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Homologs of hrpR gene of AY597277

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) hrpR
( NP_791206.1 )

type III transcriptional regulator HrpR

NC_004578
(Pseudomonas syringae DC3000)

5e-125

2) hrpR
( YP_273529.1 )

type III transcriptional regulator HrpR

NC_005773
(Pseudomonas syringae 1448A)

5e-123

3) HrpR
( YP_234282.1 )

type III transcriptional regulator HrpR

NC_007005
(Pseudomonas syringae B728a)

2e-118

4) Pmen_0033
( YP_001185540.1 )

sigma-54 dependent trancsriptional regulator

NC_009439
(Pseudomonas mendocina ymp)

1e-91

5) Pmen_0032
( YP_001185539.1 )

sigma-54 dependent trancsriptional regulator

NC_009439
(Pseudomonas mendocina ymp)

6e-84

6) hrpS
( NP_791207.1 )

type III transcriptional regulator HrpS

NC_004578
(Pseudomonas syringae DC3000)

1e-79

7) HrpS
( YP_234283.1 )

type III transcriptional regulator HrpS

NC_007005
(Pseudomonas syringae B728a)

3e-78

8) rspS
( YP_006322245.1 )

type III secretion system transcriptional regulator RspS

NC_017911
(Pseudomonas fluorescens A506)

7e-78

9) hrpS
( YP_003883235.1 )

HrpS type III protein secretion system regulatory protein

NC_014500
(Dickeya dadantii 3937)

2e-76

10) PCC21_022790
( YP_006646935.1 )

HrpS

NC_018525
(Pectobacterium carotovorum PCC21)

3e-76

11) PC1_2201
( YP_003017776.1 )

Fis family sigma-54 specific transcriptional regulator

NC_012917
(Pectobacterium carotovorum PC1)

1e-75

12) hrpS
( YP_050185.1 )

sigma-54-dependent enhancer-binding protein

NC_004547
(Pectobacterium atrosepticum SCRI1043)

1e-75

13) Ser39006_2908
( YP_008523290.1 )

sigma54 specific transcriptional regulator, Fis family

NC_022268
(Serratia sp. ATCC 39006)

2e-75

14) Dd586_1893
( YP_003333457.1 )

sigma54 specific transcriptional regulator, Fis family

NC_013592
(Dickeya dadantii Ech586)

5e-75

15) Dd1591_1896
( YP_003004225.1 )

sigma54 specific transcriptional regulator, Fis family

NC_012912
(Dickeya zeae Ech1591)

7e-75

16) hrpS
( YP_273530.1 )

type III transcriptional regulator HrpS

NC_005773
(Pseudomonas syringae 1448A)

2e-74

17) hrpS
( YP_005210952.1 )

protein HrpS

NC_016830
(Pseudomonas fluorescens F113)

7e-74

18) PSEBR_a5366
( YP_004356874.1 )

Fis family transcriptional regulator

NC_015379
(Pseudomonas brassicacearum NFM421)

8e-74

19) rspR
( YP_002870393.1 )

putative type III secretion system, regulatory protein

NC_012660
(Pseudomonas fluorescens SBW25)

2e-73

20) hrpS
( YP_005804080.1 )

Sigma-54-dependent enhancer-binding protein HrpS

NC_017390
(Erwinia pyrifoliae DSM 12163)

9e-72

21) hrpS
( YP_002650063.1 )

Hrp/hrc secretion/translocation pathway protein HrpS

NC_012214
(Erwinia pyrifoliae Ep1/96)

9e-72

22) hrpS
( YP_005818266.1 )

hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation pathway-hrpS protein

NC_017445
(Erwinia sp. Ejp617)

2e-71

23) hrpS
( YP_001906474.1 )

Sigma-54-dependent enhancer-binding protein HrpS (hrp cluster)

NC_010694
(Erwinia tasmaniensis Et1/99)

2e-70

24) hrpS
( YP_003539957.1 )

sigma-54-dependent enhancer-binding protein

NC_013971
(Erwinia amylovora ATCC 49946)

1e-69

25) hrpS
( YP_003529897.1 )

sigma-54-dependent enhancer-binding protein HrpS

NC_013961
(Erwinia amylovora CFBP1430)

1e-69

26) D781_3924
( YP_007346299.1 )

sigma-54 interacting regulator

NC_020064
(Serratia marcescens FGI94)

1e-66

27) H045_00470
( YP_007395666.1 )

type III secretion system transcriptional regulator RspS

NC_020209
(Pseudomonas poae RE*1-1-14)

2e-64

28) Sden_3661
( YP_564659.1 )

sigma-54 factor, interaction region

NC_007954
(Shewanella denitrificans OS217)

2e-46

29) Ssed_0079
( YP_001471820.1 )

sigma-54 dependent trancsriptional regulator

NC_009831
(Shewanella sediminis HAW-EB3)

8e-45

30) Sputcn32_3478
( YP_001184987.1 )

sigma-54 dependent trancsriptional regulator

NC_009438
(Shewanella putrefaciens CN-32)

3e-43

31) Sputw3181_0461
( YP_961866.1 )

sigma-54 dependent trancsriptional regulator

NC_008750
(Shewanella sp. W3-18-1)

3e-43

32) Hsero_0949
( YP_003774374.1 )

sigma-54 dependent transcription regulator protein

NC_014323
(Herbaspirillum seropedicae SmR1)

1e-42

33) Sbal117_4139
( YP_006039289.1 )

Fis family sigma-54 specific transcriptional regulator

NC_017579
(Shewanella baltica OS117)

2e-42

34) Sbal_3981
( YP_001052318.1 )

sigma-54 dependent trancsriptional regulator

NC_009052
(Shewanella baltica OS155)

2e-42

35) Sbal175_0429
( YP_006019030.1 )

Fis family sigma-54 specific transcriptional regulator

NC_017571
(Shewanella baltica BA175)

3e-42

36) AciX8_2166
( YP_005057520.1 )

Fis family sigma-54 specific transcriptional regulator

NC_016631
(Granulicella mallensis MP5ACTX8)

2e-41

37) swp_5090
( YP_002314292.1 )

Helix-turn-helix, Fis-type

NC_011566
(Shewanella piezotolerans WP3)

4e-41

38) SSON53_16880
( YP_005457882.1 )

formate hydrogenlyase transcriptional activator FhlA

NC_016822
(Shigella sonnei 53G)

1e-40

39) MEALZ_0567
( YP_004915859.1 )

Fis family transcriptional regulator

NC_016112
(Methylomicrobium alcaliphilum 20Z)

8e-41

40) Nhal_2343
( YP_003527818.1 )

Fis family transcriptional regulator

NC_013960
(Nitrosococcus halophilus Nc 4)

3e-40

41) Spea_0085
( YP_001499949.1 )

sigma-54 dependent trancsriptional regulator

NC_009901
(Shewanella pealeana ATCC 700345)

3e-38

42) SCE1572_16595
( YP_008149739.1 )

hypothetical protein

NC_021658
(Sorangium cellulosum So0157-2)

2e-37

43) PputW619_0299
( YP_001747174.1 )

putative sigma-54 specific transcriptional regulator

NC_010501
(Pseudomonas putida W619)

3e-37

44) PP4_52350
( YP_008116272.1 )

hypothetical protein

NC_021505
(Pseudomonas putida NBRC 14164)

5e-37

45) PputGB1_5223
( YP_001671441.1 )

putative sigma-54 specific transcriptional regulator

NC_010322
(Pseudomonas putida GB-1)

8e-37

46) LFML04_2112
( YP_006767268.1 )

response regulator receiver protein

NC_018649
(Leptospirillum ferriphilum ML-04)

1e-32

• Sequence Alignments

1) hrpR in NC_004578


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  439 bits (1655),  Expect = 5e-125, Method: Compositional matrix adjust.
 Identities = 261/311 (84%), Positives = 288/311 (93%), Gaps = 0/311 (0%)

Query  1    MSTGIDKDVRECWGVTALSAGHQIAMNSAFLDMDLLLCGETGTGKDTLANRIHELSSRSG  60
            M T +  D RE WG+TA S GHQ+ MN+A++DMDLLLCGETGTGKDTLAN IH+LSSR+G
Sbjct  1    MDTKFITDARERWGITAQSEGHQVVMNGAIMDMDLLLCGETGTGKDTLANTIHNLSSRTG  60

Query  61   PFVGMNCAAIPESLAESQLFGVVNGAFTGVCRAREGYIEASSGGTLYLDEIDSMPLSLQA  120
            PFVGMNCAAIPESLAESQLFGV +GAFTGVCR+REGYIEAS+GGTLYLDEIDSMP+SLQA
Sbjct  61   PFVGMNCAAIPESLAESQLFGVSSGAFTGVCRSREGYIEASNGGTLYLDEIDSMPMSLQA  120

Query  121  KLLRVLESRGIERLGSTEFIPVDLRIIASAQRPLDELVEQGLFRRDLFFRLNVLTLHLPA  180
            KLL+VLE+RG+ERLGSTEFIPVDLR+IASAQRPLDELVEQGLFRRDL+FRLN LTL+LPA
Sbjct  121  KLLHVLENRGVERLGSTEFIPVDLRVIASAQRPLDELVEQGLFRRDLYFRLNALTLQLPA  180

Query  181  LRKRREQILPLFDQFTQGIAAEFGRPAPALDSGRVQLLLSHDWPGNIRELKSAAKRFVLG  240
            LR RREQILPLFDQFTQ+IAAEFGR+AP LDSGRVQLLLSHDW+GNIRELKSAAKRFVLG
Sbjct  181  LRTRREQILPLFDQFTQAIAAEFGRSAPVLDSGRVQLLLSHDWSGNIRELKSAAKRFVLG  240

Query  241  FPLLGADPVEALDPATGLRTQMRIIEKMLIQDALKRHRHNFDAVLQELELPRRTLYHRMK  300
            FPLLG + +E+ D  TGLRTQ+R+IEK LIQDALKRHRHN DAVLQELELPRRTLYHRMK
Sbjct  241  FPLLGVELLEPEDCDTGLRTQLRVIEKRLIQDALKRHRHNVDAVLQELELPRRTLYHRMK  300

Query  301  ELGVAAPIAAT  311
            ELGVAA I+A 
Sbjct  301  ELGVAAQITAP  311

2) hrpR in NC_005773


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  433 bits (1630),  Expect = 5e-123, Method: Compositional matrix adjust.
 Identities = 256/306 (84%), Positives = 284/306 (93%), Gaps = 0/306 (0%)

Query  1    MSTDIDKGVREYWDVTALSAGHQIVMNSAFLDMDLLLCGETGTGKDTLANRIHELSSRSG  60
            M T +  + RE W++TA S GHQ+VMN+A++DMDLLLCGETGTGKDTLAN IH+LSSR+G
Sbjct  1    MDTKFITDARERWGITAQSEGHQVVMNGAIMDMDLLLCGETGTGKDTLANTIHNLSSRTG  60

Query  61   PFVGMNCAAIPESLAESQLFGVVNGAFTGVCRAREGYIEASSGGTLYLDEIDSMPLSLQA  120
            PFVGMNCAAIPESLAESQLFGV +GAFTGVCR+REGYIEAS+GGTLYLDEIDSMP+SLQA
Sbjct  61   PFVGMNCAAIPESLAESQLFGVSSGAFTGVCRSREGYIEASNGGTLYLDEIDSMPMSLQA  120

Query  121  KLLRVLESRGVERLGSTEFIPLDLRVIASAQRPLDELVEQGLFRRDLFFRLNVLTLHLPA  180
            KLL+VLE+RGVERLGSTEFIP+DLRVIASAQRPLDELVEQGLFRRDL+FRLN LTL+LPA
Sbjct  121  KLLHVLENRGVERLGSTEFIPVDLRVIASAQRPLDELVEQGLFRRDLYFRLNALTLQLPA  180

Query  181  LRKRREQILPLFDQFTQEIAAEFQRPVPVLDNGRVQILLSHDWPGNVRELKSAAKRFVLG  240
            LR RREQILPLFDQFTQ IAAEF R+ PVLD+GRVQ+LLSHDW+GN+RELKSAAKRFVLG
Sbjct  181  LRTRREQILPLFDQFTQAIAAEFGRSAPVLDSGRVQLLLSHDWSGNIRELKSAAKRFVLG  240

Query  241  FPLLGAEPMDARDPVTGLRMQMRVIEKMLIQDALKRHRHNVDAVLQELELPRRTLYHRMK  300
            FPLLG E +++ D  TGLR Q+RVIEK LIQDALKRHRHNVDAVLQELELPRRTLYHRMK
Sbjct  241  FPLLGVELLEPEDCDTGLRTQLRVIEKRLIQDALKRHRHNVDAVLQELELPRRTLYHRMK  300

Query  301  ELGVAA  306
            ELGVAA
Sbjct  301  ELGVAA  306

3) HrpR in NC_007005


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  417 bits (1571),  Expect = 2e-118, Method: Compositional matrix adjust.
 Identities = 247/295 (84%), Positives = 274/295 (93%), Gaps = 0/295 (0%)

Query  14   NVTALSAGHQIVMNSVLMDMDLLLCGETGTGKDTLASRIHELSSRTGPFVGMNCAAIPES  73
             +TA S GHQ+VMN+ +MDMDLLLCGETGTGKDTLA+ IH+LSSRTGPFVGMNCAAIPES
Sbjct  14   GITAQSEGHQVVMNGAIMDMDLLLCGETGTGKDTLANTIHNLSSRTGPFVGMNCAAIPES  73

Query  74   LAESQLFGVVNGAFTGVCRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGVER  133
            LAESQLFGV +GAFTGVCR+REGYIEAS+GGTLYLDEIDSMP+SLQAKLL+VLE+RGVER
Sbjct  74   LAESQLFGVSSGAFTGVCRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRGVER  133

Query  134  LGSTDFIPLDLRVIASAQRPLDELVEQGLFRRDLFFRLNVLTLQLPALRKRREQILPLFD  193
            LGST+FIP+DLRVIASAQRPLDELVEQGLFRRDL+FRLN LTLQLPALR RREQILPLFD
Sbjct  134  LGSTEFIPVDLRVIASAQRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILPLFD  193

Query  194  QFTQDVAAESGRSVPTLDNRRVQILLSHDWPGNVRELKSAAKRFVLGLPLLGAEPVEARD  253
            QFTQ +AAE GRS P LD+ RVQ+LLSHDW+GN+RELKSAAKRFVLG+PLLG E +E+ D
Sbjct  194  QFTQAIAAEFGRSAPVLDSGRVQLLLSHDWSGNIRELKSAAKRFVLGFPLLGVELLEPED  253

Query  254  PVTGLRMQMRVIEKMLIQDALKRHRHNFDAVLEELELPRRTLYHRMKELGVASHI  308
              TGLR Q+RVIEK LIQDALKRHRHN DAVL+ELELPRRTLYHRMKELGVA++I
Sbjct  254  CDTGLRTQLRVIEKRLIQDALKRHRHNVDAVLQELELPRRTLYHRMKELGVAAQI  308

4) Pmen_0033 in NC_009439


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  329 bits (1233),  Expect = 1e-91, Method: Compositional matrix adjust.
 Identities = 191/309 (62%), Positives = 249/309 (81%), Gaps = 5/309 (1%)

Query  1    MSRGVAAEKSARRHGGTDVPELGITLSAGHFRMDLLLCGETGTGKDVLARHIHDLSGRTG  60
            M     ++   R+   ++     + ++++   MDLLLCGETGTGKD LA  IH+LS+RTG
Sbjct  1    MDTKFITDARERWGITAQSEGHQVVMNGAIMDMDLLLCGETGTGKDTLANTIHNLSSRTG  60

Query  61   AFVGINCAAIPEALAESQLFGVASGAFTGANRSRQGYIEASNDGTLYLDEIDSMPLQLQA  120
            +FVG+NCAAIPE+LAESQLFGV+SGAFTG  RSR+GYIEASN+GTLYLDEIDSMP+ LQA
Sbjct  61   PFVGMNCAAIPESLAESQLFGVSSGAFTGVCRSREGYIEASNGGTLYLDEIDSMPMSLQA  120

Query  121  KLLRVLETRGVERLGTTKFIPLNLRIIASTQRPLEELVEQGLFRRDLLFRLNAMTLSLPP  180
            KLL+VLE RGVERLG+T FIP++LR+IAS+QRPL+ELVEQGLFRRDL FRLNA+TL LP+
Sbjct  121  KLLHVLENRGVERLGSTEFIPVDLRVIASAQRPLDELVEQGLFRRDLYFRLNALTLQLPA  180

Query  181  LRQRRELILPLFKRFTRSLGAKQANGAQALDSQLIQLLLSHPWPGNIRELKSAAKRYVIG  240
            LR RRE ILPLF +FT++++A  + +A  LDS  +QLLLSH W+GNIRELKSAAKR+V+G
Sbjct  181  LRTRREQILPLFDQFTQAIAAEFGRSAPVLDSGRVQLLLSHDWSGNIRELKSAAKRFVLG  240

Query  241  LPPIDAGVLADLEDGDFPHDRGLKKRMRAVEKMLIQDALKRHKNGLEAVAEELGISRRTL  300
            +P ++  +L   +      D GL+ ++R +EK LIQDALKRH++ ++AV +EL ++RRTL
Sbjct  241  FPLLGVELLEPED-----CDTGLRTQLRVIEKRLIQDALKRHRHNVDAVLQELELPRRTL  295

Query  301  YQRIKELDV  309
            Y+R+KEL+V
Sbjct  296  YHRMKELGV  304

5) Pmen_0032 in NC_009439


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  303 bits (1136),  Expect = 6e-84, Method: Compositional matrix adjust.
 Identities = 177/274 (65%), Positives = 235/274 (86%), Gaps = 2/274 (0%)

Query  30   LNIDVLLTGETGSGKDTLAQYLHKLSGRKGPFVAMNCAAIPESLFESELFGVTSGAYTGA  89
            +++D+LL GETG+GKDTLA+ +H+LS+R GPFV+MNCAAIPESL ES+LFGV+SGA+TG 
Sbjct  31   MDMDLLLCGETGTGKDTLANTIHNLSSRTGPFVGMNCAAIPESLAESQLFGVSSGAFTGV  90

Query  90   DHSRMGYVEAAQGGTLYLDEIDSMPAFLQAKLLRVLETRQIERLGSTTPVPLDICVVASA  149
             +SR GY+EA++GGTLYLDEIDSMP  LQAKLL+VLE R +ERLGST  +P+D+ V+ASA
Sbjct  91   CRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRGVERLGSTEFIPVDLRVIASA  150

Query  150  QRSLDALVEQGEFRRDLYFRLNVLTLRLPALRQKREWIIPMFERFAFEASQDMDTALPVI  209
            QR+LD LVEQG FRRDLYFRLN LTL+LPALR +RE I+P+F++F+   + + + + PV+
Sbjct  151  QRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILPLFDQFTQAIAAEFGRSAPVL  210

Query  210  DPAIEHVLLNHDWPGNLRELKSAAKRHVLGINLLGIEAEQPIECD--LKCQLRLIEKVLI  267
            D++  ++LL+HDW+GN+RELKSAAKR VLG+ LLG+E  +P +CD  L+ QLR+IEK LI
Sbjct  211  DSGRVQLLLSHDWSGNIRELKSAAKRFVLGFPLLGVELLEPEDCDTGLRTQLRVIEKRLI  270

Query  268  QESLQRHEHCIEAVLHELDIPRRTLYHRMKELDV  301
            Q++L+RH H ++AVL+EL++PRRTLYHRMKEL+V
Sbjct  271  QDALKRHRHNVDAVLQELELPRRTLYHRMKELGV  304

6) hrpS in NC_004578


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  288 bits (1080),  Expect = 1e-79, Method: Compositional matrix adjust.
 Identities = 176/274 (65%), Positives = 228/274 (84%), Gaps = 0/274 (0%)

Query  29   LGIDVLLSGETGTGKDTIARRIHEMSGRKGRLVAMNCAAIPESLAESELFGVVSGAYTGA  88
            +++D+LL GETGTGKDT+A  IH++S+R G +V+MNCAAIPESLAES+LFGV SGA+TG 
Sbjct  31   MDMDLLLCGETGTGKDTLANTIHNLSSRTGPFVGMNCAAIPESLAESQLFGVSSGAFTGV  90

Query  89   DRSRVGYVEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDICVIASA  148
             RSR GY+EA++GGTLYLDEIDSMP+SLQAKLL+VLE R++ERLGST  I +D+ VIASA
Sbjct  91   CRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRGVERLGSTEFIPVDLRVIASA  150

Query  149  QCSLDDAVERGQFRRDLYFRLNVLTLKLPPLRNQSDRIVPLFTRFTAAAARELGVPVPDV  208
            Q +LD+ VE+G FRRDLYFRLN LTL+LP+LR + ++I+PLF +FT A A E+G + P +
Sbjct  151  QRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILPLFDQFTQAIAAEFGRSAPVL  210

Query  209  CPLLHKVLLGHDWPGNIRELKAAAKRHVLGFPLLGAEPQGEEHLACGLKSQLRVIEKALI  268
             +   ++LL+HDW+GNIRELK+AAKR VLGFPLLG E    E+   GL++QLRVIEK LI
Sbjct  211  DSGRVQLLLSHDWSGNIRELKSAAKRFVLGFPLLGVELLEPEDCDTGLRTQLRVIEKRLI  270

Query  269  QESLKRHDNCVDSVSLELDVPRRTLYRRIKELQI  302
            Q++LKRH + VD+V  EL++PRRTLY+R+KEL +
Sbjct  271  QDALKRHRHNVDAVLQELELPRRTLYHRMKELGV  304

7) HrpS in NC_007005


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  284 bits (1063),  Expect = 3e-78, Method: Compositional matrix adjust.
 Identities = 176/274 (65%), Positives = 223/274 (82%), Gaps = 0/274 (0%)

Query  29   LGIDVLLSGETGTGKDTIARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSGAYTGA  88
            +++D+LL GETGTGKDT+A  IHN+S+R G FV MNCAAIPESLAES+LFGV SGA+TG 
Sbjct  31   MDMDLLLCGETGTGKDTLANTIHNLSSRTGPFVGMNCAAIPESLAESQLFGVSSGAFTGV  90

Query  89   DRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTINLDICVIASA  148
             RSR GYIEA++GGTLYLDEIDSMP++LQAKLL+VLE R++ERLGST  I +D+ VIASA
Sbjct  91   CRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRGVERLGSTEFIPVDLRVIASA  150

Query  149  QACLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKELSVPIPDV  208
            Q  LD+ VE+G FRRDLYFRLN LTL+LP+LR + E+ILPLF +F  A A E++ + P +
Sbjct  151  QRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILPLFDQFTQAIAAEFGRSAPVL  210

Query  209  CPLLQQVLTGHHWPGNIRELKAAAKRHVLGFPLLGADSQTEEHLACGLKFQLRAIEKALI  268
             +   Q+L +H+W+GNIRELK+AAKR VLGFPLLG +    E+   GL+ QLR IEK LI
Sbjct  211  DSGRVQLLLSHDWSGNIRELKSAAKRFVLGFPLLGVELLEPEDCDTGLRTQLRVIEKRLI  270

Query  269  QQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302
            Q+ALKRHR+ +DA   EL++PRRTLY+R+KEL++
Sbjct  271  QDALKRHRHNVDAVLQELELPRRTLYHRMKELGV  304

8) rspS in NC_017911


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  283 bits (1059),  Expect = 7e-78, Method: Compositional matrix adjust.
 Identities = 170/289 (59%), Positives = 231/289 (80%), Gaps = 3/289 (1%)

Query  17   DGQEIETTLNNTAALNVDILLLGETGTGKDTLAQRIHRLSGRRGNFVAVNCAAIPESLAE  76
            +G+++   + N A +++D+LL GETGTGKDTLA+ IH LS+R G FV++NCAAIPESLAE
Sbjct  20   EGHQV---VMNGAIMDMDLLLCGETGTGKDTLANTIHNLSSRTGPFVGMNCAAIPESLAE  76

Query  77   SQLFGVNSGAYTGAVQSRAGFVEAAHLGTLYLDEIDSMPLSLQAKLLRVLECRGVERLGS  136
            SQLFGV+SGA+TG  +SR G++EA++ GTLYLDEIDSMP+SLQAKLL+VLE RGVERLGS
Sbjct  77   SQLFGVSSGAFTGVCRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRGVERLGS  136

Query  137  TRFISVDMRVIASAQQSLQIMVDQGAFRRDLYFRLNVVNIELPALRDRRERIIPLFLQMI  196
            T FI+VD+RVIASAQ++L+ +V+QG FRRDLYFRLN + ++LPALR RRE+I+PLF Q  
Sbjct  137  TEFIPVDLRVIASAQRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILPLFDQFT  196

Query  197  QEEADQFNCTPPSPSDGLLHELLCHPWLGNVRELRSAAKRFVLGLPPLSAPACRQPPPQT  256
            Q  A +F  ++P    G ++ LL H W GN+REL+SAAKRFVLG+P L+         +T
Sbjct  197  QAIAAEFGRSAPVLDSGRVQLLLSHDWSGNIRELKSAAKRFVLGFPLLGVELLEPEDCDT  256

Query  257  DLKARLQQIEKALIEESMYRHQHCVDTVAIELGVAKRTLYYRMKQLNIS  305
            +L+++L+ IEK LI++++ RH+H VD+V  EL +++RTLY RMK+L ++
Sbjct  257  GLRTQLRVIEKRLIQDALKRHRHNVDAVLQELELPRRTLYHRMKELGVA  305

9) hrpS in NC_014500


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  279 bits (1043),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 158/283 (56%), Positives = 230/283 (82%), Gaps = 6/283 (2%)

Query  43   LNVDIVLEGETGTGKDTLARRIHQLSGCAGPLVAVNCAAVPETLAESELFGVVSGAYTGA  102
            +++D++L GETGTGKDTLA  IH+LS+ +GP+V++NCAA+PE+LAES+LFGV SGA+TG 
Sbjct  31   MDMDLLLCGETGTGKDTLANTIHNLSSRTGPFVGMNCAAIPESLAESQLFGVSSGAFTGV  90

Query  103  SRSRAGYLETADKGILFLDEIDSMPLTLQAKMLRVLESRGIERLGSTQFKPVDMRVIVAT  162
             RSR GY+E+++ G L+LDEIDSMP++LQAK+L+VLE+RG+ERLGST+F PVD+RVI ++
Sbjct  91   CRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRGVERLGSTEFIPVDLRVIASA  150

Query  163  QTPLQKLVDEGRFRRDLYFRLDTVKIQLPTLRSRTEIILPLFERFLLEASARLKRPAPGL  222
            Q PL+ LV++G FRRDLYFRL+++ +QLP+LR+R E ILPLF++F    +A + R+AP L
Sbjct  151  QRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILPLFDQFTQAIAAEFGRSAPVL  210

Query  223  SAIIQEQLLMHGWPGNIRELKAAAERWVLGLSPVPIASDGDVQVMGEDTPLTSLKVRLRR  282
             +   + LL H+W+GNIRELK+AA R VLG++ +      +V+++  +   T+L+ +LR 
Sbjct  211  DSGRVQLLLSHDWSGNIRELKSAAKRFVLGFPLL------GVELLEPEDCDTGLRTQLRV  264

Query  283  IERFLIQEALQRNDHCIDTVVNELGIPKRTLYHRIKLLNVAAR  325
            IE+ LIQ+AL+R+ H +D+V++EL +P+RTLYHR+K L VAA+
Sbjct  265  IEKRLIQDALKRHRHNVDAVLQELELPRRTLYHRMKELGVAAQ  307

10) PCC21_022790 in NC_018525


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  278 bits (1041),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 162/279 (59%), Positives = 224/279 (81%), Gaps = 4/279 (1%)

Query  68   LNVDIVLEGETGTGKDTLANRIHQLSRCSGPLVAVNCAAVPENLAESELFGVVSGAYTGA  127
            +++D++L GETGTGKDTLAN IH+LS  +GP+V++NCAA+PE+LAES+LFGV SGA+TG 
Sbjct  31   MDMDLLLCGETGTGKDTLANTIHNLSSRTGPFVGMNCAAIPESLAESQLFGVSSGAFTGV  90

Query  128  NRSRAGYLESADKGILFLDEIDSMPMTLQAKMLRVLESRGVKRLGSTQFTPVDMRVIVAT  187
             RSR GY+E+++ G L+LDEIDSMPM+LQAK+L+VLE+RGV RLGST+F PVD+RVI ++
Sbjct  91   CRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRGVERLGSTEFIPVDLRVIASA  150

Query  188  QTPLLQLVEKGLFRRDLYFRLDTVKIQLPTLRSRSDLILPLFQRFSQEAAVRLKMTLPPM  247
            Q PL +LVE+GLFRRDLYFRL+++ +QLP+LR+R + ILPLF++F+Q  A  +  + P +
Sbjct  151  QRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILPLFDQFTQAIAAEFGRSAPVL  210

Query  248  TAEIHEQLLTHSWPGNIRELKAAADRWALGLSPLAEIQPLLHPR--PLQLKDRLKRIEKF  305
             +   + LL+H W+GNIRELK+AA R  LG+ PL  ++ LL+P      L+ +L+ IEK 
Sbjct  211  DSGRVQLLLSHDWSGNIRELKSAAKRFVLGF-PLLGVE-LLEPEDCDTGLRTQLRVIEKR  268

Query  306  LIQDALRRHDHCIDDVIVELGIPKRTLYHRLKVLNVTAR  344
            LIQDAL+RH H +D V+ EL +P+RTLYHR+K L V+A+
Sbjct  269  LIQDALKRHRHNVDAVLQELELPRRTLYHRMKELGVAAQ  307

11) PC1_2201 in NC_012917


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  276 bits (1032),  Expect = 1e-75, Method: Compositional matrix adjust.
 Identities = 160/279 (58%), Positives = 222/279 (80%), Gaps = 4/279 (1%)

Query  64   LNVDIVLEGETGTGKDTLANRIHRLSRCSGPLVAVNCAAVPENLAESELFGVVSGAYTGA  123
            +++D++L GETGTGKDTLAN IH LS  +GP+V++NCAA+PE+LAES+LFGV SGA+TG 
Sbjct  31   MDMDLLLCGETGTGKDTLANTIHNLSSRTGPFVGMNCAAIPESLAESQLFGVSSGAFTGV  90

Query  124  NRSRAGYLESADKGILFLDEIDSMPMTLQAKMLRVLESRGVKRLGSTQFTPVDMRVIVAT  183
             RSR GY+E+++ G L+LDEIDSMPM+LQAK+L+VLE+RGV RLGST+F PVD+RVI ++
Sbjct  91   CRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRGVERLGSTEFIPVDLRVIASA  150

Query  184  QTPLLQLVEKGLFRRDLYFRLDTVKIQLPTLRSRSDLILPLFQRFSQEAAVRLRMTQPPM  243
            Q PL +LVE+GLFRRDLYFRL+++ +QLP+LR+R + ILPLF++F+Q  A  +  + P +
Sbjct  151  QRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILPLFDQFTQAIAAEFGRSAPVL  210

Query  244  TAEIYEQLLTHSWPGNIRELKAAADRWAMGLSPLAEIQPLLHPR--PLQLKDRLKRIEKF  301
             +   + LL+H W+GNIRELK+AA R  +G+ PL  ++ LL+P      L+ +L+ IEK 
Sbjct  211  DSGRVQLLLSHDWSGNIRELKSAAKRFVLGF-PLLGVE-LLEPEDCDTGLRTQLRVIEKR  268

Query  302  LIQDALRRHGHCIDDVIVELGIPKRTLYHRLKVLNVTVR  340
            LIQDAL+RH H +D V+ EL +P+RTLYHR+K L V+ +
Sbjct  269  LIQDALKRHRHNVDAVLQELELPRRTLYHRMKELGVAAQ  307

12) hrpS in NC_004547


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  276 bits (1032),  Expect = 1e-75, Method: Compositional matrix adjust.
 Identities = 158/279 (57%), Positives = 223/279 (80%), Gaps = 4/279 (1%)

Query  66   LNVDIVLEGETGTGKDTLANRIHQISQCSGPLVAVNCAAVPENLAESELFGVVSGAYTGA  125
            +++D++L GETGTGKDTLAN IH++S  +GP+V++NCAA+PE+LAES+LFGV SGA+TG 
Sbjct  31   MDMDLLLCGETGTGKDTLANTIHNLSSRTGPFVGMNCAAIPESLAESQLFGVSSGAFTGV  90

Query  126  NRSRAGYLESADKGILFLDEIDSMPMTLQAKMLRVLESRGVKRLGSTQFTPVDMRVIVAT  185
             RSR GY+E+++ G L+LDEIDSMPM+LQAK+L+VLE+RGV RLGST+F PVD+RVI ++
Sbjct  91   CRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRGVERLGSTEFIPVDLRVIASA  150

Query  186  QTPLLQLVEKGLFRRDLYFRLDTVKIQLPTLRSRSDLILPLFQRFSQEAAVRLRMTLPPM  245
            Q PL +LVE+GLFRRDLYFRL+++ +QLP+LR+R + ILPLF++F+Q  A  +  + P +
Sbjct  151  QRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILPLFDQFTQAIAAEFGRSAPVL  210

Query  246  TAEIDEQLLTHSWPGNIRELKAAADRWAMGLSPLAEIQQLLHPR--PLQLKDRLKRIEKF  303
             +   + LL+H W+GNIRELK+AA R  +G++ L+   +LL+P      L+ +L+ IEK 
Sbjct  211  DSGRVQLLLSHDWSGNIRELKSAAKRFVLGFPLLG--VELLEPEDCDTGLRTQLRVIEKR  268

Query  304  LIQDALRRHGHCIDDVIVELGIPKRTLYHRLKVLNVTVR  342
            LIQDAL+RH H +D V+ EL +P+RTLYHR+K L V+ +
Sbjct  269  LIQDALKRHRHNVDAVLQELELPRRTLYHRMKELGVAAQ  307

13) Ser39006_2908 in NC_022268


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  275 bits (1029),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 160/281 (57%), Positives = 225/281 (81%), Gaps = 0/281 (0%)

Query  36   LINDIAPLNVDIVLEGETGTGKDTLARRIHKLSGCSGPLVAVNCAAIPESLAESELFGVV  95
            ++ + A +++D++L GETGTGKDTLA  IH+LS+ +GP+V++NCAAIPESLAES+LFGV 
Sbjct  24   VVMNGAIMDMDLLLCGETGTGKDTLANTIHNLSSRTGPFVGMNCAAIPESLAESQLFGVS  83

Query  96   SGAYTGANRSRAGYLETADKGILFLDEIDSMPLTLQAKMLRVLENRGIERLGSTQFKAVD  155
            SGA+TG  RSR GY+E+++ G L+LDEIDSMP++LQAK+L+VLENRG+ERLGST+F +VD
Sbjct  84   SGAFTGVCRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRGVERLGSTEFIPVD  143

Query  156  MRVIVATQTPLSKLVEEGRFRRDLYFRLDTVKIQLPTLRSRIDIILPMFQRFTREASARL  215
            +RVI ++Q PL  LVE+G FRRDLYFRL+++ +QLP+LR+R + ILP+F++FT+  +A +
Sbjct  144  LRVIASAQRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILPLFDQFTQAIAAEF  203

Query  216  KRSSPPIPVSVHERLLTHSWQGNIRELKAAAERWVLGLPPLPMVMETSAQHHPLLKERLR  275
             RS+P +  +  + LL+H W GNIRELK+AA R VLG+P L + +  + + +  L+ +LR
Sbjct  204  GRSAPVLDSGRVQLLLSHDWSGNIRELKSAAKRFVLGFPLLGVELLEPEDCDTGLRTQLR  263

Query  276  RIEKFLIQDALTRNGHCIDDVVTELGIPKRTLYHRIKLLNV  316
             IEK LIQDAL R+ H +D V+ EL +P+RTLYHR+K L V
Sbjct  264  VIEKRLIQDALKRHRHNVDAVLQELELPRRTLYHRMKELGV  304

14) Dd586_1893 in NC_013592


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  273 bits (1023),  Expect = 5e-75, Method: Compositional matrix adjust.
 Identities = 158/281 (57%), Positives = 223/281 (80%), Gaps = 4/281 (1%)

Query  43   LHVDIVLEGETGTGKDTLARRIHQLSGCPGPLVAVNCAAVPETLAESELFGVVSGAYTGA  102
            +++D++L GETGTGKDTLA  IH+LS+  GP+V++NCAA+PE+LAES+LFGV SGA+TG 
Sbjct  31   MDMDLLLCGETGTGKDTLANTIHNLSSRTGPFVGMNCAAIPESLAESQLFGVSSGAFTGV  90

Query  103  SRSRAGYLEIADKGILFLDEIDSMPLTLQAKMLRVLESRGIERLGSTQFKPVNMRVIVAT  162
             RSR GY+E ++ G L+LDEIDSMP++LQAK+L+VLE+RG+ERLGST+F PV++RVI ++
Sbjct  91   CRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRGVERLGSTEFIPVDLRVIASA  150

Query  163  QTPLHKLVEKGRFRRDLYFRLDTVKIQLPTLRSRTEIILPLFQRFLHDAAARLKRPVPGV  222
            Q PL+ LVE+G FRRDLYFRL+++ +QLP+LR+R E ILPLF++F +  AA + R+ P +
Sbjct  151  QRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILPLFDQFTQAIAAEFGRSAPVL  210

Query  223  SAMMQEQLLMHDWPGNIRELKAAAERWVLGLSPVPVAADGGKAGNDTPLTSLKVRLRRIE  282
             +   + LL HDW+GNIRELK+AA R VLG++ + V        +    T+L+ +LR IE
Sbjct  211  DSGRVQLLLSHDWSGNIRELKSAAKRFVLGFPLLGVELLEPEDCD----TGLRTQLRVIE  266

Query  283  RFLIQEALQRNDHCIDNVVHELGIPKRTLYHRIKLLNVAAR  323
            + LIQ+AL+R+ H +D V++EL +P+RTLYHR+K L VAA+
Sbjct  267  KRLIQDALKRHRHNVDAVLQELELPRRTLYHRMKELGVAAQ  307

15) Dd1591_1896 in NC_012912


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  273 bits (1022),  Expect = 7e-75, Method: Compositional matrix adjust.
 Identities = 157/281 (56%), Positives = 226/281 (81%), Gaps = 4/281 (1%)

Query  43   LNVDIVLEGETGTGKDTLARRIHQLSGCAGPLVAVNCAAVPETLAESELFGVVSGAYTGA  102
            +++D++L GETGTGKDTLA  IH+LS+ +GP+V++NCAA+PE+LAES+LFGV SGA+TG 
Sbjct  31   MDMDLLLCGETGTGKDTLANTIHNLSSRTGPFVGMNCAAIPESLAESQLFGVSSGAFTGV  90

Query  103  SRSRAGYLETADKGILFLDEIDSMPLTLQAKMLRVLESRGIERLGSTQFKPVDMRVIVAT  162
             RSR GY+E+++ G L+LDEIDSMP++LQAK+L+VLE+RG+ERLGST+F PVD+RVI ++
Sbjct  91   CRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRGVERLGSTEFIPVDLRVIASA  150

Query  163  QTPLQKLVDEGRFRRDLYFRLDTVKIQLPTLRSRTDIILPLFQRFLHDAAARLKLSVPGV  222
            Q PL+ LV++G FRRDLYFRL+++ +QLP+LR+R + ILPLF++F +  AA +  S P +
Sbjct  151  QRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILPLFDQFTQAIAAEFGRSAPVL  210

Query  223  SVIMQEQLLMHDWPGNIRELKAAAERWVLGLSPVPIVADGDGAESDTPLTSLKVRLRRIE  282
                 + LL HDW+GNIRELK+AA R VLG++ + +    +  E++   T+L+ +LR IE
Sbjct  211  DSGRVQLLLSHDWSGNIRELKSAAKRFVLGFPLLGV----ELLEPEDCDTGLRTQLRVIE  266

Query  283  RFLIQEALQRNDHCIDTVVSELGIPKRTLYHRIKLLNVAAR  323
            + LIQ+AL+R+ H +D+V+ EL +P+RTLYHR+K L VAA+
Sbjct  267  KRLIQDALKRHRHNVDAVLQELELPRRTLYHRMKELGVAAQ  307

16) hrpS in NC_005773


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  272 bits (1017),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 177/274 (65%), Positives = 228/274 (84%), Gaps = 0/274 (0%)

Query  29   LGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESELFGVVSGAYTGA  88
            +++D+LL GETGTGKDT+A+ IH +S+R G +V+MNCAAIPESLAES+LFGV SGA+TG 
Sbjct  31   MDMDLLLCGETGTGKDTLANTIHNLSSRTGPFVGMNCAAIPESLAESQLFGVSSGAFTGV  90

Query  89   DRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVCVIASA  148
             RSR GYIEA++GGTLYLDEIDSMP+SLQAKLL+VLE R++ERLGST  I +D+ VIASA
Sbjct  91   CRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRGVERLGSTEFIPVDLRVIASA  150

Query  149  QSSLDDAVEQGKFRRDLYFRLNVltlqlpplrtqpERILPLFKRFMAAAAKELNVASADV  208
            Q +LD+ VEQG FRRDLYFRLN LTLQLP+LRT+ E+ILPLF +F  A A E+  +++ +
Sbjct  151  QRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILPLFDQFTQAIAAEFGRSAPVL  210

Query  209  CPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQSEEHLACGLKSQLRAIEKALI  268
             +   Q+LL+H+W+GNIRELK+AAKR VLGFP+LGV+    E+   GL++QLR IEK LI
Sbjct  211  DSGRVQLLLSHDWSGNIRELKSAAKRFVLGFPLLGVELLEPEDCDTGLRTQLRVIEKRLI  270

Query  269  QQSLKRHRNCIDAASLELDMPRRTLYRRIKELQI  302
            Q++LKRHR+ +DA   EL++PRRTLY+R+KEL +
Sbjct  271  QDALKRHRHNVDAVLQELELPRRTLYHRMKELGV  304

17) hrpS in NC_016830


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  270 bits (1008),  Expect = 7e-74, Method: Compositional matrix adjust.
 Identities = 155/275 (57%), Positives = 223/275 (82%), Gaps = 1/275 (0%)

Query  32   IDVLLRGETGTGKDTLAEKIHRMSGCSGKFVAINCAAIPETLAESQLFGANTGAFTGASQ  91
            +D+LL GETGTGKDTLA+ IH +S+ +G FV++NCAAIPE+LAESQLFG ++GAFTG  +
Sbjct  33   MDLLLCGETGTGKDTLANTIHNLSSRTGPFVGMNCAAIPESLAESQLFGVSSGAFTGVCR  92

Query  92   NRAGFVEAAHNGTLYLDEIDSMPLGLQAKLLRVLESRTVQRLGSTQNIPVNMRVIASAQC  151
            +R G++EA++ GTLYLDEIDSMP++LQAKLL+VLE+R V+RLGST+ IPV++RVIASAQ 
Sbjct  93   SREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRGVERLGSTEFIPVDLRVIASAQR  152

Query  152  PLGEMVERGEFRRDLYFRLNIISLKLPPLRSRKERIVPLFQSLVRREAQALDRPYVAPSP  211
            PL+E+VE+G FRRDLYFRLN ++L+LP+LR+R+E+I+PLF+ + +  A  ++R+     +
Sbjct  153  PLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILPLFDQFTQAIAAEFGRSAPVLDS  212

Query  212  ALLRQLIGYAWPGNIRELQSAAKRYVLGLPALPRAEQLEHNSSTLKLKEHLQQFEKILIE  271
            + ++ L++  W+GNIREL+SAAKR+VLG+P L   E LE +     L+ +L+ +EK LI+
Sbjct  213  GRVQLLLSHDWSGNIRELKSAAKRFVLGFPLLG-VELLEPEDCDTGLRTQLRVIEKRLIQ  271

Query  272  DCMRRHHHCIDKVIAELGIARRTLYYRMKCLQIST  306
            D ++RH+H +D V+ EL ++RRTLY RMK L +++
Sbjct  272  DALKRHRHNVDAVLQELELPRRTLYHRMKELGVAA  306

18) PSEBR_a5366 in NC_015379


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  269 bits (1007),  Expect = 8e-74, Method: Compositional matrix adjust.
 Identities = 158/283 (56%), Positives = 227/283 (81%), Gaps = 1/283 (0%)

Query  24   VQSVAPLMIDVLLRGETGTGKDTLAEKIHRMSGCSGKFVAINCAAIPETLAESQLFGANT  83
            V + A + +D+LL GETGTGKDTLA+ IH +S+ +G FV++NCAAIPE+LAESQLFG ++
Sbjct  25   VMNGAIMDMDLLLCGETGTGKDTLANTIHNLSSRTGPFVGMNCAAIPESLAESQLFGVSS  84

Query  84   GAFTGANQNRAGFVEAAHNGTLYLDEIDSMPLGLQAKLLRVLESRTVQRLGSTQSIPVNM  143
            GAFTG  ++R G++EA++ GTLYLDEIDSMP++LQAKLL+VLE+R V+RLGST+ IPV++
Sbjct  85   GAFTGVCRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRGVERLGSTEFIPVDL  144

Query  144  RVIASAQCPLGEMVERGEFRRDLYFRLNIISLKLPPLRSRKERIVPLFQSLVRREAQALD  203
            RVIASAQ PL+E+VE+G FRRDLYFRLN ++L+LP+LR+R+E+I+PLF+ + +  A  ++
Sbjct  145  RVIASAQRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILPLFDQFTQAIAAEFG  204

Query  204  RPYVAPSPALLRQLLGYAWPGNIRELQSAAKRYVLGLPALPRAEQLEHNSSTLKLKEHLQ  263
            R+     ++ ++ LL+  W+GNIREL+SAAKR+VLG+P L   E LE +     L+ +L+
Sbjct  205  RSAPVLDSGRVQLLLSHDWSGNIRELKSAAKRFVLGFPLLG-VELLEPEDCDTGLRTQLR  263

Query  264  QFEKILIEDCMRRHHHCIDKVIAELGIARRTLYYRMKCLQIST  306
             +EK LI+D ++RH+H +D V+ EL ++RRTLY RMK L +++
Sbjct  264  VIEKRLIQDALKRHRHNVDAVLQELELPRRTLYHRMKELGVAA  306

19) rspR in NC_012660


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  268 bits (1003),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 163/287 (57%), Positives = 227/287 (80%), Gaps = 0/287 (0%)

Query  19   PDIEEILSGTAQLNIDILLLGETGTGKDTLAQRIHRLSGRRGSFIAVNCAAIPETLAESQ  78
            ++ ++++   A +++D+LL GETGTGKDTLA+ IH LS+R G+F+++NCAAIPE+LAESQ
Sbjct  19   SEGHQVVMNGAIMDMDLLLCGETGTGKDTLANTIHNLSSRTGPFVGMNCAAIPESLAESQ  78

Query  79   LFGVNSGAYTGAVQSRAGFIEAAHLGTLYLDEIDSMPLSLQAKLLRTLESRGVERLGSTR  138
            LFGV+SGA+TG  +SR G+IEA++ GTLYLDEIDSMP+SLQAKLL+ LE+RGVERLGST 
Sbjct  79   LFGVSSGAFTGVCRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRGVERLGSTE  138

Query  139  FIPVDMRVIASAQQSLYEMVERGTFRRDLYFRLSVVNIQLPSLRECRDRIIPLFLTMIRQ  198
            FIPVD+RVIASAQ++L E+VE+G FRRDLYFRL+ + +QLP+LR  R++I+PLF    + 
Sbjct  139  FIPVDLRVIASAQRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILPLFDQFTQA  198

Query  199  EAESFKCPYpqppssllqqllCHPWPGNVRELSSTAKRFVLGLPPLSVRGKNPKISEASL  258
             A  F  + P   S+ +Q LL H W+GN+REL S+AKRFVLG+P L+V   +P   +++L
Sbjct  199  IAAEFGRSAPVLDSGRVQLLLSHDWSGNIRELKSAAKRFVLGFPLLGVELLEPEDCDTGL  258

Query  259  KERLQRIEKSLIEESLHRHNGNVDLAAADLRVAKRTFYYRMKQLGID  305
            + +L+ IEK LI+++L RH  NVD    +L +++RT+Y RMK+LG+ 
Sbjct  259  RTQLRVIEKRLIQDALKRHRHNVDAVLQELELPRRTLYHRMKELGVA  305

20) hrpS in NC_017390


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  263 bits (982),  Expect = 9e-72, Method: Compositional matrix adjust.
 Identities = 157/289 (55%), Positives = 218/289 (76%), Gaps = 11/289 (3%)

Query  36   EMIKTVAPLKIDLVLEGETGTGKDTLARKIHQLSGCKGKLVAVNCAAIPETLAESELFGI  95
            +++   A + +DL+L GETGTGKDTLA  IH+LS+  G +V++NCAAIPE+LAES+LFG+
Sbjct  23   QVVMNGAIMDMDLLLCGETGTGKDTLANTIHNLSSRTGPFVGMNCAAIPESLAESQLFGV  82

Query  96   NNGAYTGAGQARAGYVEAADNGILFLDEIDSMPLSLQAKMLRVLENRGVERLGGTQFTPV  155
            ++GA+TG  ++R GY+EA++ G L+LDEIDSMP+SLQAK+L+VLENRGVERLG+T+F PV
Sbjct  83   SSGAFTGVCRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRGVERLGSTEFIPV  142

Query  156  NMRVIVATQTPLLTLVERGSFRRDLYFRLNTVSIQLQPLRARIEVIIPLFRSFIQKAAST  215
            ++RVI ++Q PL  LVE+G FRRDLYFRLN++++QL +LR+R E I+PLF  F Q  A+ 
Sbjct  143  DLRVIASAQRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILPLFDQFTQAIAAE  202

Query  216  LQCAPREITQEHYECLLSYSWPGNIRELKAAAERFVLGLPPLGL------SCHCGQERPQ  269
            +  ++  +   + + LLS  W+GNIRELK+AA RFVLG+P LG+       C+ G     
Sbjct  203  FGRSAPVLDSGRVQLLLSHDWSGNIRELKSAAKRFVLGFPLLGVELLEPEDCDTG-----  257

Query  270  LKELMRRIEKNVIHDCLVRHGHSIDDAAQELGIPLRTLYHRIKLLNVAT  318
            L+  +R IEK +I+D L RH H++D   QEL +P RTLYHR+K L VA+
Sbjct  258  LRTQLRVIEKRLIQDALKRHRHNVDAVLQELELPRRTLYHRMKELGVAA  306

21) hrpS in NC_012214


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  263 bits (982),  Expect = 9e-72, Method: Compositional matrix adjust.
 Identities = 157/289 (55%), Positives = 218/289 (76%), Gaps = 11/289 (3%)

Query  36   EMIKTVAPLKIDLVLEGETGTGKDTLARKIHQLSGCKGKLVAVNCAAIPETLAESELFGI  95
            +++   A + +DL+L GETGTGKDTLA  IH+LS+  G +V++NCAAIPE+LAES+LFG+
Sbjct  23   QVVMNGAIMDMDLLLCGETGTGKDTLANTIHNLSSRTGPFVGMNCAAIPESLAESQLFGV  82

Query  96   NNGAYTGAGQARAGYVEAADNGILFLDEIDSMPLSLQAKMLRVLENRGVERLGGTQFTPV  155
            ++GA+TG  ++R GY+EA++ G L+LDEIDSMP+SLQAK+L+VLENRGVERLG+T+F PV
Sbjct  83   SSGAFTGVCRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRGVERLGSTEFIPV  142

Query  156  NMRVIVATQTPLLTLVERGSFRRDLYFRLNTVSIQLQPLRARIEVIIPLFRSFIQKAAST  215
            ++RVI ++Q PL  LVE+G FRRDLYFRLN++++QL +LR+R E I+PLF  F Q  A+ 
Sbjct  143  DLRVIASAQRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILPLFDQFTQAIAAE  202

Query  216  LQCAPREITQEHYECLLSYSWPGNIRELKAAAERFVLGLPPLGL------SCHCGQERPQ  269
            +  ++  +   + + LLS  W+GNIRELK+AA RFVLG+P LG+       C+ G     
Sbjct  203  FGRSAPVLDSGRVQLLLSHDWSGNIRELKSAAKRFVLGFPLLGVELLEPEDCDTG-----  257

Query  270  LKELMRRIEKNVIHDCLVRHGHSIDDAAQELGIPLRTLYHRIKLLNVAT  318
            L+  +R IEK +I+D L RH H++D   QEL +P RTLYHR+K L VA+
Sbjct  258  LRTQLRVIEKRLIQDALKRHRHNVDAVLQELELPRRTLYHRMKELGVAA  306

22) hrpS in NC_017445


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  262 bits (978),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 157/289 (55%), Positives = 217/289 (76%), Gaps = 11/289 (3%)

Query  15   EMIKTVAPLKIDLVLEGETGTGKDTLARKIHQLSGCKGKLVAVNCAAIPETLAESELFGI  74
            +++   A + +DL+L GETGTGKDTLA  IH+LS+  G +V++NCAAIPE+LAES+LFG+
Sbjct  23   QVVMNGAIMDMDLLLCGETGTGKDTLANTIHNLSSRTGPFVGMNCAAIPESLAESQLFGV  82

Query  75   NNGAYTGAGQARAGYVEAADNGILFLDEIDSMPLSLQAKMLRVLENRGVERLGGTRFTPV  134
            ++GA+TG  ++R GY+EA++ G L+LDEIDSMP+SLQAK+L+VLENRGVERLG+T F PV
Sbjct  83   SSGAFTGVCRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRGVERLGSTEFIPV  142

Query  135  NMRVIVATQTPLLTLVERGSFRRDLYFRLNTVSIQLQPLRARIEVIIPLFRSFIQKAAST  194
            ++RVI ++Q PL  LVE+G FRRDLYFRLN++++QL +LR+R E I+PLF  F Q  A+ 
Sbjct  143  DLRVIASAQRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILPLFDQFTQAIAAE  202

Query  195  LQCAPREITQEHYECLLSYSWPGNIRELKAAAERFVLGLPPLGL------SCHCGQERPQ  248
            +  ++  +   + + LLS  W+GNIRELK+AA RFVLG+P LG+       C+ G     
Sbjct  203  FGRSAPVLDSGRVQLLLSHDWSGNIRELKSAAKRFVLGFPLLGVELLEPEDCDTG-----  257

Query  249  LKELMRRIEKNVIHDCLVRHGHSIDDAAQELGIPLRTLYHRIKLLNVAT  297
            L+  +R IEK +I+D L RH H++D   QEL +P RTLYHR+K L VA+
Sbjct  258  LRTQLRVIEKRLIQDALKRHRHNVDAVLQELELPRRTLYHRMKELGVAA  306

23) hrpS in NC_010694


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  259 bits (967),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 156/287 (55%), Positives = 218/287 (76%), Gaps = 7/287 (2%)

Query  36   EMIKTVAPLKIDLVLEGETGTGKDTLARKIHQLSGCSGKLVAVNCAAIPETLAESELFGI  95
            +++   A + +DL+L GETGTGKDTLA  IH+LS+ +G +V++NCAAIPE+LAES+LFG+
Sbjct  23   QVVMNGAIMDMDLLLCGETGTGKDTLANTIHNLSSRTGPFVGMNCAAIPESLAESQLFGV  82

Query  96   NNGAYTGAGQARAGYVEAAHNGILFLDEIDSMPLSLQAKMLRVLENRGVERLGGTRFTPV  155
            ++GA+TG  ++R GY+EA++ G L+LDEIDSMP+SLQAK+L+VLENRGVERLG+T F PV
Sbjct  83   SSGAFTGVCRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRGVERLGSTEFIPV  142

Query  156  NMRVIVATQTPLLTLVERGSFRRDLYFRLNTVSIQLQPLRARIEIIIPLFRYFIQQAATT  215
            ++RVI ++Q PL  LVE+G FRRDLYFRLN++++QL +LR+R E I+PLF  F Q  A+ 
Sbjct  143  DLRVIASAQRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILPLFDQFTQAIAAE  202

Query  216  LQCPQREITQEHYECLLSYGWPGNIRELKAAAERFVLGLPPLGF----SCHCEDERPRLK  271
            +  +   +   + + LLS +W+GNIRELK+AA RFVLG+P LG     + +C+     L+
Sbjct  203  FGRSAPVLDSGRVQLLLSHDWSGNIRELKSAAKRFVLGFPLLGVELLEPEDCDTG---LR  259

Query  272  EMMRRIEKSLIHDCLLRHGHSIDDAAQELGIPLRTLYHRIKLLNVTT  318
              +R IEK LI+D L RH H++D   QEL +P RTLYHR+K L V++
Sbjct  260  TQLRVIEKRLIQDALKRHRHNVDAVLQELELPRRTLYHRMKELGVAA  306

24) hrpS in NC_013971


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  256 bits (955),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 154/287 (54%), Positives = 216/287 (76%), Gaps = 7/287 (2%)

Query  36   EMIKTVAPLKIDLVLEGETGTGKDTLARKIHQLSGCRGKLVAVNCAAIPETLAESELFGI  95
            +++   A + +DL+L GETGTGKDTLA  IH+LS+  G +V++NCAAIPE+LAES+LFG+
Sbjct  23   QVVMNGAIMDMDLLLCGETGTGKDTLANTIHNLSSRTGPFVGMNCAAIPESLAESQLFGV  82

Query  96   NNGAYTGAGQARAGYVEAADNGILFLDEIDSMPLSLQAKMLRVLENRGVERLGGTRFTPV  155
            ++GA+TG  ++R GY+EA++ G L+LDEIDSMP+SLQAK+L+VLENRGVERLG+T F PV
Sbjct  83   SSGAFTGVCRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRGVERLGSTEFIPV  142

Query  156  NMRVIVATQTPLLTLVERGSFRRDLYFRLNTVSIQLQPLRARIEVIIPMFRSFIQKAAST  215
            ++RVI ++Q PL  LVE+G FRRDLYFRLN++++QL +LR+R E I+P+F  F Q  A+ 
Sbjct  143  DLRVIASAQRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILPLFDQFTQAIAAE  202

Query  216  LQCAPREITQEHYECLLSYSWPGNIRELKAAAERFVLGLPPLDL----PCHCGQERPQLK  271
            +  ++  +   + + LLS  W+GNIRELK+AA RFVLG+P L++    P +C+     L+
Sbjct  203  FGRSAPVLDSGRVQLLLSHDWSGNIRELKSAAKRFVLGFPLLGVELLEPEDCD---TGLR  259

Query  272  ELMRRIEKNVIYDCLVRHGHSIDDAAQELGIPLRTLYHRIKLLNVNT  318
              +R IEK +I D L RH H++D   QEL +P RTLYHR+K L V +
Sbjct  260  TQLRVIEKRLIQDALKRHRHNVDAVLQELELPRRTLYHRMKELGVAA  306

25) hrpS in NC_013961


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  256 bits (955),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 154/287 (54%), Positives = 216/287 (76%), Gaps = 7/287 (2%)

Query  36   EMIKTVAPLKIDLVLEGETGTGKDTLARKIHQLSGCRGKLVAVNCAAIPETLAESELFGI  95
            +++   A + +DL+L GETGTGKDTLA  IH+LS+  G +V++NCAAIPE+LAES+LFG+
Sbjct  23   QVVMNGAIMDMDLLLCGETGTGKDTLANTIHNLSSRTGPFVGMNCAAIPESLAESQLFGV  82

Query  96   NNGAYTGAGQARAGYVEAADNGILFLDEIDSMPLSLQAKMLRVLENRGVERLGGTRFTPV  155
            ++GA+TG  ++R GY+EA++ G L+LDEIDSMP+SLQAK+L+VLENRGVERLG+T F PV
Sbjct  83   SSGAFTGVCRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRGVERLGSTEFIPV  142

Query  156  NMRVIVATQTPLLTLVERGSFRRDLYFRLNTVSIQLQPLRARIEVIIPMFRSFIQKAAST  215
            ++RVI ++Q PL  LVE+G FRRDLYFRLN++++QL +LR+R E I+P+F  F Q  A+ 
Sbjct  143  DLRVIASAQRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILPLFDQFTQAIAAE  202

Query  216  LQCAPREITQEHYECLLSYSWPGNIRELKAAAERFVLGLPPLDL----PCHCGQERPQLK  271
            +  ++  +   + + LLS  W+GNIRELK+AA RFVLG+P L++    P +C+     L+
Sbjct  203  FGRSAPVLDSGRVQLLLSHDWSGNIRELKSAAKRFVLGFPLLGVELLEPEDCD---TGLR  259

Query  272  ELMRRIEKNVIYDCLVRHGHSIDDAAQELGIPLRTLYHRIKLLNVNT  318
              +R IEK +I D L RH H++D   QEL +P RTLYHR+K L V +
Sbjct  260  TQLRVIEKRLIQDALKRHRHNVDAVLQELELPRRTLYHRMKELGVAA  306

26) D781_3924 in NC_020064


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  246 bits (917),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 153/286 (54%), Positives = 217/286 (76%), Gaps = 3/286 (1%)

Query  42   HKLTKIVAPLHVDVLLEGETGTGKDTLARRIYELSGGNGPFVPVNCGAIPESLAESELFG  101
            H++    A +++D+LL GETGTGKDTLA  I +LS+  GPFV +NC+AIPESLAES+LFG
Sbjct  22   HQVVMNGAIMDMDLLLCGETGTGKDTLANTIHNLSSRTGPFVGMNCAAIPESLAESQLFG  81

Query  102  VEAGAYTGASHARAGYLETANNGILFLDEIDSMPLTVQAKLLRVLETRTITRLGSTKPIS  161
            V +GA+TG  ++R GY+E++N G L+LDEIDSMP+++QAKLL+VLE R + RLGST  I+
Sbjct  82   VSSGAFTGVCRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRGVERLGSTEFIP  141

Query  162  LHLRVIVAAQTPLEQLVEAGRFRRDLCFRLNTIKLETPTLRSRPELIIPLFRRFAIESAL  221
            ++LRVI +AQ PL++LVE G FRRDL FRLN++ L+ P+LR+R E I+PLF +F+   A 
Sbjct  142  VDLRVIASAQRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILPLFDQFTQAIAA  201

Query  222  RLGMPHPPRSTALDEALLLHCWPGNLRELKAAAERFILGLPPLNQAL--PQESGAVLLKE  279
             +G + P   ++  + LL H W+GN+RELK+AA RF+LG+P L   L  P++ ++  L+ 
Sbjct  202  EFGRSAPVLDSGRVQLLLSHDWSGNIRELKSAAKRFVLGFPLLGVELLEPEDCDTG-LRT  260

Query  280  RLKRIERSLIHDCLhrhdhriddvvhELGIPRRTLYHRLKQLNIHA  325
            +L+ IE+ LI+D L RH H +D V++EL +PRRTLYHR+K+L + A
Sbjct  261  QLRVIEKRLIQDALKRHRHNVDAVLQELELPRRTLYHRMKELGVAA  306

27) H045_00470 in NC_020209


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  237 bits (885),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 147/240 (62%), Positives = 198/240 (83%), Gaps = 0/240 (0%)

Query  1    MNCAAIPESLAESQLFGVNSGAFTGAMQSRAGFVEAAHLGTLYLDEIDSMPLSLQAKLLR  60
            MNCAAIPESLAESQLFGV+SGAFTG  +SR G++EA++ GTLYLDEIDSMP+SLQAKLL+
Sbjct  65   MNCAAIPESLAESQLFGVSSGAFTGVCRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLH  124

Query  61   VLESRGVERLGSTRFIPVDMRVIASAQHSLHAMVEQGTFRRDLFFRLNVVTIQLPALRDQ  120
            VLE+RGVERLGST FIPVD+RVIASAQ++L+ +VEQG FRRDL+FRLN +T+QLPALR +
Sbjct  125  VLENRGVERLGSTEFIPVDLRVIASAQRPLDELVEQGLFRRDLYFRLNALTLQLPALRTR  184

Query  121  RERIVPLFLQMVRQEAELFECPAPTPTAELLQQLLCQSWLGNIRELRSTAKRFVlglppl  180
            RE+I+PLF Q  +  A  F  +AP   +  +Q LL + W GNIREL+S+AKRFVLG+P L
Sbjct  185  REQILPLFDQFTQAIAAEFGRSAPVLDSGRVQLLLSHDWSGNIRELKSAAKRFVLGFPLL  244

Query  181  spplsKPQGNEMSLKARLQEIEKALIEESMQRNDRCVDRVAIEMGIAKRTLYHRMKQLAI  240
            +  L  P++ + +L+++L+ IEK LI+++++R+ + VD V  E+ +++RTLYHRMK+L++
Sbjct  245  GVELLEPEDCDTGLRTQLRVIEKRLIQDALKRHRHNVDAVLQELELPRRTLYHRMKELGV  304

28) dctD in NC_011983


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  197 bits (732),  Expect = 5e-52, Method: Compositional matrix adjust.
 Identities = 121/277 (44%), Positives = 191/277 (69%), Gaps = 4/277 (1%)

Query  24   DVDVLVTGETGSGKEVVASLLHRWSRRAKGNFVALNCGALPETVIESELFGHEPGAFTGA  83
            D+D+L+ GETG+GK+ +A+ +H  S R+ G FV++NC+A+PE++ ES+LFG  +GAFTG 
Sbjct  32   DMDLLLCGETGTGKDTLANTIHNLSSRT-GPFVGMNCAAIPESLAESQLFGVSSGAFTGV  90

Query  84   QKKRIGRIEHASAGTLFLDEIESMPPAVQVQLLRVLEMREVTPLGTNEVRPVDLRVVAAA  143
             + R G IE +++GTL+LDEI+SMP ++Q +LL+VLE R V  LG+ E  PVDLRV+A+A
Sbjct  91   CRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRGVERLGSTEFIPVDLRVIASA  150

Query  144  KVDLGDPRQRGDFREDLYYRLNVVTISIPPLRDRRDDIPLLFGYFAERAASRFKRDVPTM  203
            +  L++  ++G FR DLY+RLN +T+ +P+LR RR++I  LF+ F++  A+ F R  P +
Sbjct  151  QRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILPLFDQFTQAIAAEFGRSAPVL  210

Query  204  STAIRRHLQHHDWPGNVRELSHFAERFVLGLESAAGSKPGETPSTDTVLPLPARVERYEA  263
             ++  + L  HDW+GN+REL   A RFVLG+ +  G    E    DT L    RV   E 
Sbjct  211  DSGRVQLLLSHDWSGNIRELKSAAKRFVLGF-PLLGVELLEPEDCDTGLRTQLRV--IEK  267

Query  264  DLIRETLAQNGGDVRRTIEALGIPRKTFYDKLQRHGI  300
             LI+++L ++  +V   ++ L +PR+T+Y++++  G+
Sbjct  268  RLIQDALKRHRHNVDAVLQELELPRRTLYHRMKELGV  304

29) Sden_3661 in NC_007954


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  179 bits (665),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 128/318 (41%), Positives = 205/318 (65%), Gaps = 32/318 (10%)

Query  114  IVAAPVSRQLLMLAHRAATTEATVLLTGESGTGKEPLANYIHRHSSRAHKPFIAINCAAI  173
            I A + ++Q++M    +A  +  +LL GE+GTGK+ LAN IH  SSR+  PF+++NCAAI
Sbjct  15   ITAQSEGHQVVM---NGAIMDMDLLLCGETGTGKDTLANTIHNLSSRT-GPFVGMNCAAI  70

Query  174  PETMLESILFGHTKGAFTGASSDKAGKFEQANGGSLLLDEIAEMPLALQAKLLRVLQERE  233
            PE++ ES LFG + GAFTG    + G +E +NGG+L LDEI  MP++LQAKLL+VL++R 
Sbjct  71   PESLAESQLFGVSSGAFTGVCRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRG  130

Query  234  VERLGGSQAIPLDIRVIAATNKDLRQAVENGTFREDLFYRLDVLPLKIFPLRDRKTDILP  293
            VERLG+++ IP+D+RVIA++++ L + VE+G FR DL++RL+ L L++ +LR R+ +ILP
Sbjct  131  VERLGSTEFIPVDLRVIASAQRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILP  190

Query  294  LAEHFLHRFDTQGVECYFSRQAR-------EALLAYDWPGNVRELENCIQRALVMRRGQA  346
            L ++F     TQ++   F+R A        + LL+ DW+GN+REL +  +R ++   G +
Sbjct  191  LFDQF-----TQAIAAEFGRSAPVLDSGRVQLLLSHDWSGNIRELKSAAKRFVL---GFP  242

Query  347  IQAAELGLSVGCEIQLPESHSPISGLKESKRQAEFQFIVDILRRVQGNRSQTAAELGMTT  406
            + + EL  + +C+          +GL+   R  E ++I D L+R + N      EL +  
Sbjct  243  LLGVELLEPEDCD----------TGLRTQLRVIEKRLIQDALKRHRHNVDAVLQELELPR  292

Query  407  RALRYKLAQMRDAGIDVD  424
            R+L Y   +M++ G+  +
Sbjct  293  RTL-YH--RMKELGVAAQ  307

30) Ssed_0079 in NC_009831


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  174 bits (644),  Expect = 8e-45, Method: Compositional matrix adjust.
 Identities = 127/313 (41%), Positives = 197/313 (63%), Gaps = 20/313 (6%)

Query  114  VVSSTVSRQLLMLAHRAATTEASVLLTGESGTGKEPIARYIHQNSNRANQPFIAVNCAAI  173
            + + + ++Q++M    +A  +  +LL GE+GTGK+ +A  IH+ S+R+  PF+++NCAAI
Sbjct  15   ITAQSEGHQVVM---NGAIMDMDLLLCGETGTGKDTLANTIHNLSSRTG-PFVGMNCAAI  70

Query  174  PESILESILFGHVKGAFTGASSDQPGKFELANGGTLLLDEIGEMPFILQSKLLRVLQERE  233
            PES+ ES LFG   GAFTG    + G +E +NGGTL LDEI+ MP  LQ+KLL+VL++R 
Sbjct  71   PESLAESQLFGVSSGAFTGVCRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRG  130

Query  234  VERLGGHRSIPLNIRVIASTNKDLRKAVKSGEFREDLFYRLDVLPLKISPLRERREDILP  293
            VERLG+   IP+++RVIAS+++ L   V  G FR DL++RL+ L L++++LR RRE+ILP
Sbjct  131  VERLGSTEFIPVDLRVIASAQRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILP  190

Query  294  LAEHFLQRYKQLSDNQACYFSEAAQQRLLSHDWPGNVRELENTIQRALVMRRGQALQAAE  353
            L ++F Q      +  A  +  +  Q LLSHDW+GN+REL ++ +R ++   G +L + E
Sbjct  191  LFDQFTQAIAAEFGRSAPVLDSGRVQLLLSHDWSGNIRELKSAAKRFVL---GFPLLGVE  247

Query  354  LGIESKEHHAKVRVESSEQGLKASKRQAEFQYILDTLKRFNGHRSQSAQSLGMTTRALRY  413
            L          +  E  + GL++  R  E + I D+LKR   +     Q L +  R+L Y
Sbjct  248  L----------LEPEDCDTGLRTQLRVIEKRLIQDALKRHRHNVDAVLQELELPRRTL-Y  296

Query  414  KLVQMREEGIDIE  426
               +M+E G+  +
Sbjct  297  H--RMKELGVAAQ  307

31) Sputcn32_3478 in NC_009438


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  169 bits (624),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 127/314 (41%), Positives = 198/314 (64%), Gaps = 20/314 (6%)

Query  114  VVSASVSRQLLMLAHRAATTEASVLLLGESGTGKEPLARYIHRHSSRSHKPFIAINCAAI  173
            + + S ++Q++M    +A  +  +LL GE+GTGK+ LA  IH  SSR+  PF+++NCAAI
Sbjct  15   ITAQSEGHQVVM---NGAIMDMDLLLCGETGTGKDTLANTIHNLSSRT-GPFVGMNCAAI  70

Query  174  PESILESVLFGHVKGAFTGAICDKAGKFEQANGGTLLLDEIGEMPLTLQAKLLRVLQERE  233
            PES+ ES LFG   GAFTG    + G +E +NGGTL LDEI+ MP++LQAKLL+VL++R 
Sbjct  71   PESLAESQLFGVSSGAFTGVCRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRG  130

Query  234  VERLGGQHAIALDIRIIASTNRDLRQAVELGHFREDLFYRLDVLPLKISPLRDRKADILP  293
            VERLG+ + I++D+R+IAS++R L + VE G FR DL++RL+ L L++++LR R+ +ILP
Sbjct  131  VERLGSTEFIPVDLRVIASAQRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILP  190

Query  294  LAEHFLDLYHQPDTTSTCYFSEHAKQALVSYDWPGNVRELENCIQRALVMRRGLAIQAAD  353
            L ++F +        S+  +     Q L+S DW+GN+REL +  +R +            
Sbjct  191  LFDQFTQAIAAEFGRSAPVLDSGRVQLLLSHDWSGNIRELKSAAKRFV------------  238

Query  354  LGLNIQLEVQAVEHPEVTDGLRASKQQAEFQYIIDVLKRFNGQRTLSAQALGMTTRALRY  413
            LG+ + L V+ +E  +   GLR+  +  E + I D LKR   +     Q L +  R+L Y
Sbjct  239  LGFPL-LGVELLEPEDCDTGLRTQLRVIEKRLIQDALKRHRHNVDAVLQELELPRRTL-Y  296

Query  414  RLVQMREAGIDIEM  427
            +  +M+E G+  ++
Sbjct  297  H--RMKELGVAAQI  308

32) Sputw3181_0461 in NC_008750


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  169 bits (624),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 127/314 (41%), Positives = 198/314 (64%), Gaps = 20/314 (6%)

Query  114  VVSASVSRQLLMLAHRAATTEASVLLLGESGTGKEPLARYIHRHSSRSHKPFIAINCAAI  173
            + + S ++Q++M    +A  +  +LL GE+GTGK+ LA  IH  SSR+  PF+++NCAAI
Sbjct  15   ITAQSEGHQVVM---NGAIMDMDLLLCGETGTGKDTLANTIHNLSSRT-GPFVGMNCAAI  70

Query  174  PESILESVLFGHVKGAFTGAICDKAGKFEQANGGTLLLDEIGEMPLTLQAKLLRVLQERE  233
            PES+ ES LFG   GAFTG    + G +E +NGGTL LDEI+ MP++LQAKLL+VL++R 
Sbjct  71   PESLAESQLFGVSSGAFTGVCRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRG  130

Query  234  VERLGGQHAIALDIRIIASTNRDLRQAVELGHFREDLFYRLDVLPLKISPLRDRKADILP  293
            VERLG+ + I++D+R+IAS++R L + VE G FR DL++RL+ L L++++LR R+ +ILP
Sbjct  131  VERLGSTEFIPVDLRVIASAQRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILP  190

Query  294  LAEHFLDLYHQPDTTSTCYFSEHAKQALVSYDWPGNVRELENCIQRALVMRRGLAIQAAD  353
            L ++F +        S+  +     Q L+S DW+GN+REL +  +R +            
Sbjct  191  LFDQFTQAIAAEFGRSAPVLDSGRVQLLLSHDWSGNIRELKSAAKRFV------------  238

Query  354  LGLNIQLEVQAVEHPEVTDGLRASKQQAEFQYIIDVLKRFNGQRTLSAQALGMTTRALRY  413
            LG+ + L V+ +E  +   GLR+  +  E + I D LKR   +     Q L +  R+L Y
Sbjct  239  LGFPL-LGVELLEPEDCDTGLRTQLRVIEKRLIQDALKRHRHNVDAVLQELELPRRTL-Y  296

Query  414  RLVQMREAGIDIEM  427
            +  +M+E G+  ++
Sbjct  297  H--RMKELGVAAQI  308

33) Hsero_0949 in NC_014323


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  166 bits (615),  Expect = 1e-42, Method: Compositional matrix adjust.
 Identities = 111/271 (41%), Positives = 182/271 (68%), Gaps = 11/271 (4%)

Query  70   DANVVIIGATGTGKELIARHVHELSQRRDAPFVAVNCGAFSESLAESELFGHEKGAFTGA  129
            D ++++ G TGTGK+ +A  +H+LS R  +PFV++NC+A++ESLAES+LFG   GAFTG 
Sbjct  32   DMDLLLCGETGTGKDTLANTIHNLSSR-TGPFVGMNCAAIPESLAESQLFGVSSGAFTGV  90

Query  130  ITHKPGWFEAANGGTLFLDEIGDLPLAIQVKLLRVLQEREVVRLGSRRSIPIDVRIIAAT  189
               + G +EA+NGGTL+LDEI+ +P+++Q KLL+VL++R V RLGS   IP+D+R+IA++
Sbjct  91   CRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRGVERLGSTEFIPVDLRVIASA  150

Query  190  NVRLQDAVAAGHFRQDLYYRLQVVQLAIPRLRERPLDILPLAYHFLHEYRQRLGYGAARI  249
            +  L++ V  G FR+DLY+RL+ + L +P LR R  +ILPL  +F +     +G +A+ +
Sbjct  151  QRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILPLFDQFTQAIAAEFGRSAPVL  210

Query  250  DGEGERKLRQHDWPGNIRELENAIHH-----ALLICQ----DDCLRAEHFHLSHVERRL-  299
            D+   + L  HDW+GNIREL +A  +     +LL  +    +DC  + + +L  +E+RL 
Sbjct  211  DSGRVQLLLSHDWSGNIRELKSAAKRFVLGFPLLGVELLEPEDCDTGLRTQLRVIEKRLI  270

Query  300  DYAVAAADERGNDPLHALEQALQGLFNQSQE  330
            + A+    +  +  L+ LE + + L+++ +E
Sbjct  271  QDALKRHRHNVDAVLQELELPRRTLYHRMKE  301

34) Sbal117_4139 in NC_017579


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  166 bits (613),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 127/313 (41%), Positives = 196/313 (63%), Gaps = 20/313 (6%)

Query  114  VVSAAVSRQLLMLAHRAATTEASVLLLGESGTGKEPLARYIHRHSSRSHKPFVAINCAAI  173
            + + + ++Q++M    +A  +  +LL GE+GTGK+ LA  IH  SSR+  PFV++NCAAI
Sbjct  15   ITAQSEGHQVVM---NGAIMDMDLLLCGETGTGKDTLANTIHNLSSRT-GPFVGMNCAAI  70

Query  174  PESILESVLFGHVKGAFTGAICDKAGKFEQANGGTLLLDEIGEMPLPLQAKLLRVLQERE  233
            PES+ ES LFG   GAFTG    + G +E +NGGTL LDEI+ MP++LQAKLL+VL++R 
Sbjct  71   PESLAESQLFGVSSGAFTGVCRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRG  130

Query  234  VERLGGQHAIPLDIRIIASTNRDLRQAVEFGHFREDLFYRLDVLPLKIAPLRERKADILP  293
            VERLG+ + IP+D+R+IAS++R L + VE G FR DL++RL+ L L++++LR R+ +ILP
Sbjct  131  VERLGSTEFIPVDLRVIASAQRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILP  190

Query  294  LAEHFLGLYGQSDNASRCYFSEHARQVLVTYDWPGNVRELENCIQRALVMRRGQAIQVAE  353
            L ++F    +     S   +     Q+L++ DW+GN+REL +  +R +            
Sbjct  191  LFDQFTQAIAAEFGRSAPVLDSGRVQLLLSHDWSGNIRELKSAAKRFV------------  238

Query  354  LGLNIQEETLELEPLGATVGLKASKQQAEFQYIIDVLKRFNGQRTLSAQALGMTTRALRY  413
            LG+ +    L LEP +   GL++  +  E + I D LKR   +     Q L +  R+L Y
Sbjct  239  LGFPLLGVEL-LEPEDCDTGLRTQLRVIEKRLIQDALKRHRHNVDAVLQELELPRRTL-Y  296

Query  414  RLVQMREAGIDIE  426
            +  +M+E G+  +
Sbjct  297  H--RMKELGVAAQ  307

35) Sbal_3981 in NC_009052


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  166 bits (613),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 127/313 (41%), Positives = 196/313 (63%), Gaps = 20/313 (6%)

Query  114  VVSAAVSRQLLMLAHRAATTEASVLLLGESGTGKEPLARYIHRHSSRSHKPFVAINCAAI  173
            + + + ++Q++M    +A  +  +LL GE+GTGK+ LA  IH  SSR+  PFV++NCAAI
Sbjct  15   ITAQSEGHQVVM---NGAIMDMDLLLCGETGTGKDTLANTIHNLSSRT-GPFVGMNCAAI  70

Query  174  PESILESVLFGHVKGAFTGAICDKAGKFEQANGGTLLLDEIGEMPLPLQAKLLRVLQERE  233
            PES+ ES LFG   GAFTG    + G +E +NGGTL LDEI+ MP++LQAKLL+VL++R 
Sbjct  71   PESLAESQLFGVSSGAFTGVCRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRG  130

Query  234  VERLGGQHAIPLDIRIIASTNRDLRQAVEFGHFREDLFYRLDVLPLKIAPLRERKADILP  293
            VERLG+ + IP+D+R+IAS++R L + VE G FR DL++RL+ L L++++LR R+ +ILP
Sbjct  131  VERLGSTEFIPVDLRVIASAQRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILP  190

Query  294  LAEHFLGLYGQSDNASRCYFSEHARQVLVTYDWPGNVRELENCIQRALVMRRGQAIQVAE  353
            L ++F    +     S   +     Q+L++ DW+GN+REL +  +R +            
Sbjct  191  LFDQFTQAIAAEFGRSAPVLDSGRVQLLLSHDWSGNIRELKSAAKRFV------------  238

Query  354  LGLNIQEETLELEPLGATVGLKASKQQAEFQYIIDVLKRFNGQRTLSAQALGMTTRALRY  413
            LG+ +    L LEP +   GL++  +  E + I D LKR   +     Q L +  R+L Y
Sbjct  239  LGFPLLGVEL-LEPEDCDTGLRTQLRVIEKRLIQDALKRHRHNVDAVLQELELPRRTL-Y  296

Query  414  RLVQMREAGIDIE  426
            +  +M+E G+  +
Sbjct  297  H--RMKELGVAAQ  307

36) Sbal175_0429 in NC_017571


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  165 bits (611),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 127/313 (41%), Positives = 196/313 (63%), Gaps = 20/313 (6%)

Query  114  VVSAAVSRQLLMLAHRAATTEASVLLLGESGTGKEPLARYIHRHSSRSHKPFVAINCAAI  173
            + + + ++Q++M    +A  +  +LL GE+GTGK+ LA  IH  SSR+  PFV++NCAAI
Sbjct  15   ITAQSEGHQVVM---NGAIMDMDLLLCGETGTGKDTLANTIHNLSSRT-GPFVGMNCAAI  70

Query  174  PESILESVLFGHVKGAFTGAICDKAGKFEQANGGTLLLDEIGEMPLPLQAKLLRVLQERE  233
            PES+ ES LFG   GAFTG    + G +E +NGGTL LDEI+ MP++LQAKLL+VL++R 
Sbjct  71   PESLAESQLFGVSSGAFTGVCRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRG  130

Query  234  VERLGGQHAIPLDIRIIASTNRDLRQAVEFGHFREDLFYRLDVLPLKIAPLRERKADILP  293
            VERLG+ + IP+D+R+IAS++R L + VE G FR DL++RL+ L L++++LR R+ +ILP
Sbjct  131  VERLGSTEFIPVDLRVIASAQRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILP  190

Query  294  LAEHFLGLYGQSDNASRCYFSEHARQVLVTYDWPGNVRELENCIQRALVMRRGQAIQVAE  353
            L ++F    +     S   +     Q+L++ DW+GN+REL +  +R +            
Sbjct  191  LFDQFTQAIAAEFGRSAPVLDSGRVQLLLSHDWSGNIRELKSAAKRFV------------  238

Query  354  LGLNIQEETLELEPLGATEGLKASKQQAEFQYIIDVLKRFNGQRTLSAQALGMTTRALRY  413
            LG+ +    L LEP +   GL++  +  E + I D LKR   +     Q L +  R+L Y
Sbjct  239  LGFPLLGVEL-LEPEDCDTGLRTQLRVIEKRLIQDALKRHRHNVDAVLQELELPRRTL-Y  296

Query  414  RLVQMREAGIDIE  426
            +  +M+E G+  +
Sbjct  297  H--RMKELGVAAQ  307

37) AciX8_2166 in NC_016631


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  162 bits (598),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 118/292 (41%), Positives = 179/292 (62%), Gaps = 13/292 (4%)

Query  36   VVTVASTDSTVLIEGETGTGKELIARAIHNLSPRSDQNYVRFNCAAIPLGLLESELFGYE  95
            V+  A  D  +L+ GETGTGK+ +A +IHNLS+R++  +V  NCAAIP +L ES+LFG  
Sbjct  25   VMNGAIMDMDLLLCGETGTGKDTLANTIHNLSSRTGP-FVGMNCAAIPESLAESQLFGVS  83

Query  96   KGAFTGAVVRKLGRFELSNGGTLFLDEIGDIPLELQAKLLRVLQEQEFERLGSNLTQKVD  155
             GAFTG    + G +E SNGGTL+LDEI+ +P+ LQAKLL+VL+++  ERLGS     VD
Sbjct  84   SGAFTGVCRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRGVERLGSTEFIPVD  143

Query  156  VRIVAATHRNLKQMVKEKQFRSDLFFRLSVFPIFVPPLRDRREDIPMLVRAFVGNYVRRM  215
            +R++A+++R L ++V +  FR DL+FRL+ + + +P+LR RRE+I  L   F        
Sbjct  144  LRVIASAQRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILPLFDQFTQAIAAEF  203

Query  216  GRRVETIPEETMSALVEHDWPGNVRELQNFIERAVILSPGLVLRAPLEGLD--RPGECIS  273
            GR    +    +  L+ HDW+GN+REL++   R       +VL  PL G++   P +C +
Sbjct  204  GRSAPVLDSGRVQLLLSHDWSGNIRELKSAAKR-------FVLGFPLLGVELLEPEDCDT  256

Query  274  SAPKTLAQMEFDHILQAVKETDWVIGGPMGAATKLGLKRTTLIAKMRKLGVS  325
            +    L  +E   I +A+K     +++ +     L L R TL  +M+ LGV+
Sbjct  257  GLRTQLRVIEKRLIQDALKRHRHNVDAVL---QELELPRRTLYHRMKELGVA  305

38) swp_5090 in NC_011566


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  162 bits (597),  Expect = 4e-41, Method: Compositional matrix adjust.
 Identities = 129/311 (42%), Positives = 203/311 (66%), Gaps = 18/311 (5%)

Query  115  VSAARESRQLLMLAHRAAMTEATVLLTGESGTGKEPIARYIHRHSNRAKQPFVAINCAAI  174
            ++A  E++Q++M    +A+ +  +LL GE+GTGK+ +A  IH  S+R+  PFV++NCAAI
Sbjct  15   ITAQSEGHQVVM---NGAIMDMDLLLCGETGTGKDTLANTIHNLSSRT-GPFVGMNCAAI  70

Query  175  PESILESLLFGHVKGAFTGAMNEQPGKFEMANGGTLLLDEIGEMPlllqakllrvlQERE  234
            PES+ ES LFG   GAFTG    + G +E +NGGTL LDEI+ MP+ LQAKLL+VL++R 
Sbjct  71   PESLAESQLFGVSSGAFTGVCRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRG  130

Query  235  VERLGGHKSIPLNIRVIAATNKDLRSAVQNGQFREDLFYRLDVLPLKILPLRQRREDILP  294
            VERLG+   IP+++RVIA++++ L   V++G FR DL++RL+ L L++ +LR RRE+ILP
Sbjct  131  VERLGSTEFIPVDLRVIASAQRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILP  190

Query  295  LAEHFLQKYKMLAGEQSCYFSDQAKNLLLSHNWPGNVRELENTIQRALVMRRGQALQAAE  354
            L ++F Q      G  +  +     +LLLSH+W+GN+REL ++ +R ++   G +L + E
Sbjct  191  LFDQFTQAIAAEFGRSAPVLDSGRVQLLLSHDWSGNIRELKSAAKRFVL---GFPLLGVE  247

Query  355  LGLVDQDAQPYSEQSELGLKASKRRAEFQYIIDTLKQHNGHRNQTASALGMTTRALRYKL  414
            L       +P  E+ + GL++  R  E + I D+LK+H  + +     L +  R+L Y  
Sbjct  248  L------LEP--EDCDTGLRTQLRVIEKRLIQDALKRHRHNVDAVLQELELPRRTL-YH-  297

Query  415  VQMREEGIDID  425
             +M+E G+  +
Sbjct  298  -RMKELGVAAQ  307

39) SSON53_16880 in NC_016822


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  160 bits (590),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 117/286 (41%), Positives = 176/286 (62%), Gaps = 12/286 (4%)

Query  92   DSTVLILGETGTGKELIARAIHNLSGRNNRRMVKMNCAAMPAGLLESDLFGHERGAFTGA  151
            D  +L+ GETGTGK+ +A +IHNLS+R     V MNCAA+P +L ES+LFG   GAFTG 
Sbjct  32   DMDLLLCGETGTGKDTLANTIHNLSSRTGP-FVGMNCAAIPESLAESQLFGVSSGAFTGV  90

Query  152  SAQRIGRFELADKSSLFLDEVGDMPLELQPKLLRVLQEQEFERLGSNKIIQTDVRLIAAT  211
               R G +E ++ ++L+LDE++ MP+ LQ+KLL+VL+++  ERLGS  +I  D+R+IA++
Sbjct  91   CRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRGVERLGSTEFIPVDLRVIASA  150

Query  212  NRDLKKMVADREFHSDLYYRLNVFPIHLPPLRERPEDIPLLAKAFTFKIARRLGRNIDSI  271
            +R L  +V +  F+ DLY+RLN + ++LP+LR R E+I  L   FT  IA  +GR+   +
Sbjct  151  QRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILPLFDQFTQAIAAEFGRSAPVL  210

Query  272  PAETLRTLSNMEWPGNVRELENVIERAVLLTRGNVLQLSLPDIVLPEPETPPAATVVAQE  331
             +  ++ L + +W+GN+REL +   R        VL ++L ++ L EPE    + + +Q 
Sbjct  211  DSGRVQLLLSHDWSGNIRELKSAAKR-------FVLGFPLLGVELLEPED-CDTGLRTQL  262

Query  332  GEDEYQLIVRVLKETNGVVAGPKGAAQRLGLKRTTLLSRMKRLGID  377
               E +LI   LK     V    +  Q L L R TL  RMK LG+ 
Sbjct  263  RVIEKRLIQDALKRHRHNVD---AVLQELELPRRTLYHRMKELGVA  305

40) MEALZ_0567 in NC_016112


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  160 bits (591),  Expect = 8e-41, Method: Compositional matrix adjust.
 Identities = 102/245 (42%), Positives = 170/245 (70%), Gaps = 8/245 (3%)

Query  6    SIIGKSPALDSLLRSARMVACTDVTVFIKGETGTGKEVLASAIQKESARANKPFIKLNCA  65
            +I ++S + + ++ +A M    D+ +++ GETGTGK+ LA++I++ S+R+  PF+ +NCA
Sbjct  14   GITAQSEGHQVVMNGAIM----DMDLLLCGETGTGKDTLANTIHNLSSRTG-PFVGMNCA  68

Query  66   ALPESLVESELFGHKKGAFTGANVNKQGIFQAADGGTLFLDEINSLPLSIQAKLLRFLEL  125
            A+PESL ES+LFG   GAFTG   +++G ++A++GGTL+LDEI+S+P+S+QAKLL+ LE 
Sbjct  69   AIPESLAESQLFGVSSGAFTGVCRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLEN  128

Query  126  GECLAVGETKPYRVDVRIIAASNQDLVKQIDAGQFRQDLYFRLNVVPLELPPLSKRTEDI  185
                 +G T    VD+R+IA++++ L   ++ G FR+DLYFRLN + L+LP+L  R E+I
Sbjct  129  RGVERLGSTEFIPVDLRVIASAQRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQI  188

Query  186  EPLITHFVRHFAQAHSLEAPKFSKQSVRVLTRYRWPGNIRELRNLCERLSI---LLAGKV  242
             PL+ +F + +A   +  AP +    V++L    W+GNIREL++   R+ +   LL+  +
Sbjct  189  LPLFDQFTQAIAAEFGRSAPVLDSGRVQLLLSHDWSGNIRELKSAAKRFVLGFPLLGVEL  248

Query  243  IEPDN  247
            +EP++
Sbjct  249  LEPED  253

41) Nhal_2343 in NC_013960


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  158 bits (585),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 125/287 (44%), Positives = 183/287 (64%), Gaps = 18/287 (6%)

Query  48   VLISGESGTGKEVLAHYIHRHSRCCEGPFVAINCAAIPENMLEATLFGYEKGAFTGAHQT  107
            +L+ GE+GTGK+ LA+ IH  S    GPFV++NCAAIPE++ E+ LFG   GAFTG  ++
Sbjct  35   LLLCGETGTGKDTLANTIHNLS-SRTGPFVGMNCAAIPESLAESQLFGVSSGAFTGVCRS  93

Query  108  RPGKFEQAQGGTLLLDEISEMDLDLQAKLLRVLQEREVERLGGCKVIPLDVRILATTNQD  167
            R G +E ++GGTL LDEI  M + LQAKLL+VL++R VERLG+   IP+D+R++A++++ 
Sbjct  94   REGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRGVERLGSTEFIPVDLRVIASAQRP  153

Query  168  LREQIGNGQFREDLYYRLNVFPLQLPPLRERTQDIlplarrltasraaaVGRLPPRLTLA  227
            L E + +G FR DLY+RLN + LQLP+LR R ++ILPL  ++T + AA  GR +P L  +
Sbjct  154  LDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILPLFDQFTQAIAAEFGRSAPVLDSG  213

Query  228  AETKLLAHPWPGNIRELDNVIQRALILEEGEAITAQALAFE-AGMEAPLPRG-VGELSKD  285
                LL+H W+GNIREL +  +R +            L+F   G+E   P +    L  +
Sbjct  214  RVQLLLSHDWSGNIRELKSAAKRFV------------LGFPLLGVELLEPEDCDTGLRTQ  261

Query  286  LKSHEKQLILDTLARCGGRRKQAAAQLGISERTLRYKLARLRKAGVT  332
            L+  EK+LI D+L R          +L ++ RTL Y   R++  GV+
Sbjct  262  LRVIEKRLIQDALKRHRHNVDAVLQELELPRRTL-YH--RMKELGVA  305

42) Spea_0085 in NC_009901


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  152 bits (561),  Expect = 3e-38, Method: Compositional matrix adjust.
 Identities = 127/311 (41%), Positives = 202/311 (65%), Gaps = 18/311 (5%)

Query  115  ICAAPVSRQLLMLAHRAASTEATVLLTGESGTGKEPLARYIHRHSNRADKAFIAINCAAI  174
            I A + ++Q++M    +A  +  +LL GE+GTGK+ LA  IH  S+R++ +F+++NCAAI
Sbjct  15   ITAQSEGHQVVM---NGAIMDMDLLLCGETGTGKDTLANTIHNLSSRTG-PFVGMNCAAI  70

Query  175  PESILESILFGHIKGAFTGATTDQPGKFELANGGTLLLDEIGEMPlllqakllrvlQERE  234
            PES+ ES LFG   GAFTG    + G +E +NGGTL LDEI+ MP+ LQAKLL+VL++R 
Sbjct  71   PESLAESQLFGVSSGAFTGVCRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRG  130

Query  235  VERLGSHRSIALDIRVIAATNKDLRQAVQDGKFREDLFYRLDVLPIKILPLRQRREDILP  294
            VERLGS   I++D+RVIA++++ L + V++G FR DL++RL+ L +++ +LR RRE+ILP
Sbjct  131  VERLGSTEFIPVDLRVIASAQRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILP  190

Query  295  IAEHFLQRYKILAANQQCYFSEQARNLLLSHNWPGNVRELENTIQRALVMRRGQALQAED  354
            + ++F Q      +     +     +LLLSH+W+GN+REL ++ +R ++   G +L + +
Sbjct  191  LFDQFTQAIAAEFGRSAPVLDSGRVQLLLSHDWSGNIRELKSAAKRFVL---GFPLLGVE  247

Query  355  LGLENQDGSILVEQNELGLKASKRQAEFQYIIDTLKRHNGHRIQTAEALGMTTRALRYKL  414
            L LE +D        + GL++  R  E + I D+LKRH  +     + L +  R+L Y  
Sbjct  248  L-LEPED-------CDTGLRTQLRVIEKRLIQDALKRHRHNVDAVLQELELPRRTL-YH-  297

Query  415  AQMREEGIDIE  425
             +M+E G+  +
Sbjct  298  -RMKELGVAAQ  307

43) SCE1572_16595 in NC_021658


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  149 bits (548),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 121/280 (44%), Positives = 192/280 (69%), Gaps = 7/280 (2%)

Query  31   LPVLILGETGTGKEVVAEWIAGMSRHPRERFVKVNCAslseslveselFGHERGAFTGAV  90
            + +L+ GETGTGK+ +A+ I  +S +    FV +NCA+++ESL ES+LFG   GAFTG  
Sbjct  33   MDLLLCGETGTGKDTLANTIHNLSSRT-GPFVGMNCAAIPESLAESQLFGVSSGAFTGVC  91

Query  91   APREGLFEAAHEGTLFLDEVGELSPRTQAKLLRTLEYGEIVRVGSTRPRRVDVRVIAATH  150
             +REG +EA++ GTL+LDE++ ++   QAKLL+ LE   + R+GST    VD+RVIA+++
Sbjct  92   RSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRGVERLGSTEFIPVDLRVIASAQ  151

Query  151  RDLEQMVRDGDFRQDLYFRLNAVTLRIPPLRARTTEVlplaelfaarlarrlgrpaprla  210
            R L+++V +G FR+DLYFRLNA+TL++P+LR+R  ++LPL + F+  +A  +GR+AP L 
Sbjct  152  RPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILPLFDQFTQAIAAEFGRSAPVLD  211

Query  211  peaTAALLAHTWPGNIRELRHVIDRAVVMSKGGPIVADHLMLEAPREKADAGIKGDLRTF  270
            +     LL+H W+GNIREL+    R V+   G P+++ +L+     E  D+G++ +LR +
Sbjct  212  SGRVQLLLSHDWSGNIRELKSAAKRFVL---GFPLLGVELL---EPEDCDTGLRTQLRVI  265

Query  271  ERDRIVAALDRTRQNQTRAAELLGVSRRTLTNKLNAYGIA  310
            E+  I  AL R R+N     + L ++RRTL ++++  G+A
Sbjct  266  EKRLIQDALKRHRHNVDAVLQELELPRRTLYHRMKELGVA  305

44) PputW619_0299 in NC_010501


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  148 bits (545),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 96/223 (44%), Positives = 147/223 (66%), Gaps = 7/223 (3%)

Query  51   LPVLIRGETGTGKELLARQIHRASDRGGLFVSVNCAAISPTYADAELFGYSAGSHGGTAS  110
            + +L+ GETGTGK+ LA  IH  S R G FV++NCAAI+ + A+++LFG S+G+  G   
Sbjct  33   MDLLLCGETGTGKDTLANTIHNLSSRTGPFVGMNCAAIPESLAESQLFGVSSGAFTGVCR  92

Query  111  SRAGWFGSANGGTLYLDEIADLPLAIQGKLLAALENREVTRVGAQQPQPVDVRLVAATSI  170
            SR G + ++NGGTLYLDEI  +P+++Q+KLL  LENR V R+G+ +  PVD+R++A++  
Sbjct  93   SREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRGVERLGSTEFIPVDLRVIASAQR  152

Query  171  DLARVVKAGRFNERLYQYLHEGALELPPLRERCGDILPLAEYFVGIYCARLQRPVPLISE  230
             L  +V  G F   LY  L+  +L+LP+LR R  +ILPL + F     A + R+ P++  
Sbjct  153  PLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILPLFDQFTQAIAAEFGRSAPVLDS  212

Query  231  AAQQVLEAHTWPGNTRELEN-----IIHFALLVNDSEEIQPED  268
            +  Q+L +H W+GN REL +     ++ F+LL  + E ++PED
Sbjct  213  GRVQLLLSHDWSGNIRELKSAAKRFVLGFPLL--GVELLEPED  253

45) PP4_52350 in NC_021505


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  147 bits (542),  Expect = 5e-37, Method: Compositional matrix adjust.
 Identities = 96/223 (44%), Positives = 146/223 (66%), Gaps = 7/223 (3%)

Query  51   LPVLIRGETGTGKELLARQIHRASDRGGLFVSVNCAAISPTYADAELFGYSAGSHGGTAS  110
            + +L+ GETGTGK+ LA  IH  S R G FV++NCAAI+ + A+++LFG S+G+  G   
Sbjct  33   MDLLLCGETGTGKDTLANTIHNLSSRTGPFVGMNCAAIPESLAESQLFGVSSGAFTGVCR  92

Query  111  SRAGWFGSANGGTLYLDEIADLPLAIQGKLLAALENREVTRVGAQQPQPVDVRLVAATSI  170
            SR G + ++NGGTLYLDEI  +P+++Q+KLL  LENR V R+G+ +  PVD+R++A++  
Sbjct  93   SREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRGVERLGSTEFIPVDLRVIASAQR  152

Query  171  DLARVVRAGRFNERLYQYLREGALELPPLRERPGDILPLAEYFVGIYSVRLQRPVPLVSE  230
             L  +V  G F   LY  L   +L+LP+LR R  +ILPL + F    +  + R+ P++  
Sbjct  153  PLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILPLFDQFTQAIAAEFGRSAPVLDS  212

Query  231  AAQQVLEAHFWPGNTRELEN-----VIHFALLVNDSEEIQPED  268
            +  Q+L +H W+GN REL +     V+ F+LL  + E ++PED
Sbjct  213  GRVQLLLSHDWSGNIRELKSAAKRFVLGFPLL--GVELLEPED  253

46) PputGB1_5223 in NC_010322


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  146 bits (539),  Expect = 8e-37, Method: Compositional matrix adjust.
 Identities = 98/224 (44%), Positives = 146/224 (66%), Gaps = 9/224 (4%)

Query  51   VPVLIRGETGTGKELLARQIHRASDRGGLFVSVNCAAISPTYADAELFGYSAGSHGGTAS  110
            + +L+ GETGTGK+ LA  IH  S R G FV++NCAAI+ + A+++LFG S+G+  G   
Sbjct  33   MDLLLCGETGTGKDTLANTIHNLSSRTGPFVGMNCAAIPESLAESQLFGVSSGAFTGVCR  92

Query  111  SRAGWFGSANGGTLYLDEIADLPLAIQGKLLAALENREVTRVGAQQPQPVDVRLVAATSI  170
            SR G + ++NGGTLYLDEI  +P+++Q+KLL  LENR V R+G+ +  PVD+R++A++  
Sbjct  93   SREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRGVERLGSTEFIPVDLRVIASAQR  152

Query  171  DLARVVRAGRFNERLYQYLREGALELPPLRERPGDILPLAEYFVGIYSVRLQRPVPLVSE  230
             L  +V  G F   LY  L   +L+LP+LR R  +ILPL + F    +  + R+ P++  
Sbjct  153  PLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILPLFDQFTQAIAAEFGRSAPVLDS  212

Query  231  AAQQVLEAHFWPGNTRELEN-----VIHFALLVNDGAEIL-PED  268
            +  Q+L +H W+GN REL +     V+ F+LL   G E+L PED
Sbjct  213  GRVQLLLSHDWSGNIRELKSAAKRFVLGFPLL---GVELLEPED  253

47) LFML04_2112 in NC_018649


> AY597277|44|G44|51103015|AAT96162.1|Pseudomonas_viridiflava_LP23.1a|-|37321..38256|hrpR|-|HrpR
Length=311

 Score =  132 bits (486),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 97/232 (42%), Positives = 156/232 (68%), Gaps = 11/232 (4%)

Query  23   ELTVVLEGETGTGKELFAQALHEKSGRSRGPLIPVNMAGIPSTLFESLFFGHRKGSFTGA  82
            ++ ++L GETGTGK+ +A+++H+ S+R+ GP++ +N A+IP +L ES +FG   G+FTG 
Sbjct  32   DMDLLLCGETGTGKDTLANTIHNLSSRT-GPFVGMNCAAIPESLAESQLFGVSSGAFTGV  90

Query  83   QETRDGFFGSADGGTLFLDEFNSMDPDLQPKLLRVLETR--HYLSVGEFRPRKTDARVVL  140
              +R+G++ +++GGTL+LDE++SM   LQ+KLL+VLE R  + L+  EF P   D RV+ 
Sbjct  91   CRSREGYIEASNGGTLYLDEIDSMPMSLQAKLLHVLENRGVERLGSTEFIP--VDLRVIA  148

Query  141  ATNVSLDRLRETGRLREDLYFRLVAHRIRIPPLRERLMDLPDLVSAQVRRIAAELGREGV  200
            +++ +LD L E G +R DLYFRL A  +++P+LR R  ++  L     + IAAE+GR + 
Sbjct  149  SAQRPLDELVEQGLFRRDLYFRLNALTLQLPALRTRREQILPLFDQFTQAIAAEFGRSAP  208

Query  201  SVPDSSMRALLSYGWPGNVRELSEKLRSAVLHSPDGLLSIPLLFPDAMKEEC  252
             +  + ++ LLS +W+GN+REL    +  VL  P  LL++ LL P    E+C
Sbjct  209  VLDSGRVQLLLSHDWSGNIRELKSAAKRFVLGFP--LLGVELLEP----EDC  254