Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
IS orf |
NC_008253 (Escherichia coli 536) |
1e-92 |
100 |
|
transposase and inactivated derivatives |
NC_010660 (Shigella boydii CDC 3083-94) |
6e-59 |
92 |
|
transposase,IS66 family element |
NC_017319 (Shigella flexneri 2002017) |
1e-51 |
92 |
|
ISSfl4 ORF3 |
NC_007613 (Shigella boydii Sb227) |
2e-36 |
46 |
|
ISSfl4 ORF3 |
NC_004337 (Shigella flexneri 301) |
2e-36 |
46 |
|
ISSfl4 ORF3 |
NC_017328 (Shigella flexneri 2002017) |
3e-36 |
46 |
|
transposase |
NC_014723 (Burkholderia rhizoxinica HKI 454) |
5e-31 |
43 |
|
ISSfl3 orfC |
NC_004741 (Shigella flexneri 2457T) |
5e-27 |
44 |
|
ISSfl3 orfC |
NC_004741 (Shigella flexneri 2457T) |
5e-27 |
44 |
|
ISSfl4 ORF3 |
NC_017319 (Shigella flexneri 2002017) |
2e-25 |
43 |
|
ISSfl4 ORF3 |
NC_017328 (Shigella flexneri 2002017) |
2e-25 |
43 |
|
transposase, IS66 family |
NC_010529 (Cupriavidus taiwanensis LMG 19424) |
2e-16 |
43 |
|
hypothetical protein |
NC_004431 (Escherichia coli CFT073) |
5e-16 |
45 |
|
hypothetical protein |
NC_017652 (Escherichia coli clone D i14) |
5e-16 |
45 |
|
hypothetical protein |
NC_017651 (Escherichia coli clone D i2) |
5e-16 |
45 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='X16664' AND ph.id_pai_orf='42' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc