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Homologs of escC gene of GQ338312

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) escC
( YP_003232146.1 )

T3SS structure protein EscC

NC_013361
(Escherichia coli 11368)

0.0

2) escC
( YP_003223482.1 )

T3SS structure protein EscC

NC_013353
(Escherichia coli 12009)

0.0

3) escC
( YP_003501881.1 )

escC

NC_013941
(Escherichia coli CB9615)

0.0

100

4) ECH74115_5069
( YP_002273173.1 )

type III secretion outer membrane pore, YscC/HrcC family

NC_011353
(Escherichia coli EC4115)

0.0

100

5) escC
( NP_290275.1 )

hypothetical protein

NC_002655
(Escherichia coli EDL933)

0.0

100

6) ECO55CA74_21250
( YP_006161355.1 )

outer membrane secretin SsaC

NC_017656
(Escherichia coli RM12579)

0.0

100

7) ECs4575
( NP_312602.1 )

EscC

NC_002695
(Escherichia coli Sakai)

0.0

100

8) escC
( YP_003080487.1 )

type III needle complex subunit

NC_013008
(Escherichia coli TW14359)

0.0

100

9) CDCO157_4310
( YP_006315175.1 )

protein EscC

NC_017906
(Escherichia coli Xuzhou21)

0.0

100

10) escC
( YP_002331417.1 )

T3SS structure protein EscC

NC_011601
(Escherichia coli E2348/69)

0.0

11) escC
( YP_003236095.1 )

T3SS structure protein EscC

NC_013364
(Escherichia coli 11128)

0.0

12) escC
( YP_003366509.1 )

T3SS structural protein EscC

NC_013716
(Citrobacter rodentium ICC168)

0.0

13) YE105_C0312
( YP_004296513.1 )

type III secretion outer membrane pore, YscC/HrcC family

NC_015224
(Yersinia enterocolitica 105.5R(r))

2e-111

14) Y11_35201
( YP_006007019.1 )

secretion system apparatus protein SsaC

NC_017564
(Yersinia enterocolitica Y11)

2e-111

15) YpsIP31758_3830
( YP_001402784.1 )

YscC/HrcC family type III secretion outer membrane protein

NC_009708
(Yersinia pseudotuberculosis IP 31758)

7e-108

16) YPTS_0336
( YP_001870782.1 )

YscC/HrcC family type III secretion outer membrane protein

NC_010634
(Yersinia pseudotuberculosis PB1/+)

7e-108

17) YPK_3917
( YP_001722635.1 )

YscC/HrcC family type III secretion outer membrane protein

NC_010465
(Yersinia pseudotuberculosis YPIII)

7e-108

18) A1122_03860
( YP_005520467.1 )

outer membrane secretin SsaC

NC_017168
(Yersinia pestis A1122)

9e-108

19) YPA_4027
( YP_653933.1 )

type III secretion protein

NC_008150
(Yersinia pestis Antiqua)

9e-108

20) YPN_3412
( YP_649339.1 )

type III secretion protein

NC_008149
(Yersinia pestis Nepal516)

9e-108

21) YPDSF_3714
( YP_001165037.1 )

type III secretion protein

NC_009381
(Yersinia pestis Pestoides F)

9e-108

22) gspD2
( NP_991804.1 )

type III secretion protein

NC_005810
(Yersinia pestis 91001)

2e-107

23) YPO0257
( YP_002345337.1 )

type III secretion protein

NC_003143
(Yersinia pestis CO92)

2e-107

24) YPD4_0224
( YP_005503436.1 )

type III secretion protein

NC_017154
(Yersinia pestis D106004)

2e-107

25) YPD8_0229
( YP_005507312.1 )

type III secretion protein

NC_017160
(Yersinia pestis D182038)

2e-107

26) YPC_0752
( YP_005622736.1 )

putative type III secretion protein

NC_017265
(Yersinia pestis Harbin 35)

2e-107

27) y0514
( NP_667852.1 )

secretin

NC_004088
(Yersinia pestis KIM)

2e-107

28) YPZ3_0222
( YP_003566394.1 )

type III secretion protein

NC_014029
(Yersinia pestis Z176003)

2e-107

29) YPTB0312
( YP_068858.1 )

type III secretion protein EscC/SpiA, outer membrane pore

NC_006155
(Yersinia pseudotuberculosis IP 32953)

2e-107

30) escC
( NP_902267.1 )

type III secretion system EscC protein

NC_005085
(Chromobacterium violaceum ATCC 12472)

6e-104

31) Sbal195_2249
( YP_001554677.1 )

YscC/HrcC family type III secretion outer membrane protein

NC_009997
(Shewanella baltica OS195)

9e-104

32) Sbal678_2258
( YP_005273465.1 )

type III secretion outer membrane pore, YscC/HrcC family

NC_016901
(Shewanella baltica OS678)

9e-104

33) SVI_2260
( YP_003557009.1 )

type III secretion system EscC protein

NC_014012
(Shewanella violacea DSS12)

3e-103

34) ssaC
( YP_002923068.1 )

type III outer membrane secretin precursor

NC_012751
(Candidatus Hamiltonella defensa T5A)

7e-103

35) SARI_01587
( YP_001570623.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

8e-100

36) Sbal117_2061
( YP_006037292.1 )

type III secretion outer membrane pore, YscC/HrcC family

NC_017579
(Shewanella baltica OS117)

9e-99

37) Sbal_1946
( YP_001050319.1 )

YscC/HrcC family type III secretion outer membrane protein

NC_009052
(Shewanella baltica OS155)

9e-99

38) ETAC_04145
( YP_007628320.1 )

outer membrane secretin SsaC

NC_020796
(Edwardsiella tarda C07-087)

4e-98

39) esaC
( YP_003294920.1 )

Type II secretory pathway, component PulD like protein

NC_013508
(Edwardsiella tarda EIB202)

4e-98

40) esaC
( YP_005698419.1 )

protein EsaC

NC_017309
(Edwardsiella tarda FL6-60)

4e-98

41) Sbal175_2420
( YP_006020977.1 )

type III secretion outer membrane pore, YscC/HrcC family

NC_017571
(Shewanella baltica BA175)

1e-95

42) NT01EI_0943
( YP_002932391.1 )

type III secretion outer membrane pore, YscC/HrcC family, putative

NC_012779
(Edwardsiella ictaluri 93-146)

2e-95

43) SBOV13921
( YP_008505261.1 )

type III secretion outer membrane pore, YscC/HrcC family

NC_022241
(Salmonella enterica 3114)

3e-95

44) SSPA1357
( YP_002142196.1 )

outer membrane secretory protein

NC_011147
(Salmonella enterica AKU12601)

3e-95

45) spiA
( YP_150710.1 )

outer membrane secretory protein

NC_006511
(Salmonella enterica ATCC 9150)

3e-95

46) SEEB0189_12565
( YP_008308828.1 )

outer membrane secretin SsaC

NC_021844
(Salmonella enterica CFSAN000189)

3e-95

47) SeD_A1948
( YP_002215736.1 )

type III secretion outer membrane pore, YscC/HrcC family

NC_011205
(Salmonella enterica CT_02021853)

3e-95

48) SPAB_01932
( YP_001588155.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

3e-95

49) SNSL254_A1506
( YP_002040647.1 )

type III secretion outer membrane pore, YscC/HrcC family

NC_011080
(Salmonella enterica SL254)

3e-95

50) SN31241_24650
( YP_008360381.1 )

Outer membrane protein SpiA

NC_021902
(Salmonella enterica USMARC-S3124.1)

3e-95

51) SE451236_12835
( YP_008265593.1 )

outer membrane secretin SsaC

NC_021820
(Salmonella enterica 08-1736)

3e-95

52) ssaC
( YP_005237263.1 )

outer membrane secretin precursor

NC_016856
(Salmonella enterica 14028S)

3e-95

53) spiA
( YP_005396793.1 )

outer membrane secretory protein

NC_017046
(Salmonella enterica 798)

3e-95

54) ssaC
( YP_008480882.1 )

putative outer membrane secretory protein

NC_022221
(Salmonella enterica CDC1983-67)

3e-95

55) CFSAN001921_10175
( YP_008255409.1 )

outer membrane secretin SsaC

NC_021814
(Salmonella enterica CFSAN001921)

3e-95

56) STMMW_13991
( YP_005232453.1 )

putative outer membrane secretory protein

NC_016854
(Salmonella enterica D23580)

3e-95

57) ssaC
( NP_460359.1 )

outer membrane secretin precursor

NC_003197
(Salmonella enterica LT2)

3e-95

58) ssaC
( YP_005212420.1 )

putative outer membrane secretory protein

NC_016831
(Salmonella enterica RKS5078)

3e-95

59) I137_05575
( YP_008380625.1 )

outer membrane secretin SsaC

NC_021984
(Salmonella enterica S06004)

3e-95

60) spiA
( YP_005181238.1 )

putative outer membrane secretory protein

NC_016810
(Salmonella enterica SL1344)

3e-95

61) SeAg_B1778
( YP_002146647.1 )

type III secretion outer membrane pore, YscC/HrcC family

NC_011149
(Salmonella enterica SL483)

3e-95

62) ssaC
( YP_005242295.1 )

outer membrane secretin precursor

NC_016857
(Salmonella enterica ST4/74)

3e-95

63) STMDT12_C14100
( YP_005247106.1 )

type III secretion outer membrane pore, YscC/HrcC family

NC_016860
(Salmonella enterica T000240)

3e-95

64) STU288_03290
( YP_007901763.1 )

outer membrane secretin SsaC

NC_021151
(Salmonella enterica U288)

3e-95

65) ssaC
( YP_005251898.1 )

outer membrane secretin precursor

NC_016863
(Salmonella enterica UK-1)

3e-95

66) SEEH1578_16205
( YP_008247300.1 )

outer membrane secretin SsaC

NC_021810
(Salmonella enterica 41578)

4e-95

67) SU5_02011
( YP_006087645.1 )

Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG)

NC_017623
(Salmonella enterica B182)

4e-95

68) CFSAN001992_04620
( YP_007470682.1 )

outer membrane secretin SsaC

NC_020307
(Salmonella enterica CFSAN001992)

4e-95

69) CFSAN002050_13365
( YP_008260584.1 )

outer membrane secretin SsaC

NC_021818
(Salmonella enterica CFSAN002050)

4e-95

70) CFSAN002069_02030
( YP_008249266.1 )

outer membrane secretin SsaC

NC_021812
(Salmonella enterica CFSAN002069)

4e-95

71) spiA
( NP_456134.1 )

putative outer membrane secretory protein

NC_003198
(Salmonella enterica CT18)

4e-95

72) SeSA_A1491
( YP_002114408.1 )

type III secretion outer membrane pore, YscC/HrcC family protein

NC_011094
(Salmonella enterica CVM19633)

4e-95

73) STBHUCCB_13530
( YP_005216911.1 )

outer membrane secretory protein

NC_016832
(Salmonella enterica P-stx-12)

4e-95

74) ssaC
( YP_002243751.1 )

outer membrane secretory protein

NC_011294
(Salmonella enterica P125109)

4e-95

75) spiA
( YP_002637893.1 )

outer membrane secretory protein

NC_012125
(Salmonella enterica RKS4594)

4e-95

76) ssaC
( YP_216402.1 )

secretion system apparatus protein SsaC

NC_006905
(Salmonella enterica SC-B67)

4e-95

77) SeHA_C1528
( YP_002045398.1 )

type III secretion outer membrane pore, YscC/HrcC family

NC_011083
(Salmonella enterica SL476)

4e-95

78) spiA
( NP_805065.1 )

outer membrane secretory protein

NC_004631
(Salmonella enterica Ty2)

4e-95

79) TY21A_06420
( YP_007925588.1 )

putative outer membrane secretory protein

NC_021176
(Salmonella enterica Ty21a)

4e-95

80) ssaC
( YP_002226691.1 )

outer membrane secretory protein

NC_011274
(Salmonella enterica 287/91)

5e-95

81) SG1282
( YP_454962.1 )

type III secretion apparatus

NC_007712
(Sodalis glossinidius morsitans)

2e-88

• Sequence Alignments

1) escC in NC_013353


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  792 bits (2999),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 496/512 (97%), Positives = 508/512 (99%), Gaps = 0/512 (0%)

Query  1    MKKISFFIFTALFCCSAQAAPSSLEKRLGKNEYFIITKSSPVRAILNDFAANYSIPVFIS  60
            MKKISFFIFTALFCCSAQAAPSSLEKRLGK+EYFIITKSSPVRAILNDFAANYSIPVFIS
Sbjct  1    MKKISFFIFTALFCCSAQAAPSSLEKRLGKSEYFIITKSSPVRAILNDFAANYSIPVFIS  60

Query  61   NSVNDDFSGEIKNEKPMKVLEKLSRLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS  120
            +SVNDDFSGEIKNEKP+KVLEKLS+LYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS
Sbjct  61   SSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS  120

Query  121  LLKYLRDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV  180
            LLKYL DTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV
Sbjct  121  LLKYLSDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV  180

Query  181  RVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERNGNLFDNSVK  240
            +VFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVER+GNLFDNSV 
Sbjct  181  KVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNSVT  240

Query  241  ISADPRLNAVVVKDREITMDIYRQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT  300
            ISADPRLNAVVVKDREITMDIY+QLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT
Sbjct  241  ISADPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT  300

Query  301  LNAGQGSIAFNSSTAQANLSSSVISNANNFMIRVNALQQNSKAKILSQPSIITLNNMQAI  360
            LNAGQG+IAFNSSTAQAN+SSSVISNA+NFMIRVNALQQNSKAKILSQPSIITLNNMQAI
Sbjct  301  LNAGQGTIAFNSSTAQANISSSVISNASNFMIRVNALQQNSKAKILSQPSIITLNNMQAI  360

Query  361  LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDNSNSLTGKRRERVRLLLDIQDGN  420
            LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDD+SNSLTGKRRERVRLLLDIQDGN
Sbjct  361  LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGN  420

Query  421  QSTNQSNAQDASSILPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV  480
            QSTNQSNAQDASS LPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV
Sbjct  421  QSTNQSNAQDASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV  480

Query  481  IGNLFSSTTKQKHSVVRLFLIKATPIKSASSE  512
            IG+LFSST KQKHSVVRLFLIKATPIKSASSE
Sbjct  481  IGSLFSSTVKQKHSVVRLFLIKATPIKSASSE  512

2) escC in NC_013361


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  792 bits (2999),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 496/512 (97%), Positives = 508/512 (99%), Gaps = 0/512 (0%)

Query  1    MKKISFFIFTALFCCSAQAAPSSLEKRLGKNEYFIITKSSPVRAILNDFAANYSIPVFIS  60
            MKKISFFIFTALFCCSAQAAPSSLEKRLGK+EYFIITKSSPVRAILNDFAANYSIPVFIS
Sbjct  1    MKKISFFIFTALFCCSAQAAPSSLEKRLGKSEYFIITKSSPVRAILNDFAANYSIPVFIS  60

Query  61   NSVNDDFSGEIKNEKPMKVLEKLSRLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS  120
            +SVNDDFSGEIKNEKP+KVLEKLS+LYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS
Sbjct  61   SSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS  120

Query  121  LLKYLRDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV  180
            LLKYL DTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV
Sbjct  121  LLKYLSDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV  180

Query  181  RVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERNGNLFDNSVK  240
            +VFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVER+GNLFDNSV 
Sbjct  181  KVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNSVT  240

Query  241  ISADPRLNAVVVKDREITMDIYRQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT  300
            ISADPRLNAVVVKDREITMDIY+QLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT
Sbjct  241  ISADPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT  300

Query  301  LNAGQGSIAFNSSTAQANLSSSVISNANNFMIRVNALQQNSKAKILSQPSIITLNNMQAI  360
            LNAGQG+IAFNSSTAQAN+SSSVISNA+NFMIRVNALQQNSKAKILSQPSIITLNNMQAI
Sbjct  301  LNAGQGTIAFNSSTAQANISSSVISNASNFMIRVNALQQNSKAKILSQPSIITLNNMQAI  360

Query  361  LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDNSNSLTGKRRERVRLLLDIQDGN  420
            LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDD+SNSLTGKRRERVRLLLDIQDGN
Sbjct  361  LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGN  420

Query  421  QSTNQSNAQDASSILPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV  480
            QSTNQSNAQDASS LPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV
Sbjct  421  QSTNQSNAQDASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV  480

Query  481  IGNLFSSTTKQKHSVVRLFLIKATPIKSASSE  512
            IG+LFSST KQKHSVVRLFLIKATPIKSASSE
Sbjct  481  IGSLFSSTVKQKHSVVRLFLIKATPIKSASSE  512

3) ECH74115_5069 in NC_011353


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  787 bits (2980),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 512/512 (100%), Positives = 512/512 (100%), Gaps = 0/512 (0%)

Query  1    MKKISFFIFTALFCCSAQAAPSSLEKRLGKSEYFIITKSSPVRAILNDFAANYSIPVFIS  60
            MKKISFFIFTALFCCSAQAAPSSLEKRLGKSEYFIITKSSPVRAILNDFAANYSIPVFIS
Sbjct  1    MKKISFFIFTALFCCSAQAAPSSLEKRLGKSEYFIITKSSPVRAILNDFAANYSIPVFIS  60

Query  61   SSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS  120
            SSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS
Sbjct  61   SSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS  120

Query  121  LLKYLSDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV  180
            LLKYLSDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV
Sbjct  121  LLKYLSDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV  180

Query  181  KVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNSVT  240
            KVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNSVT
Sbjct  181  KVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNSVT  240

Query  241  ISADPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT  300
            ISADPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT
Sbjct  241  ISADPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT  300

Query  301  LNAGQGTIAFNSSTAQanisssvisnasnFMIRVNALQQNSKAKILSQPSIITLNNMQAI  360
            LNAGQGTIAFNSSTAQANISSSVISNASNFMIRVNALQQNSKAKILSQPSIITLNNMQAI
Sbjct  301  LNAGQGTIAFNSSTAQANISSSVISNASNFMIRVNALQQNSKAKILSQPSIITLNNMQAI  360

Query  361  LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGN  420
            LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGN
Sbjct  361  LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGN  420

Query  421  QSTNQSNAQDASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV  480
            QSTNQSNAQDASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV
Sbjct  421  QSTNQSNAQDASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV  480

Query  481  IGSLFSSTVKQKHSVVRLFLIKATPIKSASSE  512
            IGSLFSSTVKQKHSVVRLFLIKATPIKSASSE
Sbjct  481  IGSLFSSTVKQKHSVVRLFLIKATPIKSASSE  512

4) escC in NC_002655


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  787 bits (2980),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 512/512 (100%), Positives = 512/512 (100%), Gaps = 0/512 (0%)

Query  1    MKKISFFIFTALFCCSAQAAPSSLEKRLGKSEYFIITKSSPVRAILNDFAANYSIPVFIS  60
            MKKISFFIFTALFCCSAQAAPSSLEKRLGKSEYFIITKSSPVRAILNDFAANYSIPVFIS
Sbjct  1    MKKISFFIFTALFCCSAQAAPSSLEKRLGKSEYFIITKSSPVRAILNDFAANYSIPVFIS  60

Query  61   SSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS  120
            SSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS
Sbjct  61   SSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS  120

Query  121  LLKYLSDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV  180
            LLKYLSDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV
Sbjct  121  LLKYLSDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV  180

Query  181  KVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNSVT  240
            KVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNSVT
Sbjct  181  KVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNSVT  240

Query  241  ISADPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT  300
            ISADPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT
Sbjct  241  ISADPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT  300

Query  301  LNAGQGTIAFNSSTAQanisssvisnasnFMIRVNALQQNSKAKILSQPSIITLNNMQAI  360
            LNAGQGTIAFNSSTAQANISSSVISNASNFMIRVNALQQNSKAKILSQPSIITLNNMQAI
Sbjct  301  LNAGQGTIAFNSSTAQANISSSVISNASNFMIRVNALQQNSKAKILSQPSIITLNNMQAI  360

Query  361  LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGN  420
            LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGN
Sbjct  361  LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGN  420

Query  421  QSTNQSNAQDASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV  480
            QSTNQSNAQDASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV
Sbjct  421  QSTNQSNAQDASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV  480

Query  481  IGSLFSSTVKQKHSVVRLFLIKATPIKSASSE  512
            IGSLFSSTVKQKHSVVRLFLIKATPIKSASSE
Sbjct  481  IGSLFSSTVKQKHSVVRLFLIKATPIKSASSE  512

5) ECs4575 in NC_002695


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  787 bits (2980),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 512/512 (100%), Positives = 512/512 (100%), Gaps = 0/512 (0%)

Query  1    MKKISFFIFTALFCCSAQAAPSSLEKRLGKSEYFIITKSSPVRAILNDFAANYSIPVFIS  60
            MKKISFFIFTALFCCSAQAAPSSLEKRLGKSEYFIITKSSPVRAILNDFAANYSIPVFIS
Sbjct  1    MKKISFFIFTALFCCSAQAAPSSLEKRLGKSEYFIITKSSPVRAILNDFAANYSIPVFIS  60

Query  61   SSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS  120
            SSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS
Sbjct  61   SSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS  120

Query  121  LLKYLSDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV  180
            LLKYLSDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV
Sbjct  121  LLKYLSDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV  180

Query  181  KVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNSVT  240
            KVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNSVT
Sbjct  181  KVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNSVT  240

Query  241  ISADPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT  300
            ISADPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT
Sbjct  241  ISADPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT  300

Query  301  LNAGQGTIAFNSSTAQanisssvisnasnFMIRVNALQQNSKAKILSQPSIITLNNMQAI  360
            LNAGQGTIAFNSSTAQANISSSVISNASNFMIRVNALQQNSKAKILSQPSIITLNNMQAI
Sbjct  301  LNAGQGTIAFNSSTAQANISSSVISNASNFMIRVNALQQNSKAKILSQPSIITLNNMQAI  360

Query  361  LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGN  420
            LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGN
Sbjct  361  LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGN  420

Query  421  QSTNQSNAQDASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV  480
            QSTNQSNAQDASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV
Sbjct  421  QSTNQSNAQDASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV  480

Query  481  IGSLFSSTVKQKHSVVRLFLIKATPIKSASSE  512
            IGSLFSSTVKQKHSVVRLFLIKATPIKSASSE
Sbjct  481  IGSLFSSTVKQKHSVVRLFLIKATPIKSASSE  512

6) escC in NC_013008


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  787 bits (2980),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 512/512 (100%), Positives = 512/512 (100%), Gaps = 0/512 (0%)

Query  1    MKKISFFIFTALFCCSAQAAPSSLEKRLGKSEYFIITKSSPVRAILNDFAANYSIPVFIS  60
            MKKISFFIFTALFCCSAQAAPSSLEKRLGKSEYFIITKSSPVRAILNDFAANYSIPVFIS
Sbjct  1    MKKISFFIFTALFCCSAQAAPSSLEKRLGKSEYFIITKSSPVRAILNDFAANYSIPVFIS  60

Query  61   SSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS  120
            SSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS
Sbjct  61   SSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS  120

Query  121  LLKYLSDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV  180
            LLKYLSDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV
Sbjct  121  LLKYLSDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV  180

Query  181  KVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNSVT  240
            KVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNSVT
Sbjct  181  KVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNSVT  240

Query  241  ISADPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT  300
            ISADPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT
Sbjct  241  ISADPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT  300

Query  301  LNAGQGTIAFNSSTAQanisssvisnasnFMIRVNALQQNSKAKILSQPSIITLNNMQAI  360
            LNAGQGTIAFNSSTAQANISSSVISNASNFMIRVNALQQNSKAKILSQPSIITLNNMQAI
Sbjct  301  LNAGQGTIAFNSSTAQANISSSVISNASNFMIRVNALQQNSKAKILSQPSIITLNNMQAI  360

Query  361  LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGN  420
            LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGN
Sbjct  361  LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGN  420

Query  421  QSTNQSNAQDASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV  480
            QSTNQSNAQDASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV
Sbjct  421  QSTNQSNAQDASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV  480

Query  481  IGSLFSSTVKQKHSVVRLFLIKATPIKSASSE  512
            IGSLFSSTVKQKHSVVRLFLIKATPIKSASSE
Sbjct  481  IGSLFSSTVKQKHSVVRLFLIKATPIKSASSE  512

7) escC in NC_013941


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  787 bits (2980),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 512/512 (100%), Positives = 512/512 (100%), Gaps = 0/512 (0%)

Query  1    MKKISFFIFTALFCCSAQAAPSSLEKRLGKSEYFIITKSSPVRAILNDFAANYSIPVFIS  60
            MKKISFFIFTALFCCSAQAAPSSLEKRLGKSEYFIITKSSPVRAILNDFAANYSIPVFIS
Sbjct  1    MKKISFFIFTALFCCSAQAAPSSLEKRLGKSEYFIITKSSPVRAILNDFAANYSIPVFIS  60

Query  61   SSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS  120
            SSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS
Sbjct  61   SSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS  120

Query  121  LLKYLSDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV  180
            LLKYLSDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV
Sbjct  121  LLKYLSDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV  180

Query  181  KVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNSVT  240
            KVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNSVT
Sbjct  181  KVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNSVT  240

Query  241  ISADPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT  300
            ISADPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT
Sbjct  241  ISADPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT  300

Query  301  LNAGQGTIAFNSSTAQanisssvisnasnFMIRVNALQQNSKAKILSQPSIITLNNMQAI  360
            LNAGQGTIAFNSSTAQANISSSVISNASNFMIRVNALQQNSKAKILSQPSIITLNNMQAI
Sbjct  301  LNAGQGTIAFNSSTAQANISSSVISNASNFMIRVNALQQNSKAKILSQPSIITLNNMQAI  360

Query  361  LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGN  420
            LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGN
Sbjct  361  LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGN  420

Query  421  QSTNQSNAQDASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV  480
            QSTNQSNAQDASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV
Sbjct  421  QSTNQSNAQDASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV  480

Query  481  IGSLFSSTVKQKHSVVRLFLIKATPIKSASSE  512
            IGSLFSSTVKQKHSVVRLFLIKATPIKSASSE
Sbjct  481  IGSLFSSTVKQKHSVVRLFLIKATPIKSASSE  512

8) ECO55CA74_21250 in NC_017656


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  787 bits (2980),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 512/512 (100%), Positives = 512/512 (100%), Gaps = 0/512 (0%)

Query  1    MKKISFFIFTALFCCSAQAAPSSLEKRLGKSEYFIITKSSPVRAILNDFAANYSIPVFIS  60
            MKKISFFIFTALFCCSAQAAPSSLEKRLGKSEYFIITKSSPVRAILNDFAANYSIPVFIS
Sbjct  1    MKKISFFIFTALFCCSAQAAPSSLEKRLGKSEYFIITKSSPVRAILNDFAANYSIPVFIS  60

Query  61   SSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS  120
            SSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS
Sbjct  61   SSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS  120

Query  121  LLKYLSDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV  180
            LLKYLSDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV
Sbjct  121  LLKYLSDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV  180

Query  181  KVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNSVT  240
            KVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNSVT
Sbjct  181  KVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNSVT  240

Query  241  ISADPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT  300
            ISADPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT
Sbjct  241  ISADPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT  300

Query  301  LNAGQGTIAFNSSTAQanisssvisnasnFMIRVNALQQNSKAKILSQPSIITLNNMQAI  360
            LNAGQGTIAFNSSTAQANISSSVISNASNFMIRVNALQQNSKAKILSQPSIITLNNMQAI
Sbjct  301  LNAGQGTIAFNSSTAQANISSSVISNASNFMIRVNALQQNSKAKILSQPSIITLNNMQAI  360

Query  361  LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGN  420
            LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGN
Sbjct  361  LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGN  420

Query  421  QSTNQSNAQDASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV  480
            QSTNQSNAQDASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV
Sbjct  421  QSTNQSNAQDASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV  480

Query  481  IGSLFSSTVKQKHSVVRLFLIKATPIKSASSE  512
            IGSLFSSTVKQKHSVVRLFLIKATPIKSASSE
Sbjct  481  IGSLFSSTVKQKHSVVRLFLIKATPIKSASSE  512

9) CDCO157_4310 in NC_017906


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  787 bits (2980),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 512/512 (100%), Positives = 512/512 (100%), Gaps = 0/512 (0%)

Query  1    MKKISFFIFTALFCCSAQAAPSSLEKRLGKSEYFIITKSSPVRAILNDFAANYSIPVFIS  60
            MKKISFFIFTALFCCSAQAAPSSLEKRLGKSEYFIITKSSPVRAILNDFAANYSIPVFIS
Sbjct  1    MKKISFFIFTALFCCSAQAAPSSLEKRLGKSEYFIITKSSPVRAILNDFAANYSIPVFIS  60

Query  61   SSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS  120
            SSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS
Sbjct  61   SSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS  120

Query  121  LLKYLSDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV  180
            LLKYLSDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV
Sbjct  121  LLKYLSDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV  180

Query  181  KVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNSVT  240
            KVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNSVT
Sbjct  181  KVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNSVT  240

Query  241  ISADPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT  300
            ISADPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT
Sbjct  241  ISADPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT  300

Query  301  LNAGQGTIAFNSSTAQanisssvisnasnFMIRVNALQQNSKAKILSQPSIITLNNMQAI  360
            LNAGQGTIAFNSSTAQANISSSVISNASNFMIRVNALQQNSKAKILSQPSIITLNNMQAI
Sbjct  301  LNAGQGTIAFNSSTAQANISSSVISNASNFMIRVNALQQNSKAKILSQPSIITLNNMQAI  360

Query  361  LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGN  420
            LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGN
Sbjct  361  LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGN  420

Query  421  QSTNQSNAQDASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV  480
            QSTNQSNAQDASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV
Sbjct  421  QSTNQSNAQDASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV  480

Query  481  IGSLFSSTVKQKHSVVRLFLIKATPIKSASSE  512
            IGSLFSSTVKQKHSVVRLFLIKATPIKSASSE
Sbjct  481  IGSLFSSTVKQKHSVVRLFLIKATPIKSASSE  512

10) escC in NC_011601


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  787 bits (2979),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 511/512 (99%), Positives = 512/512 (100%), Gaps = 0/512 (0%)

Query  1    MKKISFFIFTALFCCSAQAAPSSLEKRLGKNEYFIITKSSPVRAILNDFAANYSIPVFIS  60
            MKKISFFIFTALFCCSAQAAPSSLEKRLGK+EYFIITKSSPVRAILNDFAANYSIPVFIS
Sbjct  1    MKKISFFIFTALFCCSAQAAPSSLEKRLGKSEYFIITKSSPVRAILNDFAANYSIPVFIS  60

Query  61   SSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS  120
            SSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS
Sbjct  61   SSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS  120

Query  121  LLKYLSDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV  180
            LLKYLSDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV
Sbjct  121  LLKYLSDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV  180

Query  181  KVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNSVT  240
            KVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNSVT
Sbjct  181  KVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNSVT  240

Query  241  ISADPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT  300
            ISADPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT
Sbjct  241  ISADPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT  300

Query  301  LNAGQGTIAFNSSTAQanisssvisnasnFMIRVNALQQNSKAKILSQPSIITLNNMQAI  360
            LNAGQGTIAFNSSTAQANISSSVISNASNFMIRVNALQQNSKAKILSQPSIITLNNMQAI
Sbjct  301  LNAGQGTIAFNSSTAQANISSSVISNASNFMIRVNALQQNSKAKILSQPSIITLNNMQAI  360

Query  361  LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGN  420
            LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGN
Sbjct  361  LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGN  420

Query  421  QSTNQSNAQDASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV  480
            QSTNQSNAQDASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV
Sbjct  421  QSTNQSNAQDASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV  480

Query  481  IGSLFSSTVKQKHSVVRLFLIKATPIKSASSE  512
            IGSLFSSTVKQKHSVVRLFLIKATPIKSASSE
Sbjct  481  IGSLFSSTVKQKHSVVRLFLIKATPIKSASSE  512

11) escC in NC_013364


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  786 bits (2974),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 510/512 (99%), Positives = 511/512 (99%), Gaps = 0/512 (0%)

Query  1    MKKISFFIFTALFCCSAQAAPSSLEKRLGKNEYFIITKSSPVRVILNDFAANYSIPVFIS  60
            MKKISFFIFTALFCCSAQAAPSSLEKRLGK+EYFIITKSSPVR ILNDFAANYSIPVFIS
Sbjct  1    MKKISFFIFTALFCCSAQAAPSSLEKRLGKSEYFIITKSSPVRAILNDFAANYSIPVFIS  60

Query  61   SSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS  120
            SSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS
Sbjct  61   SSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS  120

Query  121  LLKYLSDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV  180
            LLKYLSDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV
Sbjct  121  LLKYLSDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV  180

Query  181  KVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNSVT  240
            KVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNSVT
Sbjct  181  KVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNSVT  240

Query  241  ISADPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT  300
            ISADPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT
Sbjct  241  ISADPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT  300

Query  301  LNAGQGTIAFNSSTAQanisssvisnasnFMIRVNALQQNSKAKILSQPSIITLNNMQAI  360
            LNAGQGTIAFNSSTAQANISSSVISNASNFMIRVNALQQNSKAKILSQPSIITLNNMQAI
Sbjct  301  LNAGQGTIAFNSSTAQANISSSVISNASNFMIRVNALQQNSKAKILSQPSIITLNNMQAI  360

Query  361  LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGN  420
            LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGN
Sbjct  361  LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGN  420

Query  421  QSTNQSNAQDASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV  480
            QSTNQSNAQDASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV
Sbjct  421  QSTNQSNAQDASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV  480

Query  481  IGSLFSSTVKQKHSVVRLFLIKATPIKSASSE  512
            IGSLFSSTVKQKHSVVRLFLIKATPIKSASSE
Sbjct  481  IGSLFSSTVKQKHSVVRLFLIKATPIKSASSE  512

12) escC in NC_013716


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  744 bits (2816),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 491/512 (96%), Positives = 503/512 (99%), Gaps = 0/512 (0%)

Query  1    MKKISLFIFTALFFCNTQAAPSSLEKRLGESEYFIITKSSPVSVILNDFAANYSIPVFIS  60
            MKKIS+FIFTALF C++QAAPSSLEKRLG SEYFIITKSSPV  ILNDFAANYSIPVFIS
Sbjct  1    MKKISFFIFTALFCCSAQAAPSSLEKRLGKSEYFIITKSSPVRAILNDFAANYSIPVFIS  60

Query  61   NSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS  120
            +SVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS
Sbjct  61   SSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDS  120

Query  121  LLKYLRDTISVNKSSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV  180
            LLKYL DTISVNK+SCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV
Sbjct  121  LLKYLSDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVV  180

Query  181  KVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNSVN  240
            KVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNSV 
Sbjct  181  KVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNSVT  240

Query  241  ISADPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT  300
            ISADPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT
Sbjct  241  ISADPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGT  300

Query  301  LNAGQssiafnssaaqanisssvisnasnFMIRVNALQQNSKAKILSQPSIITLNNMQAI  360
            LNAGQ++IAFNSS+AQANISSSVISNASNFMIRVNALQQNSKAKILSQPSIITLNNMQAI
Sbjct  301  LNAGQGTIAFNSSTAQANISSSVISNASNFMIRVNALQQNSKAKILSQPSIITLNNMQAI  360

Query  361  LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDTSNSLTGKRRERVRLLLDIQDGN  420
            LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDD+SNSLTGKRRERVRLLLDIQDGN
Sbjct  361  LDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGN  420

Query  421  QSVNQSNIQNAGSLLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV  480
            QS NQSN Q+A+S LPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV
Sbjct  421  QSTNQSNAQDASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV  480

Query  481  IGSLFSSTVKQKHSVVRLFLIKATPIRSASSE  512
            IGSLFSSTVKQKHSVVRLFLIKATPI+SASSE
Sbjct  481  IGSLFSSTVKQKHSVVRLFLIKATPIKSASSE  512

13) YE105_C0312 in NC_015224


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  396 bits (1488),  Expect = 2e-111, Method: Compositional matrix adjust.
 Identities = 240/482 (50%), Positives = 359/482 (75%), Gaps = 22/482 (4%)

Query  28   FFIYSRGMKVTNLLNDLGVNYGIPVVVSPEINEKFSGKIVDKTPDQILSELAGLYNITWY  87
            +FI +++  V  +LND++ NY+IPV +S+ +N+ FSG I +  P ++L  L+ LY++TWY
Sbjct  33   YFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWY  92

Query  88   YDGDILYFYKTQSIKREFISPDGLSTGTLIKYLKQSGVPAGKNCAVQAVSRLNAIEVTGV  147
            YD +ILY+YKT+ I R +I+P  L  ++L+KYL ++     ++C V+ ++ +N+IEV GV
Sbjct  93   YDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEVRGV  152

Query  148  PICIERVTSLTKMLSSQVRKQNQNKETVKVFQLKYASAADSTYQYRDQQVQLPGLVSVLR  207
            P CI  +TSL+  L  + + + +NK+ VKVF+L+YASA+D TY+YRDQ+V +PG+VS+L+
Sbjct  153  PECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVSILK  212

Query  208  EMSAGNHLPLAGEKESEDAPVSAPLF------SADPRQNAVIIRDRQANMPLYSSLITQL  261
             M++   LP +G    E    S+ LF      SADPR NAV+++DR+  M +Y  LI++L
Sbjct  213  TMASNGSLPSTGKGAVER---SGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  262  DQRPVQIEISVTIIDVDAGDISQLGIDWSASTSIGGAGVSFNSGEAAPHSDGFSTVIGNT  321
            D    QIEISV+IIDVDA D+ QLG++WS++ + G + ++FNS+ A ++    S+VI+N+
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  322  GNFMVRLNALQKNSRARVLSRPSVVTLNNIQAVLDKNVTFYTKLQGDKVAKLESITSGSL  381
            +NFM+R+NALQ+NS+A++LS+PS++TLNN+QA+LDKNVTFYTK+ G+KVA LESITSG+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  382  LRVTPRMIDSDGVK-------EVLLNLNIQDGQQQAPLSSSE----PLPEIQNSDISTQA  430
            LRVTPR++D  +          V L L+IQDG+Q +  S+++     LPE+QNS+++T+A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  431  TLRVGQSLLLGGFIQDKQIESQNKipllgdipllgglFRSTNKQSHSVVRLFLIKAVPVN  490
            TL  G+SLLLGGFIQDK+  S++ IPLL+DIP++G+LF ST KQ HSVVRLFLIKA P++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  491  TG  492
            ++
Sbjct  508  SA  509

14) Y11_35201 in NC_017564


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  396 bits (1488),  Expect = 2e-111, Method: Compositional matrix adjust.
 Identities = 240/482 (50%), Positives = 359/482 (75%), Gaps = 22/482 (4%)

Query  28   FFIYSRGMKVTNLLNDLGVNYGIPVVVSPEINEKFSGKIVDKTPDQILSELAGLYNITWY  87
            +FI +++  V  +LND++ NY+IPV +S+ +N+ FSG I +  P ++L  L+ LY++TWY
Sbjct  33   YFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWY  92

Query  88   YDGDILYFYKTQSIKREFISPDGLSTGTLIKYLKQSGVPAGKNCAVQAVSRLNAIEVTGV  147
            YD +ILY+YKT+ I R +I+P  L  ++L+KYL ++     ++C V+ ++ +N+IEV GV
Sbjct  93   YDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEVRGV  152

Query  148  PICIERVTSLTKMLSSQVRKQNQNKETVKVFQLKYASAADSTYQYRDQQVQLPGLVSVLR  207
            P CI  +TSL+  L  + + + +NK+ VKVF+L+YASA+D TY+YRDQ+V +PG+VS+L+
Sbjct  153  PECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVSILK  212

Query  208  EMSAGNHLPLAGEKESEDAPVSAPLF------SADPRQNAVIIRDRQANMPLYSSLITQL  261
             M++   LP +G    E    S+ LF      SADPR NAV+++DR+  M +Y  LI++L
Sbjct  213  TMASNGSLPSTGKGAVER---SGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  262  DQRPVQIEISVTIIDVDAGDISQLGIDWSASTSIGGAGVSFNSGEAAPHSDGFSTVIGNT  321
            D    QIEISV+IIDVDA D+ QLG++WS++ + G + ++FNS+ A ++    S+VI+N+
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  322  GNFMVRLNALQKNSRARVLSRPSVVTLNNIQAVLDKNVTFYTKLQGDKVAKLESITSGSL  381
            +NFM+R+NALQ+NS+A++LS+PS++TLNN+QA+LDKNVTFYTK+ G+KVA LESITSG+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  382  LRVTPRMIDSDGVK-------EVLLNLNIQDGQQQAPLSSSE----PLPEIQNSDISTQA  430
            LRVTPR++D  +          V L L+IQDG+Q +  S+++     LPE+QNS+++T+A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  431  TLRVGQSLLLGGFIQDKQIESQNKipllgdipllgglFRSTNKQSHSVVRLFLIKAVPVN  490
            TL  G+SLLLGGFIQDK+  S++ IPLL+DIP++G+LF ST KQ HSVVRLFLIKA P++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  491  TG  492
            ++
Sbjct  508  SA  509

15) YpsIP31758_3830 in NC_009708


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  384 bits (1443),  Expect = 7e-108, Method: Compositional matrix adjust.
 Identities = 232/479 (49%), Positives = 354/479 (74%), Gaps = 16/479 (3%)

Query  40   FFIYSRGMTVSELLKDLGMNYGIPVVISSEINEHFTGKIRDKTPEKILSELAGRYNITWY  99
            +FI +++  V  +L+D++ NY+IPV ISS +N++F+G I++  P K+L  L+  Y++TWY
Sbjct  33   YFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWY  92

Query  100  YDGETLYFYPVQSIKREFISPDGLAANTLVKYLQRGDVLAGKNCAIKAIPHLDTLEVKGV  159
            YD + LY+Y  + I R +I+P  L  ++L+KYL     +  ++C ++ I  ++++EV+GV
Sbjct  93   YDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEVRGV  152

Query  160  PICIERVKSVSKMLSEQVRHQNQNKETVKVFPLKYASAADSDYQYRDQNVRLPGLVSVLR  219
            P CI  + S+S  L  + + + +NK+ VKVF L+YASA+D  Y+YRDQNV +PG+VS+L+
Sbjct  153  PECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVSILK  212

Query  220  ELNQGNNLPLA--GGNQPDGNQ-ASSPVFSADPRQNAVIIRDRQANMPIYRSLITQLDQR  276
             +    +LP +  G+ +  GN   +S  +SADPR NAV+++DR+  M IY+ LI++LD  
Sbjct  213  TMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISELDIE  272

Query  277  PIQIEISVTIIDVDAGDISQLGVDWSASASIGGTGVSFNSTFAKNNAEGFSTVIGDTGNF  336
              QIEISV+IIDVDA D+ QLGV+WS++ + G   ++FNS+ A+ N    S+VI++++NF
Sbjct  273  QRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNASNF  330

Query  337  MVRLNALQKNSRARILSQPSVVTLNNIQAVLDKNVTFYTKLQGEKVAKLESVTSGSLLRV  396
            M+R+NALQ+NS+A+ILSQPS++TLNN+QA+LDKNVTFYTK+ GEKVA LES+TSG+LLRV
Sbjct  331  MIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTLLRV  390

Query  397  TPRMIETEGV-------QEVLLNLNIQDGQQQA----STNSNEPLPEIRNSDISTQATLQ  445
            TPR+++  +        + V L L+IQDG+Q +    + +++  LPE++NS+++T+ATL 
Sbjct  391  TPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEATLS  450

Query  446  VGQSLLLGGFIQDTQIESQNKipllgdipllgglFRSTDKQSHSVVRLFLIKAVPVNAG  504
             G+SLLLGGFIQD +  S++ IPLL+DIP++G+LF ST KQ HSVVRLFLIKA P++++
Sbjct  451  AGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIKSA  509

16) YPTS_0336 in NC_010634


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  384 bits (1443),  Expect = 7e-108, Method: Compositional matrix adjust.
 Identities = 232/479 (49%), Positives = 354/479 (74%), Gaps = 16/479 (3%)

Query  40   FFIYSRGMTVSELLKDLGMNYGIPVVISSEINEHFTGKIRDKTPEKILSELAGRYNITWY  99
            +FI +++  V  +L+D++ NY+IPV ISS +N++F+G I++  P K+L  L+  Y++TWY
Sbjct  33   YFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWY  92

Query  100  YDGETLYFYPVQSIKREFISPDGLAANTLVKYLQRGDVLAGKNCAIKAIPHLDTLEVKGV  159
            YD + LY+Y  + I R +I+P  L  ++L+KYL     +  ++C ++ I  ++++EV+GV
Sbjct  93   YDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEVRGV  152

Query  160  PICIERVKSVSKMLSEQVRHQNQNKETVKVFPLKYASAADSDYQYRDQNVRLPGLVSVLR  219
            P CI  + S+S  L  + + + +NK+ VKVF L+YASA+D  Y+YRDQNV +PG+VS+L+
Sbjct  153  PECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVSILK  212

Query  220  ELNQGNNLPLA--GGNQPDGNQ-ASSPVFSADPRQNAVIIRDRQANMPIYRSLITQLDQR  276
             +    +LP +  G+ +  GN   +S  +SADPR NAV+++DR+  M IY+ LI++LD  
Sbjct  213  TMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISELDIE  272

Query  277  PIQIEISVTIIDVDAGDISQLGVDWSASASIGGTGVSFNSTFAKNNAEGFSTVIGDTGNF  336
              QIEISV+IIDVDA D+ QLGV+WS++ + G   ++FNS+ A+ N    S+VI++++NF
Sbjct  273  QRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNASNF  330

Query  337  MVRLNALQKNSRARILSQPSVVTLNNIQAVLDKNVTFYTKLQGEKVAKLESVTSGSLLRV  396
            M+R+NALQ+NS+A+ILSQPS++TLNN+QA+LDKNVTFYTK+ GEKVA LES+TSG+LLRV
Sbjct  331  MIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTLLRV  390

Query  397  TPRMIETEGV-------QEVLLNLNIQDGQQQA----STNSNEPLPEIRNSDISTQATLQ  445
            TPR+++  +        + V L L+IQDG+Q +    + +++  LPE++NS+++T+ATL 
Sbjct  391  TPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEATLS  450

Query  446  VGQSLLLGGFIQDTQIESQNKipllgdipllgglFRSTDKQSHSVVRLFLIKAVPVNAG  504
             G+SLLLGGFIQD +  S++ IPLL+DIP++G+LF ST KQ HSVVRLFLIKA P++++
Sbjct  451  AGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIKSA  509

17) YPK_3917 in NC_010465


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  384 bits (1443),  Expect = 7e-108, Method: Compositional matrix adjust.
 Identities = 232/479 (49%), Positives = 354/479 (74%), Gaps = 16/479 (3%)

Query  40   FFIYSRGMTVSELLKDLGMNYGIPVVISSEINEHFTGKIRDKTPEKILSELAGRYNITWY  99
            +FI +++  V  +L+D++ NY+IPV ISS +N++F+G I++  P K+L  L+  Y++TWY
Sbjct  33   YFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWY  92

Query  100  YDGETLYFYPVQSIKREFISPDGLAANTLVKYLQRGDVLAGKNCAIKAIPHLDTLEVKGV  159
            YD + LY+Y  + I R +I+P  L  ++L+KYL     +  ++C ++ I  ++++EV+GV
Sbjct  93   YDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEVRGV  152

Query  160  PICIERVKSVSKMLSEQVRHQNQNKETVKVFPLKYASAADSDYQYRDQNVRLPGLVSVLR  219
            P CI  + S+S  L  + + + +NK+ VKVF L+YASA+D  Y+YRDQNV +PG+VS+L+
Sbjct  153  PECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVSILK  212

Query  220  ELNQGNNLPLA--GGNQPDGNQ-ASSPVFSADPRQNAVIIRDRQANMPIYRSLITQLDQR  276
             +    +LP +  G+ +  GN   +S  +SADPR NAV+++DR+  M IY+ LI++LD  
Sbjct  213  TMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISELDIE  272

Query  277  PIQIEISVTIIDVDAGDISQLGVDWSASASIGGTGVSFNSTFAKNNAEGFSTVIGDTGNF  336
              QIEISV+IIDVDA D+ QLGV+WS++ + G   ++FNS+ A+ N    S+VI++++NF
Sbjct  273  QRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNASNF  330

Query  337  MVRLNALQKNSRARILSQPSVVTLNNIQAVLDKNVTFYTKLQGEKVAKLESVTSGSLLRV  396
            M+R+NALQ+NS+A+ILSQPS++TLNN+QA+LDKNVTFYTK+ GEKVA LES+TSG+LLRV
Sbjct  331  MIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTLLRV  390

Query  397  TPRMIETEGV-------QEVLLNLNIQDGQQQA----STNSNEPLPEIRNSDISTQATLQ  445
            TPR+++  +        + V L L+IQDG+Q +    + +++  LPE++NS+++T+ATL 
Sbjct  391  TPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEATLS  450

Query  446  VGQSLLLGGFIQDTQIESQNKipllgdipllgglFRSTDKQSHSVVRLFLIKAVPVNAG  504
             G+SLLLGGFIQD +  S++ IPLL+DIP++G+LF ST KQ HSVVRLFLIKA P++++
Sbjct  451  AGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIKSA  509

18) A1122_03860 in NC_017168


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  383 bits (1441),  Expect = 9e-108, Method: Compositional matrix adjust.
 Identities = 232/479 (49%), Positives = 354/479 (74%), Gaps = 16/479 (3%)

Query  40   FFIYSRGMTVSELLKDLGMNYGIPVVISSEINEHFTGKIRDKTPEKILSELAGRYNITWY  99
            +FI +++  V  +L+D++ NY+IPV ISS +N++F+G I++  P K+L  L+  Y++TWY
Sbjct  33   YFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWY  92

Query  100  YDGETLYFYPVQSIKREFISPDGLAANTLVKYLQRGDVLAGKNCAIKAIPHLDTLEVKGV  159
            YD + LY+Y  + I R +I+P  L  ++L+KYL     +  ++C ++ I  ++++EV+GV
Sbjct  93   YDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEVRGV  152

Query  160  PICIERVKSVSKMLSEQVRHQNQNKETVKVFPLKYASAADSDYQYRDQNVRLPGLVSVLR  219
            P CI  + S+S  L  + + + +NK+ VKVF L+YASA+D  Y+YRDQNV +PG+VS+L+
Sbjct  153  PECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVSILK  212

Query  220  ELNQGNNLPLA--GGNQPDGNQ-ASSPVFSADPRQNAVIIRDRQANMPIYRSLITQLDQR  276
             +    +LP +  G+ +  GN   +S  +SADPR NAV+++DR+  M IY+ LI++LD  
Sbjct  213  TMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISELDIE  272

Query  277  PIQIEISVTIIDVDAGDISQLGVDWSASASIGGTGVSFNSTFAKNNAEGFSTVIGDTGNF  336
              QIEISV+IIDVDA D+ QLGV+WS++ + G   ++FNS+ A+ N    S+VI++++NF
Sbjct  273  QRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNASNF  330

Query  337  MVRLNALQKNSRARILSQPSVVTLNNIQAVLDKNVTFYTKLQGEKVAKLESVTSGSLLRV  396
            M+R+NALQ+NS+A+ILSQPS++TLNN+QA+LDKNVTFYTK+ GEKVA LES+TSG+LLRV
Sbjct  331  MIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTLLRV  390

Query  397  TPRMIETEGV-------QEVLLNLNIQDGQQQA----STNSNEPLPEIRNSDISTQATLQ  445
            TPR+++  +        + V L L+IQDG+Q +    + +++  LPE++NS+++T+ATL 
Sbjct  391  TPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEATLS  450

Query  446  VGQSLLLGGFIQDTQIESQNKipllgdipllgglFRSTDKQSHSVVRLFLIKAVPVNAG  504
             G+SLLLGGFIQD +  S++ IPLL+DIP++G+LF ST KQ HSVVRLFLIKA P++++
Sbjct  451  AGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIKSA  509

19) YPA_4027 in NC_008150


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  383 bits (1441),  Expect = 9e-108, Method: Compositional matrix adjust.
 Identities = 232/479 (49%), Positives = 354/479 (74%), Gaps = 16/479 (3%)

Query  40   FFIYSRGMTVSELLKDLGMNYGIPVVISSEINEHFTGKIRDKTPEKILSELAGRYNITWY  99
            +FI +++  V  +L+D++ NY+IPV ISS +N++F+G I++  P K+L  L+  Y++TWY
Sbjct  33   YFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWY  92

Query  100  YDGETLYFYPVQSIKREFISPDGLAANTLVKYLQRGDVLAGKNCAIKAIPHLDTLEVKGV  159
            YD + LY+Y  + I R +I+P  L  ++L+KYL     +  ++C ++ I  ++++EV+GV
Sbjct  93   YDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEVRGV  152

Query  160  PICIERVKSVSKMLSEQVRHQNQNKETVKVFPLKYASAADSDYQYRDQNVRLPGLVSVLR  219
            P CI  + S+S  L  + + + +NK+ VKVF L+YASA+D  Y+YRDQNV +PG+VS+L+
Sbjct  153  PECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVSILK  212

Query  220  ELNQGNNLPLA--GGNQPDGNQ-ASSPVFSADPRQNAVIIRDRQANMPIYRSLITQLDQR  276
             +    +LP +  G+ +  GN   +S  +SADPR NAV+++DR+  M IY+ LI++LD  
Sbjct  213  TMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISELDIE  272

Query  277  PIQIEISVTIIDVDAGDISQLGVDWSASASIGGTGVSFNSTFAKNNAEGFSTVIGDTGNF  336
              QIEISV+IIDVDA D+ QLGV+WS++ + G   ++FNS+ A+ N    S+VI++++NF
Sbjct  273  QRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNASNF  330

Query  337  MVRLNALQKNSRARILSQPSVVTLNNIQAVLDKNVTFYTKLQGEKVAKLESVTSGSLLRV  396
            M+R+NALQ+NS+A+ILSQPS++TLNN+QA+LDKNVTFYTK+ GEKVA LES+TSG+LLRV
Sbjct  331  MIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTLLRV  390

Query  397  TPRMIETEGV-------QEVLLNLNIQDGQQQA----STNSNEPLPEIRNSDISTQATLQ  445
            TPR+++  +        + V L L+IQDG+Q +    + +++  LPE++NS+++T+ATL 
Sbjct  391  TPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEATLS  450

Query  446  VGQSLLLGGFIQDTQIESQNKipllgdipllgglFRSTDKQSHSVVRLFLIKAVPVNAG  504
             G+SLLLGGFIQD +  S++ IPLL+DIP++G+LF ST KQ HSVVRLFLIKA P++++
Sbjct  451  AGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIKSA  509

20) YPN_3412 in NC_008149


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  383 bits (1441),  Expect = 9e-108, Method: Compositional matrix adjust.
 Identities = 232/479 (49%), Positives = 354/479 (74%), Gaps = 16/479 (3%)

Query  40   FFIYSRGMTVSELLKDLGMNYGIPVVISSEINEHFTGKIRDKTPEKILSELAGRYNITWY  99
            +FI +++  V  +L+D++ NY+IPV ISS +N++F+G I++  P K+L  L+  Y++TWY
Sbjct  33   YFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWY  92

Query  100  YDGETLYFYPVQSIKREFISPDGLAANTLVKYLQRGDVLAGKNCAIKAIPHLDTLEVKGV  159
            YD + LY+Y  + I R +I+P  L  ++L+KYL     +  ++C ++ I  ++++EV+GV
Sbjct  93   YDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEVRGV  152

Query  160  PICIERVKSVSKMLSEQVRHQNQNKETVKVFPLKYASAADSDYQYRDQNVRLPGLVSVLR  219
            P CI  + S+S  L  + + + +NK+ VKVF L+YASA+D  Y+YRDQNV +PG+VS+L+
Sbjct  153  PECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVSILK  212

Query  220  ELNQGNNLPLA--GGNQPDGNQ-ASSPVFSADPRQNAVIIRDRQANMPIYRSLITQLDQR  276
             +    +LP +  G+ +  GN   +S  +SADPR NAV+++DR+  M IY+ LI++LD  
Sbjct  213  TMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISELDIE  272

Query  277  PIQIEISVTIIDVDAGDISQLGVDWSASASIGGTGVSFNSTFAKNNAEGFSTVIGDTGNF  336
              QIEISV+IIDVDA D+ QLGV+WS++ + G   ++FNS+ A+ N    S+VI++++NF
Sbjct  273  QRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNASNF  330

Query  337  MVRLNALQKNSRARILSQPSVVTLNNIQAVLDKNVTFYTKLQGEKVAKLESVTSGSLLRV  396
            M+R+NALQ+NS+A+ILSQPS++TLNN+QA+LDKNVTFYTK+ GEKVA LES+TSG+LLRV
Sbjct  331  MIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTLLRV  390

Query  397  TPRMIETEGV-------QEVLLNLNIQDGQQQA----STNSNEPLPEIRNSDISTQATLQ  445
            TPR+++  +        + V L L+IQDG+Q +    + +++  LPE++NS+++T+ATL 
Sbjct  391  TPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEATLS  450

Query  446  VGQSLLLGGFIQDTQIESQNKipllgdipllgglFRSTDKQSHSVVRLFLIKAVPVNAG  504
             G+SLLLGGFIQD +  S++ IPLL+DIP++G+LF ST KQ HSVVRLFLIKA P++++
Sbjct  451  AGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIKSA  509

21) YPDSF_3714 in NC_009381


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  383 bits (1441),  Expect = 9e-108, Method: Compositional matrix adjust.
 Identities = 232/479 (49%), Positives = 354/479 (74%), Gaps = 16/479 (3%)

Query  40   FFIYSRGMTVSELLKDLGMNYGIPVVISSEINEHFTGKIRDKTPEKILSELAGRYNITWY  99
            +FI +++  V  +L+D++ NY+IPV ISS +N++F+G I++  P K+L  L+  Y++TWY
Sbjct  33   YFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWY  92

Query  100  YDGETLYFYPVQSIKREFISPDGLAANTLVKYLQRGDVLAGKNCAIKAIPHLDTLEVKGV  159
            YD + LY+Y  + I R +I+P  L  ++L+KYL     +  ++C ++ I  ++++EV+GV
Sbjct  93   YDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEVRGV  152

Query  160  PICIERVKSVSKMLSEQVRHQNQNKETVKVFPLKYASAADSDYQYRDQNVRLPGLVSVLR  219
            P CI  + S+S  L  + + + +NK+ VKVF L+YASA+D  Y+YRDQNV +PG+VS+L+
Sbjct  153  PECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVSILK  212

Query  220  ELNQGNNLPLA--GGNQPDGNQ-ASSPVFSADPRQNAVIIRDRQANMPIYRSLITQLDQR  276
             +    +LP +  G+ +  GN   +S  +SADPR NAV+++DR+  M IY+ LI++LD  
Sbjct  213  TMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISELDIE  272

Query  277  PIQIEISVTIIDVDAGDISQLGVDWSASASIGGTGVSFNSTFAKNNAEGFSTVIGDTGNF  336
              QIEISV+IIDVDA D+ QLGV+WS++ + G   ++FNS+ A+ N    S+VI++++NF
Sbjct  273  QRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNASNF  330

Query  337  MVRLNALQKNSRARILSQPSVVTLNNIQAVLDKNVTFYTKLQGEKVAKLESVTSGSLLRV  396
            M+R+NALQ+NS+A+ILSQPS++TLNN+QA+LDKNVTFYTK+ GEKVA LES+TSG+LLRV
Sbjct  331  MIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTLLRV  390

Query  397  TPRMIETEGV-------QEVLLNLNIQDGQQQA----STNSNEPLPEIRNSDISTQATLQ  445
            TPR+++  +        + V L L+IQDG+Q +    + +++  LPE++NS+++T+ATL 
Sbjct  391  TPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEATLS  450

Query  446  VGQSLLLGGFIQDTQIESQNKipllgdipllgglFRSTDKQSHSVVRLFLIKAVPVNAG  504
             G+SLLLGGFIQD +  S++ IPLL+DIP++G+LF ST KQ HSVVRLFLIKA P++++
Sbjct  451  AGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIKSA  509

22) YPC_0752 in NC_017265


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  382 bits (1437),  Expect = 2e-107, Method: Compositional matrix adjust.
 Identities = 232/479 (49%), Positives = 354/479 (74%), Gaps = 16/479 (3%)

Query  58   FFIYSRGMTVSELLKDLGMNYGIPVVISSEINEHFTGKIRDKTPEKILSELAGRYNITWY  117
            +FI +++  V  +L+D++ NY+IPV ISS +N++F+G I++  P K+L  L+  Y++TWY
Sbjct  33   YFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWY  92

Query  118  YDGETLYFYPVQSIKREFISPDGLAANTLVKYLQRGDVLAGKNCAIKAIPHLDTLEVKGV  177
            YD + LY+Y  + I R +I+P  L  ++L+KYL     +  ++C ++ I  ++++EV+GV
Sbjct  93   YDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEVRGV  152

Query  178  PICIERVKSVSKMLSEQVRHQNQNKETVKVFPLKYASAADSDYQYRDQNVRLPGLVSVLR  237
            P CI  + S+S  L  + + + +NK+ VKVF L+YASA+D  Y+YRDQNV +PG+VS+L+
Sbjct  153  PECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVSILK  212

Query  238  ELNQGNNLPLA--GGNQPDGNQ-ASSPVFSADPRQNAVIIRDRQANMPIYRSLITQLDQR  294
             +    +LP +  G+ +  GN   +S  +SADPR NAV+++DR+  M IY+ LI++LD  
Sbjct  213  TMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISELDIE  272

Query  295  PIQIEISVTIIDVDAGDISQLGVDWSASASIGGTGVSFNSTFAKNNAEGFSTVIGDTGNF  354
              QIEISV+IIDVDA D+ QLGV+WS++ + G   ++FNS+ A+ N    S+VI++++NF
Sbjct  273  QRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNASNF  330

Query  355  MVRLNALQKNSRARILSQPSVVTLNNIQAVLDKNVTFYTKLQGEKVAKLESVTSGSLLRV  414
            M+R+NALQ+NS+A+ILSQPS++TLNN+QA+LDKNVTFYTK+ GEKVA LES+TSG+LLRV
Sbjct  331  MIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTLLRV  390

Query  415  TPRMIETEGV-------QEVLLNLNIQDGQQQA----STNSNEPLPEIRNSDISTQATLQ  463
            TPR+++  +        + V L L+IQDG+Q +    + +++  LPE++NS+++T+ATL 
Sbjct  391  TPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEATLS  450

Query  464  VGQSLLLGGFIQDTQIESQNKipllgdipllgglFRSTDKQSHSVVRLFLIKAVPVNAG  522
             G+SLLLGGFIQD +  S++ IPLL+DIP++G+LF ST KQ HSVVRLFLIKA P++++
Sbjct  451  AGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIKSA  509

23) gspD2 in NC_005810


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  382 bits (1437),  Expect = 2e-107, Method: Compositional matrix adjust.
 Identities = 232/479 (49%), Positives = 354/479 (74%), Gaps = 16/479 (3%)

Query  58   FFIYSRGMTVSELLKDLGMNYGIPVVISSEINEHFTGKIRDKTPEKILSELAGRYNITWY  117
            +FI +++  V  +L+D++ NY+IPV ISS +N++F+G I++  P K+L  L+  Y++TWY
Sbjct  33   YFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWY  92

Query  118  YDGETLYFYPVQSIKREFISPDGLAANTLVKYLQRGDVLAGKNCAIKAIPHLDTLEVKGV  177
            YD + LY+Y  + I R +I+P  L  ++L+KYL     +  ++C ++ I  ++++EV+GV
Sbjct  93   YDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEVRGV  152

Query  178  PICIERVKSVSKMLSEQVRHQNQNKETVKVFPLKYASAADSDYQYRDQNVRLPGLVSVLR  237
            P CI  + S+S  L  + + + +NK+ VKVF L+YASA+D  Y+YRDQNV +PG+VS+L+
Sbjct  153  PECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVSILK  212

Query  238  ELNQGNNLPLA--GGNQPDGNQ-ASSPVFSADPRQNAVIIRDRQANMPIYRSLITQLDQR  294
             +    +LP +  G+ +  GN   +S  +SADPR NAV+++DR+  M IY+ LI++LD  
Sbjct  213  TMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISELDIE  272

Query  295  PIQIEISVTIIDVDAGDISQLGVDWSASASIGGTGVSFNSTFAKNNAEGFSTVIGDTGNF  354
              QIEISV+IIDVDA D+ QLGV+WS++ + G   ++FNS+ A+ N    S+VI++++NF
Sbjct  273  QRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNASNF  330

Query  355  MVRLNALQKNSRARILSQPSVVTLNNIQAVLDKNVTFYTKLQGEKVAKLESVTSGSLLRV  414
            M+R+NALQ+NS+A+ILSQPS++TLNN+QA+LDKNVTFYTK+ GEKVA LES+TSG+LLRV
Sbjct  331  MIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTLLRV  390

Query  415  TPRMIETEGV-------QEVLLNLNIQDGQQQA----STNSNEPLPEIRNSDISTQATLQ  463
            TPR+++  +        + V L L+IQDG+Q +    + +++  LPE++NS+++T+ATL 
Sbjct  391  TPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEATLS  450

Query  464  VGQSLLLGGFIQDTQIESQNKipllgdipllgglFRSTDKQSHSVVRLFLIKAVPVNAG  522
             G+SLLLGGFIQD +  S++ IPLL+DIP++G+LF ST KQ HSVVRLFLIKA P++++
Sbjct  451  AGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIKSA  509

24) YPO0257 in NC_003143


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  382 bits (1437),  Expect = 2e-107, Method: Compositional matrix adjust.
 Identities = 232/479 (49%), Positives = 354/479 (74%), Gaps = 16/479 (3%)

Query  58   FFIYSRGMTVSELLKDLGMNYGIPVVISSEINEHFTGKIRDKTPEKILSELAGRYNITWY  117
            +FI +++  V  +L+D++ NY+IPV ISS +N++F+G I++  P K+L  L+  Y++TWY
Sbjct  33   YFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWY  92

Query  118  YDGETLYFYPVQSIKREFISPDGLAANTLVKYLQRGDVLAGKNCAIKAIPHLDTLEVKGV  177
            YD + LY+Y  + I R +I+P  L  ++L+KYL     +  ++C ++ I  ++++EV+GV
Sbjct  93   YDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEVRGV  152

Query  178  PICIERVKSVSKMLSEQVRHQNQNKETVKVFPLKYASAADSDYQYRDQNVRLPGLVSVLR  237
            P CI  + S+S  L  + + + +NK+ VKVF L+YASA+D  Y+YRDQNV +PG+VS+L+
Sbjct  153  PECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVSILK  212

Query  238  ELNQGNNLPLA--GGNQPDGNQ-ASSPVFSADPRQNAVIIRDRQANMPIYRSLITQLDQR  294
             +    +LP +  G+ +  GN   +S  +SADPR NAV+++DR+  M IY+ LI++LD  
Sbjct  213  TMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISELDIE  272

Query  295  PIQIEISVTIIDVDAGDISQLGVDWSASASIGGTGVSFNSTFAKNNAEGFSTVIGDTGNF  354
              QIEISV+IIDVDA D+ QLGV+WS++ + G   ++FNS+ A+ N    S+VI++++NF
Sbjct  273  QRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNASNF  330

Query  355  MVRLNALQKNSRARILSQPSVVTLNNIQAVLDKNVTFYTKLQGEKVAKLESVTSGSLLRV  414
            M+R+NALQ+NS+A+ILSQPS++TLNN+QA+LDKNVTFYTK+ GEKVA LES+TSG+LLRV
Sbjct  331  MIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTLLRV  390

Query  415  TPRMIETEGV-------QEVLLNLNIQDGQQQA----STNSNEPLPEIRNSDISTQATLQ  463
            TPR+++  +        + V L L+IQDG+Q +    + +++  LPE++NS+++T+ATL 
Sbjct  391  TPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEATLS  450

Query  464  VGQSLLLGGFIQDTQIESQNKipllgdipllgglFRSTDKQSHSVVRLFLIKAVPVNAG  522
             G+SLLLGGFIQD +  S++ IPLL+DIP++G+LF ST KQ HSVVRLFLIKA P++++
Sbjct  451  AGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIKSA  509

25) YPD4_0224 in NC_017154


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  382 bits (1437),  Expect = 2e-107, Method: Compositional matrix adjust.
 Identities = 232/479 (49%), Positives = 354/479 (74%), Gaps = 16/479 (3%)

Query  58   FFIYSRGMTVSELLKDLGMNYGIPVVISSEINEHFTGKIRDKTPEKILSELAGRYNITWY  117
            +FI +++  V  +L+D++ NY+IPV ISS +N++F+G I++  P K+L  L+  Y++TWY
Sbjct  33   YFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWY  92

Query  118  YDGETLYFYPVQSIKREFISPDGLAANTLVKYLQRGDVLAGKNCAIKAIPHLDTLEVKGV  177
            YD + LY+Y  + I R +I+P  L  ++L+KYL     +  ++C ++ I  ++++EV+GV
Sbjct  93   YDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEVRGV  152

Query  178  PICIERVKSVSKMLSEQVRHQNQNKETVKVFPLKYASAADSDYQYRDQNVRLPGLVSVLR  237
            P CI  + S+S  L  + + + +NK+ VKVF L+YASA+D  Y+YRDQNV +PG+VS+L+
Sbjct  153  PECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVSILK  212

Query  238  ELNQGNNLPLA--GGNQPDGNQ-ASSPVFSADPRQNAVIIRDRQANMPIYRSLITQLDQR  294
             +    +LP +  G+ +  GN   +S  +SADPR NAV+++DR+  M IY+ LI++LD  
Sbjct  213  TMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISELDIE  272

Query  295  PIQIEISVTIIDVDAGDISQLGVDWSASASIGGTGVSFNSTFAKNNAEGFSTVIGDTGNF  354
              QIEISV+IIDVDA D+ QLGV+WS++ + G   ++FNS+ A+ N    S+VI++++NF
Sbjct  273  QRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNASNF  330

Query  355  MVRLNALQKNSRARILSQPSVVTLNNIQAVLDKNVTFYTKLQGEKVAKLESVTSGSLLRV  414
            M+R+NALQ+NS+A+ILSQPS++TLNN+QA+LDKNVTFYTK+ GEKVA LES+TSG+LLRV
Sbjct  331  MIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTLLRV  390

Query  415  TPRMIETEGV-------QEVLLNLNIQDGQQQA----STNSNEPLPEIRNSDISTQATLQ  463
            TPR+++  +        + V L L+IQDG+Q +    + +++  LPE++NS+++T+ATL 
Sbjct  391  TPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEATLS  450

Query  464  VGQSLLLGGFIQDTQIESQNKipllgdipllgglFRSTDKQSHSVVRLFLIKAVPVNAG  522
             G+SLLLGGFIQD +  S++ IPLL+DIP++G+LF ST KQ HSVVRLFLIKA P++++
Sbjct  451  AGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIKSA  509

26) YPD8_0229 in NC_017160


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  382 bits (1437),  Expect = 2e-107, Method: Compositional matrix adjust.
 Identities = 232/479 (49%), Positives = 354/479 (74%), Gaps = 16/479 (3%)

Query  58   FFIYSRGMTVSELLKDLGMNYGIPVVISSEINEHFTGKIRDKTPEKILSELAGRYNITWY  117
            +FI +++  V  +L+D++ NY+IPV ISS +N++F+G I++  P K+L  L+  Y++TWY
Sbjct  33   YFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWY  92

Query  118  YDGETLYFYPVQSIKREFISPDGLAANTLVKYLQRGDVLAGKNCAIKAIPHLDTLEVKGV  177
            YD + LY+Y  + I R +I+P  L  ++L+KYL     +  ++C ++ I  ++++EV+GV
Sbjct  93   YDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEVRGV  152

Query  178  PICIERVKSVSKMLSEQVRHQNQNKETVKVFPLKYASAADSDYQYRDQNVRLPGLVSVLR  237
            P CI  + S+S  L  + + + +NK+ VKVF L+YASA+D  Y+YRDQNV +PG+VS+L+
Sbjct  153  PECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVSILK  212

Query  238  ELNQGNNLPLA--GGNQPDGNQ-ASSPVFSADPRQNAVIIRDRQANMPIYRSLITQLDQR  294
             +    +LP +  G+ +  GN   +S  +SADPR NAV+++DR+  M IY+ LI++LD  
Sbjct  213  TMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISELDIE  272

Query  295  PIQIEISVTIIDVDAGDISQLGVDWSASASIGGTGVSFNSTFAKNNAEGFSTVIGDTGNF  354
              QIEISV+IIDVDA D+ QLGV+WS++ + G   ++FNS+ A+ N    S+VI++++NF
Sbjct  273  QRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNASNF  330

Query  355  MVRLNALQKNSRARILSQPSVVTLNNIQAVLDKNVTFYTKLQGEKVAKLESVTSGSLLRV  414
            M+R+NALQ+NS+A+ILSQPS++TLNN+QA+LDKNVTFYTK+ GEKVA LES+TSG+LLRV
Sbjct  331  MIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTLLRV  390

Query  415  TPRMIETEGV-------QEVLLNLNIQDGQQQA----STNSNEPLPEIRNSDISTQATLQ  463
            TPR+++  +        + V L L+IQDG+Q +    + +++  LPE++NS+++T+ATL 
Sbjct  391  TPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEATLS  450

Query  464  VGQSLLLGGFIQDTQIESQNKipllgdipllgglFRSTDKQSHSVVRLFLIKAVPVNAG  522
             G+SLLLGGFIQD +  S++ IPLL+DIP++G+LF ST KQ HSVVRLFLIKA P++++
Sbjct  451  AGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIKSA  509

27) y0514 in NC_004088


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  382 bits (1437),  Expect = 2e-107, Method: Compositional matrix adjust.
 Identities = 232/479 (49%), Positives = 354/479 (74%), Gaps = 16/479 (3%)

Query  58   FFIYSRGMTVSELLKDLGMNYGIPVVISSEINEHFTGKIRDKTPEKILSELAGRYNITWY  117
            +FI +++  V  +L+D++ NY+IPV ISS +N++F+G I++  P K+L  L+  Y++TWY
Sbjct  33   YFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWY  92

Query  118  YDGETLYFYPVQSIKREFISPDGLAANTLVKYLQRGDVLAGKNCAIKAIPHLDTLEVKGV  177
            YD + LY+Y  + I R +I+P  L  ++L+KYL     +  ++C ++ I  ++++EV+GV
Sbjct  93   YDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEVRGV  152

Query  178  PICIERVKSVSKMLSEQVRHQNQNKETVKVFPLKYASAADSDYQYRDQNVRLPGLVSVLR  237
            P CI  + S+S  L  + + + +NK+ VKVF L+YASA+D  Y+YRDQNV +PG+VS+L+
Sbjct  153  PECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVSILK  212

Query  238  ELNQGNNLPLA--GGNQPDGNQ-ASSPVFSADPRQNAVIIRDRQANMPIYRSLITQLDQR  294
             +    +LP +  G+ +  GN   +S  +SADPR NAV+++DR+  M IY+ LI++LD  
Sbjct  213  TMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISELDIE  272

Query  295  PIQIEISVTIIDVDAGDISQLGVDWSASASIGGTGVSFNSTFAKNNAEGFSTVIGDTGNF  354
              QIEISV+IIDVDA D+ QLGV+WS++ + G   ++FNS+ A+ N    S+VI++++NF
Sbjct  273  QRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNASNF  330

Query  355  MVRLNALQKNSRARILSQPSVVTLNNIQAVLDKNVTFYTKLQGEKVAKLESVTSGSLLRV  414
            M+R+NALQ+NS+A+ILSQPS++TLNN+QA+LDKNVTFYTK+ GEKVA LES+TSG+LLRV
Sbjct  331  MIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTLLRV  390

Query  415  TPRMIETEGV-------QEVLLNLNIQDGQQQA----STNSNEPLPEIRNSDISTQATLQ  463
            TPR+++  +        + V L L+IQDG+Q +    + +++  LPE++NS+++T+ATL 
Sbjct  391  TPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEATLS  450

Query  464  VGQSLLLGGFIQDTQIESQNKipllgdipllgglFRSTDKQSHSVVRLFLIKAVPVNAG  522
             G+SLLLGGFIQD +  S++ IPLL+DIP++G+LF ST KQ HSVVRLFLIKA P++++
Sbjct  451  AGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIKSA  509

28) YPZ3_0222 in NC_014029


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  382 bits (1437),  Expect = 2e-107, Method: Compositional matrix adjust.
 Identities = 232/479 (49%), Positives = 354/479 (74%), Gaps = 16/479 (3%)

Query  58   FFIYSRGMTVSELLKDLGMNYGIPVVISSEINEHFTGKIRDKTPEKILSELAGRYNITWY  117
            +FI +++  V  +L+D++ NY+IPV ISS +N++F+G I++  P K+L  L+  Y++TWY
Sbjct  33   YFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWY  92

Query  118  YDGETLYFYPVQSIKREFISPDGLAANTLVKYLQRGDVLAGKNCAIKAIPHLDTLEVKGV  177
            YD + LY+Y  + I R +I+P  L  ++L+KYL     +  ++C ++ I  ++++EV+GV
Sbjct  93   YDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEVRGV  152

Query  178  PICIERVKSVSKMLSEQVRHQNQNKETVKVFPLKYASAADSDYQYRDQNVRLPGLVSVLR  237
            P CI  + S+S  L  + + + +NK+ VKVF L+YASA+D  Y+YRDQNV +PG+VS+L+
Sbjct  153  PECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVSILK  212

Query  238  ELNQGNNLPLA--GGNQPDGNQ-ASSPVFSADPRQNAVIIRDRQANMPIYRSLITQLDQR  294
             +    +LP +  G+ +  GN   +S  +SADPR NAV+++DR+  M IY+ LI++LD  
Sbjct  213  TMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISELDIE  272

Query  295  PIQIEISVTIIDVDAGDISQLGVDWSASASIGGTGVSFNSTFAKNNAEGFSTVIGDTGNF  354
              QIEISV+IIDVDA D+ QLGV+WS++ + G   ++FNS+ A+ N    S+VI++++NF
Sbjct  273  QRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNASNF  330

Query  355  MVRLNALQKNSRARILSQPSVVTLNNIQAVLDKNVTFYTKLQGEKVAKLESVTSGSLLRV  414
            M+R+NALQ+NS+A+ILSQPS++TLNN+QA+LDKNVTFYTK+ GEKVA LES+TSG+LLRV
Sbjct  331  MIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTLLRV  390

Query  415  TPRMIETEGV-------QEVLLNLNIQDGQQQA----STNSNEPLPEIRNSDISTQATLQ  463
            TPR+++  +        + V L L+IQDG+Q +    + +++  LPE++NS+++T+ATL 
Sbjct  391  TPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEATLS  450

Query  464  VGQSLLLGGFIQDTQIESQNKipllgdipllgglFRSTDKQSHSVVRLFLIKAVPVNAG  522
             G+SLLLGGFIQD +  S++ IPLL+DIP++G+LF ST KQ HSVVRLFLIKA P++++
Sbjct  451  AGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIKSA  509

29) YPTB0312 in NC_006155


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  382 bits (1438),  Expect = 2e-107, Method: Compositional matrix adjust.
 Identities = 232/479 (49%), Positives = 354/479 (74%), Gaps = 16/479 (3%)

Query  58   FFIYSRGMTVSELLKDLGMNYGIPVVISSEINEHFTGKIRDKTPEKILSELAGRYNITWY  117
            +FI +++  V  +L+D++ NY+IPV ISS +N++F+G I++  P K+L  L+  Y++TWY
Sbjct  33   YFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWY  92

Query  118  YDGETLYFYPVQSIKREFISPDGLAANTLVKYLQRGDVLAGKNCAIKAIPHLDTLEVKGV  177
            YD + LY+Y  + I R +I+P  L  ++L+KYL     +  ++C ++ I  ++++EV+GV
Sbjct  93   YDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEVRGV  152

Query  178  PICIERVKSVSKMLSEQVRHQNQNKETVKVFPLKYASAADSDYQYRDQNVRLPGLVSVLR  237
            P CI  + S+S  L  + + + +NK+ VKVF L+YASA+D  Y+YRDQNV +PG+VS+L+
Sbjct  153  PECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVSILK  212

Query  238  ELNQGNNLPLA--GGNQPDGNQ-ASSPVFSADPRQNAVIIRDRQANMPIYRSLITQLDQR  294
             +    +LP +  G+ +  GN   +S  +SADPR NAV+++DR+  M IY+ LI++LD  
Sbjct  213  TMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISELDIE  272

Query  295  PIQIEISVTIIDVDAGDISQLGVDWSASASIGGTGVSFNSTFAKNNAEGFSTVIGDTGNF  354
              QIEISV+IIDVDA D+ QLGV+WS++ + G   ++FNS+ A+ N    S+VI++++NF
Sbjct  273  QRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNASNF  330

Query  355  MVRLNALQKNSRARILSQPSVVTLNNIQAVLDKNVTFYTKLQGEKVAKLESVTSGSLLRV  414
            M+R+NALQ+NS+A+ILSQPS++TLNN+QA+LDKNVTFYTK+ GEKVA LES+TSG+LLRV
Sbjct  331  MIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTLLRV  390

Query  415  TPRMIETEGV-------QEVLLNLNIQDGQQQA----STNSNEPLPEIRNSDISTQATLQ  463
            TPR+++  +        + V L L+IQDG+Q +    + +++  LPE++NS+++T+ATL 
Sbjct  391  TPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEATLS  450

Query  464  VGQSLLLGGFIQDTQIESQNKipllgdipllgglFRSTDKQSHSVVRLFLIKAVPVNAG  522
             G+SLLLGGFIQD +  S++ IPLL+DIP++G+LF ST KQ HSVVRLFLIKA P++++
Sbjct  451  AGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIKSA  509

30) escC in NC_005085


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  371 bits (1393),  Expect = 6e-104, Method: Compositional matrix adjust.
 Identities = 215/484 (45%), Positives = 348/484 (72%), Gaps = 22/484 (4%)

Query  25   WQSSAPFFLSTRGSKLADVLRDLGANYSVPVVVSKQVDEPFIGAIRSMPPEQALDQLARL  84
            + + + +F+ T++S +  +L D++ANYS+PV +S  V++ F G I++  P + L++L++L
Sbjct  27   RLGKSEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKL  86

Query  85   HKLAWYYDGQAIYVYKAQEVSSQLITPAYLQVSTLISQLQGSGILDRRYCRVRAVPASNA  144
              L+WYYD + +Y+YK++E+S  +ITP+YL++ +L+  L ++  +++  C VR + + N+
Sbjct  87   YHLTWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNS  146

Query  145  MEVHGVPICLNRVEQLAKRIDEQKLNHEQNQEIIQLFPLKYATAADGSYSYRGQQVAVPG  204
            +EV+GVP C++ +  L+  +D +  +  +N++++++F L+YA+A+D +Y YR+Q+V VPG
Sbjct  147  IEVRGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPG  206

Query  205  VVSVLKDMAQGRTLPLKENQGQQPPTDRSLPMF------SADPRQNAVIVRDRKINMPLY  258
            VVS+LK MA   +LP       + + +RS  +F      SADPR NAV+V+DR I M +Y
Sbjct  207  VVSILKTMASNGSLP----STGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIY  262

Query  259  ASLIEQFDRKPALIEVSVMIIDVNSQDLSALGIDWsasasiggngisfnsagQQGSDNFS  318
              LI ++D     IE+SV IIDV+++DL  LG++WS++ + G   I+FNS+  Q++ + S
Sbjct  263  QQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS-S  321

Query  319  TVISNTGGFMVKLNALQQKAKAQILSRPSVVTLDNTQAVLDRNITFYTKLLAEKVAKLES  378
            +VISN++ FM+++NALQQ++KA+ILS+PS++TL+N QA+LD+N+TFYTK+ +EKVA LES
Sbjct  322  SVISNASNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLES  381

Query  379  ISTGSLLRVTPRLVDEG-----GQR--NVMLTLVIQDGRQAGTVSQHE----PLPQTLNA  427
            I++G+LLRVTPR++D++     G+R   V L L IQDG Q+   S+ +     LP+  N+
Sbjct  382  ITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNS  441

Query  428  EVSTQTLLKAGQSLLLGGFVQDEHSEGESKIPLLGDIPLIGKLFRSTQKNSRSTVRLFLI  487
            E++T++ L AG+SLLLGGF+QD +S +   IPLL+DIP+IG LF ST K+ +S VRLFLI
Sbjct  442  EMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLI  501

Query  488  KAEP  491
            KA P
Sbjct  502  KATP  505

31) Sbal195_2249 in NC_009997


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  370 bits (1390),  Expect = 9e-104, Method: Compositional matrix adjust.
 Identities = 219/495 (45%), Positives = 367/495 (75%), Gaps = 20/495 (4%)

Query  16   AQAAPLTNIKWQGEP-FVMISRGTALTSVIQDFASNYGVPVIVSNKVNDNYIGQIQEQDP  74
            AQAAP +  K+ G + + +I++++++ ++++DFA+NY++PV++S+ VND++ G+I+++ P
Sbjct  17   AQAAPSSLEKRLGKSEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKP  76

Query  75   KSVIQDLTRRYGLVWYYNNEVLYVYKASEINSEVLPLTSLSATKVDHYLRSAGVLDKGVC  134
              V++ L++ Y L WYY++++LY+YK++EI+  ++  T L    +  YL  +  ++K  C
Sbjct  77   VKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSC  136

Query  135  NIKSMAGISGLQVTGVPECINSVTKLTAQLDANAKQTTENQETVKVYPLKYASATDSIYE  194
            N++ ++ +++++V GVPECI+ +T L+  LD +A+  + N++ VKV+ L+YASATD  Y 
Sbjct  137  NVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYK  196

Query  195  YRSQPVSIPGLVTVLKEMDQGTQVANAVAGSVSNISGPVF------AADPRQNAIIVRGS  248
            YR Q V +PG+V++LK M     ++++  G+V   SG +F      +ADPR NA++V++ 
Sbjct  197  YRDQNVVVPGVVSILKTMASNGSLPSTGKGAVER-SGNLFDNSVTISADPRLNAVVVKDR  255

Query  249  ARDMATYGSLIRQLDTKPSMIEVSVSIFDVDASDFKQLGIDWSASAKLgggsvs-fnsgd  307
               M  Y  LI +LD     IE+SVSI+DVDA+D++QLG++WS++ + G G+++  +S  
Sbjct  256  EITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTA  315

Query  308  ssdnfsTVIGNTGNFMMRLNALEKNSKAKVLSRPSVVTLNNVQAVLDKNVTFYTKLEGDK  367
             ++  S+VI+N++NFM+R+NAL++NSKAK+LS+PS++TLNN+QA+LDKNVTFYTK+ G+K
Sbjct  316  QANISSSVISNASNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEK  375

Query  368  VAKLESVTTGSLLRVTPRLIDEVGH-------QAVMLDLNIQDGQQSQAVSRSE----PL  416
            VA LES+T+G+LLRVTPR++D+ ++       + V L L+IQDG+QS   S ++     L
Sbjct  376  VASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTL  435

Query  417  PQVQNSEISTQATLKSGESLLLGGFVQDRDETTQNKIpllgdlpllgglFRSTDHHTQSV  476
            P+VQNSE++T+ATL +GESLLLGGF+QD++ ++++ IPLL+D+P++G+LF ST  + +SV
Sbjct  436  PEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSV  495

Query  477  MRLFLIKAEPVNQGD  491
            +RLFLIKA P++ + 
Sbjct  496  VRLFLIKATPIKSAS  510

32) Sbal678_2258 in NC_016901


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  370 bits (1390),  Expect = 9e-104, Method: Compositional matrix adjust.
 Identities = 219/495 (45%), Positives = 367/495 (75%), Gaps = 20/495 (4%)

Query  16   AQAAPLTNIKWQGEP-FVMISRGTALTSVIQDFASNYGVPVIVSNKVNDNYIGQIQEQDP  74
            AQAAP +  K+ G + + +I++++++ ++++DFA+NY++PV++S+ VND++ G+I+++ P
Sbjct  17   AQAAPSSLEKRLGKSEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKP  76

Query  75   KSVIQDLTRRYGLVWYYNNEVLYVYKASEINSEVLPLTSLSATKVDHYLRSAGVLDKGVC  134
              V++ L++ Y L WYY++++LY+YK++EI+  ++  T L    +  YL  +  ++K  C
Sbjct  77   VKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSC  136

Query  135  NIKSMAGISGLQVTGVPECINSVTKLTAQLDANAKQTTENQETVKVYPLKYASATDSIYE  194
            N++ ++ +++++V GVPECI+ +T L+  LD +A+  + N++ VKV+ L+YASATD  Y 
Sbjct  137  NVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYK  196

Query  195  YRSQPVSIPGLVTVLKEMDQGTQVANAVAGSVSNISGPVF------AADPRQNAIIVRGS  248
            YR Q V +PG+V++LK M     ++++  G+V   SG +F      +ADPR NA++V++ 
Sbjct  197  YRDQNVVVPGVVSILKTMASNGSLPSTGKGAVER-SGNLFDNSVTISADPRLNAVVVKDR  255

Query  249  ARDMATYGSLIRQLDTKPSMIEVSVSIFDVDASDFKQLGIDWSASAKLgggsvs-fnsgd  307
               M  Y  LI +LD     IE+SVSI+DVDA+D++QLG++WS++ + G G+++  +S  
Sbjct  256  EITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTA  315

Query  308  ssdnfsTVIGNTGNFMMRLNALEKNSKAKVLSRPSVVTLNNVQAVLDKNVTFYTKLEGDK  367
             ++  S+VI+N++NFM+R+NAL++NSKAK+LS+PS++TLNN+QA+LDKNVTFYTK+ G+K
Sbjct  316  QANISSSVISNASNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEK  375

Query  368  VAKLESVTTGSLLRVTPRLIDEVGH-------QAVMLDLNIQDGQQSQAVSRSE----PL  416
            VA LES+T+G+LLRVTPR++D+ ++       + V L L+IQDG+QS   S ++     L
Sbjct  376  VASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTL  435

Query  417  PQVQNSEISTQATLKSGESLLLGGFVQDRDETTQNKIpllgdlpllgglFRSTDHHTQSV  476
            P+VQNSE++T+ATL +GESLLLGGF+QD++ ++++ IPLL+D+P++G+LF ST  + +SV
Sbjct  436  PEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSV  495

Query  477  MRLFLIKAEPVNQGD  491
            +RLFLIKA P++ + 
Sbjct  496  VRLFLIKATPIKSAS  510

33) SVI_2260 in NC_014012


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  368 bits (1384),  Expect = 3e-103, Method: Compositional matrix adjust.
 Identities = 210/479 (44%), Positives = 355/479 (75%), Gaps = 19/479 (3%)

Query  31   FVMLSRGTALSSVLQDFANNYGVPISVSNKITDTFIGQIQHQEPKQIIKELSRRYSLVWY  90
            + ++++++++ ++L+DFA NY++P+ +S+ + D F G+I+++ P +++  LS+ Y L WY
Sbjct  33   YFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWY  92

Query  91   YSNEVLFVYKVSEVTNEILSLTSLSAVRASQYIKAAGMLEAGVCKTKPMTGISGLQVSGV  150
            Y +++L++YK +E++  I++ T L      +Y+  +  ++   C+ + +T +++++V GV
Sbjct  93   YDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEVRGV  152

Query  151  PACIKNVTKFTKQLDANAKQVAETKEIVRVYPLKYASATDSVYQYREQSVKIPGLVNVLK  210
            P CIK +T ++  LD +A+  A  K++V+V+ L+YASATD  Y+YR+Q+V +PG+V++LK
Sbjct  153  PECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVSILK  212

Query  211  EMELGNQVANAVSGTVSNVSGPVF------AADSRRNAIIVRGSSQDVTTYASLIKQLDN  264
             M     ++++  G+V   SG +F      +AD+R NA++V++    +  Y  LI +LD 
Sbjct  213  TMASNGSLPSTGKGAVER-SGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISELDI  271

Query  265  KPTMIEISVSILDIDASDFKQLGVDWSASAQLGNGSVSFNSDTSSENI-STVIGNTGNFM  323
                IEISVSI+D+DA+D++QLGV+WS++ + G+G+++FNS T+  NI S+VI+N++NFM
Sbjct  272  EQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANISSSVISNASNFM  331

Query  324  VKLNALEKNSKAKVLSHPSVVTLNNVQAVLDKNVTFYTKLEGDKVAKLESVTTGTLLRVT  383
            +++NAL++NSKAK+LS+PS++TLNN+QA+LDKNVTFYTK+ G+KVA LES+T+GTLLRVT
Sbjct  332  IRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTLLRVT  391

Query  384  PRLIEESGHT-------AVMLNLNIQDGQQSEAVSRSD----PLPQVQNSEISTQAILKS  432
            PR++++S+++        V L L+IQDG+QS   S ++     LP+VQNSE++T+A L +
Sbjct  392  PRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEATLSA  451

Query  433  GESLLIGGFVQDRDETSDHKipllgdipllgglFRSTEHHTQSVMRLFLIKAEPVNQGD  491
            GESLL+GGF+QD++ +S + IPLL+DIP++G+LF ST  + +SV+RLFLIKA P++ + 
Sbjct  452  GESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIKSAS  510

34) ssaC in NC_012751


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  367 bits (1379),  Expect = 7e-103, Method: Compositional matrix adjust.
 Identities = 226/510 (45%), Positives = 368/510 (73%), Gaps = 19/510 (3%)

Query  1    MKKI-----ISLFICFLLSNPFLKAQTIHWQGAPFFIYTHGISLGKLLKEIGLNYGIPVI  55
            MKKI      +LF C   + P   +   +   + +FI T + ++  +L++++ NY+IPV+
Sbjct  1    MKKISFFIFTALFCCSAQAAP--SSLEKRLGKSEYFIITKSSPVRAILNDFAANYSIPVF  58

Query  56   VSPDITDTFSGELKDKTPNQMLDELSTRYNLTWYFDGDVIYFYKIQDIKKQILSSGDLPI  115
            +S+ + D FSGE+K+  P ++L+ LS  Y+LTWY+D +++Y+YK ++I + I+++  L I
Sbjct  59   ISSSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDI  118

Query  116  KALIKYLKNSGLPNGKNCALKALTRLNTVEISGVPVCIERATQLTSLLNTQRQNYNDNKQ  175
             +L+KYL ++   N ++C ++ +T +N++E+ GVP CI   T L+  L+ + Q+   NK+
Sbjct  119  DSLLKYLSDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKD  178

Query  176  AVRVFSLKYASATDTTYQYRDQKVTLPGLVSVLRDMNSQNTIAIGENKTSGKDQSL--GL  233
             V+VF L+YASATD TY+YRDQ+V +PG+VS+L+ M S+ +++   + +  +  +L    
Sbjct  179  VVKVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNS  238

Query  234  PLFSADPRQNALIVRDRVVNMPIYASLVKQLDVRPIEIEISVAIIDVDASDINQLGINWE  293
              +SADPR NA++V+DR + M IY  L+ +LD+   +IEISV+IIDVDA+D++QLG+NW 
Sbjct  239  VTISADPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWS  298

Query  294  ASASLGGGKVSFNKGFISSDDGGFSTVVGNDFMVRINALEQHSKARVLSRPSIVTLNNIQ  353
            ++ + G G ++FN +   ++ ++     +++FM+R+NAL+Q+SKA++LS+PSI+TLNN+Q
Sbjct  299  GTLNAGQGTIAFNSSTAQANISSSVISNASNFMIRVNALQQNSKAKILSQPSIITLNNMQ  358

Query  354  AVLDKNVTFYTKLQGDKVAKLDSRTTGTLMQVTPRMIKD-------KGKEDVLLNLDIQD  406
            A+LDKNVTFYTK+ G+KVA L+S T+GTL++VTPR++ D       K +E V L LDIQD
Sbjct  359  AILDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQD  418

Query  407  GQQ---RPSINNTTEILPQIDNSQITTQAVLKPGQNLLLGGFIQDSQKASKHKipllgdi  463
            G+Q   +++ ++++  LP+++NS++TT+A L +G++LLLGGFIQD + +SK+ IPLL+DI
Sbjct  419  GNQSTNQSNAQDASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDI  478

Query  464  pligglFRssskqsssVVRLFLIKAVPVKN  493
            P+IG+LF S+ KQ  SVVRLFLIKA P+K+
Sbjct  479  PVIGSLFSSTVKQKHSVVRLFLIKATPIKS  508

35) BTI_1921 in NC_021173


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  363 bits (1364),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 213/475 (45%), Positives = 338/475 (72%), Gaps = 16/475 (3%)

Query  40   FFLSTRGMKLSDVLRDLGANYRTPVVVSPKIDGSFIGSVDARTPEAALDRLARLYQLAWY  99
            +F+ T++  +  +L D++ANY  PV +S+ +++ F G +    P   L++L++LY+L+WY
Sbjct  33   YFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWY  92

Query  100  YDGLTLYVYRAQEVSSALITPDYLAPSTLIEQLRAAGLLDSRQCFVQAIPASNAIEARGV  159
            YD   LY+Y+++E+S ++ITP YL   +L+  L  +  ++   C V+ I + N+IE RGV
Sbjct  93   YDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEVRGV  152

Query  160  PICIERVTQFAKRLDEQTIHHAQNQESVKLFPLQYATATDSRYAYRsqqvvvpgvvsvLK  219
            P CI  +T ++  LD ++   A+N++ VK+F L+YA+ATD  Y YR Q+VVVPGVVS+LK
Sbjct  153  PECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVSILK  212

Query  220  DMAQGRALPLKDNQGQQPASDRLLP---MFAADARQNAVIVRDKETNMKLYGDLIAQLDR  276
             MA   +LP    +G    S+ L+     ++AD+R NAV+V+D+E  M +Y +LI++LD 
Sbjct  213  TMASNGSLP-STGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISELDI  271

Query  277  KPKLVEISVAIIDVNAQDLSMLGVDWSASARIGGGSVSFNSGGEPDSGSFSTVVSNTGQF  336
              + +EISV+IIDV+A+DL  LGV+WS++   G G+++FNS+    + S S+V+SN+++F
Sbjct  272  EQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS-SSVISNASNF  330

Query  337  MVRLSALEQNAKAQILSRPSVVTLDNMQAVLDRNITFYTKVSAERVAKLESISTGSLLRV  396
            M+R++AL+QN+KA+ILS+PS++TL+NMQA+LD+N+TFYTKVS+E+VA LESI++G+LLRV
Sbjct  331  MIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTLLRV  390

Query  397  TPRVIGDPG-------KQEIMLTLMVQDGRQTGALSKQE----PLPQTLNSEIATHALLK  445
            TPR+++D++       ++ + L L +QDG Q+   S+ +     LP+  NSE++T+A L 
Sbjct  391  TPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEATLS  450

Query  446  EGQALLLGGFVQDELSEGERKIPLLGDIPLLGNLFKMRQKNQRHTVRLFLIKAEP  500
             G++LLLGGF+QD  S +   IPLL+DIP++G+LF    K+++  VRLFLIKA P
Sbjct  451  AGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATP  505

36) SARI_01587 in NC_010067


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  357 bits (1341),  Expect = 8e-100, Method: Compositional matrix adjust.
 Identities = 216/486 (45%), Positives = 350/486 (73%), Gaps = 21/486 (4%)

Query  15   NDFTLYARQMPLTEVLHLLSENYDtaitispsitatFSGKISPGPPVDILNNLAAQYDLL  74
            +++ + ++  P+  +L+ ++ NY  ++ IS+S+   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  75   TWF-DGNMLYVYPASLLKHQVINFNILSTGRFIHYLRSQNILSSPGCEVKEITGTSAVEV  133
            TW+ D N+LY+Y ++ + + +I    L  + ++ YL     ++  +C+V+ IT  +++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  134  SGVPSCLTRISQLASVLD-NALIKQKDSAVSVSIYTLKYATAMDTQYQYRDQAVVVPGVV  192
             GVP C+  I+ L+  LD +A  K K+  V V ++ L+YA+A D  Y+YRDQ VVVPGVV
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDV-VKVFKLNYASATDITYKYRDQNVVVPGVV  208

Query  193  SVLREMSKSSVPASSTNNGSPATQEL----PMFAADPRQNAVIVRDYSVNMAGYRKLITE  248
            S+L+ M+ ++  +S+ + +   + +L      ++ADPR NAV+V+D  + M  Y++LI+E
Sbjct  209  SILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISE  268

Query  249  LDQHQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNSGPNEGDTNGFSTVISD  308
            LD +Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFNS+  +++ +  S+VIS+
Sbjct  269  LDIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISN  326

Query  309  TSNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGS  368
            +SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+
Sbjct  327  ASNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGT  386

Query  369  LLRVTPRLLNDNGT-------QKIMLNLNIQDG----QQSDTQSETNPLPEVQNSEIASQ  417
            LLRVTPR+L+D++        +++ L L+IQDG    +QS++Q  ++ LPEVQNSE++++
Sbjct  387  LLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTE  446

Query  418  ATLLAGQSLLLGGFKQGKQIRSQNKIPLLGDIPVLGHLFRNDTTQVHSVIRLFLIKASVV  477
            ATL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ +
Sbjct  447  ATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPI  506

Query  478  NNGISH  483
            +++ S+
Sbjct  507  KSASSE  512

37) Sbal117_2061 in NC_017579


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  353 bits (1327),  Expect = 9e-99, Method: Compositional matrix adjust.
 Identities = 217/495 (44%), Positives = 368/495 (75%), Gaps = 20/495 (4%)

Query  16   AQAAPLTNIKWQGEP-FVMISRGTALTSVIQDFASNYGVPVIVSNKVNDNYigqiqqqdp  74
            AQAAP +  K+ G + + +I++++++ ++++DFA+NY++PV++S+ VND++ G+I+++ P
Sbjct  17   AQAAPSSLEKRLGKSEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKP  76

Query  75   qsviqDLTRRFGLVWYYNNDVLYVYKASEINSEVLPLTSLSAAKVDHYLRSAGVLDKGVC  134
              V++ L++ + L WYY++++LY+YK++EI+  ++  T L    +  YL  +  ++K  C
Sbjct  77   VKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSC  136

Query  135  SIKSMAGISGLQVTGVPECINSVTKLTAQLDANAKQTTENQETVKVYPLKYASATDSVYQ  194
            +++ ++ +++++V GVPECI+ +T L+  LD +A+  + N++ VKV+ L+YASATD  Y+
Sbjct  137  NVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYK  196

Query  195  YRSQPVSIPGLVTVLKEMDQGTQVANAVAGSVSNISGPVF------AADPRQNAIIVRGS  248
            YR Q V +PG+V++LK M     ++++  G+V   SG +F      +ADPR NA++V++ 
Sbjct  197  YRDQNVVVPGVVSILKTMASNGSLPSTGKGAVER-SGNLFDNSVTISADPRLNAVVVKDR  255

Query  249  ARDMATYGSLIRQLDTKPTMIEVSVSIFDVDASDFKQLGIDWSASAKLgggsvs-fnsgd  307
               M  Y  LI +LD     IE+SVSI+DVDA+D++QLG++WS++ + G G+++  +S  
Sbjct  256  EITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTA  315

Query  308  ssdnfsTVIGNTGNFMLRLNALEKNSKAKVLSRPSVVTLNNVQAVLDKNVTFYTKLEGDK  367
             ++  S+VI+N++NFM+R+NAL++NSKAK+LS+PS++TLNN+QA+LDKNVTFYTK+ G+K
Sbjct  316  QANISSSVISNASNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEK  375

Query  368  VAKLESVTTGSLLRVTPRLIDEVGH-------QAVMLDLNIQDGQQSQAVSRSE----PL  416
            VA LES+T+G+LLRVTPR++D+ ++       + V L L+IQDG+QS   S ++     L
Sbjct  376  VASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTL  435

Query  417  PQVQNSEISTQATLKSGESLLLGGFVQDRDETTQNKIpllgdlpllgglFRSTDHHTQSV  476
            P+VQNSE++T+ATL +GESLLLGGF+QD++ ++++ IPLL+D+P++G+LF ST  + +SV
Sbjct  436  PEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSV  495

Query  477  MRLFLIKAEPVNQGD  491
            +RLFLIKA P++ + 
Sbjct  496  VRLFLIKATPIKSAS  510

38) Sbal_1946 in NC_009052


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  353 bits (1327),  Expect = 9e-99, Method: Compositional matrix adjust.
 Identities = 217/495 (44%), Positives = 368/495 (75%), Gaps = 20/495 (4%)

Query  16   AQAAPLTNIKWQGEP-FVMISRGTALTSVIQDFASNYGVPVIVSNKVNDNYigqiqqqdp  74
            AQAAP +  K+ G + + +I++++++ ++++DFA+NY++PV++S+ VND++ G+I+++ P
Sbjct  17   AQAAPSSLEKRLGKSEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKP  76

Query  75   qsviqDLTRRFGLVWYYNNDVLYVYKASEINSEVLPLTSLSAAKVDHYLRSAGVLDKGVC  134
              V++ L++ + L WYY++++LY+YK++EI+  ++  T L    +  YL  +  ++K  C
Sbjct  77   VKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSC  136

Query  135  SIKSMAGISGLQVTGVPECINSVTKLTAQLDANAKQTTENQETVKVYPLKYASATDSVYQ  194
            +++ ++ +++++V GVPECI+ +T L+  LD +A+  + N++ VKV+ L+YASATD  Y+
Sbjct  137  NVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYK  196

Query  195  YRSQPVSIPGLVTVLKEMDQGTQVANAVAGSVSNISGPVF------AADPRQNAIIVRGS  248
            YR Q V +PG+V++LK M     ++++  G+V   SG +F      +ADPR NA++V++ 
Sbjct  197  YRDQNVVVPGVVSILKTMASNGSLPSTGKGAVER-SGNLFDNSVTISADPRLNAVVVKDR  255

Query  249  ARDMATYGSLIRQLDTKPTMIEVSVSIFDVDASDFKQLGIDWSASAKLgggsvs-fnsgd  307
               M  Y  LI +LD     IE+SVSI+DVDA+D++QLG++WS++ + G G+++  +S  
Sbjct  256  EITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTA  315

Query  308  ssdnfsTVIGNTGNFMLRLNALEKNSKAKVLSRPSVVTLNNVQAVLDKNVTFYTKLEGDK  367
             ++  S+VI+N++NFM+R+NAL++NSKAK+LS+PS++TLNN+QA+LDKNVTFYTK+ G+K
Sbjct  316  QANISSSVISNASNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEK  375

Query  368  VAKLESVTTGSLLRVTPRLIDEVGH-------QAVMLDLNIQDGQQSQAVSRSE----PL  416
            VA LES+T+G+LLRVTPR++D+ ++       + V L L+IQDG+QS   S ++     L
Sbjct  376  VASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTL  435

Query  417  PQVQNSEISTQATLKSGESLLLGGFVQDRDETTQNKIpllgdlpllgglFRSTDHHTQSV  476
            P+VQNSE++T+ATL +GESLLLGGF+QD++ ++++ IPLL+D+P++G+LF ST  + +SV
Sbjct  436  PEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSV  495

Query  477  MRLFLIKAEPVNQGD  491
            +RLFLIKA P++ + 
Sbjct  496  VRLFLIKATPIKSAS  510

39) ETAC_04145 in NC_020796


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  351 bits (1319),  Expect = 4e-98, Method: Compositional matrix adjust.
 Identities = 209/495 (43%), Positives = 365/495 (74%), Gaps = 18/495 (3%)

Query  11   CGGFSAPS-LAQPIPWRGAPFFVSSQSATLASVLRDLGANSGVPVVVSPRITESYAGELR  69
            C++ +APS L + +    + +F+ ++S+ + ++L D++AN ++PV +S+ + + ++GE++
Sbjct  15   CSAQAAPSSLEKRLG--KSEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIK  72

Query  70   DTPRGTILAELSRLYQLLPYYDGNTLYIYKAQEMEQATLAPSYLAGSVLKRLLQRSGLLD  129
            +     +L  LS+LY+L  YYD N LYIYK++E+ ++ ++P+YL    L + L  +  ++
Sbjct  73   NEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVN  132

Query  130  GYACQVRQVASANALQVNGVPACLSQVTTLAKQLDEQDLNLEQNRETVAVFPLKYANASD  189
              +C+VR++++ N+++V GVP C+  +T+L+  LD +  +  +N++ V VF L+YA+A+D
Sbjct  133  KNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATD  192

Query  190  TSYAYRNQSVVVPGLVSVLREMAQGHAMPLPDSKSGTPPSNS--SGLPTFSADLRQNAVL  247
             +Y YR+Q+VVVPG+VS+L+ MA   ++P + +K++   S +      T+SAD R NAV+
Sbjct  193  ITYKYRDQNVVVPGVVSILKTMASNGSLP-STGKGAVERSGNLFDNSVTISADPRLNAVV  251

Query  248  IRDRKQNMALYRQLIQQLDKRPTLIEISVTIIDVDAGDINELGIDWSASARIGGGQVSFN  307
            ++DR   M +Y+QLI +LD     IEISV+IIDVDA D+++LG++WS++   G G ++FN
Sbjct  252  VKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFN  311

Query  308  NSGGLNADSFSSLIANSGSFMVRLSALEQQSKAKIVSRPSVVTLDNVQAVLDRSITFYTK  367
            +S + +A+  SS+I+N+++FM+R++AL+Q+SKAKI+S+PS++TL+N+QA+LD+++TFYTK
Sbjct  312  SSTA-QANISSSVISNASNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTK  370

Query  368  LRSEKNPKLEAITAGALMRVTPRLIRERGG-------NKILLILNIEDGRQGAPLSQAE-  419
            + +EK + LE+IT+G+L+RVTPR++ + +        +++ L+L+I+DG Q++  S+A+ 
Sbjct  371  VSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQD  430

Query  420  ---SLPQVQNAEIATQATLNLGQALLLGGFVQNENTQGVRKipllgdipligglFRSTDS  476
               +LP+VQN+E++T+ATL+ G++LLLGGF+Q+ ++ +   IPLL+DIP+IG+LF ST  
Sbjct  431  ASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVK  490

Query  477  KVHSVVRLFLIKAEP  491
            + HSVVRLFLIKA P
Sbjct  491  QKHSVVRLFLIKATP  505

40) esaC in NC_013508


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  351 bits (1319),  Expect = 4e-98, Method: Compositional matrix adjust.
 Identities = 209/495 (43%), Positives = 365/495 (74%), Gaps = 18/495 (3%)

Query  11   CGGFSAPS-LAQPIPWRGAPFFVSSQSATLASVLRDLGANSGVPVVVSPRITESYAGELR  69
            C++ +APS L + +    + +F+ ++S+ + ++L D++AN ++PV +S+ + + ++GE++
Sbjct  15   CSAQAAPSSLEKRLG--KSEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIK  72

Query  70   DTPRGTILAELSRLYQLLPYYDGNTLYIYKAQEMEQATLAPSYLAGSVLKRLLQRSGLLD  129
            +     +L  LS+LY+L  YYD N LYIYK++E+ ++ ++P+YL    L + L  +  ++
Sbjct  73   NEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVN  132

Query  130  GYACQVRQVASANALQVNGVPACLSQVTTLAKQLDEQDLNLEQNRETVAVFPLKYANASD  189
              +C+VR++++ N+++V GVP C+  +T+L+  LD +  +  +N++ V VF L+YA+A+D
Sbjct  133  KNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATD  192

Query  190  TSYAYRNQSVVVPGLVSVLREMAQGHAMPLPDSKSGTPPSNS--SGLPTFSADLRQNAVL  247
             +Y YR+Q+VVVPG+VS+L+ MA   ++P + +K++   S +      T+SAD R NAV+
Sbjct  193  ITYKYRDQNVVVPGVVSILKTMASNGSLP-STGKGAVERSGNLFDNSVTISADPRLNAVV  251

Query  248  IRDRKQNMALYRQLIQQLDKRPTLIEISVTIIDVDAGDINELGIDWSASARIGGGQVSFN  307
            ++DR   M +Y+QLI +LD     IEISV+IIDVDA D+++LG++WS++   G G ++FN
Sbjct  252  VKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFN  311

Query  308  NSGGLNADSFSSLIANSGSFMVRLSALEQQSKAKIVSRPSVVTLDNVQAVLDRSITFYTK  367
            +S + +A+  SS+I+N+++FM+R++AL+Q+SKAKI+S+PS++TL+N+QA+LD+++TFYTK
Sbjct  312  SSTA-QANISSSVISNASNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTK  370

Query  368  LRSEKNPKLEAITAGALMRVTPRLIRERGG-------NKILLILNIEDGRQGAPLSQAE-  419
            + +EK + LE+IT+G+L+RVTPR++ + +        +++ L+L+I+DG Q++  S+A+ 
Sbjct  371  VSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQD  430

Query  420  ---SLPQVQNAEIATQATLNLGQALLLGGFVQNENTQGVRKipllgdipligglFRSTDS  476
               +LP+VQN+E++T+ATL+ G++LLLGGF+Q+ ++ +   IPLL+DIP+IG+LF ST  
Sbjct  431  ASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVK  490

Query  477  KVHSVVRLFLIKAEP  491
            + HSVVRLFLIKA P
Sbjct  491  QKHSVVRLFLIKATP  505

41) esaC in NC_017309


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  351 bits (1319),  Expect = 4e-98, Method: Compositional matrix adjust.
 Identities = 209/495 (43%), Positives = 365/495 (74%), Gaps = 18/495 (3%)

Query  11   CGGFSAPS-LAQPIPWRGAPFFVSSQSATLASVLRDLGANSGVPVVVSPRITESYAGELR  69
            C++ +APS L + +    + +F+ ++S+ + ++L D++AN ++PV +S+ + + ++GE++
Sbjct  15   CSAQAAPSSLEKRLG--KSEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIK  72

Query  70   DTPRGTILAELSRLYQLLPYYDGNTLYIYKAQEMEQATLAPSYLAGSVLKRLLQRSGLLD  129
            +     +L  LS+LY+L  YYD N LYIYK++E+ ++ ++P+YL    L + L  +  ++
Sbjct  73   NEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVN  132

Query  130  GYACQVRQVASANALQVNGVPACLSQVTTLAKQLDEQDLNLEQNRETVAVFPLKYANASD  189
              +C+VR++++ N+++V GVP C+  +T+L+  LD +  +  +N++ V VF L+YA+A+D
Sbjct  133  KNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATD  192

Query  190  TSYAYRNQSVVVPGLVSVLREMAQGHAMPLPDSKSGTPPSNS--SGLPTFSADLRQNAVL  247
             +Y YR+Q+VVVPG+VS+L+ MA   ++P + +K++   S +      T+SAD R NAV+
Sbjct  193  ITYKYRDQNVVVPGVVSILKTMASNGSLP-STGKGAVERSGNLFDNSVTISADPRLNAVV  251

Query  248  IRDRKQNMALYRQLIQQLDKRPTLIEISVTIIDVDAGDINELGIDWSASARIGGGQVSFN  307
            ++DR   M +Y+QLI +LD     IEISV+IIDVDA D+++LG++WS++   G G ++FN
Sbjct  252  VKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFN  311

Query  308  NSGGLNADSFSSLIANSGSFMVRLSALEQQSKAKIVSRPSVVTLDNVQAVLDRSITFYTK  367
            +S + +A+  SS+I+N+++FM+R++AL+Q+SKAKI+S+PS++TL+N+QA+LD+++TFYTK
Sbjct  312  SSTA-QANISSSVISNASNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTK  370

Query  368  LRSEKNPKLEAITAGALMRVTPRLIRERGG-------NKILLILNIEDGRQGAPLSQAE-  419
            + +EK + LE+IT+G+L+RVTPR++ + +        +++ L+L+I+DG Q++  S+A+ 
Sbjct  371  VSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQD  430

Query  420  ---SLPQVQNAEIATQATLNLGQALLLGGFVQNENTQGVRKipllgdipligglFRSTDS  476
               +LP+VQN+E++T+ATL+ G++LLLGGF+Q+ ++ +   IPLL+DIP+IG+LF ST  
Sbjct  431  ASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVK  490

Query  477  KVHSVVRLFLIKAEP  491
            + HSVVRLFLIKA P
Sbjct  491  QKHSVVRLFLIKATP  505

42) Sbal175_2420 in NC_017571


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  343 bits (1289),  Expect = 1e-95, Method: Compositional matrix adjust.
 Identities = 215/495 (44%), Positives = 367/495 (75%), Gaps = 20/495 (4%)

Query  16   AQAAPLTNIKWQGEP-FVMISRGTALTSVIQDFASNYGVPVIVSNKinynyigqiqqqdp  74
            AQAAP +  K+ G + + +I++++++ ++++DFA+NY++PV++S+ +N ++ G+I+++ P
Sbjct  17   AQAAPSSLEKRLGKSEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKP  76

Query  75   qsviqDLTRRFGLVWYYNNDVLYVYKASEINSEVLPLTSLSAAKVDHYLRSAGVLDKGVC  134
              V++ L++ + L WYY++++LY+YK++EI+  ++  T L    +  YL  +  ++K  C
Sbjct  77   VKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSC  136

Query  135  SIKSMAGISGLQVIGVPECINSVTKLTAQLDANAKQTTENQETVKVYPLKYASATDSVYQ  194
            +++ ++ +++++V GVPECI+ +T L+  LD +A+  + N++ VKV+ L+YASATD  Y+
Sbjct  137  NVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYK  196

Query  195  YRSQPVSIPGLVTVLKEMDQGTQVANAVAGSVSNISGPVF------AADPRQNAIIVRGS  248
            YR Q V +PG+V++LK M     ++++  G+V   SG +F      +ADPR NA++V++ 
Sbjct  197  YRDQNVVVPGVVSILKTMASNGSLPSTGKGAVER-SGNLFDNSVTISADPRLNAVVVKDR  255

Query  249  ARDMATYGSLIRQLDTKPTMIEVSVSIFDVDASDFKQLGIDWSASAKLgggsvs-fnsgd  307
               M  Y  LI +LD     IE+SVSI+DVDA+D++QLG++WS++ + G G+++  +S  
Sbjct  256  EITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTA  315

Query  308  ssdnfsTVIGNTGNFMLRLNALEKNSKAKVLSRPSVVTLNNVQAVLDKNVTFYTKLEGDK  367
             ++  S+VI+N++NFM+R+NAL++NSKAK+LS+PS++TLNN+QA+LDKNVTFYTK+ G+K
Sbjct  316  QANISSSVISNASNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEK  375

Query  368  VAKLESVTTGSLLRVTPRLIDEVGH-------QAVMLDLNIQDGQQSQAVSRSE----PL  416
            VA LES+T+G+LLRVTPR++D+ ++       + V L L+IQDG+QS   S ++     L
Sbjct  376  VASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTL  435

Query  417  PQVQNSEISTQATLKSGESLLLGGFVQDRDETTQNKIpllgdlpllgglFRSTDHHTQSV  476
            P+VQNSE++T+ATL +GESLLLGGF+QD++ ++++ IPLL+D+P++G+LF ST  + +SV
Sbjct  436  PEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSV  495

Query  477  MRLFLIKAEPVNQGD  491
            +RLFLIKA P++ + 
Sbjct  496  VRLFLIKATPIKSAS  510

43) NT01EI_0943 in NC_012779


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  342 bits (1284),  Expect = 2e-95, Method: Compositional matrix adjust.
 Identities = 207/503 (42%), Positives = 365/503 (73%), Gaps = 13/503 (2%)

Query  1    MRIIVLLILLCCEFSAVSLAQPIPWRGAPFFVSSQSVTLASVLRDLGANSGVPVVVSPHI  60
            + ++++  L+CC   A + +       + +F+ ++S  + ++L D++AN ++PV +S+ +
Sbjct  4    ISFFIFTALFCCSAQAAPSSLEKRLGKSEYFIITKSSPVRAILNDFAANYSIPVFISSSV  63

Query  61   TESYVGELRDSPPGTILAELSRLYQLLPYYDGNTLYVYKAQEVEQTTLAPSYLAGSVLKR  120
             + + GE+++  P  +L  LS+LY+L  YYD N LY+YK++E+ ++ ++P+YL    L +
Sbjct  64   NDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDSLLK  123

Query  121  LLQRSGLLDGYACQVRQVAAANALQVNGVPACLSQVTTLAKQLDEQDLNQEQNRETVEVF  180
             L  +  ++  +C+VR++++ N+++V GVP C+  +T+L+  LD +  ++ +N++ V VF
Sbjct  124  YLSDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQSKAKNKDVVKVF  183

Query  181  PLKYANASDTSYTYRNQSVVVPGLVSVLREMAQGHAMPLpdsksstppsns-sglpTFSA  239
             L+YA+A+D +Y YR+Q+VVVPG+VS+L+ MA   ++P  +  +   ++N      T+SA
Sbjct  184  KLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNSVTISA  243

Query  240  DLRQNAVLIRDRKQNMALYRQLIQRLDKRPTLIEISVTIIDVDAGDINQLGIDWSASARI  299
            D R NAV+++DR   M +Y+QLI  LD     IEISV+IIDVDA D++QLG++WS++   
Sbjct  244  DPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNA  303

Query  300  GGGQVSFNNGGRLNsdsfsslisnsgsFMVRLSALEQQSKAKIVSRPSVVTLDNVQAVLD  359
            G G ++FN++   +++  SS+ISN+++FM+R++AL+Q+SKAKI+S+PS++TL+N+QA+LD
Sbjct  304  GQGTIAFNSSTA-QANISSSVISNASNFMIRVNALQQNSKAKILSQPSIITLNNMQAILD  362

Query  360  RSITFYTKLSSEKNPKLEAITSGALMRVTPRLIRENGG-------NKVLLILNIEDGRQG  412
            +++TFYTK+S+EK + LE+ITSG+L+RVTPR++ +++        ++V L+L+I+DG Q+
Sbjct  363  KNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQS  422

Query  413  APLSQTE----SLPQVQNAEIATQATLNLGQALLLGGFVQNENTQGVRKipllgdlplig  468
            +  S+++    +LP+VQN+E++T+ATL+ G++LLLGGF+Q+ ++ +   IPLL+D+P+IG
Sbjct  423  TNQSNAQDASSTLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIG  482

Query  469  glFRSTDRNTLSVVRLFLIKAEP  491
            +LF ST ++  SVVRLFLIKA P
Sbjct  483  SLFSSTVKQKHSVVRLFLIKATP  505

44) SEEB0189_12565 in NC_021844


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  342 bits (1283),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 343/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTKAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT  +++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPASSTNNGSPATQAL----PMFAADPRQNAVIVRDYAANMAGYRKLITEL  262
            +L+ M+  +  +S+ + +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

45) SBOV13921 in NC_022241


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  342 bits (1283),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 343/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTKAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT  +++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPASSTNNGSPATQAL----PMFAADPRQNAVIVRDYAANMAGYRKLITEL  262
            +L+ M+  +  +S+ + +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

46) SeD_A1948 in NC_011205


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  342 bits (1283),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 343/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTKAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT  +++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPASSTNNGSPATQAL----PMFAADPRQNAVIVRDYAANMAGYRKLITEL  262
            +L+ M+  +  +S+ + +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

47) SNSL254_A1506 in NC_011080


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  342 bits (1283),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 343/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTKAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT  +++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPASSTNNGSPATQAL----PMFAADPRQNAVIVRDYAANMAGYRKLITEL  262
            +L+ M+  +  +S+ + +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

48) SN31241_24650 in NC_021902


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  342 bits (1283),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 343/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTKAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT  +++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPASSTNNGSPATQAL----PMFAADPRQNAVIVRDYAANMAGYRKLITEL  262
            +L+ M+  +  +S+ + +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

49) SSPA1357 in NC_011147


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  342 bits (1283),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 342/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTKAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT  +++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPASSTTNGSPATQAL----PMFAADPRQNAVIVRDYAANMAGYRKLITEL  262
            +L+ M+  +  +S+   +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

50) spiA in NC_006511


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  342 bits (1283),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 342/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTKAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT  +++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPASSTTNGSPATQAL----PMFAADPRQNAVIVRDYAANMAGYRKLITEL  262
            +L+ M+  +  +S+   +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

51) SPAB_01932 in NC_010102


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  342 bits (1283),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 214/487 (44%), Positives = 346/487 (72%), Gaps = 23/487 (4%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTKAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT  +++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPVSSTNNGSPATQALPMF------AADPRQNAVIVRDYAANMAGYRKLIT  260
            +L+ M+  + +++ST +G+    +  +F      +ADPR NAV+V+D    M  Y++LI+
Sbjct  210  ILKTMASNG-SLPSTGKGAVERSG-NLFDNSVTISADPRLNAVVVKDREITMDIYQQLIS  267

Query  261  ELDQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVIS  320
            ELD  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS
Sbjct  268  ELDIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVIS  325

Query  321  DTSNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTG  380
            ++SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G
Sbjct  326  NASNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSG  385

Query  381  SLLRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIAS  429
            +LLRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE+++
Sbjct  386  TLLRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTT  445

Query  430  QATLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASV  489
            +ATL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ 
Sbjct  446  EATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATP  505

Query  490  VNNGISH  496
            ++++ S+
Sbjct  506  IKSASSE  512

52) SE451236_12835 in NC_021820


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  341 bits (1282),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 342/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTKAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT  +++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPTSSTNNGSPATQAL----PMFAADPRQNAVIVRDYAANMAGYRKLITEL  262
            +L+ M+  +   S+ + +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

53) SeAg_B1778 in NC_011149


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  341 bits (1282),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 342/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTRAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT   ++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPASSTNNGSPATQAL----PMFAADPRQNAVIVRDYAANMAGYRKLITEL  262
            +L+ M+  +  +S+ + +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

54) ssaC in NC_022221


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  341 bits (1282),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 343/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTKAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT  +++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPASSTNNGSPATQAL----PMFAADPRQNAVIVRDYASNMAGYRKLITEL  262
            +L+ M+  +  +S+ + +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

55) ssaC in NC_016831


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  341 bits (1282),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 343/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTKAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT  +++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPASSTNNGSPATQAL----PMFAADPRQNAVIVRDYASNMAGYRKLITEL  262
            +L+ M+  +  +S+ + +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

56) I137_05575 in NC_021984


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  341 bits (1282),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 343/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTKAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT  +++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPASSTNNGSPATQAL----PMFAADPRQNAVIVRDYASNMAGYRKLITEL  262
            +L+ M+  +  +S+ + +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

57) ssaC in NC_016856


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  341 bits (1282),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 342/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTKAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT  +++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPTSSTNNGSPATQAL----PMFAADPRQNAVIVRDYAANMAGYRKLITEL  262
            +L+ M+  +   S+ + +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

58) spiA in NC_017046


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  341 bits (1282),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 342/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTKAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT  +++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPTSSTNNGSPATQAL----PMFAADPRQNAVIVRDYAANMAGYRKLITEL  262
            +L+ M+  +   S+ + +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

59) STMMW_13991 in NC_016854


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  341 bits (1282),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 342/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTKAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT  +++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPTSSTNNGSPATQAL----PMFAADPRQNAVIVRDYAANMAGYRKLITEL  262
            +L+ M+  +   S+ + +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

60) ssaC in NC_003197


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  341 bits (1282),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 342/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTKAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT  +++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPTSSTNNGSPATQAL----PMFAADPRQNAVIVRDYAANMAGYRKLITEL  262
            +L+ M+  +   S+ + +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

61) spiA in NC_016810


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  341 bits (1282),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 342/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTKAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT  +++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPTSSTNNGSPATQAL----PMFAADPRQNAVIVRDYAANMAGYRKLITEL  262
            +L+ M+  +   S+ + +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

62) ssaC in NC_016857


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  341 bits (1282),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 342/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTKAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT  +++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPTSSTNNGSPATQAL----PMFAADPRQNAVIVRDYAANMAGYRKLITEL  262
            +L+ M+  +   S+ + +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

63) STMDT12_C14100 in NC_016860


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  341 bits (1282),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 342/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTKAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT  +++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPTSSTNNGSPATQAL----PMFAADPRQNAVIVRDYAANMAGYRKLITEL  262
            +L+ M+  +   S+ + +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

64) STU288_03290 in NC_021151


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  341 bits (1282),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 342/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTKAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT  +++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPTSSTNNGSPATQAL----PMFAADPRQNAVIVRDYAANMAGYRKLITEL  262
            +L+ M+  +   S+ + +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

65) ssaC in NC_016863


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  341 bits (1282),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 342/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTKAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT  +++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPTSSTNNGSPATQAL----PMFAADPRQNAVIVRDYAANMAGYRKLITEL  262
            +L+ M+  +   S+ + +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

66) CFSAN001921_10175 in NC_021814


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  341 bits (1282),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 342/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTKAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT  +++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPTSSTNNGSPATQAL----PMFAADPRQNAVIVRDYAANMAGYRKLITEL  262
            +L+ M+  +   S+ + +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

67) ssaC in NC_006905


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  341 bits (1281),  Expect = 4e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 341/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTRAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT   ++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPASSTTNGSPATQAL----PMFAADPRQNAVIVRDYAANMAGYRKLITEL  262
            +L+ M+  +  +S+   +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

68) CFSAN002050_13365 in NC_021818


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  341 bits (1281),  Expect = 4e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 341/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTRAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT   ++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPASSTTNGSPATQAL----PMFAADPRQNAVIVRDYAANMAGYRKLITEL  262
            +L+ M+  +  +S+   +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

69) ssaC in NC_011294


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  341 bits (1281),  Expect = 4e-95, Method: Compositional matrix adjust.
 Identities = 213/485 (44%), Positives = 345/485 (72%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTKAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT  +++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREM-SKTSVPASSMNNGSPATQALP---MFAADPRQNAVIVRDYAANMAGYRKLITEL  262
            +L+ M S+ S+P+++      + + +     ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

70) SEEH1578_16205 in NC_021810


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  341 bits (1281),  Expect = 4e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 341/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTRAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT   ++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPASSTTNGSPATQAL----PMFAADPRQNAVIVRDYAANMAGYRKLITEL  262
            +L+ M+  +  +S+   +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

71) SU5_02011 in NC_017623


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  341 bits (1281),  Expect = 4e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 341/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTRAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT   ++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPASSTTNGSPATQAL----PMFAADPRQNAVIVRDYAANMAGYRKLITEL  262
            +L+ M+  +  +S+   +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

72) CFSAN002069_02030 in NC_021812


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  341 bits (1281),  Expect = 4e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 341/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTRAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT   ++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPASSTTNGSPATQAL----PMFAADPRQNAVIVRDYAANMAGYRKLITEL  262
            +L+ M+  +  +S+   +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

73) SeHA_C1528 in NC_011083


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  341 bits (1281),  Expect = 4e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 341/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTRAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT   ++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPASSTTNGSPATQAL----PMFAADPRQNAVIVRDYAANMAGYRKLITEL  262
            +L+ M+  +  +S+   +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

74) CFSAN001992_04620 in NC_020307


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  341 bits (1282),  Expect = 4e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 342/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTRAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT   ++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPASSTNNGSPATQAL----PMFAADPRQNAVIVRDYAANMAGYRKLITEL  262
            +L+ M+  +  +S+ + +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

75) spiA in NC_012125


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  341 bits (1281),  Expect = 4e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 341/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTRAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT   ++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPASSTTNGSPATQAL----PMFAADPRQNAVIVRDYAANMAGYRKLITEL  262
            +L+ M+  +  +S+   +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

76) SeSA_A1491 in NC_011094


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  341 bits (1282),  Expect = 4e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 342/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTRAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT   ++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPASSTNNGSPATQAL----PMFAADPRQNAVIVRDYAANMAGYRKLITEL  262
            +L+ M+  +  +S+ + +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

77) spiA in NC_003198


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  341 bits (1281),  Expect = 4e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 341/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTRAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT   ++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPASSTTNGSPATQAL----PMFAADPRQNAVIVRDYAANMAGYRKLITEL  262
            +L+ M+  +  +S+   +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

78) STBHUCCB_13530 in NC_016832


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  341 bits (1281),  Expect = 4e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 341/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTRAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT   ++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPASSTTNGSPATQAL----PMFAADPRQNAVIVRDYAANMAGYRKLITEL  262
            +L+ M+  +  +S+   +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

79) TY21A_06420 in NC_021176


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  341 bits (1281),  Expect = 4e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 341/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTRAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT   ++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPASSTTNGSPATQAL----PMFAADPRQNAVIVRDYAANMAGYRKLITEL  262
            +L+ M+  +  +S+   +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

80) spiA in NC_004631


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  341 bits (1281),  Expect = 4e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 341/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTRAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT   ++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPASSTTNGSPATQAL----PMFAADPRQNAVIVRDYAANMAGYRKLITEL  262
            +L+ M+  +  +S+   +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLNLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

81) ssaC in NC_011274


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  341 bits (1280),  Expect = 5e-95, Method: Compositional matrix adjust.
 Identities = 212/485 (44%), Positives = 343/485 (71%), Gaps = 19/485 (3%)

Query  28   NDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNLAAQYDLL  87
            +++ + ++  P+  +L+ ++ NY  ++ IS+ +   FSG I    PV +L++L+  Y+L 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHL-  89

Query  88   TWF-DGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTKAVEV  146
            TW+ D ++LY+Y ++ + + +IT   L  + ++ YL     ++  +C+V+ IT  +++EV
Sbjct  90   TWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEV  149

Query  147  SGVPSCLTRISQLASVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQsvvvpgvvs  206
             GVP C+  I+ L+  LD+    +  +   V ++ L+YA+A D  Y+YRDQ+VVVPGVVS
Sbjct  150  RGVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVS  209

Query  207  vLREMSKTSVPASSTNNGSPATQAL----PMFAADPRQNAVIVRDYASNMAGYRKLITEL  262
            +L+ M+  +  +S+ + +   +  L      ++ADPR NAV+V+D    M  Y++LI+EL
Sbjct  210  ILKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISEL  269

Query  263  DQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVISDT  322
            D  Q+ IEISV IIDV+A D++QLG++W+ +++ G   IAFN++  ++  S  S+VIS++
Sbjct  270  DIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANIS--SSVISNA  327

Query  323  SNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSL  382
            SNFM+R+NAL+++S+A +LSQPS++TLNN+QA+LDKN+TFYTK+ GEKVA LESIT+G+L
Sbjct  328  SNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTL  387

Query  383  LRVTPRLLNDNGT-------QKIMLDLNIQDGQQSDTQSETD----PLPEVQNSEIASQA  431
            LRVTPR+L+D++        +++ L L+IQDG+QS  QS+++     LPEVQNSE++++A
Sbjct  388  LRVTPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEA  447

Query  432  TLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVIRLFLIKASVVN  491
            TL AG+SLLLGGF Q+K+  S++ IPLL+DIPV+G LF +   Q HSV+RLFLIKA+ ++
Sbjct  448  TLSAGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKATPIK  507

Query  492  NGISH  496
            ++ S+
Sbjct  508  SASSE  512

82) SG1282 in NC_007712


> GQ338312|43|G42|255348323|ACU09465.1|Escherichia_coli_71074|+|30900..32438|escC|-|type 
III secretion outer membrane pore 
YscC/HrcC family
Length=512

 Score =  319 bits (1196),  Expect = 2e-88, Method: Compositional matrix adjust.
 Identities = 201/474 (43%), Positives = 325/474 (69%), Gaps = 17/474 (3%)

Query  29   ADFSLRARQMPLSQVLSNLAENYDTVVIIDPEVNSYFSGFIPSGPPLVILNKLMSQYHLV  88
            +++ + ++  P+  +L+++A NY   V+I + VN  FSG I +  P+ +L+KL   YHL 
Sbjct  31   SEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHLT  90

Query  89   FYFDGDTLFIYPASRLKRQVITLRTLRAAEFVRYLQNRHVPESKSCEIRHIPDVNALDIS  148
             Y+D + L+IY ++ + R +IT   L    +++YL +    + +SC++R I   N++++ 
Sbjct  91   WYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEVR  150

Query  149  GVPACLERVSQLATMLDGELTKRKGEAVSMNIYPLKYATAMDDRYQYRDQTVLIPGIVSV  208
            GVP C+  ++ L+  LD E   +  +   ++++ L+YA+A D  Y+YRDQ V++PG+VS+
Sbjct  151  GVPECIKYITSLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVSI  210

Query  209  LRDMNRGAGAASPETTSPTQGLPMF------SADPRQNAVIVRDYAANMAGYRQLIAALD  262
            L+ M   ++ +S    +  ++  +F      SADPR NAV+V+D    M  Y+QLI+ LD
Sbjct  211  LKTMASNGSLPSTGKGAVERSGNLFDNSVTISADPRLNAVVVKDREITMDIYQQLISELD  270

Query  263  QRPQMIEIAVMIIDVDVGDINKLGIDWSGAMslggsgfsfnsdgdIRGGFSSVISNTNDF  322
               + IEI+V IIDVD  D+++LG++WSG+++ G + ++FNS        SSVISN+++F
Sbjct  271  IEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQGTIAFNSSTAQANISSSVISNASNF  330

Query  323  MVRLNVLEQRAHAYILSQPSVVTLNNIQAVLDKNVTFYTKLQGDKFAKLESVTTGSLLRV  382
            M+R+N L+Q + A ILSQPS++TLNN+QA+LDKNVTFYTK+ G+K A LES+T+G+LLRV
Sbjct  331  MIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTLLRV  390

Query  383  TPRLMEDQG-------KQNIMLSLNIQDGQQTS----PLSATDPLPQVQNSEIASQATLR  431
            TPR+++D +       ++ + L L+IQDG+Q++    +  A+  LP+VQNSE++++ATL 
Sbjct  391  TPRILDDSSNSLTGKRRERVRLLLDIQDGNQSTNQSNAQDASSTLPEVQNSEMTTEATLS  450

Query  432  PGQSlllggfqqdkqkqgqkkIPLLGDIPLLGHLFRSSIDETHSVMRLFLIKAT  485
            +G+SLLLGGF QDK+  ++  IPLL+DIP++G LF S++ + HSV+RLFLIKAT
Sbjct  451  AGESLLLGGFIQDKESSSKDGIPLLSDIPVIGSLFSSTVKQKHSVVRLFLIKAT  504