Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
Helix-turn-helix domain protein |
NC_017022 (Enterococcus faecium Aus0004) |
9e-31 |
100 |
|
Helix-turn-helix domain protein |
NC_021994 (Enterococcus faecium AUS0085) |
9e-31 |
100 |
|
hypothetical protein |
NC_021013 (Ruminococcus bromii L2-63) |
5e-17 |
59 |
|
hypothetical protein |
NC_021022 ([Ruminococcus] obeum A2-162) |
6e-15 |
59 |
|
conjugative transposon protein |
NC_009089 (Clostridium difficile 630) |
2e-13 |
55 |
|
hypothetical protein |
NC_021015 ([Ruminococcus] torques L2-14) |
4e-13 |
56 |
|
conjugative transposon protein |
NC_011660 (Listeria monocytogenes HCC23) |
8e-07 |
42 |
|
hypothetical protein |
NC_017529 (Listeria monocytogenes L99) |
8e-07 |
42 |
|
conjugative transposon protein |
NC_017537 (Listeria monocytogenes M7) |
8e-07 |
42 |
|
hypothetical protein |
NC_022238 (Streptococcus constellatus C1050) |
2e-06 |
44 |
|
hypothetical protein |
NC_022236 (Streptococcus constellatus C232) |
2e-06 |
44 |
|
hypothetical protein |
NC_022245 (Streptococcus constellatus C818) |
2e-06 |
44 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_021994_R1' AND ph.id_pai_orf='42' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc