Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of unnamed gene of AF447814

DNA-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) ECSP_1481
( - )

NC_013008
(Escherichia coli TW14359)

e-166

94.5

2) SFxv_0259
( - )

NC_017328
(Shigella flexneri 2002017)

e-166

95.2

3) SFxv_3828
( - )

NC_017328
(Shigella flexneri 2002017)

e-166

95.2

4) SFxv_1869
( - )

NC_017328
(Shigella flexneri 2002017)

e-165

94.8

5) SFxv_1976
( - )

NC_017328
(Shigella flexneri 2002017)

e-165

94.8

6) unnamed
( - )

NC_004431
(Escherichia coli CFT073)

e-150

100

7) unnamed
( - )

NC_004431
(Escherichia coli CFT073)

e-143

99.2

8) insC
( - )

NC_011745
(Escherichia coli ED1a)

e-143

99.2

9) insC
( - )

NC_011742
(Escherichia coli S88)

e-143

99.2

10) EcSMS35_3227
( - )

NC_010498
(Escherichia coli SMS-3-5)

e-141

98.2

11) unnamed
( - )

NC_007613
(Shigella boydii Sb227)

e-128

95.2

• Sequence Alignments

1) ECSP_1481 in NC_013008


>AF447814|44|G44|18265903|AAL67376.1|Escherichia_coli_CFT073|+|32306..32635|-|-|insertion 
          Length = 330

 Score = 582 bits (1501), Expect = e-166
 Identities = 312/331 (94%)
 Strand = Plus / Plus

Query: 1   atgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgca 60
           ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| 
Sbjct: 1   atgattgatgtcttaggaccggagaaacgcagacggcgtactacacaggaaaagatcgct 60

Query: 61  attgttcagcagagctttgaaccggggatgacggtctccctcgttgcccggcaacatggt 120
           |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 61  attgttcagcagagctttgaaccgggaatgacggtctcccttgttgcccggcaacatggt 120

Query: 121 gtagcagccagccagttatttctctggcgtaagcaatactaggaaggaagtcttactgct 180
           || |||||||||||||||||||||||||| ||||||||| |||| |||||||||| ||||
Sbjct: 121 gtggcagccagccagttatttctctggcgcaagcaataccaggagggaagtcttagtgct 180

Query: 181 gtcgccgccggagaacaggttgttcctgcctctgaacttgctgccgccatgaagcagatt 240
           || ||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 181 gtggccgcaggagaacaggtcgttcctgcctctgaacttgctgctgccatgaagcagatt 240

Query: 241 aaagaactccagcgcctgctcggcaagaaaacgatggaaaatgaactcctcaaagaagcc 300
           ||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||
Sbjct: 241 aaagaactccagcgcctgctcggtaa-aaaacgatggaaaatgaactccttaaagaagcc 299

Query: 301 gttgaatatggacgggcaaaaaagtggatag 331
           ||||||||||| || ||||||||||||||||
Sbjct: 300 gttgaatatgggcgtgcaaaaaagtggatag 330

2) SFxv_0259 in NC_017328


>AF447814|44|G44|18265903|AAL67376.1|Escherichia_coli_CFT073|+|32306..32635|-|-|insertion 
          Length = 330

 Score = 580 bits (1497), Expect = e-166
 Identities = 314/332 (95%)
 Strand = Plus / Plus

Query: 46  atgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgca 105
           ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| 
Sbjct: 1   atgattgatgtcttaggaccggagaaacgcagacggcgtactacacaggaaaagatcgct 60

Query: 106 attgttcagcagagctttgaaccggggatgacggtctccctcgttgcccggcaacatggt 165
           |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 61  attgttcagcagagctttgaaccgggaatgacggtctcccttgttgcccggcaacatggt 120

Query: 166 gtagcagccagccagttatttctctggcgtaagcaataccaggaaggaagtcttactgct 225
           || |||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||
Sbjct: 121 gtggcagccagccagttatttctctggcgcaagcaataccaggagggaagtcttagtgct 180

Query: 226 gtggccgccggagaacaggttgttcctgcctctgaacttgctgccgccatgaagcagatt 285
           |||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 181 gtggccgcaggagaacaggtcgttcctgcctctgaacttgctgctgccatgaagcagatt 240

Query: 286 aaagaactccagcgcctggctcggcaagaaaacgatggaaaatgaactcctcaaagaagc 345
           |||||||||||||||||| ||||| || ||||||||||||||||||||||| ||||||||
Sbjct: 241 aaagaactccagcgcctg-ctcggtaa-aaaacgatggaaaatgaactccttaaagaagc 298

Query: 346 cgttgaatatggacgggcaaaaaagtggatag 377
           |||||||||||| || ||||||||||||||||
Sbjct: 299 cgttgaatatgggcgtgcaaaaaagtggatag 330

3) SFxv_3828 in NC_017328


>AF447814|44|G44|18265903|AAL67376.1|Escherichia_coli_CFT073|+|32306..32635|-|-|insertion 
          Length = 330

 Score = 580 bits (1497), Expect = e-166
 Identities = 314/332 (95%)
 Strand = Plus / Plus

Query: 46  atgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgca 105
           ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| 
Sbjct: 1   atgattgatgtcttaggaccggagaaacgcagacggcgtactacacaggaaaagatcgct 60

Query: 106 attgttcagcagagctttgaaccggggatgacggtctccctcgttgcccggcaacatggt 165
           |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 61  attgttcagcagagctttgaaccgggaatgacggtctcccttgttgcccggcaacatggt 120

Query: 166 gtagcagccagccagttatttctctggcgtaagcaataccaggaaggaagtcttactgct 225
           || |||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||
Sbjct: 121 gtggcagccagccagttatttctctggcgcaagcaataccaggagggaagtcttagtgct 180

Query: 226 gtggccgccggagaacaggttgttcctgcctctgaacttgctgccgccatgaagcagatt 285
           |||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 181 gtggccgcaggagaacaggtcgttcctgcctctgaacttgctgctgccatgaagcagatt 240

Query: 286 aaagaactccagcgcctggctcggcaagaaaacgatggaaaatgaactcctcaaagaagc 345
           |||||||||||||||||| ||||| || ||||||||||||||||||||||| ||||||||
Sbjct: 241 aaagaactccagcgcctg-ctcggtaa-aaaacgatggaaaatgaactccttaaagaagc 298

Query: 346 cgttgaatatggacgggcaaaaaagtggatag 377
           |||||||||||| || ||||||||||||||||
Sbjct: 299 cgttgaatatgggcgtgcaaaaaagtggatag 330

4) SFxv_1869 in NC_017328


>AF447814|44|G44|18265903|AAL67376.1|Escherichia_coli_CFT073|+|32306..32635|-|-|insertion 
          Length = 330

 Score = 578 bits (1491), Expect = e-165
 Identities = 313/332 (94%)
 Strand = Plus / Plus

Query: 46  atgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgca 105
           ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| 
Sbjct: 1   atgattgatgtcttaggaccggagaaacgcagacggcgtactacacaggaaaagatcgct 60

Query: 106 attgttcagcagagctttgaaccggggatgacggtctccctcgttgcccggcaacatggt 165
           |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 61  attgttcagcagagctttgaaccgggaatgacggtctcccttgttgcccggcaacatggt 120

Query: 166 gtagcagccagccagctatttctctggcgtaagcaataccaggaaggaagtcttactgct 225
           || |||||||||||| ||||||||||||| |||||||||||||| |||||||||| ||||
Sbjct: 121 gtggcagccagccagttatttctctggcgcaagcaataccaggagggaagtcttagtgct 180

Query: 226 gtggccgccggagaacaggttgttcctgcctctgaacttgctgccgccatgaagcagatt 285
           |||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 181 gtggccgcaggagaacaggtcgttcctgcctctgaacttgctgctgccatgaagcagatt 240

Query: 286 aaagaactccagcgcctggctcggcaagaaaacgatggaaaatgaactcctcaaagaagc 345
           |||||||||||||||||| ||||| || ||||||||||||||||||||||| ||||||||
Sbjct: 241 aaagaactccagcgcctg-ctcggtaa-aaaacgatggaaaatgaactccttaaagaagc 298

Query: 346 cgttgaatatggacgggcaaaaaagtggatag 377
           |||||||||||| || ||||||||||||||||
Sbjct: 299 cgttgaatatgggcgtgcaaaaaagtggatag 330

5) SFxv_1976 in NC_017328


>AF447814|44|G44|18265903|AAL67376.1|Escherichia_coli_CFT073|+|32306..32635|-|-|insertion 
          Length = 330

 Score = 578 bits (1490), Expect = e-165
 Identities = 313/332 (94%)
 Strand = Plus / Plus

Query: 46  atgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgca 105
           ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| 
Sbjct: 1   atgattgatgtcttaggaccggagaaacgcagacggcgtactacacaggaaaagatcgct 60

Query: 106 attgttcagcagagctttgaaccggggatgacggtctccctcgttgcccggcaacatggt 165
           |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 61  attgttcagcagagctttgaaccgggaatgacggtctcccttgttgcccggcaacatggt 120

Query: 166 gtagcagccagccagttatttctctggcgtaagcaataccaggaaggaagtcttactgct 225
           || |||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||
Sbjct: 121 gtggcagccagccagttatttctctggcgcaagcaataccaggagggaagtcttagtgct 180

Query: 226 gtggccgccggagaacaggttgttcctgcctctgaacttgctgccgccatgaagcagatt 285
           |||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 181 gtggccgcaggagaacaggtcgttcctgcctctgaacttgctgctgccatgaagcagatt 240

Query: 286 aaagaactccagcgcctggctcggcaagaaaacgatgaaaaatgaactcctcaaagaagc 345
           |||||||||||||||||| ||||| || ||||||||| ||||||||||||| ||||||||
Sbjct: 241 aaagaactccagcgcctg-ctcggtaa-aaaacgatggaaaatgaactccttaaagaagc 298

Query: 346 cgttgaatatggacgggcaaaaaagtggatag 377
           |||||||||||| || ||||||||||||||||
Sbjct: 299 cgttgaatatgggcgtgcaaaaaagtggatag 330

6) unnamed in NC_004431


>AF447814|44|G44|18265903|AAL67376.1|Escherichia_coli_CFT073|+|32306..32635|-|-|insertion 
          Length = 330

 Score = 530 bits (1367), Expect = e-150
 Identities = 270/270 (100%)
 Strand = Plus / Minus

Query: 1   ttttttaccgagcaggcgctggagttctttaatctgcttcatggcagcagcaagttcaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ttttttaccgagcaggcgctggagttctttaatctgcttcatggcagcagcaagttcaga 211

Query: 61  ggcaggaacgacctgttctcctgcggccacagcactaagacttccctcctggtattgctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 ggcaggaacgacctgttctcctgcggccacagcactaagacttccctcctggtattgctt 151

Query: 121 gcgccagagaaataactggctggctgccacaccatgttgccgggcaacaagggagaccgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 gcgccagagaaataactggctggctgccacaccatgttgccgggcaacaagggagaccgt 91

Query: 181 cattcccggttcaaagctctgctgaacaatagcgatcttttcctgtgtagtacgccgtct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90  cattcccggttcaaagctctgctgaacaatagcgatcttttcctgtgtagtacgccgtct 31

Query: 241 gcgtttctccggtcctaagacatcaatcat 270
           ||||||||||||||||||||||||||||||
Sbjct: 30  gcgtttctccggtcctaagacatcaatcat 1

7) unnamed in NC_004431


>AF447814|44|G44|18265903|AAL67376.1|Escherichia_coli_CFT073|+|32306..32635|-|-|insertion 
          Length = 330

 Score = 503 bits (1299), Expect = e-143
 Identities = 258/260 (99%)
 Strand = Plus / Plus

Query: 92  atgattgatgtcttaggaccggagaaacgcagacggcgtactacacaggaaaagatcgct 151
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgattgatgtcttaggaccggagaaacgcagacggcgtactacacaggaaaagatcgct 60

Query: 152 attgttcagcagagctttgaaccgggaatgacggtctcccttgttgcccggcaacacggt 211
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 61  attgttcagcagagctttgaaccgggaatgacggtctcccttgttgcccggcaacatggt 120

Query: 212 gtggcagccagccagttatttctctggcgcaagcaataccaggagggaagtcttactgct 271
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 121 gtggcagccagccagttatttctctggcgcaagcaataccaggagggaagtcttagtgct 180

Query: 272 gtggccgcaggagaacaggtcgttcctgcctctgaacttgctgctgccatgaagcagatt 331
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtggccgcaggagaacaggtcgttcctgcctctgaacttgctgctgccatgaagcagatt 240

Query: 332 aaagaactccagcgcctgct 351
           ||||||||||||||||||||
Sbjct: 241 aaagaactccagcgcctgct 260

8) insC in NC_011745


>AF447814|44|G44|18265903|AAL67376.1|Escherichia_coli_CFT073|+|32306..32635|-|-|insertion 
          Length = 330

 Score = 503 bits (1299), Expect = e-143
 Identities = 258/260 (99%)
 Strand = Plus / Plus

Query: 46  atgattgatgtcttaggaccggagaaacgcagacggcgtactacacaggaaaagatcgct 105
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgattgatgtcttaggaccggagaaacgcagacggcgtactacacaggaaaagatcgct 60

Query: 106 attgttcagcagagctttgaaccgggaatgacggtctcccttgttgcccggcaacacggt 165
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 61  attgttcagcagagctttgaaccgggaatgacggtctcccttgttgcccggcaacatggt 120

Query: 166 gtggcagccagccagttatttctctggcgcaagcaataccaggagggaagtcttactgct 225
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 121 gtggcagccagccagttatttctctggcgcaagcaataccaggagggaagtcttagtgct 180

Query: 226 gtggccgcaggagaacaggtcgttcctgcctctgaacttgctgctgccatgaagcagatt 285
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtggccgcaggagaacaggtcgttcctgcctctgaacttgctgctgccatgaagcagatt 240

Query: 286 aaagaactccagcgcctgct 305
           ||||||||||||||||||||
Sbjct: 241 aaagaactccagcgcctgct 260

9) insC in NC_011742


>AF447814|44|G44|18265903|AAL67376.1|Escherichia_coli_CFT073|+|32306..32635|-|-|insertion 
          Length = 330

 Score = 503 bits (1299), Expect = e-143
 Identities = 258/260 (99%)
 Strand = Plus / Plus

Query: 46  atgattgatgtcttaggaccggagaaacgcagacggcgtactacacaggaaaagatcgct 105
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgattgatgtcttaggaccggagaaacgcagacggcgtactacacaggaaaagatcgct 60

Query: 106 attgttcagcagagctttgaaccgggaatgacggtctcccttgttgcccggcaacacggt 165
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 61  attgttcagcagagctttgaaccgggaatgacggtctcccttgttgcccggcaacatggt 120

Query: 166 gtggcagccagccagttatttctctggcgcaagcaataccaggagggaagtcttactgct 225
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 121 gtggcagccagccagttatttctctggcgcaagcaataccaggagggaagtcttagtgct 180

Query: 226 gtggccgcaggagaacaggtcgttcctgcctctgaacttgctgctgccatgaagcagatt 285
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtggccgcaggagaacaggtcgttcctgcctctgaacttgctgctgccatgaagcagatt 240

Query: 286 aaagaactccagcgcctgct 305
           ||||||||||||||||||||
Sbjct: 241 aaagaactccagcgcctgct 260

10) EcSMS35_3227 in NC_010498


>AF447814|44|G44|18265903|AAL67376.1|Escherichia_coli_CFT073|+|32306..32635|-|-|insertion 
          Length = 330

 Score = 498 bits (1286), Expect = e-141
 Identities = 258/263 (98%)
 Strand = Plus / Plus

Query: 1   atgattgatgtcttaggaccggagaaacgcagacggcgtactacacaggaaaagatcgct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgattgatgtcttaggaccggagaaacgcagacggcgtactacacaggaaaagatcgct 60

Query: 61  attgttcagcagagctttgaacagggaatgacggtctcccttgttgcccggcaacacggt 120
           |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 61  attgttcagcagagctttgaaccgggaatgacggtctcccttgttgcccggcaacatggt 120

Query: 121 gtggcagccagccagttatttctctggcgcaagcaataccaggagggaagtcttactgct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 121 gtggcagccagccagttatttctctggcgcaagcaataccaggagggaagtcttagtgct 180

Query: 181 gtggctgccggagaacaggtcgttcctgcctctgaacttgctgctgccatgaagcagatt 240
           ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtggccgcaggagaacaggtcgttcctgcctctgaacttgctgctgccatgaagcagatt 240

Query: 241 aaagaactccagcgcctgctcgg 263
           |||||||||||||||||||||||
Sbjct: 241 aaagaactccagcgcctgctcgg 263


 Score = 38 bits (99), Expect = 9e-03
 Identities = 20/20 (100%)
 Strand = Plus / Plus

Query: 266 aaaaaacgatggaaaatgaa 285
           ||||||||||||||||||||
Sbjct: 265 aaaaaacgatggaaaatgaa 284

11) unnamed in NC_007613


>AF447814|44|G44|18265903|AAL67376.1|Escherichia_coli_CFT073|+|32306..32635|-|-|insertion 
          Length = 330

 Score = 454 bits (1172), Expect = e-128
 Identities = 238/250 (95%)
 Strand = Plus / Plus

Query: 92  atgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgca 151
           ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| 
Sbjct: 1   atgattgatgtcttaggaccggagaaacgcagacggcgtactacacaggaaaagatcgct 60

Query: 152 attgttcagcagagctttgaaccggggatgacggtctccctcgttgcccggcaacatggt 211
           |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 61  attgttcagcagagctttgaaccgggaatgacggtctcccttgttgcccggcaacatggt 120

Query: 212 gtagcagccagccagttatttctctggcgtaagcaataccaggaaggaagtcttactgct 271
           || |||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||
Sbjct: 121 gtggcagccagccagttatttctctggcgcaagcaataccaggagggaagtcttagtgct 180

Query: 272 gtggccgccggagaacaggttgttcctgcctctgaacttgctgccgccatgaagcagatt 331
           |||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 181 gtggccgcaggagaacaggtcgttcctgcctctgaacttgctgctgccatgaagcagatt 240

Query: 332 aaagaactcc 341
           ||||||||||
Sbjct: 241 aaagaactcc 250