+AE  + + L P RL+  +G WYL + +  ++ VFPL
Sbjct  121  TATFPECFSQLILAIRQCIHISLMAER-WYPSLEPCRLIYYSGSWYLIALQKGKLQVFPL  179

Query  180  NDIHAVTLHPELFVPNLQIRNVLTEPEFLRALPHFHVFHSLLA  222
             DI +V+L +E F    +I+N+++E  F+ ALPHF  +H L+ 
Sbjct  180  ADIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLIN  222

36) SEEB0189_04890 in NC_021844


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  159 bits (587),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 92/223 (42%), Positives = 149/223 (67%), Gaps = 2/223 (0%)

Query  1    MSQTERRHERLAVRLSLIISRLVAGETLDMGLLAAEFGVSLRTLRRDFRERLMYLDLEYR  60
            MS+   RH+RLAVRLSLIISRL++GE+L +  L+ EFGV+ RTL+RDF++RL+ LDLEYR
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   NGTCRLLSGSHQRELT-VLTFVRQSGVEALFPDMDNHMASSLLSGPGESPCLIWAESESL  119
            NG   L   S    +  +L+F++++G+  ++P  + ++ + L      SPCLIW  +  +
Sbjct  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120

Query  120  SPPRPGIFTRLVRAISEHRRVTLLAEGCRCSGLAPYRLVLCGGHWYLTGEHHHRVAVFPL  179
            ++  P  F++L+ AI +  +++L+AE  + ++L P RL+  +G WYL + +  ++ VFPL
Sbjct  121  TATFPECFSQLILAIRQCIHISLMAER-WYPSLEPCRLIYYSGSWYLIALQKGKLQVFPL  179

Query  180  NDIHAVTLHPELFVPDLQIRNVLAEPEFLRALPHFHVFHSLLA  222
             DI +V+L +E F    +I+N++AE  F+ ALPHF  +H L+ 
Sbjct  180  ADIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLIN  222

37) KPK_4949 in NC_011283


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  157 bits (581),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 96/227 (43%), Positives = 154/227 (68%), Gaps = 3/227 (1%)

Query  1    MTLQERRHDRLAVRLSLIISRLVSGETLFIRKLATEFGVSERTLRRDFRERLMYLDLDYY  60
            M+ +  RHDRLAVRLSLIISRL++GE+L ++ L+ EFGV+ERTL+RDF++RL+ LDL+Y 
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   QGQCSLRSDIHSTRQEIDILTFAHRTGLAGVFPGFDRRLISSLLDCDD-RPCLVWHQDRP  119
            +G+ SLR +  +     ++L+F + TG+A ++P  + RLI+ L D ++  PCL+W     
Sbjct  61   NGRYSLRRQSSPGAIP-EMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPD  119

Query  120  HPPAGKLCFYRLVRAISGCQRITVLTEGERHEAIAPYRLIALDGYWYLVAEHNRQLRVFR  179
              ++   CF +L+ AI  C +I++++E  +  ++ P RLI   G WYL+A ++ +L+VF 
Sbjct  120  ITATFPECFSQLILAIRQCIHISLMAE-RWYPSLEPCRLIYYSGSWYLIALQKGKLQVFP  178

Query  180  LDEIHLVRPSRETFIRSELLYQLSEDKHFISALPHFRFIQQSLNSFS  226
            L +I  V  + E F R   + +L  + +FISALPHF FI++ +N+F+
Sbjct  179  LADIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFN  225

38) KOX_02175 in NC_016612


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  157 bits (581),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 90/223 (41%), Positives = 150/223 (68%), Gaps = 2/223 (0%)

Query  1    MSQTERRHERLAVRLSLIISRLVAGETLDMGLLAAEFGVSLRTLRRDFRERLMYLDLEYR  60
            MS+   RH+RLAVRLSLIISRL++GE+L +  L+ EFGV+ RTL+RDF++RL+ LDLEYR
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   DGTCRLLSGSHQRELA-VLTFARQSGVEALFPDMDNHMVSSLLSGPGESPCLIWAESESL  119
            +G   L   S    ++ +L+F +++G+  ++P  + ++++ L      SPCLIW  +  +
Sbjct  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120

Query  120  SPPRPGIFTRLVRAISEHRRVTLLAEGCRCSGLAPYRLVLCGGHWYLTGEHHHRVAVFPL  179
            ++  P  F++L+ AI +  +++L+AE  + ++L P RL+  +G WYL + +  ++ VFPL
Sbjct  121  TATFPECFSQLILAIRQCIHISLMAER-WYPSLEPCRLIYYSGSWYLIALQKGKLQVFPL  179

Query  180  NDIHAVTLHPELFVPDLQIRNVLAEPELLRALPHFHVFHSLLA  222
             DI +V+L +E F    +I+N++AE  ++ ALPHF  +H L+ 
Sbjct  180  ADIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLIN  222

39) ECO103_5081 in NC_013353


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  154 bits (568),  Expect = 4e-39, Method: Compositional matrix adjust.
 Identities = 94/227 (42%), Positives = 154/227 (68%), Gaps = 3/227 (1%)

Query  1    MTLQERRHDRLAVRLSLIISRLVSGETLFIRKLATEFGVSERTLRRDFRERLMYLDLDYY  60
            M+ +  RHDRLAVRLSLIISRL++GE+L ++ L+ EFGV+ERTL+RDF++RL+ LDL+Y 
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   QGQCSLRTDIHSTRQEIDILTFAHRTGLAGVFPGFDRRLVSSLLDCDD-RPCLVWHQDRP  119
            +G+ SLR +  +     ++L+F + TG+A ++P  + RL++ L D ++  PCL+W     
Sbjct  61   NGRYSLRRQSSPGAIP-EMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPD  119

Query  120  HPPAGKLSFYRLVRAISGCQRITILTEGERHEAVAPYRLIALDGYWYLVAEHNRQLRVFR  179
              ++    F +L+ AI  C +I++++E  +  ++ P RLI   G WYL+A ++ +L+VF 
Sbjct  120  ITATFPECFSQLILAIRQCIHISLMAE-RWYPSLEPCRLIYYSGSWYLIALQKGKLQVFP  178

Query  180  LGEIHLVRPSRETFIRSELLYQLSEDKHFISALPHFRFIQQSLNSFS  226
            L++I  V  + E F R   + +L  + +FISALPHF FI++ +N+F+
Sbjct  179  LADIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFN  225

40) Entcl_3838 in NC_014618


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  153 bits (563),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 94/226 (42%), Positives = 149/226 (66%), Gaps = 7/226 (3%)

Query  1    MTQADRRHDRLAVRLSLIISRLVAGETLNMARLAAEFGVSVRTLRRDFRERLMYLDLEYR  60
            M++   RHDRLAVRLSLIISRL++GE+L++  L+ EFGV+ RTL+RDF++RL+ LDLEYR
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   RGQCRLR--STGGGVQGELDALTFAHRAGLADIFPGLDRRLAGMLLTA-GGMPCLVWQPP  117
             G+  LR  S+ G++    + L+F + +G+A I+P  + RL   L       PCL+W P+
Sbjct  61   NGRYSLRRQSSPGAIP---EMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPA  117

Query  118  QSVSPAISLVFFRLVSAITACQRVLLLAEGERCDGLAPYRLISLDGCWYLTGELNGHITV  177
              ++++++  F +L+ AI  C ++ L+AE  +  +L P RLI   G WYL +  +G + V
Sbjct  118  PDITATFPECFSQLILAIRQCIHISLMAE-RWYPSLEPCRLIYYSGSWYLIALQKGKLQV  176

Query  178  HPLATIHAVTVLNTTFTPRKRLNQLTIQAGFIRALPHFSCIREVLS  223
             PLA I +V++ +  F  R ++++L  +  FI ALPHFS I+ +++
Sbjct  177  FPLADIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLIN  222

41) M621_19610 in NC_021659


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  153 bits (566),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 93/226 (42%), Positives = 150/226 (67%), Gaps = 7/226 (3%)

Query  1    MAQAERRHDRLAVRLSLIISRLVAGETLNMARLAAEFGVSVRTLRRDFRERLMYLDLEYR  60
            M++   RHDRLAVRLSLIISRL++GE+L++  L+ EFGV+ RTL+RDF++RL+ LDLEYR
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   RGQCRLR--STGGGVQGELDALTFAHRAGLADIFPGLDRRLAG-MLLTAGGMPCLVWQPP  117
             G+  LR  S+ G++    + L+F + +G+A I+P  + RL   +       PCL+W P+
Sbjct  61   NGRYSLRRQSSPGAIP---EMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPA  117

Query  118  QPMSPACSQVFYRLVSAITACQRVLLLAEGDRCDGLAPYRLILLDGCWYLTGELNGHITV  177
              ++++ ++ F +L+ AI  C ++ L+AE  +  +L P RLI   G WYL +  +G + V
Sbjct  118  PDITATFPECFSQLILAIRQCIHISLMAE-RWYPSLEPCRLIYYSGSWYLIALQKGKLQV  176

Query  178  HPLAVIHAVTVLNTMFTPRKRLSQLTTQESFIQALPHFNCIREVLS  223
             PLA I +V++ +  F  R ++ +L ++E FI ALPHF+ I+ +++
Sbjct  177  FPLADIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLIN  222

42) H650_18195 in NC_021500


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  152 bits (560),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 92/227 (41%), Positives = 149/227 (66%), Gaps = 7/227 (3%)

Query  1    MTQAERRHDRLAVRLSLIISRLVAGETLNMARLAAEFGVSVRTLRRDFRERLMYLDLEYR  60
            M++   RHDRLAVRLSLIISRL++GE+L++  L+ EFGV+ RTL+RDF++RL+ LDLEYR
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   RGQCRLR--STGGGVQGELDALTFAHRAGLGDIFPGLDRRLAG-MLLTAGGMPCLVWQPP  117
             G+  LR  S+ G++    + L+F + +G++ I+P  + RL   +       PCL+W P+
Sbjct  61   NGRYSLRRQSSPGAIP---EMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPA  117

Query  118  QSVSPAIALVFYRLVSAITACKRILLLAEGERCDGLAPYRLILLDGCWYLTGELNGHITV  177
              ++++++  F +L+ AI  C +I L+AE  +  +L P RLI   G WYL +  +G + V
Sbjct  118  PDITATFPECFSQLILAIRQCIHISLMAE-RWYPSLEPCRLIYYSGSWYLIALQKGKLQV  176

Query  178  HSLAAIHAVTVLNTTFTPRKRLSQLTTQAGFIRALPHFSCIREVLSP  224
             +LA I +V++ +  F  R ++ +L ++  FI ALPHFS I+ +++ 
Sbjct  177  FPLADIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINT  223

43) yfjR in NC_012759


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  149 bits (548),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 97/226 (43%), Positives = 148/226 (66%), Gaps = 3/226 (1%)

Query  1    MTQAERRHDRLAVRLSLIISRLVAGETLSVRKLAAEFGVSVRTLRRDFRERLMYLDLEYQ  60
            M++   RHDRLAVRLSLIISRL++GE+LS++ L+ EFGV+ RTL+RDF++RL+ LDLEY+
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   SGYCRLRTAGSEMQMVPDVLIFAHRSGLAGLFPGLDRRLVNALLMCDE-SPCVIAPANPV  119
            +G   LR  +S    +P++L F + +G+A ++P  + RL+  L   +E SPC+I  + P 
Sbjct  61   NGRYSLRRQSSP-GAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPD  119

Query  120  PSPSGALSFWRLIQAITGRRRVTLIAEGRRCERLAPCRLLIHQQTWYLVAEHEGHIAVFT  179
             +++ +  F +LI AI    +++L+AE R+   L PCRL+    +WYL+A + G + VF 
Sbjct  120  ITATFPECFSQLILAIRQCIHISLMAE-RWYPSLEPCRLIYYSGSWYLIALQKGKLQVFP  178

Query  180  LDEIHLIQPLQETFRRNDSLCRLVEDPVFIQALPHFRFIQHSLLTF  225
            L +I  +    E F R + +  LV +  FI ALPHF FI+  + TF
Sbjct  179  LADIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTF  224

44) EcDH1_1041 in NC_017625


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  149 bits (548),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 97/226 (43%), Positives = 148/226 (66%), Gaps = 3/226 (1%)

Query  1    MTQAERRHDRLAVRLSLIISRLVAGETLSVRKLAAEFGVSVRTLRRDFRERLMYLDLEYQ  60
            M++   RHDRLAVRLSLIISRL++GE+LS++ L+ EFGV+ RTL+RDF++RL+ LDLEY+
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   SGYCRLRTAGSEMQMVPDVLIFAHRSGLAGLFPGLDRRLVNALLMCDE-SPCVIAPANPV  119
            +G   LR  +S    +P++L F + +G+A ++P  + RL+  L   +E SPC+I  + P 
Sbjct  61   NGRYSLRRQSSP-GAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPD  119

Query  120  PSPSGALSFWRLIQAITGRRRVTLIAEGRRCERLAPCRLLIHQQTWYLVAEHEGHIAVFT  179
             +++ +  F +LI AI    +++L+AE R+   L PCRL+    +WYL+A + G + VF 
Sbjct  120  ITATFPECFSQLILAIRQCIHISLMAE-RWYPSLEPCRLIYYSGSWYLIALQKGKLQVFP  178

Query  180  LDEIHLIQPLQETFRRNDSLCRLVEDPVFIQALPHFRFIQHSLLTF  225
            L +I  +    E F R + +  LV +  FI ALPHF FI+  + TF
Sbjct  179  LADIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTF  224

45) yfjR in NC_017638


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  149 bits (548),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 97/226 (43%), Positives = 148/226 (66%), Gaps = 3/226 (1%)

Query  1    MTQAERRHDRLAVRLSLIISRLVAGETLSVRKLAAEFGVSVRTLRRDFRERLMYLDLEYQ  60
            M++   RHDRLAVRLSLIISRL++GE+LS++ L+ EFGV+ RTL+RDF++RL+ LDLEY+
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   SGYCRLRTAGSEMQMVPDVLIFAHRSGLAGLFPGLDRRLVNALLMCDE-SPCVIAPANPV  119
            +G   LR  +S    +P++L F + +G+A ++P  + RL+  L   +E SPC+I  + P 
Sbjct  61   NGRYSLRRQSSP-GAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPD  119

Query  120  PSPSGALSFWRLIQAITGRRRVTLIAEGRRCERLAPCRLLIHQQTWYLVAEHEGHIAVFT  179
             +++ +  F +LI AI    +++L+AE R+   L PCRL+    +WYL+A + G + VF 
Sbjct  120  ITATFPECFSQLILAIRQCIHISLMAE-RWYPSLEPCRLIYYSGSWYLIALQKGKLQVFP  178

Query  180  LDEIHLIQPLQETFRRNDSLCRLVEDPVFIQALPHFRFIQHSLLTF  225
            L +I  +    E F R + +  LV +  FI ALPHF FI+  + TF
Sbjct  179  LADIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTF  224

46) yfjR in NC_010473


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  149 bits (548),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 97/226 (43%), Positives = 148/226 (66%), Gaps = 3/226 (1%)

Query  1    MTQAERRHDRLAVRLSLIISRLVAGETLSVRKLAAEFGVSVRTLRRDFRERLMYLDLEYQ  60
            M++   RHDRLAVRLSLIISRL++GE+LS++ L+ EFGV+ RTL+RDF++RL+ LDLEY+
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   SGYCRLRTAGSEMQMVPDVLIFAHRSGLAGLFPGLDRRLVNALLMCDE-SPCVIAPANPV  119
            +G   LR  +S    +P++L F + +G+A ++P  + RL+  L   +E SPC+I  + P 
Sbjct  61   NGRYSLRRQSSP-GAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPD  119

Query  120  PSPSGALSFWRLIQAITGRRRVTLIAEGRRCERLAPCRLLIHQQTWYLVAEHEGHIAVFT  179
             +++ +  F +LI AI    +++L+AE R+   L PCRL+    +WYL+A + G + VF 
Sbjct  120  ITATFPECFSQLILAIRQCIHISLMAE-RWYPSLEPCRLIYYSGSWYLIALQKGKLQVFP  178

Query  180  LDEIHLIQPLQETFRRNDSLCRLVEDPVFIQALPHFRFIQHSLLTF  225
            L +I  +    E F R + +  LV +  FI ALPHF FI+  + TF
Sbjct  179  LADIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTF  224

47) yfjR in NC_000913


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  149 bits (548),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 97/226 (43%), Positives = 148/226 (66%), Gaps = 3/226 (1%)

Query  1    MTQAERRHDRLAVRLSLIISRLVAGETLSVRKLAAEFGVSVRTLRRDFRERLMYLDLEYQ  60
            M++   RHDRLAVRLSLIISRL++GE+LS++ L+ EFGV+ RTL+RDF++RL+ LDLEY+
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   SGYCRLRTAGSEMQMVPDVLIFAHRSGLAGLFPGLDRRLVNALLMCDE-SPCVIAPANPV  119
            +G   LR  +S    +P++L F + +G+A ++P  + RL+  L   +E SPC+I  + P 
Sbjct  61   NGRYSLRRQSSP-GAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPD  119

Query  120  PSPSGALSFWRLIQAITGRRRVTLIAEGRRCERLAPCRLLIHQQTWYLVAEHEGHIAVFT  179
             +++ +  F +LI AI    +++L+AE R+   L PCRL+    +WYL+A + G + VF 
Sbjct  120  ITATFPECFSQLILAIRQCIHISLMAE-RWYPSLEPCRLIYYSGSWYLIALQKGKLQVFP  178

Query  180  LDEIHLIQPLQETFRRNDSLCRLVEDPVFIQALPHFRFIQHSLLTF  225
            L +I  +    E F R + +  LV +  FI ALPHF FI+  + TF
Sbjct  179  LADIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTF  224

48) yfjR in NC_007779


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  149 bits (548),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 97/226 (43%), Positives = 148/226 (66%), Gaps = 3/226 (1%)

Query  1    MTQAERRHDRLAVRLSLIISRLVAGETLSVRKLAAEFGVSVRTLRRDFRERLMYLDLEYQ  60
            M++   RHDRLAVRLSLIISRL++GE+LS++ L+ EFGV+ RTL+RDF++RL+ LDLEY+
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   SGYCRLRTAGSEMQMVPDVLIFAHRSGLAGLFPGLDRRLVNALLMCDE-SPCVIAPANPV  119
            +G   LR  +S    +P++L F + +G+A ++P  + RL+  L   +E SPC+I  + P 
Sbjct  61   NGRYSLRRQSSP-GAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPD  119

Query  120  PSPSGALSFWRLIQAITGRRRVTLIAEGRRCERLAPCRLLIHQQTWYLVAEHEGHIAVFT  179
             +++ +  F +LI AI    +++L+AE R+   L PCRL+    +WYL+A + G + VF 
Sbjct  120  ITATFPECFSQLILAIRQCIHISLMAE-RWYPSLEPCRLIYYSGSWYLIALQKGKLQVFP  178

Query  180  LDEIHLIQPLQETFRRNDSLCRLVEDPVFIQALPHFRFIQHSLLTF  225
            L +I  +    E F R + +  LV +  FI ALPHF FI+  + TF
Sbjct  179  LADIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTF  224

49) P12B_c0278 in NC_017663


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  149 bits (547),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 96/226 (43%), Positives = 149/226 (66%), Gaps = 3/226 (1%)

Query  1    MTQAERRHDRLAVRLSLIISRLVAGETLSVRKLAAEFGVSVRTLRRDFRERLMYLDLEYQ  60
            M++   RHDRLAVRLSLIISRL++GE+LS++ L+ EFGV+ RTL+RDF++RL+ LDLEY+
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   SGYCRLRTAGSETQMVPDVLIFAHRSGMAGLFPGFDRRLVNALLMCDE-SPCVIAPANPV  119
            +G   LR  +S    +P++L F + +G+A ++P  + RL+  L   +E SPC+I  + P 
Sbjct  61   NGRYSLRRQSSPGA-IPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPD  119

Query  120  PSPSGALSFWRLIQAITGRRRVTLIAEEQRCERLAPCRLLIHQQAWYLVAEHDGHIAVFT  179
             +++ +  F +LI AI    +++L+A E++   L PCRL+    +WYL+A + G + VF 
Sbjct  120  ITATFPECFSQLILAIRQCIHISLMA-ERWYPSLEPCRLIYYSGSWYLIALQKGKLQVFP  178

Query  180  LDEIHLVQPLQETFRRNDSLCRLVEDPGFIQSLPHFRFIQQSLLTF  225
            L +I  V    E F R + +  LV +  FI +LPHF FI++ + TF
Sbjct  179  LADIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTF  224

50) Entcl_0686 in NC_014618


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  140 bits (515),  Expect = 6e-35, Method: Compositional matrix adjust.
 Identities = 91/223 (41%), Positives = 145/223 (66%), Gaps = 2/223 (0%)

Query  1    MPLTERRYDRLAVRLSLIISRLVAGETLEMQKLATEFDVSVRTLYRDFRERLMYLDLECH  60
            M+    R DRLAVRLSLIISRL++GE+L ++ L+ EF+V+ RTL RDF++RL+ LDLE +
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   QGCYRLRTGAGPQGELDVLTFAYRAGLADIFPgldrrlag-allasdgTPCLVWQSPQPI  119
            +G Y LR  ++P +  ++L+F   +G+A I+P  + RL        + +PCL+W ++  I
Sbjct  61   NGRYSLRRQSSPGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDI  120

Query  120  TATSPLVFYRLVSAITGSQRVLLLADGERCDGLAPYRLIFLDGCWYLTGELNGHITVHPL  179
            TAT P  F +L+ AI    ++ L+A+  +  +L P RLI+  G WYL +  +G + V PL
Sbjct  121  TATFPECFSQLILAIRQCIHISLMAE-RWYPSLEPCRLIYYSGSWYLIALQKGKLQVFPL  179

Query  180  ATIHAVTILNTTFTPRKRLSQLTTQAGFIRALPHFSCIREVLS  222
            A I +V++ +  F  R ++ +L ++  FI ALPHFS I+ +++
Sbjct  180  ADIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLIN  222

51) CFSAN002050_05935 in NC_021818


> NC_008563_P4|44|G43|117625236|YP_854319.1|Escherichia_coli_APEC_O1|+|47582..48262|-|APECO1_3492|transcriptional 
regulator
Length=226

 Score =  125 bits (458),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 95/227 (42%), Positives = 147/227 (65%), Gaps = 3/227 (1%)

Query  1    MTRTERRHDrlairlsliisrlVTGETLDMHKLAAEFGVSTRTLYRDFHERLMYLDLECH  60
            M+    RHDRLA+RLSLIISRL+TGE+L +  L+ EFGV+ RTL RDFH+RL+ LDLE +
Sbjct  1    MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYR  60

Query  61   NGCYRLRNSGGGPQAELDVLTFIHRAGMSGLFPGLNRRLVS-LFLACDDVPCLVGETLTD  119
            NG Y LR  ++ P A  ++L+FI+ +G++ ++P  N RL++ L    +  PCL+     D
Sbjct  61   NGRYSLRRQSS-PGAIPEMLSFIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPD  119

Query  120  LGTSAPLSFYHLVKAITTCQRVTLLAEGQRCEHLAPYRLVARENDWYLIAEHHGRPVVFV  179
            + ++ P  F +L+ AI  C +++L+AE ++   L P RL+     WYLIA + G+  VF 
Sbjct  120  ITATFPECFSQLILAIRQCIHISLMAE-RWYPSLEPCRLIYYSGSWYLIALQKGKLQVFP  178

Query  180  LREIHVVQLTGEVFRRNERLYRMAENTGFIQALPHFRCIQQSLDALS  226
            L +I  V LT+E F R  ++  +  +  FI ALPHF  I++ +++++
Sbjct  179  LADIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFN  225