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Homologs of SE0066 gene of NC_004461_R1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SE0066
( NP_763621.1 )

transposase

NC_004461
(Staphylococcus epidermidis ATCC 12228)

2e-10

100

2) RSAU_000346
( YP_008484408.1 )

hypothetical protein

NC_022222
(Staphylococcus aureus 6850)

3e-04

3) RSAU_000899
( YP_008484926.1 )

hypothetical protein

NC_022222
(Staphylococcus aureus 6850)

3e-04

4) RSAU_000920
( YP_008484945.1 )

hypothetical protein

NC_022222
(Staphylococcus aureus 6850)

3e-04

5) RSAU_002353
( YP_008486300.1 )

hypothetical protein

NC_022222
(Staphylococcus aureus 6850)

3e-04

• Sequence Alignments

1) SE0066 in NC_004461


> NC_004461_R1|44|G44|27466984|NP_763621.1|Staphylococcus_epidermidis_ATCC_12228|-|35536..35643|-|SE0066|transposase
Length=35

 Score = 59.2 bits (205),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 35/35 (100%), Positives = 35/35 (100%), Gaps = 0/35 (0%)

Query  1   MNKDSKAFYHFNRMPLITYEMFIKDKTKKYKSDIS  35
           MNKDSKAFYHFNRMPLITYEMFIKDKTKKYKSDIS
Sbjct  1   MNKDSKAFYHFNRMPLITYEMFIKDKTKKYKSDIS  35

2) RSAU_000346 in NC_022222


> NC_004461_R1|44|G44|27466984|NP_763621.1|Staphylococcus_epidermidis_ATCC_12228|-|35536..35643|-|SE0066|transposase
Length=35

 Score = 38.2 bits (125),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 19/25 (76%), Positives = 23/25 (92%), Gaps = 0/25 (0%)

Query  6   DFNKTPLITYGMFIKDKTRKFKSDI  30
           +FN+ PLITY MFIKDKT+K+KSDI
Sbjct  10  HFNRMPLITYEMFIKDKTKKYKSDI  34

3) RSAU_000899 in NC_022222


> NC_004461_R1|44|G44|27466984|NP_763621.1|Staphylococcus_epidermidis_ATCC_12228|-|35536..35643|-|SE0066|transposase
Length=35

 Score = 38.2 bits (125),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 19/25 (76%), Positives = 23/25 (92%), Gaps = 0/25 (0%)

Query  6   DFNKTPLITYGMFIKDKTRKFKSDI  30
           +FN+ PLITY MFIKDKT+K+KSDI
Sbjct  10  HFNRMPLITYEMFIKDKTKKYKSDI  34

4) RSAU_000920 in NC_022222


> NC_004461_R1|44|G44|27466984|NP_763621.1|Staphylococcus_epidermidis_ATCC_12228|-|35536..35643|-|SE0066|transposase
Length=35

 Score = 38.2 bits (125),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 19/25 (76%), Positives = 23/25 (92%), Gaps = 0/25 (0%)

Query  6   DFNKTPLITYGMFIKDKTRKFKSDI  30
           +FN+ PLITY MFIKDKT+K+KSDI
Sbjct  10  HFNRMPLITYEMFIKDKTKKYKSDI  34

5) RSAU_002353 in NC_022222


> NC_004461_R1|44|G44|27466984|NP_763621.1|Staphylococcus_epidermidis_ATCC_12228|-|35536..35643|-|SE0066|transposase
Length=35

 Score = 38.2 bits (125),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 19/25 (76%), Positives = 23/25 (92%), Gaps = 0/25 (0%)

Query  6   DFNKTPLITYGMFIKDKTRKFKSDI  30
           +FN+ PLITY MFIKDKT+K+KSDI
Sbjct  10  HFNRMPLITYEMFIKDKTKKYKSDI  34