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Homologs of hsdM gene of NC_007168_R1

314

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) hsdM
( YP_251979.1 )

type I restriction-modification system DNA methylase

NC_007168
(Staphylococcus haemolyticus JCSC1435)

0.0

100

2) M013TW_0063
( YP_005296533.1 )

Type I restriction-modification system,DNA-methyltransferase subunit M

NC_016928
(Staphylococcus aureus M013)

0.0

3) hsdM
( YP_008584156.1 )

type I restriction-modification system DNA methylase

NC_022442
(Staphylococcus aureus SA957)

0.0

4) hsdM
( YP_005754069.1 )

type I restriction-modification system DNA methylase

NC_017349
(Staphylococcus aureus LGA251)

0.0

5) hsdM
( YP_005738226.1 )

type I site-specific deoxyribonuclease methyltransferase subunit, HsdM

NC_017338
(Staphylococcus aureus JKD6159)

0.0

6) SAEMRSA15_00450
( YP_006236422.1 )

type I restriction-modification system DNA methylase

NC_017763
(Staphylococcus aureus HO 5096 0412)

0.0

7) Clocl_3625
( YP_005048018.1 )

type I restriction-modification system methyltransferase subunit

NC_016627
(Clostridium clariflavum DSM 19732)

1e-170

8) HM1_3075
( YP_001681591.1 )

N-6 DNA methylase

NC_010337
(Heliobacterium modesticaldum Ice1)

3e-169

9) Dacet_2555
( YP_003505270.1 )

adenine-specific DNA-methyltransferase

NC_013943
(Denitrovibrio acetiphilus DSM 12809)

7e-169

10) hsdM
( YP_004649012.1 )

type I restriction-modification system DNA-methyltransferase

NC_015697
(Lactobacillus reuteri SD2112)

1e-168

11) LRI_1103
( YP_008099457.1 )

N-6 DNA methylase

NC_021494
(Lactobacillus reuteri I5007)

3e-168

12) Lreu_0869
( YP_001271469.1 )

N-6 DNA methylase

NC_009513
(Lactobacillus reuteri DSM 20016)

4e-167

13) LAR_0816
( YP_001841812.1 )

type I restriction system DNA methylase

NC_010609
(Lactobacillus reuteri JCM 1112)

4e-167

14) Cylst_5223
( YP_007149937.1 )

type I restriction-modification system methyltransferase subunit

NC_019757
(Cylindrospermum stagnale PCC 7417)

5e-165

15) Mhun_2789
( YP_504202.1 )

N-6 DNA methylase

NC_007796
(Methanospirillum hungatei JF-1)

5e-165

16) Cyan7822_0692
( YP_003885999.1 )

adenine-specific DNA-methyltransferase

NC_014501
(Cyanothece sp. PCC 7822)

6e-165

17) LFE_0347
( YP_005468199.1 )

N-6 DNA methylase

NC_017094
(Leptospirillum ferrooxidans C2-3)

1e-164

18) hsdM2
( YP_005268560.1 )

type I restriction-modification system methyltransferase subunit HsdM2

NC_016894
(Acetobacterium woodii DSM 1030)

4e-163

19) hsdM
( YP_004570381.1 )

type I restriction-modification system DNA methylase

NC_015634
(Bacillus coagulans 2-6)

6e-163

20) Rhom172_1470
( YP_004825229.1 )

adenine-specific DNA-methyltransferase

NC_015966
(Rhodothermus marinus SG0.5JP17-172)

2e-162

21) Desdi_0308
( YP_007219252.1 )

type I restriction-modification system methyltransferase subunit

NC_019903
(Desulfitobacterium dichloroeliminans LMG P-21439)

4e-162

22) Ngar_c29130
( YP_006863489.1 )

N-6 DNA methylase

NC_018719
(Candidatus Nitrososphaera gargensis enrichment culture Ga9.2)

1e-161

23) AFE_2793
( YP_002427163.1 )

type I restriction-modification system, M subunit

NC_011761
(Acidithiobacillus ferrooxidans ATCC 23270)

1e-161

24) Lferr_2418
( YP_002220821.1 )

N-6 DNA methylase

NC_011206
(Acidithiobacillus ferrooxidans ATCC 53993)

1e-161

25) DCF50_p1411
( YP_006913402.1 )

Type I restriction-modification system, DNA-methyltransferase subunit M

NC_018867
(Dehalobacter sp. CF)

2e-161

26) Veis_3006
( YP_997757.1 )

N-6 DNA methylase

NC_008786
(Verminephrobacter eiseniae EF01-2)

2e-161

27) Galf_1218
( YP_003847010.1 )

adenine-specific DNA-methyltransferase

NC_014394
(Gallionella capsiferriformans ES-2)

2e-160

28) Amico_0449
( YP_003553314.1 )

N-6 DNA methylase

NC_014011
(Aminobacterium colombiense DSM 12261)

3e-160

29) SCE1572_29145
( YP_008152218.1 )

hypothetical protein

NC_021658
(Sorangium cellulosum So0157-2)

4e-160

30) GYMC52_2379
( YP_004132909.1 )

adenine-specific DNA-methyltransferase

NC_014915
(Geobacillus sp. Y412MC52)

2e-158

31) GYMC61_0286
( YP_003251461.1 )

adenine-specific DNA-methyltransferase

NC_013411
(Geobacillus sp. Y412MC61)

2e-158

32) hsdM
( YP_002952896.1 )

type I restriction enzyme M protein

NC_012796
(Desulfovibrio magneticus RS-1)

2e-158

33) hsdM1
( YP_001620582.1 )

type I site-specific restriction-modification system, M (modification) subunit

NC_010163
(Acholeplasma laidlawii PG-8A)

2e-157

34) hsdM
( YP_002759693.1 )

type I restriction-modification system DNA methylase

NC_012489
(Gemmatimonas aurantiaca T-27)

4e-157

35) CAP2UW1_2711
( YP_003167923.1 )

N-6 DNA methylase

NC_013194
(Candidatus Accumulibacter phosphatis UW-1)

1e-156

36) Acid345_3758
( YP_592832.1 )

N-6 DNA methylase

NC_008009
(Candidatus Koribacter versatilis Ellin345)

2e-156

37) Syn6312_0891
( YP_007060642.1 )

type I restriction-modification system methyltransferase subunit

NC_019680
(Synechococcus sp. PCC 6312)

1e-154

38) Caur_1810
( YP_001635416.1 )

N-6 DNA methylase

NC_010175
(Chloroflexus aurantiacus J-10-fl)

9e-155

39) Chy400_1958
( YP_002569689.1 )

N-6 DNA methylase

NC_012032
(Chloroflexus sp. Y-400-fl)

9e-155

40) GYY_04435
( YP_004742505.1 )

N-6 DNA methylase

NC_015847
(Methanococcus maripaludis X1)

2e-154

41) Turpa_2670
( YP_006440816.1 )

N-6 DNA methylase

NC_018020
(Turneriella parva DSM 21527)

3e-154

42) GWCH70_1644
( YP_002949697.1 )

N-6 DNA methylase

NC_012793
(Geobacillus sp. WCH70)

4e-154

43) MmarC6_0039
( YP_001548097.1 )

N-6 DNA methylase

NC_009975
(Methanococcus maripaludis C6)

4e-154

44) Dgeo_2017
( YP_605480.1 )

N-6 DNA methylase

NC_008025
(Deinococcus geothermalis DSM 11300)

6e-154

45) MmarC7_0019
( YP_001329241.1 )

N-6 DNA methylase

NC_009637
(Methanococcus maripaludis C7)

1e-153

46) hsdM-1
( YP_202096.1 )

type I restriction system adenine methylase

NC_006834
(Xanthomonas oryzae KACC10331)

3e-153

47) XOO_3262
( YP_452291.1 )

type I restriction system adenine methylase

NC_007705
(Xanthomonas oryzae MAFF 311018)

3e-153

48) Mzhil_1432
( YP_004616495.1 )

adenine-specific DNA-methyltransferase

NC_015676
(Methanosalsum zhilinae DSM 4017)

1e-152

49) Mrub_2453
( YP_003508224.1 )

adenine-specific DNA-methyltransferase

NC_013946
(Meiothermus ruber DSM 1279)

1e-152

50) K649_10265
( YP_007880842.1 )

adenine-specific DNA-methyltransferase

NC_021081
(Meiothermus ruber DSM 1279)

1e-152

51) PGA2_c07360
( YP_006561997.1 )

type I restriction-modification system, M subunit

NC_018286
(Phaeobacter gallaeciensis 2.10)

2e-150

52) Thein_1578
( YP_004626402.1 )

adenine-specific DNA-methyltransferase

NC_015681
(Thermodesulfatator indicus DSM 15286)

4e-150

53) GLX_22350
( YP_004869017.1 )

type I DNA methyltransferase M subunit

NC_016027
(Gluconacetobacter xylinus NBRC 3288)

6e-150

54) Veis_3128
( YP_997877.1 )

N-6 DNA methylase

NC_008786
(Verminephrobacter eiseniae EF01-2)

6e-149

55) hsdM-1
( NP_661571.1 )

type I restriction system adenine methylase

NC_002932
(Chlorobium tepidum TLS)

2e-147

56) SFBM_0018
( YP_004770543.1 )

type I restriction-modification system, methyltransferase subunit

NC_015913
(Candidatus Arthromitus sp. mouse isolate)

5e-147

57) rplK
( YP_005667736.1 )

50S ribosomal protein L11

NC_017294
(Candidatus Arthromitus sp. SFB-mouse-Yit)

5e-147

58) XF2742
( NP_300019.1 )

type I restriction-modification system DNA methylase

NC_002488
(Xylella fastidiosa 9a5c)

1e-146

59) hsdM
( YP_008105288.1 )

type I restriction-modification system DNA methylase

NC_021499
(Pseudomonas resinovorans NBRC 106553)

2e-146

60) SYN_00494
( YP_462083.1 )

type I restriction-modification system methylation subunit

NC_007759
(Syntrophus aciditrophicus SB)

1e-145

61) Ethha_0469
( YP_004090785.1 )

adenine-specific DNA-methyltransferase

NC_014828
(Ethanoligenens harbinense YUAN-3)

2e-145

62) Shel_17670
( YP_003144135.1 )

type I restriction-modification system methyltransferase subunit

NC_013165
(Slackia heliotrinireducens DSM 20476)

4e-145

63) F7308_0300
( YP_004646828.1 )

type I restriction-modification system, DNA-methyltransferase subunit M

NC_015696
(Francisella sp. TX077308)

7e-145

64) BHWA1_00436
( YP_002720605.1 )

N-6 DNA methylase

NC_012225
(Brachyspira hyodysenteriae WA1)

3e-144

65) AL1_19050
( YP_007817020.1 )

Type I restriction-modification system methyltransferase subunit

NC_021030
(Alistipes shahii WAL 8301)

9e-144

66) Alfi_1804
( YP_006410816.1 )

type I restriction-modification system methyltransferase subunit

NC_018011
(Alistipes finegoldii DSM 17242)

2e-143

67) Glaag_3862
( YP_004436057.1 )

adenine-specific DNA-methyltransferase

NC_015497
(Glaciecola sp. 4H-3-7+YE-5)

3e-143

68) Neut_0541
( YP_746781.1 )

N-6 DNA methylase

NC_008344
(Nitrosomonas eutropha C91)

8e-143

69) Tmath_1864
( YP_003677566.1 )

adenine-specific DNA-methyltransferase

NC_014209
(Thermoanaerobacter mathranii A3)

5e-142

70) R2APBS1_3877
( YP_007592163.1 )

type I restriction-modification system methyltransferase subunit

NC_020541
(Rhodanobacter sp. 2APBS1)

6e-142

71) hsdM
( YP_771130.1 )

putative type I restriction enzyme

NC_008384
(Rhizobium leguminosarum 3841)

8e-142

72) Mmol_0229
( YP_003047666.1 )

adenine-specific DNA-methyltransferase

NC_012968
(Methylotenera mobilis JLW8)

1e-141

73) Mbur_1222
( YP_565894.1 )

N-6 DNA methylase

NC_007955
(Methanococcoides burtonii DSM 6242)

2e-141

74) Calow_2047
( YP_004003358.1 )

Site-specific DNA-methyltransferase (adenine-specific)

NC_014657
(Caldicellulosiruptor owensensis OL)

2e-141

75) STH1910
( YP_075739.1 )

type I restriction-modification system DNA methylase

NC_006177
(Symbiobacterium thermophilum IAM 14863)

2e-141

76) hsdM-1
( YP_264164.1 )

type I restriction-modification system, M subunit

NC_007204
(Psychrobacter arcticus 273-4)

3e-141

77) Jden_2248
( YP_003162186.1 )

N-6 DNA methylase

NC_013174
(Jonesia denitrificans DSM 20603)

4e-141

78) DaAHT2_1004
( YP_003690324.1 )

Site-specific DNA-methyltransferase (adenine-specific)

NC_014216
(Desulfurivibrio alkaliphilus AHT2)

4e-141

79) hsdM
( YP_001854376.1 )

type I restriction enzyme M protein

NC_010617
(Kocuria rhizophila DC2201)

4e-141

80) BIL_01960
( YP_007766871.1 )

Type I restriction-modification system methyltransferase subunit

NC_021008
(Bifidobacterium longum F8)

4e-141

81) BLLJ_1481
( YP_004221240.1 )

DNA methylase

NC_015067
(Bifidobacterium longum JCM 1217)

4e-141

82) Mpet_1674
( YP_003894865.1 )

adenine-specific DNA-methyltransferase

NC_014507
(Methanoplanus petrolearius DSM 11571)

7e-141

83) FP2_17100
( YP_007837444.1 )

Type I restriction-modification system methyltransferase subunit

NC_021042
(Faecalibacterium prausnitzii L2/6)

8e-141

84) hsdM
( YP_006762595.1 )

type I restriction modification system, M subunit HsdM

NC_018645
(Desulfobacula toluolica Tol2)

3e-140

85) Desru_3582
( YP_004547071.1 )

adenine-specific DNA-methyltransferase

NC_015589
(Desulfotomaculum ruminis DSM 2154)

4e-140

86) hsdM
( YP_003189355.1 )

type I DNA methyltransferase M subunit HsdM

NC_013211
(Acetobacter pasteurianus IFO 3283)

7e-140

87) hsdM
( YP_005479602.1 )

type I DNA methyltransferase M subunit HsdM

NC_017105
(Acetobacter pasteurianus IFO 3283)

7e-140

88) hsdM
( YP_005485098.1 )

type I DNA methyltransferase M subunit HsdM

NC_017113
(Acetobacter pasteurianus IFO 3283)

7e-140

89) hsdM
( YP_005485517.1 )

type I DNA methyltransferase M subunit HsdM

NC_017118
(Acetobacter pasteurianus IFO 3283)

7e-140

90) hsdM
( YP_005488382.1 )

type I DNA methyltransferase M subunit HsdM

NC_017122
(Acetobacter pasteurianus IFO 3283)

7e-140

91) hsdM
( YP_005491188.1 )

type I DNA methyltransferase M subunit HsdM

NC_017126
(Acetobacter pasteurianus IFO 3283)

7e-140

92) hsdM
( YP_005491606.1 )

type I DNA methyltransferase M subunit HsdM

NC_017131
(Acetobacter pasteurianus IFO 3283)

7e-140

93) hsdM
( YP_005500355.1 )

type I DNA methyltransferase M subunit HsdM

NC_017149
(Acetobacter pasteurianus IFO 3283)

7e-140

94) FP2_13100
( YP_007837109.1 )

Type I restriction-modification system methyltransferase subunit

NC_021042
(Faecalibacterium prausnitzii L2/6)

1e-139

95) CLS_14440
( YP_007849054.1 )

Type I restriction-modification system methyltransferase subunit

NC_021047
(Clostridium saccharolyticum K10)

9e-140

96) ECS88_4968
( YP_002394438.1 )

type I restriction-modification system methyltransferase subunit; (hsdM-like)

NC_011742
(Escherichia coli S88)

2e-139

97) ECNA114_4590
( YP_006141712.1 )

Putative type I restriction-modification system,DNA-methyltransferase subunit M

NC_017644
(Escherichia coli NA114)

3e-139

98) MM_2198
( NP_634222.1 )

type I restriction-modification system specificity subunit

NC_003901
(Methanosarcina mazei Go1)

4e-139

99) hsdM
( YP_006171408.1 )

Type I restriction-modification system methyltransferase subunit

NC_017663
(Escherichia coli P12b)

5e-139

100) MmTuc01_2250
( YP_007490844.1 )

Type I restriction-modification system, DNA- methyltransferase subunit M

NC_020389
(Methanosarcina mazei Tuc01)

1e-138

101) Desgi_1008
( YP_007944222.1 )

type I restriction-modification system methyltransferase subunit

NC_021184
(Desulfotomaculum gibsoniae DSM 7213)

7e-139

102) Pcryo_1359
( YP_580622.1 )

N-6 DNA methylase

NC_007969
(Psychrobacter cryohalolentis K5)

7e-139

103) PSYCG_07145
( YP_008163299.1 )

DNA methyltransferase

NC_021661
(Psychrobacter sp. G)

7e-139

104) Clocl_1695
( YP_005046233.1 )

type I restriction-modification system methyltransferase subunit

NC_016627
(Clostridium clariflavum DSM 19732)

8e-139

105) Zmob_1779
( YP_005527872.1 )

adenine-specific DNA-methyltransferase

NC_017180
(Zymomonas mobilis ATCC 10988)

1e-138

106) alr4597
( NP_488637.1 )

type I restriction-modification system DNA methylase

NC_003272
(Nostoc sp. PCC 7120)

1e-138

107) Metho_1314
( YP_007313066.1 )

type I restriction-modification system methyltransferase subunit

NC_019977
(Methanomethylovorans hollandica DSM 15978)

3e-138

108) Tbis_2509
( YP_003653105.1 )

site-specific DNA-methyltransferase

NC_014165
(Thermobispora bispora DSM 43833)

6e-138

109) G432_08505
( YP_007616022.1 )

N-6 DNA methylase

NC_020561
(Sphingomonas sp. MM-1)

1e-137

110) HMPREF0868_0489
( YP_003474820.1 )

putative type I restriction-modification system, M subunit

NC_013895
(Clostridiales genomosp. UPII9-5)

1e-137

111) NIS_1707
( YP_001357170.1 )

type I restriction-modification system, M subunit

NC_009662
(Nitratiruptor sp. SB155-2)

2e-137

112) Anacy_6051
( YP_007160098.1 )

Site-specific DNA-methyltransferase (adenine-specific)

NC_019773
(Anabaena cylindrica PCC 7122)

2e-137

113) Calni_0575
( YP_004050650.1 )

site-specific DNA-methyltransferase (adenine-specific)

NC_014758
(Calditerrivibrio nitroreducens DSM 19672)

2e-137

114) hsdM
( YP_002229048.1 )

type I restriction-modification system methyltransferase

NC_011274
(Salmonella enterica 287/91)

2e-137

115) hsdM
( YP_008484007.1 )

Type I restriction-modification system methyltransferase

NC_022221
(Salmonella enterica CDC1983-67)

2e-137

116) SeD_A4931
( YP_002218397.1 )

type I restriction-modification system, M subunit

NC_011205
(Salmonella enterica CT_02021853)

2e-137

117) hsdM
( YP_002246303.1 )

type I restriction-modification system methyltransferase

NC_011294
(Salmonella enterica P125109)

2e-137

118) hsdM
( YP_005215545.1 )

Type I restriction-modification system methyltransferase

NC_016831
(Salmonella enterica RKS5078)

2e-137

119) I137_21565
( YP_008383593.1 )

DNA methyltransferase

NC_021984
(Salmonella enterica S06004)

2e-137

120) TEQUI_0820
( YP_004129901.1 )

type I restriction-modification system, DNA-methyltransferase subunit M

NC_014914
(Taylorella equigenitalis MCE9)

4e-137

121) TREAZ_2435
( YP_004528983.1 )

type I restriction-modification system, M subunit

NC_015577
(Treponema azotonutricium ZAS-9)

4e-137

122) O159_11410
( YP_008579804.1 )

methyltransferase

NC_022438
(Leifsonia xyli DSM 46306)

4e-137

123) Kvar_4504
( YP_003441410.1 )

adenine-specific DNA-methyltransferase

NC_013850
(Klebsiella variicola At-22)

5e-137

124) Ppro_1858
( YP_901527.1 )

N-6 DNA methylase

NC_008609
(Pelobacter propionicus DSM 2379)

5e-137

125) SEEB0189_19740
( YP_008310228.1 )

DNA methyltransferase

NC_021844
(Salmonella enterica CFSAN000189)

5e-137

126) Nhal_0897
( YP_003526459.1 )

adenine-specific DNA-methyltransferase

NC_013960
(Nitrosococcus halophilus Nc 4)

6e-137

127) ETAC_09220
( YP_007629325.1 )

type I restriction-modification system, M subunit

NC_020796
(Edwardsiella tarda C07-087)

6e-137

128) Spica_2702
( YP_004699307.1 )

site-specific DNA-methyltransferase

NC_015732
(Treponema caldaria DSM 7334)

2e-136

129) CE2327
( NP_738937.1 )

type I restriction-modification system methylase

NC_004369
(Corynebacterium efficiens YS-314)

2e-136

130) hsdM
( YP_004887393.1 )

type I restriction-modification system DNA methylase

NC_016052
(Tetragenococcus halophilus NBRC 12172)

3e-136

131) Bcav_3915
( YP_002883918.1 )

N-6 DNA methylase

NC_012669
(Beutenbergia cavernae DSM 12333)

2e-135

132) KN400_0451
( YP_006889495.1 )

type I restriction-modification system DNA adenine N6-methyltransferase

NC_017454
(Geobacter sulfurreducens KN400)

7e-135

133) hsdM2
( YP_003623495.1 )

type I restriction-modification (R-M) system HsdM

NC_014145
(Thiomonas sp. 3As)

3e-134

134) MROS_1293
( YP_006527543.1 )

N-6 DNA methylase

NC_018178
(Melioribacter roseus P3M-2)

1e-133

135) NT01EI_1012
( YP_002932459.1 )

type I restriction-modification system, M subunit

NC_012779
(Edwardsiella ictaluri 93-146)

1e-133

136) Cag_1120
( YP_379425.1 )

type I restriction-modification system specificity subunit

NC_007514
(Chlorobium chlorochromatii CaD3)

7e-134

137) EcE24377A_2909
( YP_001463944.1 )

N4/N6-methyltransferase

NC_009801
(Escherichia coli E24377A)

7e-134

138) FNFX1_0289
( YP_005825197.1 )

hypothetical protein

NC_017450
(Francisella novicida Fx1)

8e-134

139) Namu_1102
( YP_003200498.1 )

adenine-specific DNA-methyltransferase

NC_013235
(Nakamurella multipartita DSM 44233)

2e-133

140) hsdM1
( YP_003623198.1 )

type I restriction-modification (R-M) system HsdM

NC_014145
(Thiomonas sp. 3As)

3e-133

141) hsdM3
( YP_003626025.1 )

type I restriction-modification (R-M) system HsdM

NC_014145
(Thiomonas sp. 3As)

3e-133

142) Rfer_4006
( YP_525235.1 )

N-6 DNA methylase

NC_007908
(Rhodoferax ferrireducens T118)

4e-133

143) Mpe_A0005
( YP_001019202.1 )

type I restriction-modification system, M subunit

NC_008825
(Methylibium petroleiphilum PM1)

4e-133

144) FMG_1377
( YP_001692685.1 )

type I restriction-modification system DNA methylase

NC_010376
(Finegoldia magna ATCC 29328)

5e-133

145) CJA_3640
( YP_001984093.1 )

type I restriction-modification system specificity subunit

NC_010995
(Cellvibrio japonicus Ueda107)

6e-133

146) PP1Y_AT2797
( YP_004533068.1 )

putative type I restriction enzyme

NC_015580
(Novosphingobium sp. PP1Y)

9e-133

147) APECO78_16840
( YP_007382533.1 )

adenine-specific DNA-methyltransferase

NC_020163
(Escherichia coli APEC O78)

1e-132

148) Nit79A3_0882
( YP_004694151.1 )

N-6 DNA methylase

NC_015731
(Nitrosomonas sp. Is79A3)

2e-132

149) CJJ81176_1539
( YP_001001194.1 )

type I restriction-modification system, M subunit

NC_008787
(Campylobacter jejuni 81-176)

5e-132

150) hsdM
( YP_005656822.1 )

putative type I restriction enzyme M protein

NC_017279
(Campylobacter jejuni IA3902)

5e-132

151) hsdM
( YP_002344925.1 )

type I restriction enzyme M protein

NC_002163
(Campylobacter jejuni NCTC 11168)

5e-132

152) hsdM
( YP_006633673.1 )

type I restriction enzyme M protein

NC_018521
(Campylobacter jejuni NCTC 11168-BN148)

5e-132

153) A911_07480
( YP_006858540.1 )

putative type I restriction enzyme M protein

NC_018709
(Campylobacter jejuni PT14)

5e-132

154) hsdM
( YP_008562902.1 )

putative type I restriction enzyme M protein

NC_022362
(jejuni jejuni 00-2425)

5e-132

155) hsdM
( YP_008541149.1 )

putative type I restriction enzyme M protein

NC_022352
(jejuni jejuni 00-2426)

5e-132

156) hsdM
( YP_008539465.1 )

putative type I restriction enzyme M protein

NC_022351
(jejuni jejuni 00-2538)

5e-132

157) hsdM
( YP_008542870.1 )

putative type I restriction enzyme M protein

NC_022353
(jejuni jejuni 00-2544)

5e-132

158) Arth_0988
( YP_830485.1 )

N-6 DNA methylase

NC_008541
(Arthrobacter sp. FB24)

5e-132

159) HMPREF0389_01041
( YP_005055171.1 )

type I restriction-modification system, M subunit

NC_016630
(Filifactor alocis ATCC 35896)

1e-131

160) Sros_7556
( YP_003342978.1 )

Site-specific DNA-methyltransferase

NC_013595
(Streptosporangium roseum DSM 43021)

1e-131

161) Franean1_3767
( YP_001508068.1 )

N-6 DNA methylase

NC_009921
(Frankia sp. EAN1.pec)

1e-131

162) Sputcn32_2908
( YP_001184424.1 )

N-6 DNA methylase

NC_009438
(Shewanella putrefaciens CN-32)

4e-131

163) Cagg_3300
( YP_002464585.1 )

N-6 DNA methylase

NC_011831
(Chloroflexus aggregans DSM 9485)

5e-131

164) Metme_1963
( YP_004512875.1 )

adenine-specific DNA methyltransferase

NC_015572
(Methylomonas methanica MC09)

8e-131

165) NAL212_2263
( YP_004295248.1 )

adenine-specific DNA-methyltransferase

NC_015222
(Nitrosomonas sp. AL212)

8e-131

166) Sulba_2350
( YP_006405194.1 )

type I restriction-modification system methyltransferase subunit

NC_018002
(Sulfurospirillum barnesii SES-3)

3e-130

167) Cyan7425_3148
( YP_002483837.1 )

N-6 DNA methylase

NC_011884
(Cyanothece sp. PCC 7425)

4e-130

168) HCBAA847_2281
( YP_007602127.1 )

type I restriction-modification system

NC_020555
(Helicobacter cinaedi ATCC BAA-847)

1e-129

169) hsdM
( NP_840472.1 )

hsdM; site-specific DNA-methyltransferase, type I modification

NC_004757
(Nitrosomonas europaea ATCC 19718)

9e-130

170) CAP2UW1_1873
( YP_003167100.1 )

N-6 DNA methylase

NC_013194
(Candidatus Accumulibacter phosphatis UW-1)

2e-129

171) Psest_4048
( YP_007242148.1 )

type I restriction-modification system methyltransferase subunit

NC_019936
(Pseudomonas stutzeri RCH2)

2e-129

172) A458_03940
( YP_006456463.1 )

type I restriction-modification system, M subunit

NC_018028
(Pseudomonas stutzeri CCUG 29243)

1e-128

173) hsdM
( YP_004715768.1 )

type I restriction-modification system, M subunit

NC_015740
(Pseudomonas stutzeri ATCC 17588)

2e-128

174) CDCE8392_2206
( YP_005134737.1 )

putative type I restriction/modification system DNA methylase

NC_016785
(Corynebacterium diphtheriae CDCE 8392)

2e-128

175) Oweho_0002
( YP_004987674.1 )

type I restriction-modification system methyltransferase subunit

NC_016599
(Owenweeksia hongkongensis DSM 17368)

4e-128

176) Isova_0872
( YP_004541550.1 )

adenine-specific DNA-methyltransferase

NC_015588
(Isoptericola variabilis 225)

6e-128

177) BN117_0855
( YP_006894871.1 )

Site-specific DNA-methyltransferase, type I modification

NC_018828
(Bordetella parapertussis Bpp5)

7e-128

178) Pnap_4777
( YP_973928.1 )

N-6 DNA methylase

NC_008761
(Polaromonas naphthalenivorans CJ2)

1e-127

179) Bpro_1940
( YP_548769.1 )

N-6 DNA methylase

NC_007948
(Polaromonas sp. JS666)

1e-127

180) Rfer_0032
( YP_521325.1 )

N-6 DNA methylase

NC_007908
(Rhodoferax ferrireducens T118)

1e-127

181) H650_18285
( YP_008109411.1 )

DNA methyltransferase

NC_021500
(Enterobacter sp. R4-368)

1e-127

182) hsdM3
( YP_249266.1 )

type I restriction enzyme HindVIIP M protein

NC_007146
(Haemophilus influenzae 86-028NP)

2e-127

183) Nwat_1303
( YP_003760550.1 )

adenine-specific DNA-methyltransferase

NC_014315
(Nitrosococcus watsonii C-113)

2e-127

184) PCC21_032490
( YP_006647905.1 )

type I restriction-modification system, M subunit

NC_018525
(Pectobacterium carotovorum PCC21)

3e-127

185) DIP2314
( NP_940616.1 )

type I restriction/modification system DNA methylase

NC_002935
(Corynebacterium diphtheriae NCTC13129)

4e-127

186) CDBH8_2312
( YP_005161392.1 )

putative type I restriction/modification system DNA methylase

NC_016800
(Corynebacterium diphtheriae BH8)

5e-127

187) CFSAN002050_05885
( YP_008259123.1 )

DNA methyltransferase

NC_021818
(Salmonella enterica CFSAN002050)

5e-127

188) PARA_15900
( YP_004823276.1 )

hypothetical protein

NC_015964
(Haemophilus parainfluenzae T3T1)

6e-127

189) ESA_00614
( YP_001436734.1 )

hypothetical protein

NC_009778
(Cronobacter sakazakii ATCC BAA-894)

6e-127

190) hsdM1
( YP_008544349.1 )

putative type I restriction enzyme HindVII

NC_022356
(Haemophilus influenzae KR494)

7e-127

191) hsdM3
( YP_004135183.1 )

type i restriction enzyme hindviip m protein

NC_014920
(Haemophilus influenzae F3031)

1e-126

192) Shewana3_4240
( YP_863755.1 )

N-6 DNA methylase

NC_008573
(Shewanella sp. ANA-3)

8e-127

193) Ser39006_0957
( YP_008521339.1 )

Site-specific DNA-methyltransferase (adenine-specific)

NC_022268
(Serratia sp. ATCC 39006)

9e-127

194) CGSHiGG_01525
( YP_001291768.1 )

putative type I restriction enzyme HindVIIP M protein

NC_009567
(Haemophilus influenzae PittGG)

2e-126

195) hsdM
( YP_005446846.1 )

type I restriction-modification system modification subunit

NC_017080
(Phycisphaera mikurensis NBRC 102666)

2e-126

196) Tola_1220
( YP_002892423.1 )

adenine-specific DNA-methyltransferase

NC_012691
(Tolumonas auensis DSM 9187)

2e-126

197) CD241_2201
( YP_005126455.1 )

putative type I restriction/modification system DNA methylase

NC_016782
(Corynebacterium diphtheriae 241)

3e-126

198) CDHC01_2201
( YP_005136990.1 )

putative type I restriction/modification system DNA methylase

NC_016786
(Corynebacterium diphtheriae HC01)

3e-126

199) MARHY0353
( YP_005428278.1 )

type I restriction enzyme HindVIIP M protein

NC_017067
(Marinobacter hydrocarbonoclasticus ATCC 49840)

3e-126

200) CD31A_2338
( YP_005159030.1 )

putative type I restriction/modification system DNA methylase

NC_016799
(Corynebacterium diphtheriae 31A)

4e-126

201) CDC7B_2290
( YP_005163729.1 )

putative type I restriction/modification system DNA methylase

NC_016801
(Corynebacterium diphtheriae C7 (beta))

4e-126

202) hsdM
( NP_439439.2 )

type I modification enzyme

NC_000907
(Haemophilus influenzae Rd KW20)

5e-126

203) EcE24377A_0286
( YP_001461440.1 )

N4/N6-methyltransferase

NC_009801
(Escherichia coli E24377A)

5e-126

204) Mvan_0034
( YP_950891.1 )

N-6 DNA methylase

NC_008726
(Mycobacterium vanbaalenii PYR-1)

5e-126

205) Achl_1096
( YP_002487178.1 )

N-6 DNA methylase

NC_011886
(Arthrobacter chlorophenolicus A6)

6e-126

206) hsdM1
( YP_007415995.1 )

type I restriction-modification system, methyltransferase subunit

NC_020230
(Corynebacterium urealyticum DSM 7111)

6e-126

207) CDHC04_2221
( YP_005141528.1 )

putative type I restriction/modification system DNA methylase

NC_016788
(Corynebacterium diphtheriae HC04)

6e-126

208) PACID_07550
( YP_006979948.1 )

N-6 DNA methylase

NC_019395
(Propionibacterium acidipropionici ATCC 4875)

6e-126

209) Maqu_3380
( YP_960638.1 )

N-6 DNA methylase

NC_008740
(Marinobacter aquaeolei VT8)

6e-126

210) Desaf_3447
( YP_005053392.1 )

adenine-specific DNA-methyltransferase

NC_016629
(Desulfovibrio africanus Walvis Bay)

7e-126

211) AMIS_67070
( YP_005466443.1 )

putative restriction-modification system methyltransferase

NC_017093
(Actinoplanes missouriensis 431)

1e-125

212) hsdM1
( YP_001799541.1 )

type I restriction-modification system, methyltransferase subunit

NC_010545
(Corynebacterium urealyticum DSM 7109)

3e-125

213) CYCME_0988
( YP_008373680.1 )

Type I restriction-modification system methyltransferase subunit

NC_021917
(Cycloclasticus zancles 7-ME)

3e-125

214) BN4_12245
( YP_007494631.1 )

putative type I restriction enzyme HindVIIP M protein

NC_020409
(Desulfovibrio piezophilus C1TLV30)

4e-125

215) EpC_05870
( YP_002647619.1 )

type I restriction modification DNA modification domain-containing protein

NC_012214
(Erwinia pyrifoliae Ep1/96)

4e-125

216) SHJG_6168
( YP_006247308.1 )

N-6 DNA methylase

NC_017765
(Streptomyces hygroscopicus 5008)

6e-124

217) SHJGH_5930
( YP_007694927.1 )

N-6 DNA methylase

NC_020895
(Streptomyces hygroscopicus TL01)

6e-124

218) hsdM
( YP_007265483.1 )

Putative type I restriction/modification system DNA methylase HsdM (M protein) (DNA methyltransferase)

NC_019951
(Mycobacterium canettii CIPT 140070010)

1e-123

219) Acav_4677
( YP_004237123.1 )

adenine-specific DNA-methyltransferase

NC_015138
(Acidovorax avenae ATCC 19860)

3e-123

220) hsdM
( NP_790920.1 )

type I restriction-modification system, M subunit

NC_004578
(Pseudomonas syringae DC3000)

3e-123

221) hsdM
( YP_002474980.1 )

Type I restriction-modification system methyltransferase subunit

NC_011852
(Haemophilus parasuis SH0165)

3e-123

222) Sbal223_4473
( YP_002364294.1 )

N-6 DNA methylase

NC_011668
(Shewanella baltica OS223)

4e-123

223) hsdM
( YP_007261502.1 )

Putative type I restriction/modification system DNA methylase HsdM (M protein) (DNA methyltransferase)

NC_019950
(Mycobacterium canettii CIPT 140060008)

1e-122

224) hsdM
( NP_856423.1 )

type I restriction/modification system DNA methylase HsdM

NC_002945
(Mycobacterium bovis AF2122/97)

6e-123

225) hsdM
( YP_978858.1 )

type I restriction/modification system DNA methylase hsdM

NC_008769
(Mycobacterium bovis BCG Pasteur 1173P2)

6e-123

226) K60_028500
( YP_007431908.1 )

type I restriction system adenine methylase

NC_020245
(Mycobacterium bovis Korea 1168P)

6e-123

227) hsdM
( YP_005172222.1 )

putative type I restriction/modification system DNA methylase

NC_016804
(Mycobacterium bovis Mexico)

6e-123

228) hsdM
( YP_002645815.1 )

type I restriction/modification system DNA methylase

NC_012207
(Mycobacterium bovis Tokyo 172)

6e-123

229) hsdM
( YP_004746209.1 )

putative type I restriction/modification system DNA methylase HSDM

NC_015848
(Mycobacterium canettii CIPT 140010059)

6e-123

230) MT7199_2789
( YP_007352526.1 )

putative TYPE I RESTRICTION/MODIFICATION SYSTEM DNA METHYLASE HSDM (M protein) (DNA METHYLTRANSFERASE)

NC_020089
(Mycobacterium tuberculosis 7199-99)

6e-123

231) J112_14765
( YP_007855764.1 )

type I restriction/modification system DNAmethylase

NC_021054
(Mycobacterium tuberculosis Beijing/NITR203)

6e-123

232) CCDC5180_2499
( YP_005910331.1 )

type I restriction system adenine methylase

NC_017522
(Mycobacterium tuberculosis CCDC5180)

6e-123

233) hsdM
( NP_337331.1 )

type I restriction system adenine methylase

NC_002755
(Mycobacterium tuberculosis CDC1551)

6e-123

234) M943_14240
( YP_008226851.1 )

type I restriction endonuclease subunit M

NC_021740
(Mycobacterium tuberculosis EAI5)

6e-123

235) J114_14705
( YP_007966672.1 )

type I restriction/modification system DNAmethylase

NC_021194
(Mycobacterium tuberculosis EAI5/NITR206)

6e-123

236) hsdM
( YP_007611478.1 )

type I restriction/modification system DNAmethylase

NC_020559
(Mycobacterium tuberculosis Erdman (ATCC35801))

6e-123

237) TBHG_02688
( YP_002159713.1 )

type I restriction/modification system DNA methylase HsdM

NC_022350
(Mycobacterium tuberculosis Haarlem)

6e-123

238) MRGA423_17110
( YP_005923909.1 )

type I restriction/modification system DNA methylase HSDM

NC_017528
(Mycobacterium tuberculosis RGTB423)

6e-123

239) hsdM
( YP_004724410.1 )

type I restriction/modification system DNA methylase HSDM

NC_015758
(Mycobacterium africanum GM041182)

7e-123

240) hsdM
( YP_005801362.1 )

type I restriction-modification system DNA methylase

NC_017390
(Erwinia pyrifoliae DSM 12163)

7e-123

241) J113_19130
( YP_007962631.1 )

type I restriction/modification system DNAmethylase

NC_021193
(Mycobacterium tuberculosis CAS/NITR204)

8e-123

242) PT7_2210
( YP_004417374.1 )

Type I restriction-modification system, M subunit

NC_015458
(Pusillimonas sp. T7-7)

1e-122

243) hsdM
( YP_007288701.1 )

Putative type I restriction/modification system DNA methylase HsdM (M protein) (DNA methyltransferase)

NC_019965
(Mycobacterium canettii CIPT 140070008)

1e-122

244) hsdM
( YP_007269443.1 )

Putative type I restriction/modification system DNA methylase HsdM (M protein) (DNA methyltransferase)

NC_019952
(Mycobacterium canettii CIPT 140070017)

3e-122

245) Plabr_4421
( YP_004272015.1 )

adenine-specific DNA-methyltransferase

NC_015174
(Planctomyces brasiliensis DSM 5305)

3e-122

246) hsdM
( YP_005917836.1 )

type I restriction/modification system DNA methylase HsdM

NC_017524
(Mycobacterium tuberculosis CTRI-2)

6e-122

247) TBFG_12769
( YP_001288698.1 )

type I restriction/modification system DNA methylase hsdM

NC_009565
(Mycobacterium tuberculosis F11)

6e-122

248) hsdM
( YP_001284121.1 )

type I restriction/modification system DNA methylase HsdM

NC_009525
(Mycobacterium tuberculosis H37Ra)

6e-122

249) hsdM
( NP_217272.1 )

Possible type I restriction/modification system DNA methylase HsdM (M protein) (DNA methyltransferase)

NC_000962
(Mycobacterium tuberculosis H37Rv)

6e-122

250) RVBD_2756c
( YP_006516201.1 )

type I restriction enzyme M protein

NC_018143
(Mycobacterium tuberculosis H37Rv)

6e-122

251) TBMG_01219
( YP_003031163.1 )

type I restriction/modification system DNA methylase hsdM

NC_012943
(Mycobacterium tuberculosis KZN 1435)

6e-122

252) TBSG_01229
( YP_005099697.1 )

type I restriction/modification system DNA methylase hsdM

NC_016768
(Mycobacterium tuberculosis KZN 4207)

6e-122

253) TBXG_001209
( YP_006472682.1 )

type I restriction/modification system DNA methylase hsdM

NC_018078
(Mycobacterium tuberculosis KZN 605)

6e-122

254) hsdM
( YP_005309017.1 )

hypothetical protein

NC_016934
(Mycobacterium tuberculosis UT205)

6e-122

255) VFMJ11_B0053
( YP_002157415.1 )

type I restriction-modification system, M subunit

NC_011185
(Vibrio fischeri MJ11)

1e-121

256) Desal_2735
( YP_002992328.1 )

site-specific DNA-methyltransferase (adenine-specific)

NC_012881
(Desulfovibrio salexigens DSM 2638)

1e-121

257) FNFX1_0641
( YP_005825549.1 )

hypothetical protein

NC_017450
(Francisella novicida Fx1)

4e-120

258) NT08PM_1864
( YP_006240729.1 )

type I restriction system adenine methylase

NC_017764
(Pasteurella multocida 3480)

6e-120

259) MM_0429
( NP_632453.1 )

type I restriction-modification system methylation subunit

NC_003901
(Methanosarcina mazei Go1)

1e-118

260) hsdM
( YP_007595115.1 )

type I restriction-modification system, DNA-methyltransferase subunit M

NC_020547
(Acinetobacter baumannii D1279779)

2e-118

261) Mbur_0483
( YP_565216.1 )

N-6 DNA methylase

NC_007955
(Methanococcoides burtonii DSM 6242)

2e-118

262) Pedsa_1279
( YP_004273668.1 )

adenine-specific DNA-methyltransferase

NC_015177
(Pedobacter saltans DSM 12145)

2e-118

263) Fluta_2798
( YP_004345616.1 )

adenine-specific DNA methyltransferase

NC_015321
(Fluviicola taffensis DSM 16823)

2e-118

264) EJP617_05140
( YP_005817082.1 )

Type I restriction modification DNA modification domain protein

NC_017445
(Erwinia sp. Ejp617)

3e-118

265) hsdM
( NP_246476.1 )

hypothetical protein

NC_002663
(Pasteurella multocida Pm70)

5e-118

266) I917_19320
( YP_007958764.1 )

type I restriction system adenine methylase

NC_021192
(Mycobacterium tuberculosis Haarlem/NITR202)

8e-118

267) Metok_1382
( YP_004577125.1 )

adenine-specific DNA methyltransferase

NC_015636
(Methanothermococcus okinawensis IH1)

2e-117

268) D650_9870
( YP_007665764.1 )

N-6 DNA methylase

NC_020833
(Mannheimia haemolytica USDA-ARS-USMARC-183)

3e-117

269) Aflv_2059
( YP_002316403.1 )

type I restriction-modification system methyltransferase subunit

NC_011567
(Anoxybacillus flavithermus WK1)

6e-117

270) GHH_c13080
( YP_007401596.1 )

putative type I restriction enzyme HindVIIP M protein

NC_020210
(Geobacillus sp. GHH01)

8e-117

271) hsdM
( YP_001850264.1 )

type I restriction/modification system DNA methylase HsdM

NC_010612
(Mycobacterium marinum M)

9e-117

272) Belba_2142
( YP_006407464.1 )

type I restriction-modification system methyltransferase subunit

NC_018010
(Belliella baltica DSM 15883)

3e-116

273) F382_03170
( YP_008233516.1 )

type I restriction endonuclease HindVIIP subunit M

NC_021743
(Mannheimia haemolytica D153)

1e-115

274) hsdM
( YP_007368520.1 )

type I restriction/modification system DNA methylase HsdM

NC_020133
(Mycobacterium liflandii 128FXT)

6e-116

275) Belba_0101
( YP_006405527.1 )

type I restriction-modification system methyltransferase subunit

NC_018010
(Belliella baltica DSM 15883)

1e-115

276) Fphi_0190
( YP_001676909.1 )

type I restriction-modification system methyltransferase subunit-like protein

NC_010336
(Francisella philomiragia ATCC 25017)

2e-115

277) RBAM_007140
( YP_001420330.1 )

type I restriction-modification system methyltransferase subunit like protein

NC_009725
(Bacillus amyloliquefaciens FZB42)

3e-115

278) RTO_30870
( YP_007787990.1 )

Type I restriction-modification system methyltransferase subunit

NC_021015
([Ruminococcus] torques L2-14)

5e-115

279) EUS_01180
( YP_007774377.1 )

Type I restriction-modification system methyltransferase subunit

NC_021011
(Eubacterium siraeum 70/3)

6e-115

280) Geoth_2026
( YP_004588050.1 )

adenine-specific DNA-methyltransferase

NC_015660
(Geobacillus thermoglucosidasius C56-YS93)

6e-115

281) ASU2_03895
( YP_006817156.1 )

putative type I modification enzyme

NC_018690
(Actinobacillus suis H91-0380)

1e-114

282) GY4MC1_1947
( YP_003989308.1 )

adenine-specific DNA-methyltransferase

NC_014650
(Geobacillus sp. Y4.1MC1)

7e-115

283) hsdM1
( YP_008007745.1 )

N-terminal truncated type I restriction/modification system DNA methylase HsdM

NC_021251
(Mycobacterium tuberculosis CCDC5079)

2e-114

284) Dacet_2667
( YP_003505380.1 )

N-6 DNA methylase

NC_013943
(Denitrovibrio acetiphilus DSM 12809)

2e-114

285) LBU_1048
( YP_005852257.1 )

HsdM

NC_017469
(Lactobacillus delbrueckii 2038)

9e-115

286) J450_02370
( YP_008219536.1 )

type I restriction endonuclease HindVIIP subunit M

NC_021738
(Mannheimia haemolytica D171)

3e-114

287) M493_07015
( REF_PRJNA208285:M493 )

DNA methyltransferase

NC_022080
(Geobacillus sp. JF8)

4e-114

288) GK1380
( YP_147233.1 )

type I restriction-modification system DNA methylase

NC_006510
(Geobacillus kaustophilus HTA426)

1e-113

289) UMN179_00643
( YP_004419574.1 )

N-6 DNA Methylase

NC_015460
(Gallibacterium anatis UMN179)

3e-113

290) hsdM3
( YP_001053340.1 )

type I modification enzyme

NC_009053
(Actinobacillus pleuropneumoniae L20)

5e-113

291) CCDC5079_2529
( YP_005913952.1 )

type I restriction system adenine methylase

NC_017523
(Mycobacterium tuberculosis CCDC5079)

7e-112

292) infB
( YP_001290624.1 )

translation initiation factor IF-2

NC_009566
(Haemophilus influenzae PittEE)

9e-112

293) ZPR_3435
( YP_003585947.1 )

type I restriction-modification system methyltransferase subunit like protein

NC_014041
(Zunongwangia profunda SMA-87)

4e-111

294) J451_03480
( YP_008222092.1 )

type I restriction endonuclease HindVIIP subunit M

NC_021739
(Mannheimia haemolytica D174)

4e-106

295) D648_15970
( YP_007669109.1 )

type I restriction enzyme HindVIIP M protein

NC_020834
(Mannheimia haemolytica USDA-ARS-USMARC-185)

4e-106

296) N220_08960
( YP_008339233.1 )

type I restriction endonuclease HindVIIP subunit M

NC_021883
(Mannheimia haemolytica USMARC_2286)

4e-106

297) K756_04795
( YP_008123720.1 )

Type I restriction-modification system methyltransferase subunit

NC_021521
(Haemophilus parasuis ZJ0906)

5e-105

298) P700755_000890
( YP_006866619.1 )

type I restriction-modification system, DNA-methyltransferase subunit HdsM

NC_018721
(Psychroflexus torquis ATCC 700755)

5e-103

299) WQG_11890
( YP_007548257.1 )

type I restriction enzyme HindVIIP M protein

NC_020515
(Bibersteinia trehalosi USDA-ARS-USMARC-192)

5e-102

300) MHH_c24290
( YP_007884223.1 )

type I restriction enzyme M protein

NC_021082
(Mannheimia haemolytica M42548)

8e-102

301) TREPR_2283
( YP_004530786.1 )

type I restriction-modification system, M subunit

NC_015578
(Treponema primitia ZAS-2)

2e-99

302) ZPR_4675
( YP_003587171.1 )

type I restriction-modification system DNA methylase

NC_014041
(Zunongwangia profunda SMA-87)

2e-99

303) TOPB45_0145
( YP_004627189.1 )

adenine-specific DNA methyltransferase

NC_015682
(Thermodesulfobacterium geofontis OPB45)

3e-99

304) RB2501_07110
( YP_003194429.1 )

type I restriction-modification system DNA methylase

NC_013222
(Robiginitalea biformata HTCC2501)

2e-98

305) SRU_1098
( YP_445227.1 )

type i restriction enzyme hindviip m protein

NC_007677
(Salinibacter ruber DSM 13855)

3e-98

306) CDHC03_2198
( YP_005139241.1 )

putative type I restriction/modification system DNA methylase

NC_016787
(Corynebacterium diphtheriae HC03)

4e-94

307) MJECL42
( NP_044168.1 )

type I restriction system protein M

NC_001732
(Methanocaldococcus jannaschii DSM 2661)

5e-89

308) TherJR_0899
( YP_003639667.1 )

adenine-specific DNA-methyltransferase

NC_014152
(Thermincola potens JR)

2e-86

309) Slip_1127
( YP_003702469.1 )

adenine-specific DNA-methyltransferase

NC_014220
(Syntrophothermus lipocalidus DSM 12680)

5e-84

310) Metvu_0940
( YP_003247280.1 )

adenine-specific DNA-methyltransferase

NC_013407
(Methanocaldococcus vulcanius M7)

1e-83

311) Mbar_A2666
( YP_306152.1 )

type I restriction-modification system specificity subunit

NC_007355
(Methanosarcina barkeri Fusaro)

1e-83

312) Tmz1t_0004
( YP_002353703.1 )

adenine-specific DNA-methyltransferase

NC_011662
(Thauera sp. MZ1T)

2e-83

313) WEN_00895
( YP_006519311.1 )

hypothetical protein

NC_018149
(Mycoplasma wenyonii Massachusetts)

5e-82

314) Deipr_1486
( YP_004256242.1 )

Site-specific DNA-methyltransferase (adenine-specific)

NC_015161
(Deinococcus proteolyticus MRP)

1e-79

• Sequence Alignments

1) hsdM in NC_007168


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  807 bits (3055),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 504/504 (100%), Positives = 504/504 (100%), Gaps = 0/504 (0%)

Query  1    MATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEED  60
            MATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEED
Sbjct  1    MATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEED  60

Query  61   QDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPA  120
            QDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPA
Sbjct  61   QDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPA  120

Query  121  LDKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180
            LDKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL
Sbjct  121  LDKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240
            VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240

Query  241  RGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNA  300
            RGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNA
Sbjct  241  RGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNA  300

Query  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360
            NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS
Sbjct  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360

Query  361  TQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSW  420
            TQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSW
Sbjct  361  TQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSW  420

Query  421  RGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELS  480
            RGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELS
Sbjct  421  RGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELS  480

Query  481  EQFAKSKELEDQIRKSLEGLGYGV  504
            EQFAKSKELEDQIRKSLEGLGYGV
Sbjct  481  EQFAKSKELEDQIRKSLEGLGYGV  504

2) M013TW_0063 in NC_016928


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  793 bits (3002),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 494/504 (99%), Positives = 499/504 (99%), Gaps = 0/504 (0%)

Query  1    MATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYEELKQDPYADEED  60
            MATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKY ELKQDPYADEED
Sbjct  1    MATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEED  60

Query  61   QDEYLAENIFWVPKEARWQYINDNAKKPEIGQIIDKAMIAIENENESLKGVLPKEYARPA  120
            QDEYLAENIFWVPKEARWQYINDNAKKPEIGQ+IDKAMIAIE+ENESLKGVLPKEYARPA
Sbjct  61   QDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPA  120

Query  121  LDKEKLGDIIDLFTFKVGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180
            LDKEKLGDIIDLFTFK+GDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL
Sbjct  121  LDKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240
            VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240

Query  241  RGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGIPPKGNA  300
            RGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFG+PPKGNA
Sbjct  241  RGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNA  300

Query  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360
            NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS
Sbjct  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360

Query  361  TQIPVCLWFISNNKGQNGKKERENEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHAW  420
            TQIPVCLWFISNNKGQNGKKER NEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYH+W
Sbjct  361  TQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSW  420

Query  421  RGTNDKPYEDIAGFCKVANLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMERITSELS  480
            RGTNDK YEDIAGFCKV NLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKM RITSELS
Sbjct  421  RGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELS  480

Query  481  EQFAKSKELEDQIRKSLEGLGYGV  504
            EQFAKSKELEDQIRKSLEGLGYGV
Sbjct  481  EQFAKSKELEDQIRKSLEGLGYGV  504

3) hsdM in NC_022442


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  793 bits (3002),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 494/504 (99%), Positives = 499/504 (99%), Gaps = 0/504 (0%)

Query  1    MATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYEELKQDPYADEED  60
            MATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKY ELKQDPYADEED
Sbjct  1    MATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEED  60

Query  61   QDEYLAENIFWVPKEARWQYINDNAKKPEIGQIIDKAMIAIENENESLKGVLPKEYARPA  120
            QDEYLAENIFWVPKEARWQYINDNAKKPEIGQ+IDKAMIAIE+ENESLKGVLPKEYARPA
Sbjct  61   QDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPA  120

Query  121  LDKEKLGDIIDLFTFKVGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180
            LDKEKLGDIIDLFTFK+GDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL
Sbjct  121  LDKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240
            VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240

Query  241  RGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGIPPKGNA  300
            RGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFG+PPKGNA
Sbjct  241  RGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNA  300

Query  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360
            NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS
Sbjct  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360

Query  361  TQIPVCLWFISNNKGQNGKKERENEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHAW  420
            TQIPVCLWFISNNKGQNGKKER NEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYH+W
Sbjct  361  TQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSW  420

Query  421  RGTNDKPYEDIAGFCKVANLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMERITSELS  480
            RGTNDK YEDIAGFCKV NLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKM RITSELS
Sbjct  421  RGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELS  480

Query  481  EQFAKSKELEDQIRKSLEGLGYGV  504
            EQFAKSKELEDQIRKSLEGLGYGV
Sbjct  481  EQFAKSKELEDQIRKSLEGLGYGV  504

4) hsdM in NC_017349


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  727 bits (2749),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 443/504 (88%), Positives = 490/504 (98%), Gaps = 0/504 (0%)

Query  1    MATIGFEEKLWQAADKLRGSMDAAEYKNVALGIIFLKYVSDSFEEKYEELLNdeyadeed  60
            MATIGFEEKLWQAADKLRGSMDAAEYKNVALG+IFLKYVSDSFEEKY EL +D YADEED
Sbjct  1    MATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEED  60

Query  61   kdeylaeNIFWVPKESRWQYINDNSKKPEIGQIIDKAMIAIERENESLKGVLPKDYARPA  120
            +DEYLAENIFWVPKE+RWQYINDN+KKPEIGQ+IDKAMIAIE+ENESLKGVLPK+YARPA
Sbjct  61   QDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPA  120

Query  121  LDKEKLGDIIDLFTFKVGDSESKKQDVLGRVYEYFIAKFASAEGKNAGEFYTPASIVKLL  180
            LDKEKLGDIIDLFTFK+GD+ES+KQDVLGRVYEYFIAKFASAEGKNAGEFYTP+SIVKLL
Sbjct  121  LDKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  181  VEMVEPYEGRIYDPCCGSGGMFVQSERFVERHQGRLDNIAVYGQESNPTTWKLAKMNLAI  240
            VEM+EPY GRIYDPCCGSGGMFVQSERFVE+HQGRLD+IA+YGQESNPTTWKLAKMNLAI
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240

Query  241  RGIDNDLGDHHADTFHNDLHKDLKADFILANPPFNASDWGREKLLDDYRWKFGIPPKGNA  300
            RGIDNDLG+++ADTFHNDLHK+LKAD+ILANPPFNASDWG+E+LLDDYRW+FG+PPKGNA
Sbjct  241  RGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNA  300

Query  301  NYAWIEHMISKLAPSGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360
            NYAWIEHMISKLAP+GTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS
Sbjct  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360

Query  361  TQIPVCLWFVTKNKAKNGKNERRGEVLFIDARNIGSMVSRTLKEFSDDEIKDIANVYHSW  420
            TQIPVCLWF+++NK++NGK+ER+ E+LFIDAR+IG MVSRTLKEFSD++I+ +A+ YHSW
Sbjct  361  TQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSW  420

Query  421  RGTNNNQYEDKAGFCKVAKTEEIKNNEYILTPGRYVGLAEVEEDSEPFEQKMERITADLS  480
            RGTN++ YED AGFCKV + EE+KNNEYILTPGRYVGLA+VEED EPFEQKM RIT++LS
Sbjct  421  RGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELS  480

Query  481  EQFAKSKELEDQIRKSLEGLGYGV  504
            EQFAKSKELEDQIRKSLEGLGYGV
Sbjct  481  EQFAKSKELEDQIRKSLEGLGYGV  504

5) hsdM in NC_017338


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  724 bits (2739),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 441/504 (88%), Positives = 489/504 (98%), Gaps = 0/504 (0%)

Query  1    MASIGFEEKLWQAADKLRGSMDAAEYKNVALGIIFLKYVSDSFEEKYEELLNdeyadeed  60
            MA+IGFEEKLWQAADKLRGSMDAAEYKNVALG+IFLKYVSDSFEEKY EL +D YADEED
Sbjct  1    MATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEED  60

Query  61   kdeylaeNIFWVPKESRWQYINDNSKKPEIGQIIDKAMIAIERENESLKGVLPKDYARPA  120
            +DEYLAENIFWVPKE+RWQYINDN+KKPEIGQ+IDKAMIAIE+ENESLKGVLPK+YARPA
Sbjct  61   QDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPA  120

Query  121  LDKEKLGDIIDLFTFKVGDSESKKQDVLGRVYEYFIAKFASAEGKNAGEFYTPASIVKLL  180
            LDKEKLGDIIDLFTFK+GD+ES+KQDVLGRVYEYFIAKFASAEGKNAGEFYTP+SIVKLL
Sbjct  121  LDKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  181  VEMVEPYEGRIYDPCCGSGGMFVQSERFVERHQGRLDNIAVYGQESNPTTWKLAKMNLAI  240
            VEM+EPY GRIYDPCCGSGGMFVQSERFVE+HQGRLD+IA+YGQESNPTTWKLAKMNLAI
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240

Query  241  RGIDNDLGDHHADTFHNDLHKDLKADFILANPPFNASDWGREKLLDDYRWKFGIPPKGNA  300
            RGIDNDLG+++ADTFHNDLHK+LKAD+ILANPPFNASDWG+E+LLDDYRW+FG+PPKGNA
Sbjct  241  RGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNA  300

Query  301  NYAWIEHMISKLAPSGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360
            NYAWIEHMISKLAP+GTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS
Sbjct  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360

Query  361  TQIPVCLWFVTKNKAKNGKNERRGEVLFIDARNIGSMVSRTLKEVSDDEIKDIANVYHSW  420
            TQIPVCLWF+++NK++NGK+ER+ E+LFIDAR+IG MVSRTLKE SD++I+ +A+ YHSW
Sbjct  361  TQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSW  420

Query  421  RGTNNNQYEDKAGFCKVAKTEEIKNNEYILTPGRYVGLAEVEEDSEPFEQKMERITADLS  480
            RGTN++ YED AGFCKV + EE+KNNEYILTPGRYVGLA+VEED EPFEQKM RIT++LS
Sbjct  421  RGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELS  480

Query  481  EQFAKSKELEDQIRKSLEGLGYGV  504
            EQFAKSKELEDQIRKSLEGLGYGV
Sbjct  481  EQFAKSKELEDQIRKSLEGLGYGV  504

6) SAEMRSA15_00450 in NC_017763


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  721 bits (2729),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 438/504 (87%), Positives = 490/504 (98%), Gaps = 0/504 (0%)

Query  1    MATIGFEEKLWQAADKLRGSMDAAEYKNVALGIIFLKYVSDSFEEKYEELLNdeyadeed  60
            MATIGFEEKLWQAADKLRGSMDAAEYKNVALG+IFLKYVSDSFEEKY EL +D YADEED
Sbjct  1    MATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEED  60

Query  61   kdeylaeNIFWVPKESRWQYINDNSKKPEIGQIIDKAMIAIERENESLKGVLPKDYARPA  120
            +DEYLAENIFWVPKE+RWQYINDN+KKPEIGQ+IDKAMIAIE+ENESLKGVLPK+YARPA
Sbjct  61   QDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPA  120

Query  121  LDKEKLGDIIDLFTFKVGDSESKKQDILGRVYEYFIAKFASAEGKNAGEFYTPASIVKLL  180
            LDKEKLGDIIDLFTFK+GD+ES+KQD+LGRVYEYFIAKFASAEGKNAGEFYTP+SIVKLL
Sbjct  121  LDKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  181  VEMIEPYQGRIYDPCCGSGGMFVQSEHFIERHQGRIDDIAVYGQESNPTTWKLAKMNLAI  240
            VEMIEPY+GRIYDPCCGSGGMFVQSE+F+E+HQGR+DDIA+YGQESNPTTWKLAKMNLAI
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240

Query  241  RGIDNNLGDHHADTFHNDLHKDLKADFILANPPFNASDWGREKLQDDYRWKFGIPPKGNA  300
            RGIDN+LG+++ADTFHNDLHK+LKAD+ILANPPFNASDWG+E+L DDYRW+FG+PPKGNA
Sbjct  241  RGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNA  300

Query  301  NYAWIEHMISKLAPSGTAGFVLANGSMSTSGKDELEIRKNLIEQDMVECIVTLPGQLFYS  360
            NYAWIEHMISKLAP+GTAGFVLANGSMSTSGKDELEIRKNLIEQD+VECIVTLPGQLFYS
Sbjct  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360

Query  361  TQIPVCLWFMTKNKAKNGKNERRGEVLFIDARNIGSMVSRTLKEFSDDEIKDIANVYHSW  420
            TQIPVCLWF+++NK++NGK+ER+ E+LFIDAR+IG MVSRTLKEFSD++I+ +A+ YHSW
Sbjct  361  TQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSW  420

Query  421  RGTNNNQYEDKAGFCKVAKTEEIKNNEYILTPGRYVGLAEVEEDSEPFEQKMERITADLS  480
            RGTN++ YED AGFCKV + EE+KNNEYILTPGRYVGLA+VEED EPFEQKM RIT++LS
Sbjct  421  RGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELS  480

Query  481  EQFAKSKELEDQIRKSLEGLGYGV  504
            EQFAKSKELEDQIRKSLEGLGYGV
Sbjct  481  EQFAKSKELEDQIRKSLEGLGYGV  504

7) Clocl_3625 in NC_016627


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  593 bits (2239),  Expect = 1e-170, Method: Compositional matrix adjust.
 Identities = 329/503 (66%), Positives = 418/503 (84%), Gaps = 8/503 (1%)

Query  4    VNLGFENNLWEMADKLRGNIEASEYKHVVLGLIFLKYISDAFEERYNELVAEGEGFEEDI  63
              +GFE++LW+ ADKLRG+++A+EYK+V LGLIFLKY+SD+FEE+Y+EL  +  + EED 
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  64   DAYTEVNVFYVPKEARWDYIKANAKQPTIGQIIDEAMIAIEKENASLKGVLPKNYARPEI  123
            D Y   N+F VPKEARW+YI+ NAK+P IGQ+ID AMIAIEKEN SLKGVLPK+YARP +
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  124  DKTKLGELIDLFSFKVGDKEARAQDVLGRVYEYFLGKFGSSEG----EFYTPPSIVKLLV  179
            DK KLG++IDLF+FK+GD E+R QDVLGRVYEYF++KF+S+EG    EFYTP+SIVKLLV
Sbjct  122  DKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  180  EMIEPYKGRVYDPCCGSGGMFVQSQRFVEEHSGRKDDIHIFGQEYTATTWRLCKMNLAIR  239
            EMIEPYKGR+YDPCCGSGGMFVQS+RFVE H GR DDI I+GQE  +TTW+L KMNLAIR
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  240  GIDGNLGERDADTFSNDLHKMLKADYILANPPFNIKDWGANRLVDDVRWKYGMPPAGNAN  299
            GID +LGER+ADTF NDLHK LKADYILANPPFN  DWG +RL+DD RW++G+PP GNAN
Sbjct  242  GIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNAN  301

Query  300  YAWIQHIISKLSPNGVAGFVMANGAMSTNTTSEAEIRKNIIEDKLVDCIITLPPNLFYNV  359
            YAWI+H+ISKL+PNG AGFV+ANG+MST+   E EIRKN+IE+ LV+CI+TLP +LFY+ 
Sbjct  302  YAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYST  361

Query  360  TIPACLWFLTRNKKSDG-RDRSNEILFIDARKMGTMIDRKHRELDYETEIKYIADTYHRW  418
             IP CLWF++ NK  +G ++R NEILFIDAR +G M+ R  +E+  + +I+ +A+TYH W
Sbjct  362  QIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFS-DEDIQKVAQTYHSW  420

Query  419  KKGEG--YEDIKGFCKSATLDEVRSHEYILTPGRYVGIEEKADDGEPFDEKMTRLTGELA  476
            +  ++  YEDI GFCK   L+EV+++EYILTPGRYVG+ +  +D EPF++KM R+T+EL+
Sbjct  421  RGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELS  480

Query  477  EMFAKRKSLEDEIRKRLGAIGYD  499
            E FAK K LED+IRK L ++GY+
Sbjct  481  EQFAKSKELEDQIRKSLEGLGYG  503

8) HM1_3075 in NC_010337


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  588 bits (2221),  Expect = 3e-169, Method: Compositional matrix adjust.
 Identities = 320/489 (66%), Positives = 415/489 (85%), Gaps = 6/489 (1%)

Query  2    ADKLRGNIEASEYKHVVLGLIFLKYISDSFEEKYNELVAEGEGFEEDIDAYMEDNIFFVP  61
            ADKLRG+++A+EYK+V LGLIFLKY+SDSFEEKY+EL  +  + EED D Y+ +NIF VP
Sbjct  14   ADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDEYLAENIFWVP  73

Query  62   PEARWDYIKEQAKQPTIGQIIDDAMVAIEKNNPSLKGVLPKNYARPELDKTKLGELIDLF  121
             EARW+YI+++AK+P IGQ+ID AM+AIEK+N SLKGVLPK+YARP LDK KLG++IDLF
Sbjct  74   KEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEKLGDIIDLF  133

Query  122  SFKVGDKEAKAKDVLGRVYEYFLGKFGSSEG----EFYTPPSIVKLLVEMIEPYKGRIYD  177
            +FK+GD E++ +DVLGRVYEYF++KF+S+EG    EFYTP+SIVKLLVEMIEPYKGRIYD
Sbjct  134  TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYD  193

Query  178  PCCGSGGMFVQSQRFVEEHQGRRDDIHVYGQEYTATTWRLCKMNLSIRGIDANLGERDDD  237
            PCCGSGGMFVQS+RFVE HQGR DDI +YGQE  +TTW+L KMNL+IRGID +LGER+ D
Sbjct  194  PCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGIDNDLGERNAD  253

Query  238  TFANDLHKSLRADYILANPPFNIKDWGANRLANDARWKYGLPPANNANYAWIQHIISKLS  297
            TF NDLHK+L+ADYILANPPFN  DWG +RL +D RW++G+PP  NANYAWI+H+ISKL+
Sbjct  254  TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWIEHMISKLA  313

Query  298  PSGVAGFVMANGSMLTNTSNESEIRKNIIEAKLVDCIVTMPSNLFYTVTIPVCLWFLSKN  357
            P+G AGFV+ANGSM T+  +E EIRKN+IE  LV+CIVT+P++LFY+  IPVCLWF+S+N
Sbjct  314  PNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNN  373

Query  358  KMPKGLRDRSDEILFIDARKMGYMEDRKHRVLSEEDIQRIAQTYRNWKKGEG--YEDVKG  415
            K  +G ++R +EILFIDAR +G M  R  + +S+EDIQ++AQTY++W+  ++  YED+ G
Sbjct  374  KGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGTNDKYYEDIAG  433

Query  416  FCKSATLAEVREHEYILTPGRYVGVEEVEADTEAFDEKMSRLTGELAEMFAKSRHLEEEI  475
            FCK   L EV+++EYILTPGRYVG+ +VE D E+F++KM R+T+EL+E FAKS++LE++I
Sbjct  434  FCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQI  493

Query  476  RRRLGAIGY  484
            R+ L ++GY
Sbjct  494  RKSLEGLGY  502

9) Dacet_2555 in NC_013943


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  587 bits (2216),  Expect = 7e-169, Method: Compositional matrix adjust.
 Identities = 316/513 (62%), Positives = 416/513 (82%), Gaps = 11/513 (2%)

Query  8    ANIGFEDKLWQTADKLRGNMDASEYKHVVLGLIFLKYISDSFQAKYDELLATQETDYTDP  67
            A IGFE+KLWQ+ADKLRG+MDA+EYK+V LGLIFLKY+SDSF+ KY EL   ++  Y+D 
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKEL---KQDPYADE  58

Query  68   EDRDEYMSDNVFWVPAEARWESLIAKAKTPEIGKVLDDAMIAIEKENKTLKNILPKTYSR  127
            ED+DEY+++N+FWVP EARW+ +  +AK PEIG+++D AMIAIEKEN +LK +LPK Y+R
Sbjct  59   EDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYAR  118

Query  128  PEIDKSRLGELLDIIGSIPLIDKAQSSKDLLGRVYEYFIGMFASKEGRSGGEFYTPQSVV  187
            P +DK +LG+++D++ ++ L D     +D+LGRVYEYFI+ FAS EG+++GEFYTP S+V
Sbjct  119  PALDKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIV  177

Query  188  QLLVEMIEPYKGRVYDPCCGSGGMFVQSEKFAEEHGGRLRDISVYGQEYNATTWRLAKMN  247
            +LLVEMIEPYKGR+YDPCCGSGGMFVQSE+F E H GRL DI++YGQE N+TTW+LAKMN
Sbjct  178  KLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMN  237

Query  248  LAIRGIEANLGAEWADTFTNDLHKDLKSDFILANPPFNMSDWGGNKLKNDVRWKYGTPPD  307
            LAIRGI+ +LG   ADTF NDLHK+LK+D+ILANPPFN SDWG ++L +D RW++G PP 
Sbjct  238  LAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPK  297

Query  308  NNANYAWIQHFIHHLAPNGVAGFVLANGSMSSNTSGEGEIRKNIIEADLVDCMIALPGQL  367
             NANYAWI+H I  LAPNG AGFVLANGSMS++  +E EIRKN+IE DLV+C+++LPGQL
Sbjct  298  GNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQL  357

Query  368  FYTTQIPVCLWFLARNKGKNGHRERKGETLFIDARKMGRLEDRVHRVLVPEDIQKIASTY  427
            FY+TQIPVCLWF++ NKG+NG +ERK E LFIDAR +G++  R  + +  EDIQK+A TY
Sbjct  358  FYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTY  417

Query  428  HAWRSNPDVIASEGKQSYEDVAGFCKSVTLDTIKEHDYVLTPGRYVGAEEVEDDGEPFDE  487
            H+WR+  D       + YED+AGFCK V L+ +K+++Y+LTPGRYVG  +VE+D EPF++
Sbjct  418  HSWRGTND-------KYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQ  470

Query  488  KMKRLSTQLYSQMTEGEKLDAVIKENLAKLGYG  520
            KMKR++++L  Q + +  L+  I+ +L  LGYG
Sbjct  471  KMKRITSELSEQFAKSKELEDQIRKSLEGLGYG  503

10) hsdM in NC_015697


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  586 bits (2213),  Expect = 1e-168, Method: Compositional matrix adjust.
 Identities = 314/503 (63%), Positives = 421/503 (84%), Gaps = 2/503 (0%)

Query  10   LSIEDKLWKTADALRGSMDASEYRNVVLGLIFLKYVSDSFETRHNELLKSDYPEDAEDPD  69
            +++E+KLW++AD LRGSMDA+EY+NV LGLIFLKYVSDSFE + +EL +  Y+++ ED D
Sbjct  4    IGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADE-EDQD  62

Query  70   MYLSENIFWVPKEARWELIQQSAKTPQIGEIIDSAMDAIEKSNDSLRGVLSKNYASPDLD  129
             YL+ENIFWVPKEARW+ I+++AK P+IG++ID AM AIEK N+SL+GVL+K+YA P LD
Sbjct  63   EYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALD  122

Query  130  KARLGEVVDLISDISLGDKHAKQSDILGRVYEYFLNEFASQEGKKGGEFYTPRSIVRTLV  189
            K +LG+++DL++ + LGD ++++ D+LGRVYEYF+  FAS EGK++GEFYTP SIV+ LV
Sbjct  123  KEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  190  EMIEPYKGRIYDPCCGSGGMFVQSDKFVQEHQGKIGDLSVYGEESNPTTWKLAKMNLAIR  249
            EMIEPYKGRIYDPCCGSGGMFVQS++FV+ HQG+++D+++YG+ESNPTTWKLAKMNLAIR
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  250  GIDNNLGPHQGDTFTNDLHKGERFDFILANPPFNVKNWNGDKLREDARWQYGVPPVGNAN  309
            GIDN+LG +++DTF NDLHKG + D+ILANPPFN  +W  ++L +D RWQ+GVPP GNAN
Sbjct  242  GIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNAN  301

Query  310  YAWIEHIISKLAPDGKAGFVLANGALSTSTTAEHDIRKAILEDDKIDAIVALPDKMFYST  369
            YAWIEH+ISKLAP+G AGFVLANG++STS   E +IRK ++E+D ++ IV+LP+++FYST
Sbjct  302  YAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYST  361

Query  370  GIPVSLWFVDMNKESENERDRKGETLFIDARDLGEMIDRTHRAFSKEDIKKVADTYHAYR  429
             IPV LWF+  NK  +  ++RK E LFIDAR++G+M+ RT + FS EDI+KVA+TYH+ R
Sbjct  362  QIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWR  421

Query  430  GTNDQEYKDVPGFCKVAKLDEIAKNDYVLTPGRYVGLAKQEDDGEPYEVKMARLTGELKK  489
            GTND+ Y D++GFCKV +L+E+ +N+Y+LTPGRYVGLA  E+D EP+E KM R+T+EL  
Sbjct  422  GTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSE  481

Query  490  QFEESNKLQAEIKDVLKELGYEI  512
            QF  S+ L+ +I+  L  LGY +
Sbjct  482  QFAKSKELEDQIRKSLEGLGYGV  504

11) LRI_1103 in NC_021494


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  585 bits (2209),  Expect = 3e-168, Method: Compositional matrix adjust.
 Identities = 321/503 (64%), Positives = 418/503 (84%), Gaps = 2/503 (0%)

Query  8    LNIEDKLWKAADALRGSMDASEYRNVVLGLIFLKYASDSFDERRQELLKTEYPEDAEDPD  67
            + +E+KLW+AAD LRGSMDA+EY+NV LGLIFLKY SDSF+E+ +EL +  Y+++ ED D
Sbjct  4    IGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADE-EDQD  62

Query  68   MYLENNIFWVPQEARWSKIEHAAKTPQIGEVIDDAMTAIEKSNDSFRGILSKNYASPDLD  127
             YL +NIFWVP+EARW  I++ AK P+IG++ID AM AIEK N+S++G+L+K+YA P LD
Sbjct  63   EYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALD  122

Query  128  KTRLGEVVDLISDIKVGTKESTDKDVLGRVYEYFLNEFASQEGKHGGEFYTPRSIVKILV  187
            K +LG+++DL++ +K+G  ES  +DVLGRVYEYF+  FAS EGK++GEFYTP SIVK+LV
Sbjct  123  KEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  188  EMIEPYKGRIYDPCCGSGGMFVQSEEFVRHHQGELKDLHVFGEESNPTTWKLAKMNLAIR  247
            EMIEPYKGRIYDPCCGSGGMFVQSE FV  HQG L D+ ++G+ESNPTTWKLAKMNLAIR
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  248  GIDSDLGPHQGDTFTNDLHKGVRFNYILANPPFNIKNWGGEKLQEDARWKYGVPPTGNAN  307
            GID+DLG +++DTF NDLHKG++ +YILANPPFN  +WG E+L +D RW++GVPP GNAN
Sbjct  242  GIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNAN  301

Query  308  YAWIEHIISKLAPDGKAGFVLANGALSTSNKEELAIRKAILEDDKIDAIVALPEKMFYST  367
            YAWIEH+ISKLAP+G AGFVLANG++STS K+EL IRK ++E+D ++ IV+LP ++FYST
Sbjct  302  YAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYST  361

Query  368  GIPVSLWFVDMNKESEDERSRKGETLFIDARNLGEMIDRTHRAFNDDDIKKVADTYHAYR  427
             IPV LWF+  NK  ++ + RK E LFIDAR++G+M+ RT + F+D+DI+KVA+TYH+ R
Sbjct  362  QIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWR  421

Query  428  GTNDQEYKDVAGFCKVAKLDEIAKNDYVLTPGRYVGLAKQEDDGEPYEVKMKRLTSELKE  487
            GTND+ Y D+AGFCKV +L+E+ +N+Y+LTPGRYVGLA  E+D EP+E KMKR+TSEL E
Sbjct  422  GTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSE  481

Query  488  QFEESNKLQAQIKDVLKELGYEI  510
            QF  S+ L+ QI+  L  LGY +
Sbjct  482  QFAKSKELEDQIRKSLEGLGYGV  504

12) Lreu_0869 in NC_009513


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  581 bits (2194),  Expect = 4e-167, Method: Compositional matrix adjust.
 Identities = 319/503 (64%), Positives = 418/503 (84%), Gaps = 2/503 (0%)

Query  8    LNIEDKLWKAADALRGSMDASEYRNVVLGLIFLKYASDSFEERRQELLKTEYPEDAEDPD  67
            + +E+KLW+AAD LRGSMDA+EY+NV LGLIFLKY SDSFEE+ +EL +  Y+++ ED D
Sbjct  4    IGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADE-EDQD  62

Query  68   MYLENNIFWVPQEARWAKIEHAAKTPQIGEVIDDAMTAIEKSNDSFRGILSKNYASPDLD  127
             YL +NIFWVP+EARW  I++ AK P+IG++ID AM AIEK N+S++G+L+K+YA P LD
Sbjct  63   EYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALD  122

Query  128  KTRLGEVVDLISDIKVGTKESTDKDVLGRVYEYFLNEFASQEGKHGGEFYTPRSIVKILV  187
            K +LG+++DL++ +K+G  ES  +DVLGRVYEYF+  FAS EGK++GEFYTP SIVK+LV
Sbjct  123  KEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  188  EMIEPYKGRIYDPCCGSGGMFVQSEEFVRHHQGELKDLHVFGEESNPTTWKLAKMNLAIR  247
            EMIEPYKGRIYDPCCGSGGMFVQSE FV  HQG L D+ ++G+ESNPTTWKLAKMNLAIR
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  248  GIDSDLGPHQGDTFTNDLHKGVRFNYILANPPFNIKNWGGEKLQEDARWKYGVPPTGNAN  307
            GID+DLG +++DTF NDLHKG++ +YILANPPFN  +WG E+L +D RW++GVPP GNAN
Sbjct  242  GIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNAN  301

Query  308  YAWIEHIISKLAPDGKAGFVLANGALSTSNKEEFAIRKAILEDDKIDAIVALPEKMFYST  367
            YAWIEH+ISKLAP+G AGFVLANG++STS K+E+ IRK ++E+D ++ IV+LP ++FYST
Sbjct  302  YAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYST  361

Query  368  GIPVSLWFVDMNKESEDERSRKGETLFIDARNLGEMIDRTHRAFNDDDIKKVADTYHAYR  427
             IPV LWF+  NK  ++ + RK E LFIDAR++G+M+ RT + F+D+DI+KVA+TYH+ R
Sbjct  362  QIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWR  421

Query  428  GTNDQEYKDVAGFCKIAKLDEIAKNDYVLTPGRYVGLAKQEDDGESYEVKMKRLTSELKE  487
            GTND+ Y D+AGFCK+ +L+E+ +N+Y+LTPGRYVGLA  E+D E++E KMKR+TSEL E
Sbjct  422  GTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSE  481

Query  488  QFEESNKLQAQIKDVLKELGYEI  510
            QF  S+ L+ QI+  L  LGY +
Sbjct  482  QFAKSKELEDQIRKSLEGLGYGV  504

13) LAR_0816 in NC_010609


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  581 bits (2194),  Expect = 4e-167, Method: Compositional matrix adjust.
 Identities = 319/503 (64%), Positives = 418/503 (84%), Gaps = 2/503 (0%)

Query  8    LNIEDKLWKAADALRGSMDASEYRNVVLGLIFLKYASDSFEERRQELLKTEYPEDAEDPD  67
            + +E+KLW+AAD LRGSMDA+EY+NV LGLIFLKY SDSFEE+ +EL +  Y+++ ED D
Sbjct  4    IGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADE-EDQD  62

Query  68   MYLENNIFWVPQEARWAKIEHAAKTPQIGEVIDDAMTAIEKSNDSFRGILSKNYASPDLD  127
             YL +NIFWVP+EARW  I++ AK P+IG++ID AM AIEK N+S++G+L+K+YA P LD
Sbjct  63   EYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALD  122

Query  128  KTRLGEVVDLISDIKVGTKESTDKDVLGRVYEYFLNEFASQEGKHGGEFYTPRSIVKILV  187
            K +LG+++DL++ +K+G  ES  +DVLGRVYEYF+  FAS EGK++GEFYTP SIVK+LV
Sbjct  123  KEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  188  EMIEPYKGRIYDPCCGSGGMFVQSEEFVRHHQGELKDLHVFGEESNPTTWKLAKMNLAIR  247
            EMIEPYKGRIYDPCCGSGGMFVQSE FV  HQG L D+ ++G+ESNPTTWKLAKMNLAIR
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  248  GIDSDLGPHQGDTFTNDLHKGVRFNYILANPPFNIKNWGGEKLQEDARWKYGVPPTGNAN  307
            GID+DLG +++DTF NDLHKG++ +YILANPPFN  +WG E+L +D RW++GVPP GNAN
Sbjct  242  GIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNAN  301

Query  308  YAWIEHIISKLAPDGKAGFVLANGALSTSNKEEFAIRKAILEDDKIDAIVALPEKMFYST  367
            YAWIEH+ISKLAP+G AGFVLANG++STS K+E+ IRK ++E+D ++ IV+LP ++FYST
Sbjct  302  YAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYST  361

Query  368  GIPVSLWFVDMNKESEDERSRKGETLFIDARNLGEMIDRTHRAFNDDDIKKVADTYHAYR  427
             IPV LWF+  NK  ++ + RK E LFIDAR++G+M+ RT + F+D+DI+KVA+TYH+ R
Sbjct  362  QIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWR  421

Query  428  GTNDQEYKDVAGFCKIAKLDEIAKNDYVLTPGRYVGLAKQEDDGESYEVKMKRLTSELKE  487
            GTND+ Y D+AGFCK+ +L+E+ +N+Y+LTPGRYVGLA  E+D E++E KMKR+TSEL E
Sbjct  422  GTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSE  481

Query  488  QFEESNKLQAQIKDVLKELGYEI  510
            QF  S+ L+ QI+  L  LGY +
Sbjct  482  QFAKSKELEDQIRKSLEGLGYGV  504

14) Cylst_5223 in NC_019757


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  574 bits (2168),  Expect = 5e-165, Method: Compositional matrix adjust.
 Identities = 328/504 (66%), Positives = 428/504 (85%), Gaps = 1/504 (0%)

Query  37   SKLGFEEKLWQTADKLRGHLDAAEYKHVVLGLIFLKYISDAFNELYEKLSQDEYAEPEDR  96
            + +GFEEKLWQ+ADKLRG +DAAEYK+V LGLIFLKY+SD+F+E Y  L QD YA+ ED+
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  97   DEYSAENIFYVPKVARWLHFQSHAKNPLIGQLIDEGMDAIEKENASLKGVLPKEYGKPAL  156
            DEY AENIF VPK ARW  ++ +AK+P IGQLID +M AIEKEN SLKGVLPKEY++PAL
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  157  DKRLLGELIDLIGTIGLGDAESRKNDVLGRVYEYFLGQFANAEGKKGGQFYTPPAVVKVL  216
            DK  LG++IDL+ T+ LGD+ESRK+DVLGRVYEYF+++FA+AEGK++G+FYTP+++VK+L
Sbjct  122  DKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  217  VEMLEPYKGRVYDPCCGSGGMFVQSEKFIKAHEGKIGDISIYGQESNPTTWKLCKINLAI  276
            VEM+EPYKGR+YDPCCGSGGMFVQSE+F+  H+G+++DI+IYGQESNPTTWKL K+NLAI
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240

Query  277  RGIDGNLGAKNADSFRNDLHKDLKADYILANPPFNMSDWGGEGLREDGRWIYGTPSAGNA  336
            RGID +LG +NAD+F+NDLHK+LKADYILANPPFN SDWG E L +D RW +G P+ GNA
Sbjct  241  RGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNA  300

Query  337  NYAWIQHIISHLAPHGYAGFVLANGSMSSNQSGEGEIRKALIDADLVDCMVALPGQLFYN  396
            NYAWI+H+IS LAP+G AGFVLANGSMS++  +E EIRK LI+ DLV+C+V+LPGQLFY+
Sbjct  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360

Query  397  TQIPACLWFLTRNKSGGKFRKRRGETLFIDGRKLGVLIDRVHRDLTEEEIKRIAQTYHNW  456
            TQIP CLWF++ NK+    + R+ E LFID+R +G ++ R  +++++E+I+++AQTYH+W
Sbjct  361  TQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSW  420

Query  457  RGTGKEKYIDVPGFCKGASFEEIQGHGYVLTPGRYVGAeeveeddepfeekmeRLTQKLE  516
            RGT    Y D++GFCK  ++EE++ + Y+LTPGRYVG  +VEED+EPFE+KM R+T  L 
Sbjct  421  RGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELS  480

Query  517  EQFRKSADLERKIKQNLRGLGYGI  540
            EQF KS +LE +I+++L GLGYG+
Sbjct  481  EQFAKSKELEDQIRKSLEGLGYGV  504

15) Mhun_2789 in NC_007796


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  574 bits (2168),  Expect = 5e-165, Method: Compositional matrix adjust.
 Identities = 321/519 (62%), Positives = 415/519 (80%), Gaps = 17/519 (3%)

Query  14   NLGFEATLWAAADKLRNNMDAAEYKHVVLGLIFLKYLSDAFEEKHSSLEQAYSDPQSTWY  73
             +GFE  LW AADKLR +MDAAEYK+V LGLIFLKY+SD+FEEK   L Q          
Sbjct  3    TIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQD---------  53

Query  74   IAEPEVRYGVIEDPDEYRSENIFWIPKEARWSYIQQNAKRPEIGKIVDDAMYAIERDNAV  133
                   Y+  ED DEY +ENIFW+PKEARW YI++NAK+PEIG+++D AM AIE++N  
Sbjct  54   ------PYADEEDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENES  107

Query  134  LKNILPKEYARPGLDKEKLGELIDLIGTLNLSDSENRSKDIIGRVYEYFLSEFASAEGKN  193
            LK +LPKEYARP+LDKEKLG++IDL+ T++L+D+E+R +D++GRVYEYF++ FASAEGKN
Sbjct  108  LKGVLPKEYARPALDKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKN  166

Query  194  GGQFYTPRCVVQTLVAMISPFKGRVYDPCCGSGGMFVQSEKFVEAHGGRIGDISIYGQES  253
            +G+FYTP  +V+ LV MI P+KGR+YDPCCGSGGMFVQSE+FVE H GR++DI+IYGQES
Sbjct  167  AGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQES  226

Query  254  NPTTWKLAKMNLAIRGIDHDLGAEHADSFRRDLHATLKADYILANPPFNMKDWGGENLKD  313
            NPTTWKLAKMNLAIRGID+DLG  +AD+F+ DLH  LKADYILANPPFN  DWG E L D
Sbjct  227  NPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLD  286

Query  314  DVRWRYGIPPTGNANYAWIQHFIHHLSPSGIAGFVLANGSMSSNQSGEGEIRKNLLEADL  373
            D RW++G+PP GNANYAWI+H I  L+P+G AGFVLANGSMS++  +E EIRKNL+E DL
Sbjct  287  DYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDL  346

Query  374  VDCMVALPGQLFYSTQIPACLWFVArnrsngrfrdrrgEVLFIDARKMGVMRDRTHRELT  433
            V+C+V+LPGQLFYSTQIP CLWF++ N+++   ++R+ E+LFIDAR +G M  RT +E++
Sbjct  347  VECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFS  406

Query  434  DEDIERIAGTYHAWRGDASAGEYEDVPGFCASATLEEIAKHGHVLTPGRYVGAEDAEDDG  493
            DEDI+++A TYH+WRG ++   YED++GFC    LEE+ ++  +LTPGRYVG  D E+D 
Sbjct  407  DEDIQKVAQTYHSWRG-TNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDE  465

Query  494  EPFAEKMTRLTKQLSEQMEDGARLDEEIKKNLGGLGYTI  532
            EPF +KM R+T +LSEQ   +  L+++I+K+L GLGY +
Sbjct  466  EPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

16) Cyan7822_0692 in NC_014501


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  574 bits (2166),  Expect = 6e-165, Method: Compositional matrix adjust.
 Identities = 321/512 (63%), Positives = 421/512 (83%), Gaps = 9/512 (1%)

Query  15   NTVKLEDKLWKAADKLRGHLDAAEYKHVVLGLIFLKYISDAFGELYDKLSTDEYADPEDK  74
             T+ +E+KLW+AADKLRG +DAAEYK+V LGLIFLKY+SD+F E Y  L  D YAD ED+
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  75   DEYTAEHIFWVPVEARWSHLQAKAKTPDIGKFVDEAMEAIEKENPSLKGVLPKDYGKPAL  134
            DEY AE+IFWVP EARW  ++ +AK P+IG+++D AM AIEKEN SLKGVLPK+Y++PAL
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  135  DKRLLGELIDLIGTIGLGDAQNRSQDILGRVYEYFLGQFASAEGKKGGQFYTPRCVVELL  194
            DK  LG++IDL+ T+ LGD+++R QD+LGRVYEYF+++FASAEGK++G+FYTP  +V LL
Sbjct  122  DKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  195  VDMLEPYKGRVYDPCCGSGGMFVQSEKFVEAHGGKIGDISIYGQESNPTTWKLCKMNLAI  254
            V+M+EPYKGR+YDPCCGSGGMFVQSE+FVE H G+++DI+IYGQESNPTTWKL KMNLAI
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240

Query  255  RGIDGNLGAKNADSFRNDLHKELKADYILANPPFNVSDWGGQHLREDSRWIYGTPPVGNA  314
            RGID +LG +NAD+F+NDLHK LKADYILANPPFN SDWG ++L +D RW +G PP GNA
Sbjct  241  RGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNA  300

Query  315  NYAWIQQIITHLAPNGIAGFVLANGSMSSNQSGEGEIRKALVEADLVDCMVALPGQLFYN  374
            NYAWI+++I+ LAPNG AGFVLANGSMS++  +E EIRK L+E DLV+C+V+LPGQLFY+
Sbjct  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360

Query  375  TQIPACLWFLTRNKGQSPLTLLNKGGMRQRKGETLFIDARKLGVLIDRVHRELTSEEITR  434
            TQIP CLWF++ NKGQ+        G ++RK E LFIDAR +G ++ R  +E++ E+I +
Sbjct  361  TQIPVCLWFISNNKGQN--------GKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQK  412

Query  435  IAETYHNWRGSGKGEYEDVPGFCKSAALEDIRGHGYVLTPGRYVGAeevddddepfeeKM  494
            +A+TYH+WRG+    YED++GFCK   LE+++ + Y+LTPGRYVG  +V++D+EPFE+KM
Sbjct  413  VAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKM  472

Query  495  ERLTKLLEEQFSESARLENEICQNLREFGYEL  526
             R+T  L EQF+ S  LE++I ++L  +GY +
Sbjct  473  KRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

17) LFE_0347 in NC_017094


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  573 bits (2162),  Expect = 1e-164, Method: Compositional matrix adjust.
 Identities = 330/512 (65%), Positives = 418/512 (82%), Gaps = 9/512 (1%)

Query  12   SPLGLETKLWQAADKLRNNMDAAEYKHVVLGLLFLKYVSDSFEEHHAKLTSEISQGANPE  71
            + +G+E KLWQAADKLR +MDAAEYK+V LGL+FLKYVSDSFEE    L  +    A+ E
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPY--ADEE  59

Query  72   DPDEYRADNVFWVPKEARWSVLQSNAKRPEIGKVIDDAMVAIERDNKSLKAVLPKDFARP  131
            D DEY A+N+FWVPKEARW  ++ NAK+PEIG++ID AM+AIE++N SLK+VLPK++ARP
Sbjct  60   DQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARP  119

Query  132  GLDKQRLGELIDLVGTIGLGDKEHRSRDMLGRVYEYFLSRFASAEGKKGGQFYTPRSVVR  191
            +LDK++LG++IDL  T+ LGD E R +D+LGRVYEYF+++FASAEGK++G+FYTP S+V+
Sbjct  120  ALDKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVK  178

Query  192  VLVEMLAPYKGRVYDPCCGSGGMFVQSEKFIEVHGGRIGDISIYGQESNHTTWKLAAMNL  251
            +LVEM+ PYKGR+YDPCCGSGGMFVQSE+F+E H GR++DI+IYGQESN TTWKLA MNL
Sbjct  179  LLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNL  238

Query  252  AIRGIAANLGKENADSFHRDLHPDLKADYILANPPFNSSDWGGDRLREDKRWVYGVPPGG  311
            AIRGI  +LG  NAD+FH DLH +LKADYILANPPFN+SDWG +RL +D RW +GVPP G
Sbjct  239  AIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKG  298

Query  312  NANFGWVQHFISHLAPNGVAGFVLANGSLSSNQSGEGEIRKNIVEADVVDCIVAMPGQLF  371
            NAN++W++H IS LAPNG AGFVLANGS+S++  +E EIRKN++E D+V+CIV++PGQLF
Sbjct  299  NANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLF  358

Query  372  YSTQIPVSLWFVSRNKKNGKGQEGKPLRDRSGEILFIDARKLGFMADRTHRDLSDEDIAK  431
            YSTQIPV LWF+S    N KGQ+GK  ++R  EILFIDAR +G M  RT +++SDEDI K
Sbjct  359  YSTQIPVCLWFIS----NNKGQNGK--KERKNEILFIDAREIGHMVSRTLKEFSDEDIQK  412

Query  432  IAGTYHHWRGDGAGQYENIPGFCKKATLEEVRTHGHVLTPGRYVGAeevegdgepfeeKM  491
            +A TYH WRG     YE+I+GFCK   LEEV+ +  +LTPGRYVG  +VE D EPFE+KM
Sbjct  413  VAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKM  472

Query  492  KRLTAQLDEQFKESARLEAEIRSNLSKLGYGL  523
            KR+T++L EQF  S  LE +IR +L  LGYG+
Sbjct  473  KRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

18) hsdM2 in NC_016894


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  568 bits (2143),  Expect = 4e-163, Method: Compositional matrix adjust.
 Identities = 322/503 (65%), Positives = 417/503 (83%), Gaps = 5/503 (0%)

Query  5    GNIGFEETLWKAADKLRGSMDASEYKHVVLGLIFLKYISDKFETKYNELVTEGEGFEEDR  64
            + IGFEE LW+AADKLRGSMDA+EYK+V LGLIFLKY+SD FE KY+EL  +  + EED+
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  65   DEYASENIFWVPKEARWTFIMDNAKDIKIGQYIDDAMILIEKENTSLKGVLDKRYARPEI  124
            DEY +ENIFWVPKEARW +I DNAK   IGQ ID AMI IEKEN SLKGVL K YARP +
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  125  DKRRLGELIDLISTIKLHDSGEK--DLLGRVYEYFLGQFASVEGKGGGEFYTPTSIVKTL  182
            DK +LG++IDL+ T+KL D+  +  D+LGRVYEYF+++FAS EGK +GEFYTP+SIVK L
Sbjct  122  DKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  183  VEMIEPYQGRVYDPCCGSGGMFVQSEKFVEDHQGKIENLSIYGQEMNSTTWKLCKMNLAI  242
            VEMIEPY+GR+YDPCCGSGGMFVQSE+FVE HQG++++++IYGQE N+TTWKL KMNLAI
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240

Query  243  RGLDANLGSHHDDTFHNDLHKTLKADFILANPPFNISDWGGGHLTDDVRWKFGMPPTGNA  302
            RG+D +LG ++ DTFHNDLHK LKAD+ILANPPFN SDWG  +L DD RW+FG+PP GNA
Sbjct  241  RGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNA  300

Query  303  NYAWLQHMVYHLAPNGSAGIVLANGSLSSNTSNEGEIRKNLLEGDLVDAIVALPDKLFYS  362
            NYAW++HM+  LAPNG+AG+VLANGS+S++  +E EIRKNL+E DLV+ IV+LP++LFYS
Sbjct  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360

Query  363  TGIPVSLWILNRNKATNPQFRSRYHEVLFIDARQLGEMIDRRHKVLKDDDVATIAAAYHA  422
            T IPV LW+++ NK+ N + + R +E+LFIDAR++G+M+ R  K + D+D+  +A +YH+
Sbjct  361  TQIPVCLWFISNNKGQNGK-KERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHS  419

Query  423  WRNLDGA-YEDVKGFCKAAKLAEIREHEYVLTPGRYVGIEDAIDDGIPFEEKMENMTAEL  481
            WR  ++  YED+ GFCK  +L E++++EY+LTPGRYVG+ D  +D  PFE+KM  +T+EL
Sbjct  420  WRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSEL  479

Query  482  AELFAKSRHLEDEIRKNLGGVGY  504
            +E FAKS++LED+IRK+L G+GY
Sbjct  480  SEQFAKSKELEDQIRKSLEGLGY  502

19) hsdM in NC_015634


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  567 bits (2141),  Expect = 6e-163, Method: Compositional matrix adjust.
 Identities = 328/504 (66%), Positives = 423/504 (84%), Gaps = 5/504 (0%)

Query  5    AKIGFEETLWKSADKLRGSMDASEYKHVVLGLIFLKYISDKFEMKYNelveegegfeedr  64
            A IGFEE LW++ADKLRGSMDA+EYK+V LGLIFLKY+SD FE KY+EL ++  + EED+
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  65   deYTAENIFWVPKQSRWSFIKDRAKDPKIGQYIDEAMIEIEKENPSLRGVLDKRYARPEI  124
            DEY AENIFWVPK++RW +I+D AK P IGQ ID AMI IEKEN SL+GVL K YARP +
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  125  DKRRLGELIDLISTIKLHSKQEK--DLLGRVYEYFLGKFASAEGKGGGEFYTPQSVVKTL  182
            DK +LG++IDL+ T+KL   + +  D+LGRVYEYF++KFASAEGK +GEFYTP S+VK L
Sbjct  122  DKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  183  VEMTEPYEGRIYDPCCGSGGMFVQSEKFVERHQGKIDNLSIYGQELNSTTWKLCKMNLAI  242
            VEM EPY GRIYDPCCGSGGMFVQSE+FVE+HQG++D+++IYGQE N+TTWKL KMNLAI
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240

Query  243  RGIEGNIGEHHADTFHNDLHKTLKADFILANPPFNVSDWGGNELVDDVRWKFGTPPASNA  302
            RGI+ ++GE++ADTFHNDLHK LKAD+ILANPPFN SDWG + L+DD RW+FG PP +NA
Sbjct  241  RGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNA  300

Query  303  NYAWLQHMIYHLSPNGAAGIVLANGSLSSNTSNEGEIRKNILEADLVDAIVALPDKLFYS  362
            NYAW++HMI  L+PNG+AG+VLANGS+S++  +E EIRKN++E DLV+ IV+LP++LFYS
Sbjct  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360

Query  363  TGIPVSLWILNRNKKNHPKYRSREHEILFIDARNLGKMVDRRLRELTEEDIQKIAGTYRN  422
            T IPV LW+++ NK ++ K + R +EILFIDAR++G MV R L+E+++EDIQK+A TY++
Sbjct  361  TQIPVCLWFISNNKGQNGK-KERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHS  419

Query  423  WRKPDGK-YEDIKGFCKSVTLEDVRQNDYVLTPGRYVGISDVEDDGIPFEEKMETLTVEL  481
            WR  ++K YEDI GFCK V LE+V++N+Y+LTPGRYVG++DVE+D  PFE+KM  +T EL
Sbjct  420  WRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSEL  479

Query  482  RGLFDKSHQLEEEIKKKLGGIGYD  505
               F KS +LE++I+K L G+GY+
Sbjct  480  SEQFAKSKELEDQIRKSLEGLGYG  503

20) Rhom172_1470 in NC_015966


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  565 bits (2135),  Expect = 2e-162, Method: Compositional matrix adjust.
 Identities = 321/509 (64%), Positives = 413/509 (82%), Gaps = 9/509 (1%)

Query  9    ANLGFENKLWEMADKLRGHMDAAEYKHVVLGLIFLKYISDAFEEKYQELKAKQDTEFTDP  68
            A +GFE+KLW+ ADKLRG MDAAEYK+V LGLIFLKY+SD+FEEKY+ELK   +  ++D 
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELK---QDPYADE  58

Query  69   EDRDEYLAANVFWVPPEARWEKIQAAAPQPTIGQVIDEAMAAIERENPSLKGVLPKDYAR  128
            ED+DEYLA N+FWVP EARW+ I+  A +P IGQ+ID AM AIE+EN SLKGVLPK+YAR
Sbjct  59   EDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYAR  118

Query  129  PTLDKVRLGELVKLVGDINLKAQEYSVRDPLGRVYEYFLGKFAEKEGKRGGEYYTPQCVV  188
            P+LDK +LG+++ L   ++L   E   +D LGRVYEYF++KFA  EGK +GE+YTP  +V
Sbjct  119  PALDKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIV  177

Query  189  QLLVEMIEPYRGRVYDPCCGSGGMFVQSEKFVEAHGGKLGDIAIYGQESNPTTWRLCKMN  248
            +LLVEMIEPY+GR+YDPCCGSGGMFVQSE+FVE H G+L+DIAIYGQESNPTTW+L KMN
Sbjct  178  KLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMN  237

Query  249  LAIRRIDADLGPHHADTFHNDLHKDLKADYILANPPFNMSDWGGERLTDDPRWKYGVPPA  308
            LAIR ID DLG ++ADTFHNDLHK+LKADYILANPPFN SDWG ERL DD RW++GVPP 
Sbjct  238  LAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPK  297

Query  309  SNANYAWIQHFIYHLAPNGIAGFVMANGSLSTSTKAEFEIRKGIIEDDLVDCIVALPGQL  368
            +NANYAWI+H I  LAPNG AGFV+ANGS+STS K E+EIRK +IE+DLV+CIV+LPGQL
Sbjct  298  GNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQL  357

Query  369  FYTTQIPVSLWFLTRNKKADPKRGYRDRTGETLFIDARRMGRLVDRVHRELTQEEIRQIA  428
            FY+TQIPV LWF++ NK  + K   ++R  E LFIDAR +G++V R  +E+++E+I+++A
Sbjct  358  FYSTQIPVCLWFISNNKGQNGK---KERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVA  414

Query  429  DVYHAWKKGEG--YEDRPGWWKSATIEDIRRHDYVLTPGRYVGVEEQEDDGVPFEEKMAE  486
            + YH+W+  ++  YED +G  K   +E+++ ++Y+LTPGRYVG+ + E+D  PFE+KM  
Sbjct  415  QTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKR  474

Query  487  LTATLYEQFEEAHRLEAEIKKNLEVLGYG  515
            +T+ L EQF  +  LE +I+K+LE LGYG
Sbjct  475  ITSELSEQFAKSKELEDQIRKSLEGLGYG  503

21) Desdi_0308 in NC_019903


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  564 bits (2130),  Expect = 4e-162, Method: Compositional matrix adjust.
 Identities = 316/526 (61%), Positives = 421/526 (81%), Gaps = 35/526 (6%)

Query  3    VSLEFENKLWEMADKLRGNIQPSDYKSVILGLIFLKYISDSFEDKYNELLAEGDGFEEDR  62
             ++ FE+KLW+ ADKLRG++++++YK+V LGLIFLKY+SDSFE+KY+EL  +  + EED+
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  63   DAYLEDNIFFVPPSARWEFIKKSAKQSTIGQIIDEAMIAIERENKNLKGVLPKNYARPEL  122
            D YL +NIF VP  ARW++I+ +AK++ IGQ+ID AMIAIE+EN +LKGVLPK+YARP L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  123  DKTKLGELIDLFSFNLGNKAAKAQDILGRVYEYFLGKFGSSE----GEFYTPPSIVKLLV  178
            DK KLG++IDLF+F+LG+  ++ QD+LGRVYEYF++KF+S+E    GEFYTP+SIVKLLV
Sbjct  122  DKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  179  GMIEPYKGRVYDPCCGSGGMFVQSQKFVEEHRGRKDDIHIFGQEFTATTWRLCKMNLAIR  238
             MIEPYKGR+YDPCCGSGGMFVQS++FVE H+GR DDI I+GQE  +TTW+L KMNLAIR
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  239  GIDGNLGERDADTFGNDLHKNLRADFVLANPPFNVSDYTL--IQDDARWKYGIPPANNAN  296
            GID +LGER+ADTF NDLHK L+AD++LANPPFN SD     + DD RW++G+PP  NAN
Sbjct  242  GIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNAN  301

Query  297  YAWIEHIISKLSPNGVAGFVLANGSMSTSTKAEAEIRKNIIEAGLVDCIITMPPNLFYNV  356
            YAWIEH+ISKL+PNG AGFVLANGSMSTS K E EIRKN+IE +LV+CI+T+P +LFY+ 
Sbjct  302  YAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYST  361

Query  357  TIPVCLWFISKKRE-----NRKDKILFIDARKMGYMETRKHREMTDEEIKQIYDTYHNWR  411
             IPVCLWFIS+++      +RK+ ILFIDAR +G M +R  +E +DE+I+++ +TYH+WR
Sbjct  362  QIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWR  421

Query  412  DTGATSEKLMVAEKAKLYKIDNYKDEEMGEYQDIQGFCKSASIEEVRSHEYILTPGRYVG  471
            +T                  D+Y       Y+DI GFCK  ++EEV+++EYILTPGRYVG
Sbjct  422  GTN-----------------DKY-------YEDIAGFCKVVNLEEVKNNEYILTPGRYVG  457

Query  472  IEEVEDDGEPFDEKMAKLTGELAEMFAKSHTLEEEIKRRLGAIGYD  517
            + +VE+D EPF++KM ++T+EL+E FAKS  LE++I++ L ++GY+
Sbjct  458  LADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYG  503

22) Ngar_c29130 in NC_018719


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  563 bits (2124),  Expect = 1e-161, Method: Compositional matrix adjust.
 Identities = 319/505 (64%), Positives = 426/505 (85%), Gaps = 3/505 (0%)

Query  9    GDLGFEQKLWLAADKLRSNMDAAEYKHVVLGLIFLKYISDAFNEVYEEVKKDKTSDPEDI  68
            + +GFE+KLW AADKLR++MDAAEYK+V LGLIFLKY+SD+F+E Y E+K+D  +D ED 
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  69   DEYLARRAFWVPKEARWDYLQKNAKKPEIGKLIDEAMDLIERDNRSLKGVLLKNYSRPGL  128
            DEYLA   FWVPKEARW+Y++ NAKKPEIG+LID AM  IE++N SLKGVL K+Y+RP+L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  129  NKQRLGELIDLIGTIGLGDKENRSKDVLGRVYEYFLGQFADAEGKKGGQFYTPRSIVKLL  188
            +K++LG++IDL+ T+ LGD E+R +DVLGRVYEYF+++FA AEGK++G+FYTP SIVKLL
Sbjct  122  DKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  189  VEMLEPFKGRIFDPCCGSGGMFVQSEKFIEAHGGRIGDISIYGQESNQTTWRLCKMNLAI  248
            VEM+EP+KGRI+DPCCGSGGMFVQSE+F+E H GR++DI+IYGQESN TTW+L KMNLAI
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240

Query  249  RGIDATKIEW-GDSFRDDQFKDLRADFILANPPFNDSDWGGEHLQEDARWKFGVPPKNNA  307
            RGID    E+ +D+F++D  K+L+AD+ILANPPFN SDWG E+L +D RW+FGVPPK NA
Sbjct  241  RGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNA  300

Query  308  NFAWVQHFIHHLSPAGVAGFVLANGSMSSNTSGEGEIRKNIIEADLVDCMVALPSQLFYN  367
            N+AW++H I  L+P G AGFVLANGSMS++  +E EIRKN+IE DLV+C+V+LP+QLFY+
Sbjct  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360

Query  368  TMIPACLWFLSRNKGNHKFRARNGQILFIDARMMGVMIDRRHRELTDEDIKKISDTYHAW  427
            T IP CLWF+S NKG++  + R+ +ILFIDAR +G M+ R  +E++DEDI+K+++TYH+W
Sbjct  361  TQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSW  420

Query  428  RGELKDKKYEDIPGFCKSATLEEVRKQQWILTPGRYVGAeeeeeddeefeeKMNRLTSEL  487
            RG  +DK YEDI+GFCK   LEEV++++ ILTPGRYVG  + EED+E FE+KM+R+TSEL
Sbjct  421  RGT-NDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSEL  479

Query  488  AKQMEEGRRLDEEIKKNLASIGYRI  512
            + Q   ++ L+++I+K+L ++GY +
Sbjct  480  SEQFAKSKELEDQIRKSLEGLGYGV  504

23) AFE_2793 in NC_011761


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  563 bits (2125),  Expect = 1e-161, Method: Compositional matrix adjust.
 Identities = 308/513 (61%), Positives = 410/513 (80%), Gaps = 11/513 (2%)

Query  14   TSQSLESKLWATADKLRGHLDAADYKHVVLGLIFLKYISDRFAQRHEEIIREEAGTYA-A  72
            ++ ++E KLW +ADKLRG +DAA+YK+V LGLIFLKY+SD F ++  E+ ++    YA  
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQD---PYADE  58

Query  73   EDRDEYTAEGVFWVPASSRWAVVQTAAKQPDIGKRIDGAMTDIERENPHLKNILPKGYAR  132
            ED+DEY AE +FWVP  +RW  ++  AK+P+IG+ ID AM  IE+EN  LK +LPK YAR
Sbjct  59   EDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYAR  118

Query  133  PTLDQRRLGELVDLIGTIGLGTAEHQARDTLGRVYEYFLGRFASAEGKRGGEFYTPASVV  192
            P+LD+ +LG+++DL+ T+ LG +E + +D LGRVYEYF+++FASAEGK +GEFYTP+S+V
Sbjct  119  PALDKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIV  177

Query  193  RTLVTMLAPYKGRIYDPCCGSGGMFVQSEKFIEAHGGKVGDISVYGEESNPNTWKLALMN  252
            + LV M+ PYKGRIYDPCCGSGGMFVQSE+F+E H G+++DI++YG+ESNP TWKLA MN
Sbjct  178  KLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMN  237

Query  253  LAIRGIEADLGPEAADTFHKDLHPDLRADYILANPPFNISDWGGDLLRDDKRWQYGIPPT  312
            LAIRGI+ DLG   ADTFH+DLH +L+ADYILANPPFN SDWG + L DD RWQ+G+PP 
Sbjct  238  LAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPK  297

Query  313  GNANFAWVQHMVHHLAPYGIAGFVLANGSMSSNTSGEGEIRKNLIEADLVDCMVAMPGQL  372
            GNAN+AW++HM+  LAP G AGFVLANGSMS++  +E EIRKNLIE DLV+C+V++PGQL
Sbjct  298  GNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQL  357

Query  373  FYSTQIPVCLWFLAKNRDDGRGMTGKELFERTGEVLFIDARNMGFMADRTHRELTDEDIQ  432
            FYSTQIPVCLWF+++N    +G  GK   ER  E+LFIDAR++G M  RT +E++DEDIQ
Sbjct  358  FYSTQIPVCLWFISNN----KGQNGKK--ERKNEILFIDAREIGHMVSRTLKEFSDEDIQ  411

Query  433  KIADTYHNWRGDGDGEYADIPGFCKAASLDDIRKNGHVLTPGRYVGAAAKDDDGEPFEEK  492
            K+A+TYH+WRG  D  Y DI+GFCK  +L+++++N  +LTPGRYVG A  ++D EPFE+K
Sbjct  412  KVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQK  471

Query  493  MDRLTKELSAQLAEGRRLEDEMLKNFRVLGYEL  525
            M R+T ELS Q+A ++ LED++ K++  LGY +
Sbjct  472  MKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

24) Lferr_2418 in NC_011206


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  563 bits (2125),  Expect = 1e-161, Method: Compositional matrix adjust.
 Identities = 308/513 (61%), Positives = 410/513 (80%), Gaps = 11/513 (2%)

Query  14   TSQSLESKLWATADKLRGHLDAADYKHVVLGLIFLKYISDRFAQRHEEIIREEAGTYA-A  72
            ++ ++E KLW +ADKLRG +DAA+YK+V LGLIFLKY+SD F ++  E+ ++    YA  
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQD---PYADE  58

Query  73   EDRDEYTAEGVFWVPASSRWAVVQTAAKQPDIGKRIDGAMTDIERENPHLKNILPKGYAR  132
            ED+DEY AE +FWVP  +RW  ++  AK+P+IG+ ID AM  IE+EN  LK +LPK YAR
Sbjct  59   EDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYAR  118

Query  133  PTLDQRRLGELVDLIGTIGLGTAEHQARDTLGRVYEYFLGRFASAEGKRGGEFYTPASVV  192
            P+LD+ +LG+++DL+ T+ LG +E + +D LGRVYEYF+++FASAEGK +GEFYTP+S+V
Sbjct  119  PALDKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIV  177

Query  193  RTLVTMLAPYKGRIYDPCCGSGGMFVQSEKFIEAHGGKVGDISVYGEESNPNTWKLALMN  252
            + LV M+ PYKGRIYDPCCGSGGMFVQSE+F+E H G+++DI++YG+ESNP TWKLA MN
Sbjct  178  KLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMN  237

Query  253  LAIRGIEADLGPEAADTFHKDLHPDLRADYILANPPFNISDWGGDLLRDDKRWQYGIPPT  312
            LAIRGI+ DLG   ADTFH+DLH +L+ADYILANPPFN SDWG + L DD RWQ+G+PP 
Sbjct  238  LAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPK  297

Query  313  GNANFAWVQHMVHHLAPYGIAGFVLANGSMSSNTSGEGEIRKNLIEADLVDCMVAMPGQL  372
            GNAN+AW++HM+  LAP G AGFVLANGSMS++  +E EIRKNLIE DLV+C+V++PGQL
Sbjct  298  GNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQL  357

Query  373  FYSTQIPVCLWFLAKNRDDGRGMTGKELFERTGEVLFIDARNMGFMADRTHRELTDEDIQ  432
            FYSTQIPVCLWF+++N    +G  GK   ER  E+LFIDAR++G M  RT +E++DEDIQ
Sbjct  358  FYSTQIPVCLWFISNN----KGQNGKK--ERKNEILFIDAREIGHMVSRTLKEFSDEDIQ  411

Query  433  KIADTYHNWRGDGDGEYADIPGFCKAASLDDIRKNGHVLTPGRYVGAAAKDDDGEPFEEK  492
            K+A+TYH+WRG  D  Y DI+GFCK  +L+++++N  +LTPGRYVG A  ++D EPFE+K
Sbjct  412  KVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQK  471

Query  493  MDRLTKELSAQLAEGRRLEDEMLKNFRVLGYEL  525
            M R+T ELS Q+A ++ LED++ K++  LGY +
Sbjct  472  MKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

25) DCF50_p1411 in NC_018867


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  562 bits (2122),  Expect = 2e-161, Method: Compositional matrix adjust.
 Identities = 325/504 (65%), Positives = 419/504 (84%), Gaps = 16/504 (3%)

Query  4    VSLGFENQLWEMADKLRGNIESSEYKHVVLGLIFLKYVSDGFDEKYKelldegdgfeeda  63
             ++GFE++LW+ ADKLRG+++++EYK+V LGLIFLKYVSD+F+EKYKEL ++  + EED 
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  64   daYNEENIFFVPQEARWDFIKSQAKKPTIGQVIDDAMVAVEKSNATLKGVLPKNYARPEI  123
            D Y  ENIF VP+EARW++I+ +AKKP IGQ+ID AM+A+EK N +LKGVLPK+YARP +
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  124  DKTKLGELIDLFSFKIGDKEAKAQDVLGRVYEYFLGQFGSSE----GEFYTPPTIVKILV  179
            DK KLG++IDLF+FK+GD E++ QDVLGRVYEYF+++F+S+E    GEFYTP++IVK+LV
Sbjct  122  DKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  180  GMIEPYKGRVYDPCCGSGGMFVQSQRFVEEHEGRKDDIHIYGQEYTATTWRLCKMNLAIR  239
             MIEPYKGR+YDPCCGSGGMFVQS+RFVE H+GR DDI IYGQE  +TTW+L KMNLAIR
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  240  GIDGNLGDRDADTFGNDLHKNLRADYILANPPFNVSDYTL--IQDDVRWKYGIPPARNAN  297
            GID +LG+R+ADTF NDLHK L+ADYILANPPFN SD     + DD RW++G+PP  NAN
Sbjct  242  GIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNAN  301

Query  298  YAWISHMISKLSPSGIAGFVMANGSMSttttgegeIRKNIIEAPNGGLVDCIVTMPTNLF  357
            YAWI HMISKL+P+G AGFV+ANGSMST+  +E EIRKN+IE    +LV+CIVT+P +LF
Sbjct  302  YAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQ---DLVECIVTLPGQLF  358

Query  358  YTVTIPVCLWFVSKKRE-----NRKDKILFIDARKMGHMVTRKHRELSDEEIKQICDTYH  412
            Y+  IPVCLWF+S+++      +RK+ ILFIDAR +GHMV+R  +E+SDE+I+++ +TYH
Sbjct  359  YSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYH  418

Query  413  NWR--NDKGYEDIQGFCKSTSLDEVRGHEYILTPGRYVGIEEKEADSEPFEDKMDRLTVE  470
            +WR  NDK YEDI GFCK  +L+EV+ +EYILTPGRYVG+ + E D EPFE+KM R+T E
Sbjct  419  SWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSE  478

Query  471  LAEMFAKSRHLEDEIRERLGGIGY  494
            L+E FAKS++LED+IR  L G+GY
Sbjct  479  LSEQFAKSKELEDQIRKSLEGLGY  502

26) Veis_3006 in NC_008786


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  562 bits (2122),  Expect = 2e-161, Method: Compositional matrix adjust.
 Identities = 300/508 (60%), Positives = 416/508 (82%), Gaps = 7/508 (1%)

Query  11   SNLGFEAEMFKAADKLRGNMEPSDYKHVALGLIFLKYISDTFEARHKSLLADNPQDVEDR  70
            + +GFE  + +AADKLRG+M++++YK+VALGLIFLKY+SD+FE + K L  D   D ED+
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  71   DAYLADNVFWVPKDARWSHLQAHAKQPTIGTLIDDAMRAIEKDNATLQSVLPKDYARPAL  130
            D YLA+N+FWVPK+ARW  ++ +AK+P IG LID AM AIEK+N +L++VLPK+YARPAL
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  131  NKVMLGELIDLISGITLNQEGHASRDILGRVYEYFLGQFAGAEGKRGGEFYTPGSVVRTL  190
            +K  LG++IDL++ + L +     +D+LGRVYEYF+++FA+AEGK +GEFYTP+S+V+ L
Sbjct  122  DKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  191  VEMLEPYQGRIYDPCCGSGGMFVQSEKFVQEHGGRIGDIAIYGQESNHVTWRLAKMNLAV  250
            VEM+EPY+GRIYDPCCGSGGMFVQSE+FV+ H GR++DIAIYGQESN  TW+LAKMNLA+
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240

Query  251  RGIDSDIRWNNEGSFHKDELRDLKADYILANPPFNISDWGGDRLREDVRWKFGVPPVGNA  310
            RGID+D+   N ++FH+D  ++LKADYILANPPFN SDWG +RL +D RW+FGVPP GNA
Sbjct  241  RGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNA  300

Query  311  NYAWLQHIVHHLAPNGTAGVVLANGSMSSSQSGEGDIRREMVEQDIVDCMVALPGQLFYS  370
            NYAW++H++  LAPNGTAG VLANGSMS+S  +E +IR++++EQD+V+C+V+LPGQLFYS
Sbjct  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360

Query  371  TQIPACLWFLARDKSNGRAGKAYLRDRRKEVLFIDARKLGVLVDRTRRELTDADVRRIAG  430
            TQIP CLWF++ +K  G+ GK   ++R++E+LFIDAR +G +V RT +E++D D++++A 
Sbjct  361  TQIPVCLWFISNNK--GQNGK---KERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQ  415

Query  431  TYHAWRGEPGVGAYADVPGFCKAATLDDIRKHGHVLTPGRYVGAEEVADDGTPFEEKMQI  490
            TYH+WRG  +   Y D++GFCK   L++++++  +LTPGRYVG  +V +D  PFE+KM+ 
Sbjct  416  TYHSWRGTND-KYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKR  474

Query  491  LTAELNAQFAESARLEQAIRLNLQALGY  518
            +T+EL+ QFA S  LE+ IR +L++LGY
Sbjct  475  ITSELSEQFAKSKELEDQIRKSLEGLGY  502

27) Galf_1218 in NC_014394


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  559 bits (2109),  Expect = 2e-160, Method: Compositional matrix adjust.
 Identities = 298/504 (60%), Positives = 416/504 (83%), Gaps = 3/504 (0%)

Query  11   GNLGFEAEMFKAADKLRGNMEPSDYKHVALGLIFLKYISDAFEARHKALLEEDPQAAEDK  70
            + +GFE  + +AADKLRG+M++++YK+VALGLIFLKY+SD+FE + K L ++     ED+
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  71   DEYLADNVFWVPKDARWSHLQANAKLPTIGTLIDDAMRAIEKDNESLKGVLPKDYARPAL  130
            DEYLA+N+FWVPK+ARW  ++ NAK P IG LID AM AIEK+NESLKGVLPK+YARPAL
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  131  NKVMLGELIDLISGIALNEEGHASRDILGRVYEYFLGQFAGAEGKRGGEFYTPRSVVRVL  190
            +K  LG++IDL++ + L +     +D+LGRVYEYF+++FA+AEGK +GEFYTP S+V++L
Sbjct  122  DKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  191  VEMLEPYQGRIYDPCCGSGGMFVQSEKFVQEHGGRIGDIAIYGQESNYVTWRLAKMNLAV  250
            VEM+EPY+GRIYDPCCGSGGMFVQSE+FV+ H GR++DIAIYGQESN  TW+LAKMNLA+
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240

Query  251  RGIDSDIRWNNEGSFHKDELRDLKADYILANPPFNISDWGGDRLREDVRWKFGAPPVGNA  310
            RGID+D+   N ++FH+D  ++LKADYILANPPFN SDWG +RL +D RW+FG PP GNA
Sbjct  241  RGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNA  300

Query  311  NYAWLQHIVHHLAPNGTAGVVLANGSMSSTQSGEGDIRREMVEKDILDCMVALPGQLFYS  370
            NYAW++H++  LAPNGTAG VLANGSMS++  +E +IR++++E+D+++C+V+LPGQLFYS
Sbjct  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360

Query  371  TQIPACLWFLARNKNPGNGWRDRRGEVLFIDARKLGVLVDRTRRELSDADVQKIADTYHA  430
            TQIP CLWF++ NK   NG ++R+ E+LFIDAR +G +V RT +E+SD D+QK+A+TYH+
Sbjct  361  TQIPVCLWFISNNKGQ-NGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHS  419

Query  431  WRGEPNAGAYEDISGFCKSASLDDIRKQGHVVAPGRYVGAAETDDDEEPTSEKLSRLSSQ  490
            WRG  N   YEDI+GFCK  +L++++++  +++PGRYVG A+ ++DEEP  +K+ R++S+
Sbjct  420  WRG-TNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSE  478

Query  491  LRTHFSENAQLEQAIKNALTEIGY  514
            L  +F+ + +LE+ I+++L  +GY
Sbjct  479  LSEQFAKSKELEDQIRKSLEGLGY  502

28) Amico_0449 in NC_014011


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  558 bits (2106),  Expect = 3e-160, Method: Compositional matrix adjust.
 Identities = 319/501 (64%), Positives = 414/501 (83%), Gaps = 12/501 (2%)

Query  3    VNLEFEDKLWEMADKLRGNIQPSDYKDVVLGLIFLKYISDSFEEKYNELVAEEEGFEEDR  62
              + FE+KLW+ ADKLRG++++++YK+V LGLIFLKY+SDSFEEKY+EL  +  + EED+
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  63   DAYVAENIFYVPPSARWDFIKKNAKQSTIGQIIDDAMITIERENRNLKGVLPKNYARPEL  122
            D Y+AENIF VP  ARW++I+ NAK++ IGQ+ID AMI+IE+EN +LKGVLPK+YARP L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  123  DKAKLGELVDLFSFNLGNKEAKAQDILGRVYEYFLGKFGSSE----GEFYTPPSIVKLLV  178
            DK KLG+++DLF+F+LG+ E++ QD+LGRVYEYF++KF+S+E    GEFYTP+SIVKLLV
Sbjct  122  DKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  179  GMIEPYKGRVYDPCCGSGGMFVQSSRFVEEHQGRKDDIHIFGQEYTATTWRLCKMNLAIR  238
             MIEPYKGR+YDPCCGSGGMFVQS RFVE HQGR DDI I+GQE  +TTW+L KMNLAIR
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  239  GIDGNLGARDADTFGNDLHKNIRADYILANPPFNVSDYTL--IPDDARWKYGIPPEKNAN  296
            GID +LG R+ADTF NDLHK ++ADYILANPPFN SD     + DD RW++G+PP  NAN
Sbjct  242  GIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNAN  301

Query  297  YAWIEHIISKLSPTGVAGFVLANGSMSTTTKAEAEIRKNIIEAGLVDCIVTMPPNLFYNV  356
            YAWIEH+ISKL+P G AGFVLANGSMST+ K E EIRKN+IE +LV+CIVT+P +LFY+ 
Sbjct  302  YAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYST  361

Query  357  TIPVCLWFISKKRE-----NKQDKILFIDARKMGTMVTRKHREFSDGEIAKIYDTYHNWR  411
             IPVCLWFIS+++      ++++ ILFIDAR +G MV+R  +EFSD +I K+ +TYH+WR
Sbjct  362  QIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWR  421

Query  412  DNKKE-YKDIQGFCKSADIEEVREHEYILTPGRYVGIeeveddgepfeeKMTRLTGELAE  470
            + +   Y DI GFCK  ++EEV+++EYILTPGRYVG+ +VE+D EPFE+KM R+T+EL+E
Sbjct  422  GTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSE  481

Query  471  MFAKSHKLEEEIKQRLGAIGY  491
             FAKS  LE++I++ L ++GY
Sbjct  482  QFAKSKELEDQIRKSLEGLGY  502

29) SCE1572_29145 in NC_021658


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  558 bits (2107),  Expect = 4e-160, Method: Compositional matrix adjust.
 Identities = 313/501 (63%), Positives = 415/501 (83%), Gaps = 4/501 (0%)

Query  151  LGFERKLFQAADKLRNNMDAAEYKHVVLGLIFLKYISDAFDDLHQRLSAQVDEGADPEDR  210
            +GFE KL QAADKLR +MDAAEYK+V LGLIFLKY+SD+F++  + L    D  AD ED+
Sbjct  4    IGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQ--DPYADEEDQ  61

Query  211  DEYRAERVFWVPKEARWAAIQANAKQPKIGQVIDDAMVAIERDNLSLKGVLPKNYGRPQL  270
            DEY AE +FWVPKEARW  I+ NAK+P IGQ+ID AM+AIE++N SLKGVLPK+Y+RP L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  271  DKQRLGELVDLIGTIGFGSRQSRSKDILGRVYEYFLSEFALAEGKKGGQFYTPGSVVRLL  330
            DK++LG+++DL+ T+ +G  +SR +D+LGRVYEYF++ FA AEGK++G+FYTP+S+V+LL
Sbjct  122  DKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  331  VKMLAPYKGRVYDPCCGSGGMFVQSEKFIEKHGGRVGDISVYGQESNPTTWRLAKMNLAI  390
            V M+ PYKGR+YDPCCGSGGMFVQSE+F+EKH GR++DI++YGQESNPTTW+LAKMNLAI
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240

Query  391  RGIEANLGPENADTFHRDLHRDLKADYILANPPFNAKDWGQERLKEDVRWKYGTPPASSA  450
            RGI+ +LG  NADTFH DLH++LKADYILANPPFNA DWGQERL +D RW++G PP ++A
Sbjct  241  RGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNA  300

Query  451  NFAWVQHFIHHLAPAGQAGFVLANGSMSSNQSGEGEIRKAIIEADLVDCMVALPGQLFYS  510
            N+AW++H I  LAP G AGFVLANGSMS++  +E EIRK +IE DLV+C+V+LPGQLFYS
Sbjct  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360

Query  511  TQIPVCFWFLARDKKNGRFRDRRGQILFIDARKLGRMIDRTQRELTDEDVARVAGTYHAW  570
            TQIPVC+WF++ +K +   ++R+ +ILFIDAR +G+M+ RT +E++DED+ +VA TYH+W
Sbjct  361  TQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSW  420

Query  571  RGDKGAGKYEDIAGFCKNATLDEVRAHQHVLTPGRYVGAedvedeeepfeeRFSKLVAKL  630
            RG ++   YEDIAGFCK   L+EV+ ++ +LTPGRYVG  DVE++EEPFE++  ++ + L
Sbjct  421  RGTNDK-YYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSEL  479

Query  631  NEQFDEGRKLELEISRRLATL  651
            +EQF  ++ LE +I + L  L
Sbjct  480  SEQFAKSKELEDQIRKSLEGL  500

30) GYMC52_2379 in NC_014915


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  552 bits (2084),  Expect = 2e-158, Method: Compositional matrix adjust.
 Identities = 313/505 (62%), Positives = 418/505 (83%), Gaps = 9/505 (1%)

Query  1    MATIGFEEKLWSAADKLRNNMDAAEYKHVVLGLIFLKYVSDTFQEKWEELMKEDPDFAED  60
            MATIGFEEKLW AADKLR +MDAAEYK+V LGLIFLKYVSD+F+EK  EL ++     ED
Sbjct  1    MATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEED  60

Query  61   RDAYMADGVFWVPETARWSYIAERSKSPEIGKIVDEALDAIEKENDSLKGVLPKNYSRPE  120
            +D Y+A+ +FWVP  ARW YI + +K PEIG+++D A+ AIEKEN+SLKGVLPK+Y+RP 
Sbjct  61   QDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPA  120

Query  121  LDKRILGEIIDLFSNIDVGGSGAKEKDVLGRVYEYFLGKFAASEGKGGGEFYTPKCVVKL  180
            LDK  LG+IIDLF+ + +G++ ++ +DVLGRVYEYF++KFA++EGK +GEFYTP  +VKL
Sbjct  121  LDKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKL  179

Query  181  MVEMIQPFKGYVYDPACGSGGMFVQSMKFVEEHAGNKFDISIYGQESNPTTWKLAKMNLA  240
            +VEMI+P+KG +YDP CGSGGMFVQS +FVE H G   DI+IYGQESNPTTWKLAKMNLA
Sbjct  180  LVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLA  239

Query  241  IRGIENNLGPKHADTFHEDLHPTLKADYILANPPFNDSDWGQPKLIDDPRWKFGIPPAGN  300
            IRGI+N+LG ++ADTFH+DLH  LKADYILANPPFN SDWGQ +L+DD RW+FG+PP GN
Sbjct  240  IRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGN  299

Query  301  ANYAWLQHMIDKLSQNGKAAVVLANGSLSSMTSGEGEIRKNIVNADLVDAIIALPDKLFY  360
            ANYAW++HMI KL+ NG A+ VLANGS+S+   +E EIRKN+++ DLV+ I++LP++LFY
Sbjct  300  ANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFY  359

Query  361  TTQIPVCIWILNRNK----KHPRKT--LFIDARKFGQLVTRKLRELTDEDIRKIADTYIN  414
            +TQIPVC+W+++ NK    K  RK   LFIDAR +G++V+R L+E++DEDI+K+A+TY +
Sbjct  360  STQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHS  419

Query  415  WQNNEN--YEDVQGFCKSATIDDIREHNYILTPGRYVGIeeeeedgesfeekmeRLTATL  472
            W+  ++  YED+ GFCK   ++++++++YILTPGRYVG+ + EED E+FE+KM R+T+ L
Sbjct  420  WRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSEL  479

Query  473  AKQFQKSRQLEEEIRKQLGGIGYEI  497
            + QF KS++LE++IRK L G+GY +
Sbjct  480  SEQFAKSKELEDQIRKSLEGLGYGV  504

31) GYMC61_0286 in NC_013411


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  552 bits (2084),  Expect = 2e-158, Method: Compositional matrix adjust.
 Identities = 313/505 (62%), Positives = 418/505 (83%), Gaps = 9/505 (1%)

Query  1    MATIGFEEKLWSAADKLRNNMDAAEYKHVVLGLIFLKYVSDTFQEKWEELMKEDPDFAED  60
            MATIGFEEKLW AADKLR +MDAAEYK+V LGLIFLKYVSD+F+EK  EL ++     ED
Sbjct  1    MATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEED  60

Query  61   RDAYMADGVFWVPETARWSYIAERSKSPEIGKIVDEALDAIEKENDSLKGVLPKNYSRPE  120
            +D Y+A+ +FWVP  ARW YI + +K PEIG+++D A+ AIEKEN+SLKGVLPK+Y+RP 
Sbjct  61   QDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPA  120

Query  121  LDKRILGEIIDLFSNIDVGGSGAKEKDVLGRVYEYFLGKFAASEGKGGGEFYTPKCVVKL  180
            LDK  LG+IIDLF+ + +G++ ++ +DVLGRVYEYF++KFA++EGK +GEFYTP  +VKL
Sbjct  121  LDKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKL  179

Query  181  MVEMIQPFKGYVYDPACGSGGMFVQSMKFVEEHAGNKFDISIYGQESNPTTWKLAKMNLA  240
            +VEMI+P+KG +YDP CGSGGMFVQS +FVE H G   DI+IYGQESNPTTWKLAKMNLA
Sbjct  180  LVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLA  239

Query  241  IRGIENNLGPKHADTFHEDLHPTLKADYILANPPFNDSDWGQPKLIDDPRWKFGIPPAGN  300
            IRGI+N+LG ++ADTFH+DLH  LKADYILANPPFN SDWGQ +L+DD RW+FG+PP GN
Sbjct  240  IRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGN  299

Query  301  ANYAWLQHMIDKLSQNGKAAVVLANGSLSSMTSGEGEIRKNIVNADLVDAIIALPDKLFY  360
            ANYAW++HMI KL+ NG A+ VLANGS+S+   +E EIRKN+++ DLV+ I++LP++LFY
Sbjct  300  ANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFY  359

Query  361  TTQIPVCIWILNRNK----KHPRKT--LFIDARKFGQLVTRKLRELTDEDIRKIADTYIN  414
            +TQIPVC+W+++ NK    K  RK   LFIDAR +G++V+R L+E++DEDI+K+A+TY +
Sbjct  360  STQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHS  419

Query  415  WQNNEN--YEDVQGFCKSATIDDIREHNYILTPGRYVGIeeeeedgesfeekmeRLTATL  472
            W+  ++  YED+ GFCK   ++++++++YILTPGRYVG+ + EED E+FE+KM R+T+ L
Sbjct  420  WRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSEL  479

Query  473  AKQFQKSRQLEEEIRKQLGGIGYEI  497
            + QF KS++LE++IRK L G+GY +
Sbjct  480  SEQFAKSKELEDQIRKSLEGLGYGV  504

32) hsdM in NC_012796


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  552 bits (2084),  Expect = 2e-158, Method: Compositional matrix adjust.
 Identities = 299/501 (60%), Positives = 403/501 (81%), Gaps = 2/501 (0%)

Query  29   ANLGFEGELFKAADKLRGNMEPSDYKHVALGLIFLKHISDSFEAKHAALTAEDPSCAEDP  88
            A +GFE  L +AADKLRG+M++++YK+VALGLIFLK +SDSFE K   L  +  +  ED 
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  89   DEYLAENIFWVPKEARWSHLQANAKQPGIGKIVDDALVAIEAKNESLKGVLPKDYARPAL  148
            DEYLAENIFWVPKEARW  ++ NAK+P IG+++D A++AIE  NESLKGVLPK+YARPAL
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  149  NKVMLGELIDLISGIGLGTEQGQSRDVLGRVYEYFLSQFAGSEGKRGGEFYTPRSVVRVL  208
            +K  LG++IDL++ + LG  +++ +DVLGRVYEYF+++FA++EGK +GEFYTP S+V++L
Sbjct  122  DKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  209  VDMLEPFKGRVYDPCCGSGGMFVQSNKFVAEHGGRLGDIAIYGQESNYTTWRLCKMNLAV  268
            V+M+EP+KGR+YDPCCGSGGMFVQS++FV  H GRL+DIAIYGQESN TTW+L KMNLA+
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240

Query  269  RGIDSDIRWNSEGSFHKDELKDLRADFILANPPFNISDWGGERLREDVRWSFGIPPAGNA  328
            RGID+D+   + ++FH+D  K+L+AD+ILANPPFN SDWG ERL +D RW FG+PP GNA
Sbjct  241  RGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNA  300

Query  329  NFAWLQHIFHHLGPNGTAGVVLANGSMSSSQSGEGDIRKAMLEADVVDCMIALPGQLFYS  388
            N+AW++H++  L+PNGTAG VLANGSMS+S  +E +IRK ++E D+V+C+++LPGQLFYS
Sbjct  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360

Query  389  TQIPACLWFLARDKANHGFRDRRGEVLFIDARKLGHLVDRTRREFSAEDIAKIAGTYHAW  448
            TQIP CLWF++ +K+++G ++R+ E+LFIDAR +GH+V RT +EFS EDI K+A TYH+W
Sbjct  361  TQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSW  420

Query  449  RGEKDTGEYEDVPGFCKAASLEEIKGHGYVLTPGRYVGAEVVDDDDTPFEERFVALKERL  508
            RG +D   YED++GFCK  +LEE+K + Y+LTPGRYVG   V++D+ PFE++   +   L
Sbjct  421  RGTNDK-YYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSEL  479

Query  509  EGQFVDAERLTATIRVRLGLL  529
              QF  +  L   IR  L  L
Sbjct  480  SEQFAKSKELEDQIRKSLEGL  500

33) hsdM1 in NC_010163


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  549 bits (2071),  Expect = 2e-157, Method: Compositional matrix adjust.
 Identities = 294/469 (63%), Positives = 393/469 (84%), Gaps = 11/469 (2%)

Query  6    LGFEDKLWQMADKLRGNIESSEYKHVILGLVFLKYISDSFTERYEEIKANYPGMEEDRDA  65
            +GFE+KLWQ ADKLRG+++++EYK+V LGL+FLKY+SDSF E+Y E+K +  + EED+D 
Sbjct  4    IGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDE  63

Query  66   YESENVFFVPKDARWEYIKSQAKQSTIGQIIDNAMVQIEKENASLKGVLPKNYARPELDK  125
            Y +EN+F VPK+ARW+YI+ +AK++ IGQ+ID+AM+ IEKEN SLKGVLPK+YARP LDK
Sbjct  64   YLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALDK  123

Query  126  TRLGELIDLFSFNVGSKEARAKDVLGRVYEYFLKKFGTTEG----EFYTPPAIVKLLVNM  181
             +LG++IDLF+F++G  E+R +DVLGRVYEYF+ KF+++EG    EFYTP++IVKLLV+M
Sbjct  124  EKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEM  183

Query  182  IEPYNGRVYDPCCGSGGMFVQSAKFVEEHAGKIGNISIYGQEYVATTWRLAKMNLAIRGI  241
            IEPY+GR+YDPCCGSGGMFVQS +FVE H G++++I+IYGQE  +TTW+LAKMNLAIRGI
Sbjct  184  IEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGI  243

Query  242  DANLGERDGDTFTNDQHKTLRADYILANPPFNIKDWGQQHLIGDSRWQWGTPPATNANYA  301
            D +LGER++DTF ND HK L+ADYILANPPFN  DWGQ++L++D RWQ G PP  NANYA
Sbjct  244  DNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYA  303

Query  302  WISHMISKLSPRGIAGFVLANGSLSTSRSEEYEIRKKILEEGLVDCIVAMPSQLFYDVSI  361
            WI HMISKL+P G AGFVLANGS+STS  +E EIRK+++E++LV+CIV++P+QLFY   I
Sbjct  304  WIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQI  363

Query  362  PVSLWFVSKN-----KNGRKDKVLFIDARKMGYMETRKHRELTDEESEKIYSTYHAWRDD  416
            PV LWF+S+N     K+ RK+ +LFIDAR +G M +R  +E++DE+ +K+  TYH+WR+ 
Sbjct  364  PVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGT  423

Query  417  KD--YQDIDGFCKSATLEEIRSHDYVLTPGRYVGIEEVEDDGIPFEEKM  463
            +D  Y+DI GFCK   LEE+++++Y+LTPGRYVG+ +VE+D  PFE+KM
Sbjct  424  NDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKM  472

34) BTH_I2743 in NC_007651


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  549 bits (2071),  Expect = 2e-157, Method: Compositional matrix adjust.
 Identities = 296/505 (59%), Positives = 408/505 (81%), Gaps = 3/505 (0%)

Query  13   GTLGFEAELFKAADKLRGNMEPSDYKHVALGLIFLKYISDAFEARHKALLAEDVRAAEDK  72
            +T+GFE  L +AADKLRG+M++++YK+VALGLIFLKY+SD+FE + K L  +     ED+
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  73   DEYLADNVFWVPKEARWSHLQANAKLPAIGTLIDDAMRAIEKDNESLKGVLPKDYARPAL  132
            DEYLA+N+FWVPKEARW  ++ NAK P IG LID AM AIEK+NESLKGVLPK+YARPAL
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  133  NKVMLGELIDLISGIALNEEGDRSKDILGRVYEYFLGQFAGAEGKRGGEFYTPRSVVRVL  192
            +K  LG++IDL++ + L +   R +D+LGRVYEYF+++FA+AEGK +GEFYTP S+V++L
Sbjct  122  DKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  193  VEMLEPYSGRVYDPCCGSGGMFVQSEKFVHEHGGRIGDIAIYGQESNYTTWRLAKMNLAV  252
            VEM+EPY GR+YDPCCGSGGMFVQSE+FV+ H GR++DIAIYGQESN TTW+LAKMNLA+
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240

Query  253  RGIDSDIRWNNEGSFHKDELRDLKADYVLANPPFNISDWGGDRLREDVRWKFGAPPVGNA  312
            RGID+D+   N ++FH+D  ++LKADY+LANPPFN SDWG +RL +D RW+FG PP GNA
Sbjct  241  RGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNA  300

Query  313  NYAWLQHIFHHLAPNGTAGVVLANGSMSSNQSGEGEIRRAMIEADAVDCMVALPGQLFYS  372
            NYAW++H++  LAPNGTAG VLANGSMS++  +E EIR+ +IE D V+C+V+LPGQLFYS
Sbjct  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360

Query  373  TQIPACLWFLARNKNPGGGLRDRRGQVLFIDARKLGVLIDRTRRELNDDDIKRIADSYHA  432
            TQIP CLWF++ NK   G  ++R+ ++LFIDAR +G ++ RT +E++D+DI+++A++YH+
Sbjct  361  TQIPVCLWFISNNKGQNGK-KERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHS  419

Query  433  WRGEKEAGEYADVLGFCKSASLDEIRKHGHVLTPGRYVGAEAQADDGEPFDEVMRRLSAQ  492
            WRG ++   Y D+ GFCK  +L+E++++  +LTPGRYVG     +D EPF++ M+R++++
Sbjct  420  WRGTNDK-YYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSE  478

Query  493  WRAQQLEGQRVDDAIERNLRELGYG  517
               Q   ++ ++D I ++L  LGYG
Sbjct  479  LSEQFAKSKELEDQIRKSLEGLGYG  503

35) hsdM in NC_012489


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  548 bits (2068),  Expect = 4e-157, Method: Compositional matrix adjust.
 Identities = 306/505 (61%), Positives = 405/505 (81%), Gaps = 6/505 (1%)

Query  16   NIGFEAKLWAAADALRNNMDAAEYKHVVLGLIFLKYISDAFEIKHAELASQHADGADPED  75
             IGFE KLW AAD LR +MDAAEYK+V LGLIFLKY+SD+FE K  EL  ++   AD ED
Sbjct  3    TIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKEL--KQDPYADEED  60

Query  76   PDEYRADNIFWVPAEARWQFLKANAPQPGVGTMVDDAMAAIERDNPSLKGVLPKDYARPG  135
             DEY A+NIFWVP EARWQ+++ NA +P +G ++D AM AIE++N SLKGVLPK+YARP+
Sbjct  61   QDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPA  120

Query  136  LDKQRLGQIINLVSDIELGSSADKSKDTLGRVYEYFLSRFASAEGKSGGQFYTPSYVVRV  195
            LDK++LG+II+L + + LG +  + +D LGRVYEYF+++FASAEGK++G+FYTPS +V++
Sbjct  121  LDKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKL  179

Query  196  LVEMLAPYKGRVYDPCCGSGGMFVQSEKFIEAHAGKLDDISIYGQESNYTTWRLAKMNLA  255
            LVEM+ PYKGR+YDPCCGSGGMFVQSE+F+E H G+LDDI+IYGQESN TTW+LAKMNLA
Sbjct  180  LVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLA  239

Query  256  IRGIDAQIG--HGDTLHDDKHPDLKADYVLANPPFNDSDWRGELLKDDQRWAYGAPPAGN  313
            IRGID ++G  ++DT+H+D H +LKADY+LANPPFN SDW  E L DD RW +G PP GN
Sbjct  240  IRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGN  299

Query  314  ANFAWVQHFIHHLSPTGLAGFVLANGSMSSNQSGEGEIRKTIVEADLVDCMVALPGQLFY  373
            AN+AW++H I  L+P G AGFVLANGSMS++  +E EIRK ++E DLV+C+V+LPGQLFY
Sbjct  300  ANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFY  359

Query  374  STQIPVCLWFLArnkrngrfrdrrgHVLFIDARKLGSMADRVRRELTDADIANIADTYHA  433
            STQIPVCLWF++ NK +   ++R+ ++LFIDAR +G M  R  +E++D DI ++A+TYH+
Sbjct  360  STQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHS  419

Query  434  WRGDKDAGEYADVAGFCKSVYIDEIRQHGHVLTPGRYVGAEDIEDDGEPFELKMRRLSAQ  493
            WRG +D   Y D+AGFCK V ++E++++  +LTPGRYVG  D+E+D EPFE KM+R++++
Sbjct  420  WRGTNDK-YYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSE  478

Query  494  LHEQQIESADLDASILANLKELGYG  518
            L EQ   S +L+  I  +L  LGYG
Sbjct  479  LSEQFAKSKELEDQIRKSLEGLGYG  503

36) CAP2UW1_2711 in NC_013194


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  546 bits (2061),  Expect = 1e-156, Method: Compositional matrix adjust.
 Identities = 307/529 (59%), Positives = 409/529 (78%), Gaps = 28/529 (5%)

Query  13   ANLGFEAKLWLAADKLRNNMDAAEYKHVVLGLIFLKYISDTFDEHHARLVAGSVAKSGDY  72
            A +GFE KLW AADKLR +MDAAEYK+V LGLIFLKY+SD+F+E    L      K + Y
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKEL------KQDPY  55

Query  73   EGANPEDEDEYLAANVFWVPVDARWAQIQSRAKLPSIGKDVDDAMVALERDNPRLKGALN  132
              A+ ED+DEYLA N+FWVP +ARW  I+  AK P IG+ +D AM+A+E++N  LKG L 
Sbjct  56   --ADEEDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLP  113

Query  133  KNYGRADLDKHRLGELIDLIGSIQLADVASRSKDLLGRVFEYFLTQFASAEGKNGGQFYT  192
            K+Y+R+ LDK++LG++IDL+ +++L+D  SR +D+LGRV+EYF+++FASAEGKN+G+FYT
Sbjct  114  KEYARPALDKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYT  172

Query  193  PSCVVRVLVEMLAPYKGRIYDPCCGSGGMFVQSEKFVEAHGGQLGDISIYGQESNPTTRR  252
            PS +V++LVEM+ PYKGRIYDPCCGSGGMFVQSE+FVE H G+L+DI+IYGQESNPTT++
Sbjct  173  PSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWK  232

Query  253  LAIMNLALRGIEADFGVENADTFRRDLHPDLRADYVLANPPFNDSDWFRKD--DDVRWQF  310
            LA MNLA+RGI+ D+G  NADTF+ DLH +L+ADY+LANPPFN SDW +    DD RWQF
Sbjct  233  LAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQF  292

Query  311  GVPPKGNANFAWVQHFIHHLAPAGFAGFVLANGSMSSNQSGEGDIRQQLIEADLVDCMVA  370
            GVPPKGNAN+AW++H I  LAP G AGFVLANGSMS++  +E +IR++LIE DLV+C+V+
Sbjct  293  GVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVT  352

Query  371  LPGQLFYSTQIPVCLWFLTKSKAAEAKRHFRERRKQTLFIDARKLGTLIDRVHRELTDAD  430
            LPGQLFYSTQIPVCLWF++++K+ ++K   +ER+++ LFIDAR +G ++ R  +E++D D
Sbjct  353  LPGQLFYSTQIPVCLWFISNNKGQNGK---KERKNEILFIDAREIGHMVSRTLKEFSDED  409

Query  431  LQKIVTTYHAWRGDRVSHSPragegrgegaTAYEDLAGFCKSATTAEIAGHGFVLTPGRY  490
            +QK+  TYH+WRG                   YED+AGFCK     E+  + ++LTPGRY
Sbjct  410  IQKVAQTYHSWRGTNDKY--------------YEDIAGFCKVVNLEEVKNNEYILTPGRY  455

Query  491  VGAEEVEDDGEPFAEKMPRLVAELHAQFAESAKLESAIKANMEKLGYGL  539
            VG  +VE+D EPF +KM R+ +EL  QFA S  LE  I+ ++E LGYG+
Sbjct  456  VGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

37) Acid345_3758 in NC_008009


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  545 bits (2058),  Expect = 2e-156, Method: Compositional matrix adjust.
 Identities = 306/502 (61%), Positives = 398/502 (80%), Gaps = 6/502 (1%)

Query  11   EAKLWSMADALRNNMDAAEYKHVVLGLIFLKYISDAFEAKHAELEQKMDQGADPEDPDEY  70
            E KLW  AD LR +MDAAEYK+V LGLIFLKY+SD+FE K  EL Q  D  AD ED DEY
Sbjct  7    EEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQ--DPYADEEDQDEY  64

Query  71   RAVSIFWVPREARWAHLKDNAPQPKIGTLVDDAMAAIERDNQSLKGVLPKDYARPGLDKQ  130
             A +IFWVP+EARW  ++DNA +P IG L+D AM AIE++N+SLKGVLPK+YARP+LDK+
Sbjct  65   LAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKE  124

Query  131  RLGQLINLVSGIGLGTPAARAKDILGRVYEYFLAQFASAEGKKGGQFYTPSHVVRILVEM  190
            +LG++I+L + + LG   +R +D+LGRVYEYF+A+FASAEGK++G+FYTPS +V++LVEM
Sbjct  125  KLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEM  183

Query  191  LAPYKGRVYDPCCGSGGMFVSSEKFIEAHSGKLGDISIYGQESNYTTWRLAKMNLAIRGI  250
            + PYKGR+YDPCCGSGGMFV SE+F+E H G+L+DI+IYGQESN TTW+LAKMNLAIRGI
Sbjct  184  IEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGI  243

Query  251  DAQI--QHGDTFHNDRHPDLKADCVLANPPFNDSDWRGELLKEDKRWVFGVPPAGNANFA  308
            D ++  +++DTFHND H +LKAD +LANPPFN SDW  E L +D RW FGVPP GNAN+A
Sbjct  244  DNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYA  303

Query  309  WIQHFIYHLAPTGLAGFVLANGSMSTNTSGEGEIRKGIIESDLVDCMVALPGQLFYSTGI  368
            WI+H I  LAP G AGFVLANGSMST+  +E EIRK +IE DLV+C+V+LPGQLFYST I
Sbjct  304  WIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQI  363

Query  369  PVCLWFVARSKSSGRFRNRRGETLFIDARKFGSLIDRVHRELSDADVAKIAGTYHAWRGD  428
            PVCLWF++ +K+    ++R+ E LFIDAR +G ++ R  +E+SD D+ K+A TYH+WRG 
Sbjct  364  PVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGT  423

Query  429  EGAGGYADVAGFCKAATLDDIRKHSHILTPGRYVGAKETEDDGEPIEQKMKTLTDALRMQ  488
            ++   Y D+AGFCK   L++++++  ILTPGRYVG  + E+D EP+EQKMK +T  L  Q
Sbjct  424  NDK-YYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQ  482

Query  489  LAESRKLEGEITGNLKEIGYEL  510
            +A S+ LE++I  +L  +GY +
Sbjct  483  FAKSKELEDQIRKSLEGLGYGV  504

38) Syn6312_0891 in NC_019680


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  540 bits (2037),  Expect = 1e-154, Method: Compositional matrix adjust.
 Identities = 298/511 (59%), Positives = 411/511 (81%), Gaps = 13/511 (2%)

Query  13   ANLGYEAELFKAADKLRGNMEPSDYKHVVLGLIFLKHISDRFEAKQQELAAE-FPDDPEI  71
            A +G+E  L +AADKLRG+M++++YK+V LGLIFLK +SD FE K +EL  + ++D+   
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADE---  58

Query  72   LEDKDEYTAENVFWVPKESRWSYLQANAKQPTIGKLIDEAMLGLEKVNDSLKGVLPKEYA  131
             ED+DEY AEN+FWVPKE+RW Y++ NAK+P IG+LID AM+++EK N+SLKGVLPKEYA
Sbjct  59   -EDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYA  117

Query  132  RPALNAVMLGELIDLISNIAFGTSHDNARDVLGRVYEYFLGQFAGSEGKRGGEFYTPRSV  191
            RPAL+   LG++IDL++ + +G ++   +DVLGRVYEYF+++FA++EGK +GEFYTP S+
Sbjct  118  RPALDKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSI  176

Query  192  VRVMVEMLQPYQGRVYDPCCGSGGMFVQSEKFVEDHAGRIGDIAIYGQESNYTTWRLCKM  251
            V+++VEM++PY+GR+YDPCCGSGGMFVQSE+FVE H GR++DIAIYGQESN TTW+L KM
Sbjct  177  VKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKM  236

Query  252  NLAVRGIDSDIRWNSEGTFHKNELPDLRANFILANPPFNISDWGGDRIREDARWKFGIPP  311
            NLA+RGID+D+   + +TFH++   +L+A++ILANPPFN SDWG +R+ +D RW+FG+PP
Sbjct  237  NLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPP  296

Query  312  VGNANYAWLQHIWHHLAPTGTAGVVLANGSMSSQQSGEGDIRQAMIEGDAIDCMIALPGQ  371
             GNANYAW++H+   LAP GTAG VLANGSMS+   +E +IR+ +IE D ++C+++LPGQ
Sbjct  297  KGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQ  356

Query  372  LFYSTQIPACLWFLAKDKSNGIARDKKLRDRRGEILFIDARKLGYMVDRTRREFSDEDVA  431
            LFYSTQIP CLWF++++K++        ++R+ EILFIDAR +G MV RT +EFSDED+ 
Sbjct  357  LFYSTQIPVCLWFISNNKGQNGK-----KERKNEILFIDAREIGHMVSRTLKEFSDEDIQ  411

Query  432  KIAETYHCWREGAG--YEDIPGFCKSANLEEIRGHGYVLTPGRYVGAAAAEEDDTPFAEV  489
            K+A+TYH WR   +  YEDI+GFCK  NLEE++ + Y+LTPGRYVG A  EED+ PF + 
Sbjct  412  KVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQK  471

Query  490  MQQLTTKLGQQFQESARLESVIRENLQGLGY  520
            M+++T+ L++QF  S  LE  IR +L+GLGY
Sbjct  472  MKRITSELSEQFAKSKELEDQIRKSLEGLGY  502

39) Caur_1810 in NC_010175


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  540 bits (2038),  Expect = 9e-155, Method: Compositional matrix adjust.
 Identities = 297/510 (59%), Positives = 412/510 (81%), Gaps = 11/510 (2%)

Query  16   ANLGFEPQLWQTANALRGSMDAAEYKHVVLGLIFLKYISDAFEEHRERLQNIPNADPEDP  75
            A +GFE +LWQ+A+ LRGSMDAAEYK+V LGLIFLKY+SD+FEE    L++ P AD ED 
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  76   DEYRADNVFWVPPDARWVELRNNARQPNIGELIDQAMIAVERDNPSLKGVLPKDYARPAL  135
            DEY A+N+FWVP +ARW  + +NA++P+IG+LID+AMIA+E++N SLKGVLPK+YARPAL
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  136  DQQRLGQLIDLVSNIPVGTASARSKDVLGRVYEYFLSQFASAEGKKGGEFYTPRCVVRLL  195
            D+++LG++IDL + + +G + +R +DVLGRVYEYF+++FASAEGK++GEFYTP  +V+LL
Sbjct  122  DKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  196  VEMLEPYQGRVYDPCCGSAGMFIQSVEFIEAHATGNGNGSRARARISIYGQELNYTTWRL  255
            VEM+EPY+GR+YDPCCGS+GMF+QS  F+E H    ++       I+IYGQE N TTW+L
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDD-------IAIYGQESNPTTWKL  233

Query  256  AKMNLAIRGIDGRIEQ--GDTFRNDRFPDLKADYILANPPFNMKEWGGEQLRNDKRWQYG  313
            AKMNLAIRGID  + +  +DTF+ND   +LKADYILANPPFN  +WG E+L +D RWQ+G
Sbjct  234  AKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFG  293

Query  314  IPPVGNANFAWVQHIVHHLAPAGVAGFVLANGSMSSNQSGEGEIRRKLIEADLVDCMVAL  373
            +PP GNAN+AW++H++  LAP G AGFVLANGSMS++  +E EIR++LIE DLV+C+V+L
Sbjct  294  VPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTL  353

Query  374  PGQLFYSTQIPACLWFLARNRNNGKFRDRRKQILFIDARRLGRMVDRIHRELTDEEIERI  433
            PGQLFYSTQIP CLWF++ N+ +   ++R+++ILFIDAR +G+MV R  +E++DE+I+++
Sbjct  354  PGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKV  413

Query  434  ACTYHAWRGESDAGEYRDIPGFCKSASLEDVRKHGYVLTPGRYVGSEVREDDDEPFAEKM  493
            A TYH+WRG +D   Y DI+GFCK  +LE+V+++ Y+LTPGRYVG    E+D+EPF +KM
Sbjct  414  AQTYHSWRGTNDK-YYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKM  472

Query  494  QWLVAQLREQQAEAAKLDEAIVANLQELGF  523
            +++ ++L EQ A +  L++ I  +L+ LG+
Sbjct  473  KRITSELSEQFAKSKELEDQIRKSLEGLGY  502

40) Chy400_1958 in NC_012032


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  540 bits (2038),  Expect = 9e-155, Method: Compositional matrix adjust.
 Identities = 297/510 (59%), Positives = 412/510 (81%), Gaps = 11/510 (2%)

Query  16   ANLGFEPQLWQTANALRGSMDAAEYKHVVLGLIFLKYISDAFEEHRERLQNIPNADPEDP  75
            A +GFE +LWQ+A+ LRGSMDAAEYK+V LGLIFLKY+SD+FEE    L++ P AD ED 
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  76   DEYRADNVFWVPPDARWVELRNNARQPNIGELIDQAMIAVERDNPSLKGVLPKDYARPAL  135
            DEY A+N+FWVP +ARW  + +NA++P+IG+LID+AMIA+E++N SLKGVLPK+YARPAL
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  136  DQQRLGQLIDLVSNIPVGTASARSKDVLGRVYEYFLSQFASAEGKKGGEFYTPRCVVRLL  195
            D+++LG++IDL + + +G + +R +DVLGRVYEYF+++FASAEGK++GEFYTP  +V+LL
Sbjct  122  DKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  196  VEMLEPYQGRVYDPCCGSAGMFIQSVEFIEAHATGNGNGSRARARISIYGQELNYTTWRL  255
            VEM+EPY+GR+YDPCCGS+GMF+QS  F+E H    ++       I+IYGQE N TTW+L
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDD-------IAIYGQESNPTTWKL  233

Query  256  AKMNLAIRGIDGRIEQ--GDTFRNDRFPDLKADYILANPPFNMKEWGGEQLRNDKRWQYG  313
            AKMNLAIRGID  + +  +DTF+ND   +LKADYILANPPFN  +WG E+L +D RWQ+G
Sbjct  234  AKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFG  293

Query  314  IPPVGNANFAWVQHIVHHLAPAGVAGFVLANGSMSSNQSGEGEIRRKLIEADLVDCMVAL  373
            +PP GNAN+AW++H++  LAP G AGFVLANGSMS++  +E EIR++LIE DLV+C+V+L
Sbjct  294  VPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTL  353

Query  374  PGQLFYSTQIPACLWFLARNRNNGKFRDRRKQILFIDARRLGRMVDRIHRELTDEEIERI  433
            PGQLFYSTQIP CLWF++ N+ +   ++R+++ILFIDAR +G+MV R  +E++DE+I+++
Sbjct  354  PGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKV  413

Query  434  ACTYHAWRGESDAGEYRDIPGFCKSASLEDVRKHGYVLTPGRYVGSEVREDDDEPFAEKM  493
            A TYH+WRG +D   Y DI+GFCK  +LE+V+++ Y+LTPGRYVG    E+D+EPF +KM
Sbjct  414  AQTYHSWRGTNDK-YYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKM  472

Query  494  QWLVAQLREQQAEAAKLDEAIVANLQELGF  523
            +++ ++L EQ A +  L++ I  +L+ LG+
Sbjct  473  KRITSELSEQFAKSKELEDQIRKSLEGLGY  502

41) GYY_04435 in NC_015847


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  539 bits (2033),  Expect = 2e-154, Method: Compositional matrix adjust.
 Identities = 304/511 (60%), Positives = 402/511 (79%), Gaps = 17/511 (3%)

Query  1    MAKLGFEEDLWKAADKLRGNINASDYRNVVLGLIFLKYISDAFEERYKQLLLEVDEGADP  60
            MA +GFEE LW+AADKLRG+++A++Y+NV LGLIFLKY+SD+FEE+YK+L    D  AD 
Sbjct  1    MATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKEL--KQDPYADE  58

Query  61   EDPDEYKSNIHGKSVFWVPKESRWEYIQERAKLDSIGIVIDSAMELIEKENSRLKGILPK  120
            ED DEY ++    ++FWVPKE+RW+YI++ AK   IG +ID AM  IEKEN  LKG+LPK
Sbjct  59   EDQDEYLAE----NIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPK  114

Query  121  EYANPTLDKRRLGELVDLIGRITLIDRE-HSQDILGRVYEYFLGQFASAEGKKGGEFYTP  179
            EYA P+LDK +LG+++DL+  + L D E + QD+LGRVYEYF+++FASAEGK++GEFYTP
Sbjct  115  EYARPALDKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTP  173

Query  180  DCIVKLLVEMIGPYKGRVYDPCCGSGGMFVQSEKFVMEHSGRINDISIYGQESNPTTWKL  239
              IVKLLVEMI PYKGR+YDPCCGSGGMFVQSE+FV  H GR++DI+IYGQESNPTTWKL
Sbjct  174  SSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKL  233

Query  240  ANMNLAIRGIEADI--KFGDSFHNDLHPDLKADFILANPPFNISDWGGNLLTDDKRWKHG  297
            A+MNLAIRGI+ D+  + +D+FHNDLH +LKAD+ILANPPFN SDWG + L DD RW+ G
Sbjct  234  AKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFG  293

Query  298  VPPTGNANFAWVQHMIHHLSTTGIAGFVLANGSMSSNTSSEGEIRTDIINAGLVDAIVAL  357
            VPP GNAN+AW++HMI  L+  G AGFVLANGSMS++   E EIR ++I+ +LV+ IV+L
Sbjct  294  VPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTL  353

Query  358  PSQLFYNTQIPACLWFV-----RRGKEVRKGETLFIDAREMGEMISRKNRSLTEEDIKKI  412
            P+QLFY+TQIP CLWF+     + GK  RK E LFIDARE+G+M+SR  + +++EDI+K+
Sbjct  354  PGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKV  413

Query  413  AGVYHSWRNGEG--YEDVPGFCKSSDISDIEKQGFILTPGRYVGFKEEEDDGIPFEEKME  470
            A  YHSWR  ++  YED++GFCK  ++ ++ ++ +ILTPGRYVG+ + E+D  PFE+KM 
Sbjct  414  AQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMK  473

Query  471  SLVSELKKTFEEGEILDKRIKENLKKLGYEI  501
             + SEL   F  +  L+ +I+ +L  LGY +
Sbjct  474  RITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

42) Turpa_2670 in NC_018020


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  538 bits (2031),  Expect = 3e-154, Method: Compositional matrix adjust.
 Identities = 315/532 (60%), Positives = 418/532 (79%), Gaps = 31/532 (5%)

Query  50   ANLGFEATLFKAADKLRNNMDAAEYKHVVLGLIFLKYISDAFQEKHDQLVAEQAQGADPE  109
            A +GFE  L +AADKLR +MDAAEYK+V LGLIFLKY+SD+F+EK  +L   Q   AD E
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKEL--KQDPYADEE  59

Query  110  DRDEYKADNIFWVPKEARWSFIQAKAKMPEIGKLLDDAMDAIEHDNESLKGVLPKNYARP  169
            D+DEY A+NIFWVPKEARW +I+ +AK PEIG+L+D AM AIE +NESLKGVLPK+YARP
Sbjct  60   DQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARP  119

Query  170  ALDKQRLGELIDLIATIGLGRKENKSKDILGRVYEYFLSEFASAEGKKGGQFYTPRCVVQ  229
            ALDK++LG++IDL+ T+ LG  E++ +D+LGRVYEYF++ FASAEGK++G+FYTP  +V+
Sbjct  120  ALDKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVK  178

Query  230  TLVTMLAPYKGRVYDPCCGSGGMFVQSEKFIEEHGGKLGDISVYGQESNSTTWRLAKMNL  289
             LV M+ PYKGR+YDPCCGSGGMFVQSE+F+E H G+L+DI++YGQESN+TTW+LAKMNL
Sbjct  179  LLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNL  238

Query  290  AIRGIDSNLGQQWADTFRNDQHKDLKADYVLANPPFNDSDWGGEHLREDVRWQYGTPPSG  349
            AIRGID++LG++ ADTF+ND HK+LKADY+LANPPFN SDWG E+L +D RWQ+G PP G
Sbjct  239  AIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKG  298

Query  350  NANFAWVQHFIHHLSPTGQAGFVLANgsmssqssgegeIRKAIVEADLVDCMVALPGQLF  409
            NAN+AW++H I  L+P G AGFVLANGSMS+ + +E EIRK ++E DLV+C+V+LPGQLF
Sbjct  299  NANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLF  358

Query  410  YSTQIPVCLWFLTRDKRGTSTALSDRKYRDRRNEVLFIDARKMGAMIDRAHRELTDADIE  469
            YSTQIPVCLWF++ +K   +        ++R+NE+LFIDAR +G M+ R+ +E++D DI+
Sbjct  359  YSTQIPVCLWFISNNKGQNGK-------KERKNEILFIDAREIGHMVSRTLKEFSDEDIQ  411

Query  470  KIAGTYHAWRGDTSASPRLRSGSAEGRLLSGAEAPAKYADVPGFCKSATLDEIREHNYVL  529
            K+A TYH+WRG                          Y D++GFCK   L+E+++++Y+L
Sbjct  412  KVAQTYHSWRGTNDKY---------------------YEDIAGFCKVVNLEEVKNNEYIL  450

Query  530  TPGRYVGaedveeddeafedKMQRLTQQLYAQMAEGEKLDTVIKKNLKELGF  581
            TPGRYVG  DVEED+E+FE+KM+R+T +L  Q A +  L+  I+K+L  LG+
Sbjct  451  TPGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGY  502

43) GWCH70_1644 in NC_012793


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  538 bits (2029),  Expect = 4e-154, Method: Compositional matrix adjust.
 Identities = 312/505 (62%), Positives = 418/505 (83%), Gaps = 9/505 (1%)

Query  1    MATIGFEEKLWSAADKLRNNMDAAEYKHVVLGLIFLKYVSDTFQEKWEELMKEDPDFAED  60
            MATIGFEEKLW AADKLR +MDAAEYK+V LGLIFLKYVSD+F+EK  EL ++     ED
Sbjct  1    MATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEED  60

Query  61   RDAYMADGVFWVPETARWNYIAERSKLPEIGKIVDEALDAIEKENDSLKGVLPKNYSRPE  120
            +D Y+A+ +FWVP  ARW+YI + +K PEIG+++D A+ AIEKEN+SLKGVLPK+Y+RP 
Sbjct  61   QDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPA  120

Query  121  LDKRILGEIIDLFSNIDVGGSGAKEKDVLGRVYEYFLGKFAASEGKGGGEFYTPKCVVKL  180
            LDK  LG+IIDLF+ + +G++ ++ +DVLGRVYEYF++KFA++EGK +GEFYTP  +VKL
Sbjct  121  LDKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKL  179

Query  181  MVEMIQPFKGYVYDPACGSGGMFVQSIKFVEEHAGNKFDVSIYGQESNPTTWKLAKMNLA  240
            +VEMI+P+KG +YDP CGSGGMFVQS +FVE H G   D++IYGQESNPTTWKLAKMNLA
Sbjct  180  LVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLA  239

Query  241  IRGIENNLGPKHADTFHEDLHPTLKADYILANPPFNDSDWGQPKLVEDPRWKFGVPPAGN  300
            IRGI+N+LG ++ADTFH+DLH  LKADYILANPPFN SDWGQ +L++D RW+FGVPP GN
Sbjct  240  IRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGN  299

Query  301  ANYAWLQHIIDKLGQNGKAAVVLANgslssttsgegeIRKNIVNADLVDAIIALPDKLFY  360
            ANYAW++H+I KL+ NG A+ VLANGS+S++  +E EIRKN+++ DLV+ I++LP++LFY
Sbjct  300  ANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFY  359

Query  361  TTSIPVCIWILNRNKKNPGKT------LFIDARKFGQLVTRKLRELSDEDIRKIADTYIH  414
            +T IPVC+W+++ NK + GK       LFIDAR +G++V+R L+E+SDEDI+K+A+TY  
Sbjct  360  STQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHS  419

Query  415  WQNNDN--YEDVQGFCKSASLEEIREHDYILTPGRYVGVeeeeedgesfeekmeRLTTTL  472
            W+  ++  YED+ GFCK  +LEE+++++YILTPGRYVG+ + EED E+FE+KM R+T+ L
Sbjct  420  WRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSEL  479

Query  473  AKQFKKSRELEEEIRTQLGGIGFEL  497
            + QF KS+ELE++IR  L G+G+ +
Sbjct  480  SEQFAKSKELEDQIRKSLEGLGYGV  504

44) MmarC6_0039 in NC_009975


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  538 bits (2029),  Expect = 4e-154, Method: Compositional matrix adjust.
 Identities = 303/511 (60%), Positives = 402/511 (79%), Gaps = 17/511 (3%)

Query  1    MAKLGFEEDLWKAADKLRGNINASDYRNVVLGLIFLKYISDAFEERYKQLLLEVKDGADP  60
            MA +GFEE LW+AADKLRG+++A++Y+NV LGLIFLKY+SD+FEE+YK+L  +    AD 
Sbjct  1    MATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPY--ADE  58

Query  61   EDPDEYKSNIHGKSVFWVPKESRWEYIQELAKLDSIGIVIDSAMELIEKENSRLKGILPK  120
            ED DEY ++    ++FWVPKE+RW+YI++ AK   IG +ID AM  IEKEN  LKG+LPK
Sbjct  59   EDQDEYLAE----NIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPK  114

Query  121  EYANPTLDKRRLGELVDLIGRITLIDRE-HSQDILGRVYEYFLGQFASAEGKKGGEFYTP  179
            EYA P+LDK +LG+++DL+  + L D E + QD+LGRVYEYF+++FASAEGK++GEFYTP
Sbjct  115  EYARPALDKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTP  173

Query  180  DCIVKLLVEMIGPYKGRVYDPCCGSGGMFVQSEKFVIEHSGRINDISIYGQESNPTTWKL  239
              IVKLLVEMI PYKGR+YDPCCGSGGMFVQSE+FV  H GR++DI+IYGQESNPTTWKL
Sbjct  174  SSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKL  233

Query  240  ANMNLAIRGIEADI--KFGDSFHNDLHPDLKADFILANPPFNISDWGGNLLTDDKRWKYG  297
            A+MNLAIRGI+ D+  + +D+FHNDLH +LKAD+ILANPPFN SDWG + L DD RW++G
Sbjct  234  AKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFG  293

Query  298  TPPTGNANFAWVQHMIHHLSTTGIAGFVLANGSMSSNTSSEGEIRTNIINAGLVDAIVAL  357
             PP GNAN+AW++HMI  L+  G AGFVLANGSMS++   E EIR N+I+ +LV+ IV+L
Sbjct  294  VPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTL  353

Query  358  PSQLFYNTQIPACLWFV-----RRGKDVRNGETLFIDAREMGEMISRKNRSLTEEDIKKI  412
            P+QLFY+TQIP CLWF+     + GK  R+ E LFIDARE+G+M+SR  + +++EDI+K+
Sbjct  354  PGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKV  413

Query  413  AGVYHSWRNGEG--YEDVPGFCKSSDISDIEKQGFILTPGRYVGFKEEEDDGIPFEEKME  470
            A  YHSWR  ++  YED++GFCK  ++ ++ ++ +ILTPGRYVG+ + E+D  PFE+KM 
Sbjct  414  AQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMK  473

Query  471  SLVSELKKTFEEGEILDKQIKENLKKLGYEI  501
             + SEL   F  +  L+ QI+ +L  LGY +
Sbjct  474  RITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

45) Dgeo_2017 in NC_008025


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  537 bits (2027),  Expect = 6e-154, Method: Compositional matrix adjust.
 Identities = 307/501 (62%), Positives = 407/501 (82%), Gaps = 3/501 (0%)

Query  16   FEADLFKAADKLRGNMEPSDYKHVALGLIFLKYISDAFEARHQALLAEDPRAAEDRDEYL  75
            FE  L +AADKLRG+M++++YK+VALGLIFLKY+SD+FE + + L  +     ED+DEYL
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDEYL  65

Query  76   ADNVFWVPKEARWSHLRANARRPEIGLLIDEAMRAIEKENESLKGVLPKDYARPALNKVM  135
            A+N+FWVPKEARW  +  NA++PEIG LID AM AIEKENESLKGVLPK+YARPAL+K  
Sbjct  66   AENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEK  125

Query  136  LGELIDLISGIALGEEGDRSKDILGRVYEYFLGQFAGAEGKRGGEFYTPRSVVRVLVEML  195
            LG++IDL++ + LG+   R +D+LGRVYEYF+++FA+AEGK +GEFYTP S+V++LVEM+
Sbjct  126  LGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMI  184

Query  196  EPYHGRVYDPCCGSGGMFVQSEKFVQEHGGRIGDIAIYGQESNYTTWRLCKMNLAVRGID  255
            EPY GR+YDPCCGSGGMFVQSE+FV+ H GR++DIAIYGQESN TTW+L KMNLA+RGID
Sbjct  185  EPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGID  244

Query  256  ADIRWNNEGSFHKDELRDLKADFILANPPFNISDWGGERLREDVRWSFGVPPVGNANYAW  315
             D+   N ++FH+D  ++LKAD+ILANPPFN SDWG ERL +D RW FGVPP GNANYAW
Sbjct  245  NDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAW  304

Query  316  LQHIHHHLAPNGTAGVVLANGSMSSNQSGEGEIRKAMVEADVVDCMVALPGQLFYSTQIP  375
            ++H+   LAPNGTAG VLANGSMS++  +E EIRK ++E D+V+C+V+LPGQLFYSTQIP
Sbjct  305  IEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIP  364

Query  376  ACLWFLARNKNPGKGLRDRRGQVLFIDARKLGVLVDRTRRELTDAEIQKIADTYHAWRGE  435
             CLWF++ NK   +G ++R+ ++LFIDAR +G +V RT +E++D +IQK+A+TYH+WRG 
Sbjct  365  VCLWFISNNKGQ-NGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGT  423

Query  436  PDAGEYQDVPGFCKSATLEEIRKHGFVLTPGRYVGAAQQEDDGEPFEEKMarlaaqwreq  495
             D   Y+D++GFCK   LEE++++ ++LTPGRYVG A+ E+D EPFE+KM R++++  EQ
Sbjct  424  NDK-YYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQ  482

Query  496  raaaakldaaieaNLKELGYG  516
             A +  L+  I  +L  LGYG
Sbjct  483  FAKSKELEDQIRKSLEGLGYG  503

46) MmarC7_0019 in NC_009637


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  536 bits (2024),  Expect = 1e-153, Method: Compositional matrix adjust.
 Identities = 304/511 (60%), Positives = 403/511 (79%), Gaps = 17/511 (3%)

Query  1    MAKLGFEEDLWKAADKLRGNINASDYRNVVLGLIFLKYISDAFEERYNQLLLEVKDGADP  60
            MA +GFEE LW+AADKLRG+++A++Y+NV LGLIFLKY+SD+FEE+Y++L  +    AD 
Sbjct  1    MATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPY--ADE  58

Query  61   EDPDEYKSNIHGKSVFWVPKESRWEYIQERAKLDSIGVVIDGAMELIEKENSRLKGILPK  120
            ED DEY ++    ++FWVPKE+RW+YI++ AK   IG +ID AM  IEKEN  LKG+LPK
Sbjct  59   EDQDEYLAE----NIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPK  114

Query  121  EYANPTLDKRRLGELVDLIGRITLIDRE-HSQDILGRVYEYFLGQFASAEGKKGGEFYTP  179
            EYA P+LDK +LG+++DL+  + L D E + QD+LGRVYEYF+++FASAEGK++GEFYTP
Sbjct  115  EYARPALDKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTP  173

Query  180  DCIVKLLVEMIEPYKGRVYDPCCGSGGMFVQSEKFVIEHSGKINDISIYGQESNPTTWKL  239
              IVKLLVEMIEPYKGR+YDPCCGSGGMFVQSE+FV  H G+++DI+IYGQESNPTTWKL
Sbjct  174  SSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKL  233

Query  240  ANMNLAIRGIEADI--KFGDSFHNDLHPDLKADFILANPPFNISDWGGNLLTDDKRWKHG  297
            A+MNLAIRGI+ D+  + +D+FHNDLH +LKAD+ILANPPFN SDWG + L DD RW+ G
Sbjct  234  AKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFG  293

Query  298  VPPTGNANFAWVQHMIHHLSTTGIAGFVLANGSMSSNTSSEGEIRTNIINAGLVDAIVAL  357
            VPP GNAN+AW++HMI  L+  G AGFVLANGSMS++   E EIR N+I+ +LV+ IV+L
Sbjct  294  VPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTL  353

Query  358  PSQLFYNTQIPACLWFI-----RRGKEVRKGETLFIDAREMGEMISRKNRSLTEEDIKKI  412
            P+QLFY+TQIP CLWFI     + GK  RK E LFIDARE+G+M+SR  + +++EDI+K+
Sbjct  354  PGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKV  413

Query  413  AGVYHSWRNGEG--YEDVPGFCKSSDISDIEKQGFILTPGRYVGFKEEEDDGIPFEEKME  470
            A  YHSWR  ++  YED++GFCK  ++ ++ ++ +ILTPGRYVG+ + E+D  PFE+KM 
Sbjct  414  AQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMK  473

Query  471  SLVSELKKTFEEGEILDKRIKENLKKLGYEI  501
             + SEL   F  +  L+ +I+ +L  LGY +
Sbjct  474  RITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

47) hsdM-1 in NC_006834


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  535 bits (2020),  Expect = 3e-153, Method: Compositional matrix adjust.
 Identities = 298/509 (59%), Positives = 407/509 (80%), Gaps = 7/509 (1%)

Query  137  VSELDYADKLWKTADKLRGNMEPSDYKHVVLGLIFLKYISDAFEARHaallaedppaaed  196
            ++ +++ +KLW++ADKLRG+M++++YK+V LGLIFLKY+SD+FE +   L  +  +  ED
Sbjct  1    MATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEED  60

Query  197  KDEYLAENIFWVPKQARWSHLQANAKQSSIGTLIDDALRAIEKDNESLKGVLPKDYARPA  256
            +DEYLAENIFWVPK+ARW  ++ NAK++ IG LID A+ AIEK+NESLKGVLPK+YARPA
Sbjct  61   QDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPA  120

Query  257  LNKVMLGELIDLISGIALNDKGGKPKDVLGRVYEYFLGQFAGAEGKRGGEFYTPRSVVHT  316
            L+K  LG++IDL++ + L D  ++ +DVLGRVYEYF+++FA+AEGK +GEFYTP S+V  
Sbjct  121  LDKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKL  179

Query  317  LVEMIEPYKGRIYDPCCGSGGMFVQSEKFVNEHGGRIGDIAIYGQESNYTTWRLCKMNLA  376
            LVEMIEPYKGRIYDPCCGSGGMFVQSE+FV+ H GR++DIAIYGQESN TTW+L KMNLA
Sbjct  180  LVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLA  239

Query  377  VRGIDSDIRWNNEGSFHKDELRDLKADFILANPPFNISDWGGERLRDDVRWAFGPPPVGN  436
            +RGID+D+   N ++FH+D  ++LKAD+ILANPPFN SDWG ERL DD RW FG PP GN
Sbjct  240  IRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGN  299

Query  437  ANYAWLQHIVHHLSPHGFAGVVLANGSMSSQQSGEGDIRKSMIEAGVVDCMVALPGQLFY  496
            ANYAW++H++  L+P+G AG VLANGSMS+   +E +IRK++IE ++V+C+V+LPGQLFY
Sbjct  300  ANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFY  359

Query  497  STQIPACLWILAKDRSNGLVLQSKLRDRRGEILFIDARNMGTLVDRTRRELSDAEVARIA  556
            STQIP CLW+++++++     Q+  ++R+ EILFIDAR++G +V RT +E+SD ++ ++A
Sbjct  360  STQIPVCLWFISNNKG-----QNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVA  414

Query  557  ATYHAWRGEQDAGDYADIAGFCKSAPLDEVRKHGHVLTPGRYVGAAAQEDDGEPFAQKMQ  616
             TYH+WRG +D   Y DIAGFCK   L+EV+++  +LTPGRYVG A  E+D EPF QKM+
Sbjct  415  QTYHSWRGTNDK-YYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMK  473

Query  617  RLATLWREQQQEAAKLDAAIEMNLKHLGF  645
            R+++   EQ   +  L+  I  +L  LG+
Sbjct  474  RITSELSEQFAKSKELEDQIRKSLEGLGY  502

48) XOO_3262 in NC_007705


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  535 bits (2020),  Expect = 3e-153, Method: Compositional matrix adjust.
 Identities = 298/509 (59%), Positives = 407/509 (80%), Gaps = 7/509 (1%)

Query  96   VSELDYADKLWKTADKLRGNMEPSDYKHVVLGLIFLKYISDAFEARHaallaedppaaed  155
            ++ +++ +KLW++ADKLRG+M++++YK+V LGLIFLKY+SD+FE +   L  +  +  ED
Sbjct  1    MATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEED  60

Query  156  KDEYLAENIFWVPKQARWSHLQANAKQSSIGTLIDDALRAIEKDNESLKGVLPKDYARPA  215
            +DEYLAENIFWVPK+ARW  ++ NAK++ IG LID A+ AIEK+NESLKGVLPK+YARPA
Sbjct  61   QDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPA  120

Query  216  LNKVMLGELIDLISGIALNDKGGKPKDVLGRVYEYFLGQFAGAEGKRGGEFYTPRSVVHT  275
            L+K  LG++IDL++ + L D  ++ +DVLGRVYEYF+++FA+AEGK +GEFYTP S+V  
Sbjct  121  LDKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKL  179

Query  276  LVEMIEPYKGRIYDPCCGSGGMFVQSEKFVNEHGGRIGDIAIYGQESNYTTWRLCKMNLA  335
            LVEMIEPYKGRIYDPCCGSGGMFVQSE+FV+ H GR++DIAIYGQESN TTW+L KMNLA
Sbjct  180  LVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLA  239

Query  336  VRGIDSDIRWNNEGSFHKDELRDLKADFILANPPFNISDWGGERLRDDVRWAFGPPPVGN  395
            +RGID+D+   N ++FH+D  ++LKAD+ILANPPFN SDWG ERL DD RW FG PP GN
Sbjct  240  IRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGN  299

Query  396  ANYAWLQHIVHHLSPHGFAGVVLANGSMSSQQSGEGDIRKSMIEAGVVDCMVALPGQLFY  455
            ANYAW++H++  L+P+G AG VLANGSMS+   +E +IRK++IE ++V+C+V+LPGQLFY
Sbjct  300  ANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFY  359

Query  456  STQIPACLWILAKDRSNGLVLQSKLRDRRGEILFIDARNMGTLVDRTRRELSDAEVARIA  515
            STQIP CLW+++++++     Q+  ++R+ EILFIDAR++G +V RT +E+SD ++ ++A
Sbjct  360  STQIPVCLWFISNNKG-----QNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVA  414

Query  516  ATYHAWRGEQDAGDYADIAGFCKSAPLDEVRKHGHVLTPGRYVGAAAQEDDGEPFAQKMQ  575
             TYH+WRG +D   Y DIAGFCK   L+EV+++  +LTPGRYVG A  E+D EPF QKM+
Sbjct  415  QTYHSWRGTNDK-YYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMK  473

Query  576  RLATLWREQQQEAAKLDAAIEMNLKHLGF  604
            R+++   EQ   +  L+  I  +L  LG+
Sbjct  474  RITSELSEQFAKSKELEDQIRKSLEGLGY  502

49) Mzhil_1432 in NC_015676


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  533 bits (2011),  Expect = 1e-152, Method: Compositional matrix adjust.
 Identities = 309/502 (62%), Positives = 418/502 (84%), Gaps = 4/502 (0%)

Query  11   TLEQKLWEAADKLRNNIDAAEYKHVVLGLIFIKYISDSFVELYQELEADEDSDPEDIDEY  70
             +E+KLW+AADKLR ++DAAEYK+V LGLIF+KY+SDSF E Y+EL  D  +D ED DEY
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDEY  64

Query  71   IARNIFWVPKESRWENIVADARNSTIGTTIDNAMRQLMKNNESLTGILPTNYGRPELDKH  130
            +A NIFWVPKE+RW+ I  +A+++ IG  ID+AM  + K+NESL G+LP +Y+RP LDK+
Sbjct  65   LAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKE  124

Query  131  KLGELVDIIHSIEFDESKESERDVLGRVYEYFLGNFASAEGKKGGEFYTPSCVVKTLVEM  190
            KLG+++D++ ++ ++++    +DVLGRVYEYF+++FASAEGK++GEFYTPS +VK LVEM
Sbjct  125  KLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEM  183

Query  191  IEPFNGRVYDPCHGSGGMFVQSRRFVEQHGGTDQDIYVYGQESNPTTWKLCKMNLALHGI  250
            IEP++GR+YDPC GSGGMFVQS RFVE+H G  +DI +YGQESNPTTWKL KMNLA++GI
Sbjct  184  IEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGI  243

Query  251  DNDV--RMGDTFREDKHPNLKVDYILANPPFNISDWGGENLQEDVRWKYGVPPKGNANYA  308
            DND+  R +DTF++D H  LK DYILANPPFN SDWG E L +D RW++GVPPKGNANYA
Sbjct  244  DNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYA  303

Query  309  WIQHMIYHLKPTGIAGFVLANGSLSSNTSGEGEIRKNILEDDLVDCIIAMPGQLFYNTGI  368
            WI+HMI  L P G AGFVLANGS+S++  +E EIRKN++E+DLV+CI+++PGQLFY+T I
Sbjct  304  WIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQI  363

Query  369  PCCLWFVTRDKKNHRFRDRRGEVLLIDARNMGVMVDRTHRELTNEDIKKIADTYHAWRGE  428
            P CLWF++ +K ++  ++R+ E+L+IDAR++G MV RT +E+++EDI+K+A+TYH+WRG 
Sbjct  364  PVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGT  423

Query  429  PDTGEYEDVAGFCKSATLDDIRKHDYVLTPGRYVGFAdeeeddepfeekmeRLTSQLSEQ  488
             D   YED+AGFCK   L+++++++Y+LTPGRYVG+AD EED+EPFE+KM R+TS+LSEQ
Sbjct  424  NDK-YYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQ  482

Query  489  FKKSNELEDKIRDNLREIGYEL  510
            F KS+ELED+IR +L  +GY +
Sbjct  483  FAKSKELEDQIRKSLEGLGYGV  504

50) K649_10265 in NC_021081


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  533 bits (2010),  Expect = 1e-152, Method: Compositional matrix adjust.
 Identities = 316/524 (61%), Positives = 410/524 (79%), Gaps = 24/524 (4%)

Query  16   ATVGYEAELWKMADTLRGSMDAAEYKHVVLGLIFLKYISDAFEELHRKLEAERAQGADPE  75
            AT+G+E  LW+ AD LRGSMDAAEYK+V LGLIFLKY+SD+FEE  + L  +    AD E
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPY--ADEE  59

Query  76   DPDEYRAQNIFWVPPEARWAHLKAQARQPTIGQLVDNAMACIERDNPALKGVLPKEYARP  135
            D DEY A+NIFWVP EARW  ++ +A++P IGQL+D+AM  IE++N +LKGVLPKEYARP
Sbjct  60   DQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARP  119

Query  136  ALDKTRLGQLIDLISNIKVGDEEARAKDVLGRVYEYFLSQFASAEGKKGGEFYTPRCVVK  195
            ALDK +LG++IDL++ +K+GD E+R +DVLGRVYEYF+++FASAEGK++GEFYTP  +VK
Sbjct  120  ALDKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVK  178

Query  196  LLVEMLEPYHGRVYDPCCGSAGMFVQSVEFIRAHATGNGNGGRAKADISIYGQESNYTTW  255
            LLVEM+EPY GR+YDPCCGS+GMFVQS  F+  H       GR   DI+IYGQESN TTW
Sbjct  179  LLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQ------GRL-DDIAIYGQESNPTTW  231

Query  256  RLAKMNLAIRGIEGQIA--HGDTFHNDKFPDLKADFILANPPFNVSDWGGERLRDDKRWQ  313
            +LAKMNLAIRGI+ +++  ++DTFHND   +LKAD+ILANPPFN SDWG ERL DD RWQ
Sbjct  232  KLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQ  291

Query  314  YGVPPVGNANFAWVQHIVYHLSPTGVAGFVLANGSMSSNQSGEGEIRKNLIEAGLVDCMV  373
            +GVPP GNAN+AW++H++  L+P G AGFVLANGSMS++  +E EIRKNLIE +LV+C+V
Sbjct  292  FGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIV  351

Query  374  ALPGQLFYSTQIPACLWFLARDRSSRPYgaagaapggKFRDRRGEILFIDARKMGRMVDR  433
            +LPGQLFYSTQIP CLWF++ +++             K ++R+ EILFIDAR +G+MV R
Sbjct  352  TLPGQLFYSTQIPVCLWFISNNKGQNG----------K-KERKNEILFIDAREIGHMVSR  400

Query  434  THRELTDEDIAKIASTYHAWRGEKDAGEYQDVPGFCKSATLDEVRKHGYVLTPGRYVGAE  493
            T +E++DEDI K+A TYH+WRG +D   Y+D++GFCK   L+EV+++ Y+LTPGRYVG  
Sbjct  401  TLKEFSDEDIQKVAQTYHSWRGTNDK-YYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLA  459

Query  494  AQEDDSEPFEEKMARLVaqlreqqaeaarlDKAIAANLKELGYG  537
              E+D EPFE+KM R+ ++L EQ A +  L+  I  +L  LGYG
Sbjct  460  DVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYG  503

51) Mrub_2453 in NC_013946


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  533 bits (2010),  Expect = 1e-152, Method: Compositional matrix adjust.
 Identities = 316/524 (61%), Positives = 410/524 (79%), Gaps = 24/524 (4%)

Query  16   ATVGYEAELWKMADTLRGSMDAAEYKHVVLGLIFLKYISDAFEELHRKLEAERAQGADPE  75
            AT+G+E  LW+ AD LRGSMDAAEYK+V LGLIFLKY+SD+FEE  + L  +    AD E
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPY--ADEE  59

Query  76   DPDEYRAQNIFWVPPEARWAHLKAQARQPTIGQLVDNAMACIERDNPALKGVLPKEYARP  135
            D DEY A+NIFWVP EARW  ++ +A++P IGQL+D+AM  IE++N +LKGVLPKEYARP
Sbjct  60   DQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARP  119

Query  136  ALDKTRLGQLIDLISNIKVGDEEARAKDVLGRVYEYFLSQFASAEGKKGGEFYTPRCVVK  195
            ALDK +LG++IDL++ +K+GD E+R +DVLGRVYEYF+++FASAEGK++GEFYTP  +VK
Sbjct  120  ALDKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVK  178

Query  196  LLVEMLEPYHGRVYDPCCGSAGMFVQSVEFIRAHATGNGNGGRAKADISIYGQESNYTTW  255
            LLVEM+EPY GR+YDPCCGS+GMFVQS  F+  H       GR   DI+IYGQESN TTW
Sbjct  179  LLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQ------GRL-DDIAIYGQESNPTTW  231

Query  256  RLAKMNLAIRGIEGQIA--HGDTFHNDKFPDLKADFILANPPFNVSDWGGERLRDDKRWQ  313
            +LAKMNLAIRGI+ +++  ++DTFHND   +LKAD+ILANPPFN SDWG ERL DD RWQ
Sbjct  232  KLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQ  291

Query  314  YGVPPVGNANFAWVQHIVYHLSPTGVAGFVLANGSMSSNQSGEGEIRKNLIEAGLVDCMV  373
            +GVPP GNAN+AW++H++  L+P G AGFVLANGSMS++  +E EIRKNLIE +LV+C+V
Sbjct  292  FGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIV  351

Query  374  ALPGQLFYSTQIPACLWFLARDRSSRPYgaagaapggKFRDRRGEILFIDARKMGRMVDR  433
            +LPGQLFYSTQIP CLWF++ +++             K ++R+ EILFIDAR +G+MV R
Sbjct  352  TLPGQLFYSTQIPVCLWFISNNKGQNG----------K-KERKNEILFIDAREIGHMVSR  400

Query  434  THRELTDEDIAKIASTYHAWRGEKDAGEYQDVPGFCKSATLDEVRKHGYVLTPGRYVGAE  493
            T +E++DEDI K+A TYH+WRG +D   Y+D++GFCK   L+EV+++ Y+LTPGRYVG  
Sbjct  401  TLKEFSDEDIQKVAQTYHSWRGTNDK-YYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLA  459

Query  494  AQEDDSEPFEEKMARLVaqlreqqaeaarlDKAIAANLKELGYG  537
              E+D EPFE+KM R+ ++L EQ A +  L+  I  +L  LGYG
Sbjct  460  DVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYG  503

52) Cabther_B0498 in NC_016025


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  531 bits (2002),  Expect = 5e-152, Method: Compositional matrix adjust.
 Identities = 311/509 (62%), Positives = 404/509 (80%), Gaps = 22/509 (4%)

Query  2    ADALRGSMDAAEYKHVVLGLIFLKYISDAFEEQHARLEAERDQGADPEDPDEYRAENIFW  61
            AD LRGSMDAAEYK+V LGLIFLKY+SD+FEE+   L   +D  AD ED DEY AENIFW
Sbjct  14   ADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELK--QDPYADEEDQDEYLAENIFW  71

Query  62   VPPEARWAHLKAQAKQPTIGQLVDDAMAAIERDNPALKGVLPKDYARPALDKQRLGQLID  121
            VP EARW  ++ +AK+P IGQL+D AM AIE++N +LKGVLPK+YARPALDK++LG++ID
Sbjct  72   VPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEKLGDIID  131

Query  122  LISNIKVGDEESRAKDVLGRVYEYFLSQFASAEGKKGGEFYTPRCVVKLLVEMLEPYRGR  181
            L++ +K+GD ESR +DVLGRVYEYF+++FASAEGK++GEFYTP  +VKLLVEM+EPY+GR
Sbjct  132  LFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGR  190

Query  182  VYDPCCGSAGMFVQSVEFIRAHASgngnggkakaDISIYGQESNYTTWRLAKMNLAIRGI  241
            +YDPCCGS+GMFVQS  F+  H +  +       DI+IYGQESN TTW+LAKMNLAIRGI
Sbjct  191  IYDPCCGSGGMFVQSERFVEKHQGRLD-------DIAIYGQESNPTTWKLAKMNLAIRGI  243

Query  242  DGQIA--HGDTFHNDRFQDLKADYILANPPFNVSDWGGERLRDDKRWKYGVPPAGNANFA  299
            D +++  ++DTFHND  ++LKADYILANPPFN SDWG ERL DD RW++GVPP GNAN+A
Sbjct  244  DNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYA  303

Query  300  WVQHIIHHLAPAGVAGFVLANGSMSSNQSGEGEIRKNIIEADLVDCMVALPGQLFYSTQI  359
            W++H+I  LAP G AGFVLANGSMS++  +E EIRKN+IE DLV+C+V+LPGQLFYSTQI
Sbjct  304  WIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQI  363

Query  360  PACLWFLARDRRGGSPTRPMRDRRGEILFIDARKMGRMVDRTHRELTDDDIARIANTYHA  419
            P CLWF++ ++         ++R+ EILFIDAR +G+MV RT +E++D+DI ++A+TYH+
Sbjct  364  PVCLWFISNNK----GQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHS  419

Query  420  WRTVGARHDSPLPEYRDIPSFCKSATLEEVRKHGYVLTPGRYVGAAEQEEDDEPFDQKMQ  479
            WR    +       Y DI++FCK   LEEV+++ Y+LTPGRYVG A+ EED+EPF+QKM+
Sbjct  420  WRGTNDKY------YEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMK  473

Query  480  RLVAQLREQQaeaakldaaiaaNLKELGF  508
            R+ ++L EQ A +  L+  I  +L  LG+
Sbjct  474  RITSELSEQFAKSKELEDQIRKSLEGLGY  502

53) PGA2_c07360 in NC_018286


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  526 bits (1983),  Expect = 2e-150, Method: Compositional matrix adjust.
 Identities = 290/495 (59%), Positives = 389/495 (79%), Gaps = 10/495 (2%)

Query  23   MRGGLEPSEYKHVALGLIFLKYISEAFQAMHDQLAKDDFADPEDPEEYLAENIFWVPETA  82
            +RG+++++EYK+VALGLIFLKY+S++F+    +L +D +AD ED +EYLAENIFWVP  A
Sbjct  17   LRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDEYLAENIFWVPKEA  76

Query  83   RWSFIQDNARSENIGKIIDDAMEAIEAEPTNETLKGVLPKNYARPTLDKTMLGELVDLFS  142
            RW +I+DNA+  +IG++ID AM AIE E  NE+LKGVLPK+YARP+LDK  LG+++DLF+
Sbjct  77   RWQYINDNAKKPEIGQLIDKAMIAIEKE--NESLKGVLPKEYARPALDKEKLGDIIDLFT  134

Query  143  NVKMHDSADRARDLLGRVYEYFISGFASAEGKRGGEFFTPRSVVRTLVEMLEPYQGRVYD  202
              K+ D+  R +D+LGRVYEYFI+ FASAEGK +GEF+TP S+V+ LVEM+EPY+GR+YD
Sbjct  135  -FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYD  193

Query  203  PCCGSGGMFIQSEKFIEDHGGNPLNLSVYGQEINHTTWRLAKMNLAVHGIDADIAWDSAG  262
            PCCGSGGMF+QSE+F+E H G   ++++YGQE N TTW+LAKMNLA++GID D++  +A+
Sbjct  194  PCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGIDNDLGERNAD  253

Query  263  SFHKDAHPGLKADYILANPPFNISDWGGERLLEDDRWQYGPPPKGNANFAWIQHIIHHLA  322
            +FH+D H GLKADYILANPPFN SDWG ERLL+D RWQ+G PPKGNAN+AWI+H+I  LA
Sbjct  254  TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWIEHMISKLA  313

Query  323  PRGHAGVVLANGSMSSQTSGEGEIRKRLIEEDRVDCMVALPGQLFYSTQIPVCLWILSRD  382
            P G AG VLANGSMS+   +E EIRK LIE+D V+C+V+LPGQLFYSTQIPVCLW++S +
Sbjct  314  PNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNN  373

Query  383  KSANGLRDRRGEVLFIDARNMGHMVDRVRREFSDEDIERIAGTYRRWRAKPETLEAKGWE  442
            K+ NG ++R+ E+LFIDAR++GHMV R  +EFSDEDI+++A TY+ WR+  +        
Sbjct  374  KGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGTNDKY------  427

Query  443  AYADEPGFCKSEGLETIRKFDHVLTPGRYVGAAEDEGDGVPFEEKFGDLVSKWETQSSES  502
             Y D +GFCK   LE +++ + +LTPGRYVG A+ E D  PFE+K   + S    Q + S
Sbjct  428  -YEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKS  486

Query  503  RKLDDKIGALLKTVA  517
            + L+D+I   L  ++
Sbjct  487  KELEDQIRKSLEGLG  501

54) Thein_1578 in NC_015681


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  525 bits (1979),  Expect = 4e-150, Method: Compositional matrix adjust.
 Identities = 306/519 (59%), Positives = 414/519 (80%), Gaps = 19/519 (3%)

Query  45   ALLGFEAKLWEAANALRGSMDAAEYKHVVLGLIFLKYISDAFEEHRKRLEQEPYADPEDP  104
            A +GFE KLW+AA+ LRGSMDAAEYK+V LGLIFLKY+SD+FEE  K L Q+PYAD ED 
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  105  DEYRAANVFWVPPEARWERLKQNARRPEIGQIVDEAMEALERENPSLKGVLPKDYARPAL  164
            DEY A N+FWVP EARW+ +++NA++PEIGQ++D AM A+E+EN SLKGVLPK+YARPAL
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  165  DKQRLGQLIDLITNIRLEGEEARGKDVLGRVYEYFLGQFASAEGRKGGEFYTPASVVKLL  224
            DK++LG++IDL+T ++L + E+R +DVLGRVYEYF+++FASAEG+++GEFYTP+S+VKLL
Sbjct  122  DKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  225  VEMLEPFEGRVYDPCCGSGGMFVQSVRFVEAHATgngnggrararISIYGQELNYTTWRL  284
            VEM+EP+ GR+YDPCCGSGGMFVQS RFVE H             I+IYGQE N TTW+L
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQG-------RLDDIAIYGQESNPTTWKL  233

Query  285  CKMNLAIRGIEGKIEQ--GDTFLNDRFPDLKADYILANPPFNMKNWGAEQLRHDKRWKYG  342
             KMNLAIRGI+  + +  +DTF ND   +LKADYILANPPFN  +WG E+L +D RW++G
Sbjct  234  AKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFG  293

Query  343  LPPARNANFAWLQHMIHHLSPVGYAGVVLANGSLSSNQSNEGEIRKNIVEADLVDCIVAL  402
            +PP  NAN+AW++HMI  L+P G AG VLANGS+S++  +E EIRKN++E DLV+CIV+L
Sbjct  294  VPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTL  353

Query  403  PDKLFYTTQIPACLWFLTRDKSGRPPAGQKKRLRDRRGEVLFIDARKMGVMVDRVHRELT  462
            P++LFY+TQIP CLWF++ +K      GQ+ + ++R+ E+LFIDAR +G MV R  +E++
Sbjct  354  PGQLFYSTQIPVCLWFISNNK------GQNGK-KERKNEILFIDAREIGHMVSRTLKEFS  406

Query  463  DEEIEKIARTYHAWRAEDGAGEYKDIPGFCISATIEKIRREHDYILTPGRYVGVeiqeed  522
            DE+I+K+A+TYH+WR+ ++   Y DI+GFC    +E + ++++YILTPGRYVG+   EED
Sbjct  407  DEDIQKVAQTYHSWRGTNDK-YYEDIAGFCKVVNLEEV-KNNEYILTPGRYVGLADVEED  464

Query  523  deifeeKMKRLVAELEAQFSEGAKLEEAIKRNLRELGFG  561
            +E FE+KMKR+ +EL  QF+ +  LE+ I+++L  LG+G
Sbjct  465  EEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYG  503

55) GLX_22350 in NC_016027


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  524 bits (1977),  Expect = 6e-150, Method: Compositional matrix adjust.
 Identities = 291/518 (57%), Positives = 394/518 (77%), Gaps = 23/518 (4%)

Query  19   AIEATLWAAADKLRGNMDAAEYKHVALGLIFLKYISDRFDERRAQAEADPEERDLVEERD  78
            ++E  LW AADKLRG+MDAAEYK+VALGLIFLKY+SD F+E+  +   DP   +  E++D
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADE--EDQD  62

Query  79   LYLGDNVFWVPAEARWTFLKENATSVDPSIGSLIDRAMIALETENPSLKGVLTKNYARPE  138
             YL++N+FWVP EARW ++++NA    P IG LID+AMIA+E EN SLKGVL K+YARP 
Sbjct  63   EYLAENIFWVPKEARWQYINDNAKK--PEIGQLIDKAMIAIEKENESLKGVLPKEYARPA  120

Query  139  LDQIRLGEVVKLFSDLAFK---DAHHGQDMLGRVYEYFLGQFAIAEGKRGGQFYTAGCIV  195
            LD+ +LG+++ LF+   FK      + QD+LGRVYEYF+++FA AEGK +G+FYT++ IV
Sbjct  121  LDKEKLGDIIDLFT---FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIV  177

Query  196  RLLVEMIQPFKGRVYDPCCGSGGMFVQSERFVEAHSTQYVDPVKAKRELSIFGQESNPTT  255
            +LLVEMI+P+KGR+YDPCCGSGGMFVQSERFVE H  +         +++I+GQESNPTT
Sbjct  178  KLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRL-------DDIAIYGQESNPTT  230

Query  256  WRLAKMNLAIRGIEADLGPKWADSFLEDLHPGLKADFVLANPPFNDSDWGGERARTGQSW  315
            W+LAKMNLAIRGI+ DLG + AD+F +DLH GLKAD++LANPPFN SDWG ER   +  W
Sbjct  231  WKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRW  290

Query  316  PYGVPPAGNANFAWVQLFIRHLAPHGVAGFVLANGSLSSQQSGEGDIRRAIIEADLVDCI  375
             +GVPP GNAN+AW++  I  LAP+G AGFVLANGS+S+   +E +IR+ +IE DLV+CI
Sbjct  291  QFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECI  350

Query  376  VSLPGQLFSTTQIPVCLWFLARDKSNGLVKDKTLRDRRRETLFIDARGLGTMQSRTLKVL  435
            V+LPGQLF +TQIPVCLWF++ +K+     ++  ++R+ E LFIDAR +G M SRTLK +
Sbjct  351  VTLPGQLFYSTQIPVCLWFISNNKG-----QNGKKERKNEILFIDAREIGHMVSRTLKEF  405

Query  436  SEADIAKVADTYHAWREKGGRYVDE-PGFSSMATTAEIAGKCYVLTPGRYVGTVAADEED  494
            S+ DI KVA+TYH+WR   ++Y ++ +GF  +    E+  + Y+LTPGRYVG    +E++
Sbjct  406  SDEDIQKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDE  465

Query  495  ETFDAKMQRLTATLREQMAEGAKLDERIRSALAGVGYG  532
            E F+ KM+R+T+ L EQ A +  L+++IR +L G+GYG
Sbjct  466  EPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYG  503

56) Veis_3128 in NC_008786


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  521 bits (1964),  Expect = 6e-149, Method: Compositional matrix adjust.
 Identities = 293/510 (58%), Positives = 407/510 (80%), Gaps = 7/510 (1%)

Query  9    GNLGFEAELFKTADKLRGNMEPSDYKHVALGLIFLKYISDAFEARHaqllaedaaaaedk  68
            + +GFE  L ++ADKLRG+M++++YK+VALGLIFLKY+SD+FE +  +L  +  A  ED+
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  69   deyladNIFWVPREARWSHLQANAKQSSIGTLIDDAMRAIERDNESLKGVLPKDYARPAL  128
            DEYLA+NIFWVP+EARW  ++ NAK++ IG LID AM AIE++NESLKGVLPK+YARPAL
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  129  NKVMLGELIDLISGIALNEGNDKSKDVLGRVYEYFLGQFAGAEGKRGGEFYTPRSVVRTL  188
            +K  LG++IDL++ + L + + + +DVLGRVYEYF+++FA+AEGK +GEFYTP S+V+ L
Sbjct  122  DKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  189  VEMLEPYTGRVYDPCCGSGGMFVQSEKFVAEHGGRIGDIAIYGQESNYTTWRLAKMNLAV  248
            VEM+EPY GR+YDPCCGSGGMFVQSE+FV  H GR++DIAIYGQESN TTW+LAKMNLA+
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240

Query  249  RGIDSDIKWNNEGSFHKDELRDLKADFILANPPFNISDWGGGRLREDVRWAFGAPPAGNA  308
            RGID+D+   N ++FH+D  ++LKAD+ILANPPFN SDWG  RL +D RW FG PP GNA
Sbjct  241  RGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNA  300

Query  309  NYAWLQHIFHHLSPHGFAGVVLANGSMSSQQSGEGDIRKAMIEANVVDCMVALPGQLFYS  368
            NYAW++H++  L+P+G AG VLANGSMS+   +E +IRK +IE ++V+C+V+LPGQLFYS
Sbjct  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360

Query  369  TQIPACLWILSKDRSNGLVKKTKLRDRRGEVLFIDARKMGVLVDRTRRELTNEEIGRIAA  428
            TQIP CLW++S+++++        ++R+ E+LFIDAR +G +V RT +E+++E+I ++A 
Sbjct  361  TQIPVCLWFISNNKGQ-----NGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQ  415

Query  429  TYHAWRGEADAGEYSDIPGFCKSATLDAIRKHDHVLTPGRYVGAEAQEDDGEAFADKMQR  488
            TYH+WRG  D   Y DI+GFCK   L+ +++++ +LTPGRYVG    E+D E+F +KM+R
Sbjct  416  TYHSWRGTNDK-YYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKR  474

Query  489  LTTQLFEKTKRGAELDAVICEKLGALGYGV  518
            +T++L E+  ++ EL+  I   L +LGYGV
Sbjct  475  ITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

57) HMPREF0659_A6123 in NC_014370


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  517 bits (1950),  Expect = 8e-148, Method: Compositional matrix adjust.
 Identities = 289/503 (58%), Positives = 392/503 (78%), Gaps = 9/503 (1%)

Query  7    ADIGFEKEIWKAADLLRGNLDASEYKSVVLGLIFLKYISDKFETKYQELVNNGEGFEEDR  66
            A IGFE  +W+AAD LRG++DA+EYK+V LGLIFLKY+SD FE KY+EL ++  + EED+
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  67   DEYMADNIFFVPQEARWSVVAKAAHTPEIGTIIDNAMRLIEKENLRLKGILPKNFARPEL  126
            DEY+A+NIF VP+EARW  +   A  PEIG +ID+AM  IEKEN  LKG+LPK++ARP L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  127  DKRRLGDVVDLFTNIQMKEHGDSKDILGRTYEYCLSKFAEAEGKLAGEFYTPACIVQTLV  186
            DK +LGD++DLFT      ++  +D+LGR YEY ++KFA AEGK AGEFYTP+ IV+ LV
Sbjct  122  DKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  187  EVLKPYHGRVYDPACGSGGMFVQSAKFIERHQGNIKDISVYGQDSNPTTWKMAQMNLAIR  246
            E++ PY GR+YDP CGSGGMFVQS +F+E+HQG + DI++YGQ+SNPTTWK+A+MNLAIR
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  247  GIEADLGKFNADTFFDDQHPTLKADFIMANPPFNLSDWGADKLQDDVRWKFGIPPSGNAN  306
            GI+ DLG  NADTF +D H  LKAD+I+ANPPFN SDWG ++L DD RW+FG+PP GNAN
Sbjct  242  GIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNAN  301

Query  307  FAWLQHMIHHLSPKGKIGMVLANGSLSSQTGGEGTIRENIIKADLIEGIVALPSQLFYTT  366
            +AW++HMI  L+P+G  G VLANGS+S+   +E  IR N+I  DL+E IV+LP+QLFY+T
Sbjct  302  YAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYST  361

Query  367  GIPVSLWFLNREKKQ------KDKILFVDARNMGTMVTRKLRELQEADIRKIADTFDKYS  420
             IPV LWF++ +K Q      K+ ILF+DAR++G MV+R L+E+ + DI+K+A+T++   
Sbjct  362  QIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWR  421

Query  421  DGT---LENEKGFCAVVALGDVAKQDYILTPGRYVGIAEQEDDGIPFQEKMDKLTTELSD  477
            +      E+  GFC VV L +V +++YILTPGRYVG+A+ E+D  PF++KM ++T+ELS+
Sbjct  422  GTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSE  481

Query  478  LFAQSHDLEDEIRKQLASIGFTI  500
             FA+S +LED+IRK L ++G+ +
Sbjct  482  QFAKSKELEDQIRKSLEGLGYGV  504

58) hsdM-1 in NC_002932


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  516 bits (1946),  Expect = 2e-147, Method: Compositional matrix adjust.
 Identities = 306/517 (60%), Positives = 404/517 (79%), Gaps = 16/517 (3%)

Query  13   GNLGFEAELFKAADKLRGNMEPSDYKHVALGLIFLKYISDAFeakhkallaedalaaedk  72
            + +GFE  L +AADKLRG+M++++YK+VALGLIFLKY+SD+FE K K L  +     ED+
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  73   deyladNVFWVPKEARWSHLQANAKQPTIGTLIDDAMRAIEKDNASLKGVLPKDYARPAL  132
            DEYLA+N+FWVPKEARW  ++ NAK+P IG LID AM AIEK+N SLKGVLPK+YARPAL
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  133  NKVMLGELIDLISGIGHLLPSPSGRGAGGEGQSFDILGRVYEYFLGQFAGAEGKRGGEFY  192
            +K  LG++IDL++     L    +R         D+LGRVYEYF+++FA+AEGK +GEFY
Sbjct  122  DKEKLGDIIDLFT---FKLGDTESRKQ-------DVLGRVYEYFIAKFASAEGKNAGEFY  171

Query  193  TPRSVVRVLVEMLEPYSGRVYDPCCGSGGMFVQSEKFVQEHGGRIGDIAIYGQESNYTAW  252
            TP S+V++LVEM+EPY GR+YDPCCGSGGMFVQSE+FV+ H GR++DIAIYGQESN T+W
Sbjct  172  TPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTW  231

Query  253  RLAKMNLAVRGIDADIRWNNEGSFHKDELRDLKADYILANPPFNISDWGGDRLREDVRWQ  312
            +LAKMNLA+RGID D+   N ++FH+D  ++LKADYILANPPFN SDWG +RL +D RWQ
Sbjct  232  KLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQ  291

Query  313  FGVPPVGNANYAWLQHIYWHLAPNGTAGVVLANGSMSSNQSGEGEIRRAMLEADAVDCMV  372
            FGVPP GNANYAW++H+   LAPNGTAG VLANGSMS++  +E EIR+ ++E D V+C+V
Sbjct  292  FGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIV  351

Query  373  ALPGQLFYSTQIPACLWFLARNKNPANGKTGGLRDRRGHVLFIDARKMGVLVDRTRRELS  432
            +LPGQLFYSTQIP CLWF++ NK        G ++R+ ++LFIDAR +G +V RT +E+S
Sbjct  352  TLPGQLFYSTQIPVCLWFISNNKGQ-----NGKKERKNEILFIDAREIGHMVSRTLKEFS  406

Query  433  DEEIQKIARTYHAWRGEPDAGDYADVAGFCKSATLDEIRKHGHVLTPGRYVGAAEVEDDG  492
            DE+IQK+A+TYH+WRG  D   Y D+AGFCK   L+E++++  +LTPGRYVG A+VE+D 
Sbjct  407  DEDIQKVAQTYHSWRGTNDK-YYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDE  465

Query  493  EPFEEKMARLAAQWRQQRDEAAKLDAAIEANLKELGF  529
            EPFE+KM R++++  +Q   +  L+  I  +L  LG+
Sbjct  466  EPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGY  502

59) SFBM_0018 in NC_015913


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  514 bits (1940),  Expect = 5e-147, Method: Compositional matrix adjust.
 Identities = 289/503 (58%), Positives = 397/503 (79%), Gaps = 10/503 (1%)

Query  9    ASISFEQQIWSAADILRGNMDAAEYKHVVLGLIFLKYISDSFERRYQELLRdd-ddvedk  67
            A+I+FE+++W AAD LRG+MDAAEYK+V LGLIFLKY+SDSFE +Y+EL +D   D ED+
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  68   dAYTEVNVFFVPPEARWSVIQASAHKEEIGIVIDNAMRAIEKENRRLKDILPKNYSREEL  127
            D Y   N+F VP EARW  I+ +A K EIG +ID+AM AIEKEN  LK++LPK+Y+R  L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  128  DKRRLGNVVDLFTNIHMIDHGRDKDILGRTYEYCLSKFAEQEGKRAGEFYTPSCIVRTLV  187
            DK +LG+++DLFT      ++R +D+LGR YEY ++KFA  EGK AGEFYTPS IV+ LV
Sbjct  122  DKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  188  EILEPFNGRVYDPCCGSGGMFVQSAKFVEHHSGNINNLSIFGQDSNPTTRKMAIMNLAIR  247
            E++EP++GR+YDPCCGSGGMFVQS +FVE H G +++++I+GQ+SNPTT+K+A MNLAIR
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  248  GIEGDIGPHSADTFYNDLHKTLKADFILSNPPFNLSNWNDGSLNDDVRWSYGLPPSGNAN  307
            GI+ D+G ++ADTF NDLHK LKAD+IL+NPPFN S+W +  L DD RW +G+PP GNAN
Sbjct  242  GIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNAN  301

Query  308  FSWLQHMIHHLSPRGKIGMVLANGSLSSKSGGEGDIRKGIIEDDLVEGIVAMPSQLFYTT  367
            ++W++HMI  L+P G  G VLANGS+S+ + +E +IRK +IE+DLVE IV++P+QLFY+T
Sbjct  302  YAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYST  361

Query  368  QIPVSLWIINRDKSQKGKT------LFIDARDMGKMVNRKLREMTEEDIKKISDTF---R  418
            QIPV LW+I+ +K+Q+GK       LFIDAR++G MV+R L+E ++EDI+K+++T+   R
Sbjct  362  QIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWR  421

Query  419  AFEEGTLEDVKGFCAVATTEKISKEDYILTPGRYVGIKDREDDSEGFDDKMKRLTGELRE  478
            + ++   ED+ GFC V   E + +++YILTPGRYVG+ D E+D E F++KMKR+T+EL E
Sbjct  422  GTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSE  481

Query  479  MFNKSHELEEEIRKRLGSIGYEI  501
             F KS ELE++IRK L ++GY +
Sbjct  482  QFAKSKELEDQIRKSLEGLGYGV  504

60) rplK in NC_017294


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  514 bits (1940),  Expect = 5e-147, Method: Compositional matrix adjust.
 Identities = 289/503 (58%), Positives = 397/503 (79%), Gaps = 10/503 (1%)

Query  9    ASISFEQQIWSAADILRGNMDAAEYKHVVLGLIFLKYISDSFERRYQELLRdd-ddvedk  67
            A+I+FE+++W AAD LRG+MDAAEYK+V LGLIFLKY+SDSFE +Y+EL +D   D ED+
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  68   dAYTEVNVFFVPPEARWSVIQASAHKEEIGIVIDNAMRAIEKENRRLKDILPKNYSREEL  127
            D Y   N+F VP EARW  I+ +A K EIG +ID+AM AIEKEN  LK++LPK+Y+R  L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  128  DKRRLGNVVDLFTNIHMIDHGRDKDILGRTYEYCLSKFAEQEGKRAGEFYTPSCIVRTLV  187
            DK +LG+++DLFT      ++R +D+LGR YEY ++KFA  EGK AGEFYTPS IV+ LV
Sbjct  122  DKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  188  EILEPFNGRVYDPCCGSGGMFVQSAKFVEHHSGNINNLSIFGQDSNPTTRKMAIMNLAIR  247
            E++EP++GR+YDPCCGSGGMFVQS +FVE H G +++++I+GQ+SNPTT+K+A MNLAIR
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  248  GIEGDIGPHSADTFYNDLHKTLKADFILSNPPFNLSNWNDGSLNDDVRWSYGLPPSGNAN  307
            GI+ D+G ++ADTF NDLHK LKAD+IL+NPPFN S+W +  L DD RW +G+PP GNAN
Sbjct  242  GIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNAN  301

Query  308  FSWLQHMIHHLSPRGKIGMVLANGSLSSKSGGEGDIRKGIIEDDLVEGIVAMPSQLFYTT  367
            ++W++HMI  L+P G  G VLANGS+S+ + +E +IRK +IE+DLVE IV++P+QLFY+T
Sbjct  302  YAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYST  361

Query  368  QIPVSLWIINRDKSQKGKT------LFIDARDMGKMVNRKLREMTEEDIKKISDTF---R  418
            QIPV LW+I+ +K+Q+GK       LFIDAR++G MV+R L+E ++EDI+K+++T+   R
Sbjct  362  QIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWR  421

Query  419  AFEEGTLEDVKGFCAVATTEKISKEDYILTPGRYVGIKDREDDSEGFDDKMKRLTGELRE  478
            + ++   ED+ GFC V   E + +++YILTPGRYVG+ D E+D E F++KMKR+T+EL E
Sbjct  422  GTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSE  481

Query  479  MFNKSHELEEEIRKRLGSIGYEI  501
             F KS ELE++IRK L ++GY +
Sbjct  482  QFAKSKELEDQIRKSLEGLGYGV  504

61) XF2742 in NC_002488


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  513 bits (1935),  Expect = 1e-146, Method: Compositional matrix adjust.
 Identities = 286/470 (61%), Positives = 386/470 (83%), Gaps = 3/470 (0%)

Query  18   FEAELFKAADKLRGNMEPSDYKHVALGLIFLKYISDAFEAKHSallaedaqaaedkdeYL  77
            FE  L +AADKLRG+M++++YK+VALGLIFLKY+SD+FE K   L  +     ED+DEYL
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDEYL  65

Query  78   AHNVFWVPKQARWSHLKANAKQSTIGTLIDEAMRDIEKDNPSLKHVLPKDYARPALNKVM  137
            A+N+FWVPK+ARW  ++ NAK++ IG LID AM  IEK+N SLK VLPK+YARPAL+K  
Sbjct  66   AENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEK  125

Query  138  LGELIDLISGIALNEEGARSKDILGRVYEYFLGQFAGAEGKRGGEFYTPRSVVRVLVQML  197
            LG++IDL++ + L +  +R +D+LGRVYEYF+++FA+AEGK +GEFYTP S+V++LV+M+
Sbjct  126  LGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMI  184

Query  198  EPYSGRVYDPCCGSGGMFVQSEKFVLEHGGRIGDIAIYGQESNYTTWRLAKMNLAVRGID  257
            EPY GR+YDPCCGSGGMFVQSE+FV  H GR++DIAIYGQESN TTW+LAKMNLA+RGID
Sbjct  185  EPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGID  244

Query  258  SDIRWNNEGSFHNDALRDLKADYILANPPFNISDWGGDRLREDVRWKFGVPPAGNANYAW  317
            +D+   N ++FHND  ++LKADYILANPPFN SDWG +RL +D RW+FGVPP GNANYAW
Sbjct  245  NDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAW  304

Query  318  LQHIYHHLAPNGTAGVVLANGSMSSNHSGEGEIRTHMIEADIVDCMIAMPGQLFYSTQIP  377
            ++H+   LAPNGTAG VLANGSMS++  +E EIR ++IE D+V+C++++PGQLFYSTQIP
Sbjct  305  IEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIP  364

Query  378  ACLWFLARNKNPGKGLRDRRGQVLLMDARALGVLVDRTRRELTDEHIQQIADTYHAWRGE  437
             CLWF++ NK   +G ++R+ ++L++DAR +G +V RT +E++DE+IQ++A+TYH+WRG 
Sbjct  365  VCLWFISNNKGQ-NGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGT  423

Query  438  QGAAAYADVAGFCKSATLEDIRKQGYVLTPGRYVGAVEREDDGEPFPQKM  487
            ++   Y D+AGFCK   LE+++++ Y+LTPGRYVG  + E+D EPF QKM
Sbjct  424  ND-KYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKM  472

62) hsdM in NC_021499


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  513 bits (1934),  Expect = 2e-146, Method: Compositional matrix adjust.
 Identities = 301/524 (58%), Positives = 407/524 (78%), Gaps = 22/524 (4%)

Query  13   GNLGFEAELFKAADKLRGNMEPSDYKHVALGLIFLKYISDAFEAKRkallaedaqaaedk  72
            + +GFE  L +AADKLRG+M++++YK+VALGLIFLKY+SD+FE K K L  +     ED+
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  73   deYLADNVFWVPKEARWSHLQANAKLPTIGTLIDDAMRSIEKDNESLKGVLPKDYARPAL  132
            DEYLA+N+FWVPKEARW  ++ NAK P IG LID AM +IEK+NESLKGVLPK+YARPAL
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  133  NKVMLGELIDLISGIALNEEGDRSKDILGRVYEYFLGQFAGAEGKRGGEFYTPRSVVRVL  192
            +K  LG++IDL++ + L +   R +D+LGRVYEYF+++FA+AEGK +GEFYTP S+V++L
Sbjct  122  DKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  193  VEMLEPLPDPARGVAGRVYDPCCGSGGMFVQSEKFVQEHGGRIGDIAIYGQESNYVTWRL  252
            VEM+EP         GR+YDPCCGSGGMFVQSE+FV+ H GR++DIAIYGQESN  TW+L
Sbjct  181  VEMIEPYK-------GRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKL  233

Query  253  AKMNLAVRGIDSKIFWNNEGSFHKDEFAAQRGGDGAPMKADFILANPPFNISDWGGDRLR  312
            AKMNLA+RGID+ +   N ++FH+D    ++G     +KAD+ILANPPFN SDWG +RL 
Sbjct  234  AKMNLAIRGIDNDLGERNADTFHND---LHKG-----LKADYILANPPFNASDWGQERLL  285

Query  313  EDVRWKFGVPPVGNANYAWLQHIYHHLAPNGTAGVVLANGSMSSNQSGEGEIRKAMIEAD  372
            +D RW+FGVPP GNANYAW++H+   LAPNGTAG VLANGSMS++  +E EIRK +IE D
Sbjct  286  DDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQD  345

Query  373  AVDCMVALPGQLFYSTQIPACLWFLARNKNPASGKAGGLRDRRGQVLFIDARKLGVLVDR  432
             V+C+V+LPGQLFYSTQIP CLWF++ NK        G ++R+ ++LFIDAR +G +V R
Sbjct  346  LVECIVTLPGQLFYSTQIPVCLWFISNNKGQ-----NGKKERKNEILFIDAREIGHMVSR  400

Query  433  TRRELTDEEIQRIADTYHAWRGEEGAGEYADVAGFCKSASIEDIRKYGHVLTPGRYVGAA  492
            T +E++DE+IQ++A+TYH+WRG ++   Y D+AGFCK  ++E++++   +LTPGRYVG A
Sbjct  401  TLKEFSDEDIQKVAQTYHSWRGTNDK-YYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLA  459

Query  493  EQEDDGEPFDEKMLRLSAQWREHRAAAAKLDTAIEANLKELGYG  536
            + E+D EPF++KM R++++  E+ A +  L+  I  +L  LGYG
Sbjct  460  DVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYG  503

63) SYN_00494 in NC_007759


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  510 bits (1922),  Expect = 1e-145, Method: Compositional matrix adjust.
 Identities = 292/505 (58%), Positives = 393/505 (78%), Gaps = 7/505 (1%)

Query  8    TEAFEKTLFKAADKLRKNMDAAEYKHIVLGLIFLKYISDSFEALYEKIKEGKGDFEGADP  67
            T +FE  L +AADKLR +MDAAEYK++ LGLIFLKY+SDSFE  Y  +K++   +  AD 
Sbjct  3    TIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDP--Y--ADE  58

Query  68   EDPDEYRAENVFFVPQAARWSYLHSRAKLPSIGKDVDDAMEAIEKENQTLKGILPQVYAR  127
            ED DEY AEN+F VP+ ARW Y++  AK P IG+ +D AM AIEKEN++LKG+LP+ YAR
Sbjct  59   EDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYAR  118

Query  128  PNLDKAALGGLIDLVGNIALGTEAAKAKDLLGRVYEYFLGEFANAEGKKGGQFYTPKSIV  187
            P LDK  LG++IDL   + LG   ++ +D+LGRVYEYF++ FA+AEGK++G+FYTP SIV
Sbjct  119  PALDKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIV  177

Query  188  RLMVEMIEPFKGRVYDPCCGSGGMFIMSERFVENHQGKVDDISIFGQESNQTTYRLCRMN  247
            +L+VEMIEP+KGR+YDPCCGSGGMF+ SERFVE+HQG++DDI+I+GQESN TT +L +MN
Sbjct  178  KLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMN  237

Query  248  LAIRGIDGSQVKWNTEGSFLNDVHKDLKSDFILANPPFNDSDWSGQLLQSDPRWKYGVPQ  307
            LAIRGID     +N++ +F ND+HK+LK+D+ILANPPFN SDW+ + L  D RW++GVP 
Sbjct  238  LAIRGIDNDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPP  296

Query  308  AANANFAWLQHMIYHLSPKGIMACVLANGSLSSQTNNEGEIRKSLVENDLVDCIVALPKQ  367
             +NAN+AW++HMI  L+P+G  + VLANGS+S+  ++E EIRK+L+E+DLV+CIV+LP Q
Sbjct  297  KGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQ  356

Query  368  LFYNTGIPACLWFLSRKRAGNGDRKRSSEILFIDASEEGFMEDRTHRAFSDDDIAKIAGT  427
            LFY+T IP CLWF+S +++ NG + R +EILFIDA E G M  RT + FSD+DI K+A T
Sbjct  357  LFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQT  416

Query  428  YHEWRKQGGK-YEDVRGFCKSADIEEITKHNFVLMPGRYVGIKDEEDDGIPFEDKMAGYL  486
            YH WR   +K YED+ GFCK  ++EE+ +++++L PGRYVG+ D E+D  PFE+KM    
Sbjct  417  YHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRIT  476

Query  487  SELSIQMAEEKRLDEEIKKQLGNIG  511
            SELS Q A  K L+++I+K L  +G
Sbjct  477  SELSEQFAKSKELEDQIRKSLEGLG  501

64) Ethha_0469 in NC_014828


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  509 bits (1919),  Expect = 2e-145, Method: Compositional matrix adjust.
 Identities = 290/504 (58%), Positives = 390/504 (78%), Gaps = 11/504 (2%)

Query  7    AETGFEKQIWDAACILRGNMDAAEYKHVILGLIFLKYISDRFEFRYNQLVKDKNGDEEDR  66
            A  GFE ++W+AA  LRG+MDAAEYK+V LGLIFLKY+SD FE +Y++L +D  +DEED+
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  67   DEYTSQNVFYVPPSARWESITAQAHMPEIGKIIDNAMDSIERENKSLKGVLPKTFARPEL  126
            DEY ++N+F VP  ARW+ I  +A  PEIG++ID+AM +IE+EN SLKGVLPK +ARP L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  127  DKRRLGEVVDLFTNITIAETGG-KMDMLGRTYEYCLGRFAEQEGKLAGEFYTPASVVRTL  185
            DK +LG+++DLFT + +++T + K D+LGR YEY +++FA  EGK AGEFYTP+S+V+ L
Sbjct  122  DKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  186  VAVIKPFDGRVYDPCCGSGGMFVQSAEFVKAHAGNIRNLSVYGQDSNPTTWKLCRMNLAI  245
            V +I P+ GR+YDPCCGSGGMFVQS  FV  H G + ++++YGQ+SNPTTWKL +MNLAI
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240

Query  246  HGIDADLGEAAADTFFNDRHPTMKADYILANPPFNLSGWGADKLADDQRWKYGQPPAGNA  305
            +GID DLGE  ADTF ND H  +KADYILANPPFN S+WG ++L DD RW++G PP GNA
Sbjct  241  RGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNA  300

Query  306  NFAWMQHMIFHTSAKGRIGMVLANGSLASQNGGEGAIRKAIVEDDLVEGIIAMPPQLFYT  365
            N+AW++HMI   +++G  G VLANGS+++   +E  IRK ++E+DLVE I+++P QLFY+
Sbjct  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360

Query  366  TQIPVSLWFLDRAKKQPGK------MLFIDARHMGTMVSRRLREMTKEDISKISDTFEAF  419
            TQIPV LWF+   K Q GK      +LFIDAR++G MVSR L+E + EDI K+++T+++ 
Sbjct  361  TQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSW  420

Query  420  ENGT---LEDEAGFCAAVPVEEISKQDYILTPGRYVGLAAEEDDCEPFEEKMDRLTSELS  476
                    ED AGFC  V +EE+ +++YILTPGRYVGLA  E+D EPFE+KM R+TSELS
Sbjct  421  RGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELS  480

Query  477  EMFKRSHELEEEIRKRLGAIGYDI  500
            E F +S ELE++IRK L ++GY++
Sbjct  481  EQFAKSKELEDQIRKSLEGLGYGV  504

65) Shel_17670 in NC_013165


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  508 bits (1915),  Expect = 4e-145, Method: Compositional matrix adjust.
 Identities = 296/502 (59%), Positives = 399/502 (80%), Gaps = 9/502 (1%)

Query  10   AEIGFEQQIWSAADKLRGNMDASEYKNVVLGLIFLKYISDKFEQRYQELVdegegfeedr  69
            A IGFE+++W AADKLRG+MDA+EYKNV LGLIFLKY+SD FE++Y+EL ++  + EED+
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  70   deYTYKNIFFVPPEARWGVIAGAAHTPEIGKAIDNAMRLIEAENDKLKNILPKNFARQEL  129
            DEY   NIF VP EARW  I + A  PEIG+ ID+AM  IE EN+ LK +LPK++AR  L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  130  DKRRLGEVVDLFTNVQMAEKGDTRDILGRTYEYCLSKFAEAEGKNAGEFYTPACVVRTLV  189
            DK +LG+++DLFT       +  +D+LGR YEY ++KFA AEGKNAGEFYTP+ +V+ LV
Sbjct  122  DKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  190  EIIEPYRGRVYDPCCGSGGMFVQSAQFVKNHQGRIDDLSVYGQESNPTTWKMAMMNLAIR  249
            E+IEPY+GR+YDPCCGSGGMFVQS +FV +HQGR+DD+++YGQESNPTTWK+A MNLAIR
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  250  GIDADLGTFNADTFFNDIHKNERFDFVLANPPFNMSDWGGEQLKEDPRWDFGTPPAGNAN  309
            GID DLG  NADTF ND+HK  + D++LANPPFN SDWG E+L +D RW+FG PP GNAN
Sbjct  242  GIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNAN  301

Query  310  FAWMQHMIHHLADDGRMGMVLANGSLSSQTNNEGAIRQKIVDAGLVEGIVAMPDRLFYST  369
            +AW++HMI  LA +G  G VLANGS+S+  ++E  IR+++++ +LVE IV++P++LFYST
Sbjct  302  YAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYST  361

Query  370  GIPVSLWIISK----ESNRQRRT--LFVDAREMGTMVSRRLREFTDEDIAKVAETFDAFR  423
             IPV LW+IS+    +++++R+   LF+DARE+G MVSR L+EF+DEDI KVA+T+++ R
Sbjct  362  QIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWR  421

Query  424  KGE---LEDEKGFCAAVDIEDIAKQDYILTPGRYVGIKDEEDDGEPFEEKMERLTGELAK  480
              +    ED  GFC  V++E++ +++YILTPGRYVG+ D E+D EPFE+KM R+T+EL+ 
Sbjct  422  GTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSE  481

Query  481  CFDESNRLQQQIRKNLEAIGYG  502
             F  S+ L++QIRK+LE++GYG
Sbjct  482  QFAKSKELEDQIRKSLEGLGYG  503

66) F7308_0300 in NC_015696


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  507 bits (1912),  Expect = 7e-145, Method: Compositional matrix adjust.
 Identities = 292/497 (59%), Positives = 389/497 (79%), Gaps = 14/497 (2%)

Query  11   SIEVTLWKAADKLRKNIDAAEYKHVVLGLVFLKYISDSFEERYAELQSEEWADPEDKDEY  70
            ++E  LW+AADKLR ++DAAEYK+V LGL+FLKY+SDSFEE+Y EL+ +  AD ED+DEY
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDEY  64

Query  71   LESNIFFVPTKARWSYLLANAKLPEIGKLVDEAMDEIERENNSLKGVLPKVYARDNLNST  130
            L  NIF VP  ARW Y+  NAK PEIG+L+D AM  IE+EN+SLKGVLPK YAR  L+  
Sbjct  65   LAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKE  124

Query  131  TLGELIDIIGNISIGDTQSRSADVLGHVFEYFLGEFALAEGKQGGQFYTPKSVVELLVKM  190
             LG++ID++  + +GDT+SR  DVLG+V+EYF++ FA AEGK++G+FYTP S+V LLV M
Sbjct  125  KLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEM  183

Query  191  LEPYKGRVFDPCCGSGGMFVQSEKFVESHQGQINDISIYGQESNQTTWRLCKMNLAIRGI  250
            +EPYKGR++DPCCGSGGMFVQSE+FVE HQG+++DI+IYGQESN TTW+L KMNLAIRGI
Sbjct  184  IEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGI  243

Query  251  DSSQVKWNSEGSFLNDAHKDLKADYIIANPPFNISDWSGELLRNDARWQYGTPPAGNANY  310
            D+    +N++ +F ND HK+LKADYI+ANPPFN SDW+ E L +D RWQ+G PP GNANY
Sbjct  244  DNDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANY  302

Query  311  AWIQHFLYHLAPTGVAGFVLAKGALTSNTSGEGDIRKALVEANLVDCIVNLPAKLFLNTQ  370
            AWI+H +  LAP G AGFVLA+G+++++  +E +IRK L+E +LV+CIV LP++LF +TQ
Sbjct  303  AWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQ  362

Query  371  IPASLWFI--------KRGRKIKDILFIDARNKGHLINRRTKEFSDDDITEIAQTYHNWK  422
            IP  LWFI        K+ RK ++ILFIDAR+ GH+++R  KEFSD+DI  +AQTYH+W+
Sbjct  363  IPVCLWFISNNKGQNGKKERK-NEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWR  421

Query  423  V--DKNYEDIKGFCKSASYEEVAELNYVLTPGRYVGLEEVEDDFN-FTERFTSLKTQLAE  479
               DK YEDI GFCK  + EEV + +Y+LTPGRYVGL +VE+D + F ++   + ++L+E
Sbjct  422  GTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSE  481

Query  480  QMAQEEVLNQRIMDNLA  496
            Q A+   L+++I  +L 
Sbjct  482  QFAKSKELEDQIRKSLE  498

67) BHWA1_00436 in NC_012225


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  505 bits (1904),  Expect = 3e-144, Method: Compositional matrix adjust.
 Identities = 283/495 (58%), Positives = 391/495 (79%), Gaps = 9/495 (1%)

Query  14   LWAASDKLRGNIDASEYKHVILGLVFLKYISDKFEIRYNELVKEGFDMQDDAEAYREKNI  73
            LW A+DKLRG++DA+EYK+V LGL+FLKY+SD FE +Y+EL ++ +  ++D + Y   NI
Sbjct  10   LWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDEYLAENI  69

Query  74   FYLPEESRFDYISSHARSDEIGAIIDEAMLKIEENNKKLKGILPKNYSRPELDKRRLGEI  133
            F +P E+R +YI+ +A+  EIG +ID AM+ IE +N  LKG+LPK+Y+RP LDK +LG+I
Sbjct  70   FWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEKLGDI  129

Query  134  IDLFS-nikianknkkdiLGNVYEYFLSQFATAEGKRGGEFYTPSPIVKLLVEILEPYKG  192
            IDLF+ ++  ++  K+D+LG VYEYF+++FA+AEGK +GEFYTPS+IVKLLVE++EPYKG
Sbjct  130  IDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKG  189

Query  193  RIYDPCCGSGGMFVQSAKFLEAHSESVNNISVYGQESNPTTWKLCNMNVAIHGIDGNLGK  252
            RIYDPCCGSGGMFVQS +F+E H   +++I++YGQESNPTTWKL +MN+AI+GID +LG 
Sbjct  190  RIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGIDNDLGE  249

Query  253  NNADTFFEDLHKNLKADYILANPPFNMSDWGADALKDDYRWKWGIPPNGNANYGWLSHIA  312
             NADTF +DLHK LKADYILANPPFN SDWG + L DDYRW+ G+PP+GNANY+W+ H+ 
Sbjct  250  RNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWIEHMI  309

Query  313  SKLSESGKAGVVLANGSLSTQTSGEGLIRQNMIKDDLIECIISLPTQLFISTQIPVSLWF  372
            SKL+ +G AG VLANGS+ST   +E  IR+N+I +DL+ECI++LP QLF STQIPV LWF
Sbjct  310  SKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWF  369

Query  373  LNKDKKQKG------HILFIDARNYGRMESRVQRVLDDDDIEAIAKTVHSWQKGKG--YK  424
            ++++K Q+G      +ILFIDAR+ G+M SR  + + D+DI+ +A+T HSW+  ++  Y 
Sbjct  370  ISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGTNDKYYE  429

Query  425  DIKGYCKSASLEEISKEDYILTTGRYVGLEEEDNKEEDFDAKMKVLTEELGECFKESRKL  484
            DI G+CK  +LEE+ +++YILT GRYVGL + ++ EE F+ KMK +T EL+E F  S+ L
Sbjct  430  DIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKEL  489

Query  485  EKIIKDNLEEIGYSI  499
            E  I+ +LE +GY++
Sbjct  490  EDQIRKSLEGLGYGV  504

68) AL1_19050 in NC_021030


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  503 bits (1898),  Expect = 9e-144, Method: Compositional matrix adjust.
 Identities = 291/518 (57%), Positives = 403/518 (78%), Gaps = 26/518 (5%)

Query  7    ADIGFEKEIWKAADKMRGNIDASEYKSVVLGLIFLKYISDKFEAKYQQLVAEGEGFEEDK  66
            A IGFE  +W+AADK+RG++DA+EYK+V LGLIFLKY+SD FE KY++L  +  + EED+
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  67   DEYLSNKNEKGSYDPVFYVPAEARWEAIAIHAHSPEIGTIIDNAMRAIEKENKRLKDILP  126
            DEYL+        + +F VP EARW+ I  +A  PEIG +ID+AM AIEKEN  LK++LP
Sbjct  62   DEYLA--------ENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLP  113

Query  127  KNFARPELDKRRLGEVVDLFTNIRMHEHGDSKDILGRAYEYCLSKFAEAEGKLAGEFYTP  186
            K++ARP LDK +LG+++DLFT    + ++  +D+LGR YEY ++KFA AEGK AGEFYTP
Sbjct  114  KEYARPALDKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTP  173

Query  187  ACIVKTLVNVLQPYKGRVYDPCCGSGGMFVQSAQFIENHSGNINNISVYGQDSNPTTWKM  246
            + IVK LV++++PYKGR+YDPCCGSGGMFVQS +F+E+H G +++I++YGQ+SNPTTWK+
Sbjct  174  SSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKL  233

Query  247  AQMNLAIRGIEADLGQYNADTFFNDCHPTLKADFVMANPPFNLSDWGADKLADDVRWKYG  306
            A+MNLAIRGI+ DLG+ NADTF ND H  LKAD+++ANPPFN SDWG ++L DD RW++G
Sbjct  234  AKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFG  293

Query  307  TPPNGNANFAWIQHIIHHLAPTGRAGVVLANgslssqsggegeIRRKLVEADLVDCVIAM  366
             PP+GNAN+AWI+H+I  LAP G AG VLANGS+S+ + +E EIR++L+E DLV+C++++
Sbjct  294  VPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTL  353

Query  367  PPQLFYTTQIPVSIWFFNKNKQQKGKT------LFIDARNLGTMVTRKLRELTDSDTVDP  420
            P QLFY+TQIPV +WF+++NK Q+GK       LFIDAR++G MV+R L+E++D      
Sbjct  354  PGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDE-----  408

Query  421  IKRGDIQRIADTYNAYVAGK---LENEKGFCVVTSVAEIAKQDFILTPGRYVGIAAQEED  477
                DIQ++A+TY++  + +    E+  GFC V ++ E+ ++++ILTPGRYVG+A  EED
Sbjct  409  ----DIQKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEED  464

Query  478  TEPFEEKMTRLTGELSGLFEKSHELEAEIKKQLGSIGY  515
             EPFE+KM R+T+ELS  F KS ELE +I+K L ++GY
Sbjct  465  EEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGY  502

69) Alfi_1804 in NC_018011


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  502 bits (1895),  Expect = 2e-143, Method: Compositional matrix adjust.
 Identities = 291/518 (57%), Positives = 402/518 (78%), Gaps = 26/518 (5%)

Query  7    ADIGFEKEIWKAADKMRGNIDASEYKSVVLGLIFLKYISDKFEAKYQQLVAEGEGFEEDK  66
            A IGFE  +W+AADK+RG++DA+EYK+V LGLIFLKY+SD FE KY++L  +  + EED+
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  67   DEYLSNKNEKGSYDPVFYVPAEARWEAIAIHAHSPEIGTIIDNAMRAIEKENKRLKDILP  126
            DEYL+        + +F VP EARW+ I  +A  PEIG +ID+AM AIEKEN  LK++LP
Sbjct  62   DEYLA--------ENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLP  113

Query  127  KNFARPELDKRRLGEVVDLFTNIRMHEHGDSKDILGRAYEYCLSKFAEAEGKLAGEFYTP  186
            K++ARP LDK +LG+++DLFT    + ++  +D+LGR YEY ++KFA AEGK AGEFYTP
Sbjct  114  KEYARPALDKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTP  173

Query  187  ACIVKTLVNVLQPYKGRVYDPCCGSGGMFVQSAQFIENHSGNINNISVYGQDSNPTTWKM  246
            + IVK LV++++PYKGR+YDPCCGSGGMFVQS +F+E+H G +++I++YGQ+SNPTTWK+
Sbjct  174  SSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKL  233

Query  247  AQMNLAIRGIEADLGRYNADTFFNDCHPTLKADFVMANPPFNLSDWGADKLADDVRWKYG  306
            A+MNLAIRGI+ DLG  NADTF ND H  LKAD+++ANPPFN SDWG ++L DD RW++G
Sbjct  234  AKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFG  293

Query  307  TPPNGNANFAWIQHIIHHLAPTGRAGVVLANgslssqsggegeIRRKLVEADLVDCVIAM  366
             PP+GNAN+AWI+H+I  LAP G AG VLANGS+S+ + +E EIR++L+E DLV+C++++
Sbjct  294  VPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTL  353

Query  367  PPQLFYTTQIPVSIWFFNKNKQQKGKT------LFIDARNLGTMVTRKLRELTDSDTVDP  420
            P QLFY+TQIPV +WF+++NK Q+GK       LFIDAR++G MV+R L+E++D      
Sbjct  354  PGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDE-----  408

Query  421  IKRGDIQRIADTYNAYVAGK---LENEKGFCAVTSVAEIAKQDFILTPGRYVGIAAQEED  477
                DIQ++A+TY++  + +    E+  GFC V ++ E+ ++++ILTPGRYVG+A  EED
Sbjct  409  ----DIQKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEED  464

Query  478  TEPFEEKMTRLTGELSGLFEKSHELEAEIKKQLGSIGY  515
             EPFE+KM R+T+ELS  F KS ELE +I+K L ++GY
Sbjct  465  EEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGY  502

70) Glaag_3862 in NC_015497


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  501 bits (1891),  Expect = 3e-143, Method: Compositional matrix adjust.
 Identities = 288/526 (55%), Positives = 399/526 (76%), Gaps = 24/526 (4%)

Query  9    PTTSFEQNLWDTANKLRGSVESSEYKHVVLSLIFLKFISDKFEAQRKSLVEQGMSDYVEQ  68
            +T +FE++LW++A+KLRGS++++EYK+V L+LIFLK++SD FE + K L ++  +D  +Q
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  69   IEFYAKDNVFFLPEQARWSYIQQQMKQDDIAVKIDTALHTVEKNNPSLKGALPDNYFSRL  128
             E+ A +N+F +P +ARW YI+++ K+ +I+  ID A+ ++EK+N SLKG LP +Y +R 
Sbjct  62   DEYLA-ENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-ARP  119

Query  129  GLVSSKLASLIDTINNIDTYTSKSSANECGSDDIKSEEDLVGRVYEYFLGKFAASEGKGG  188
            +L   KL+ +ID       +T K +  E         +D++GRVYEYF++KFA++EGK +
Sbjct  120  ALDKEKLGDIIDL------FTFKLGDTES------RKQDVLGRVYEYFIAKFASAEGKNA  167

Query  189  GEFYTPKSIVSLIAEMIEPYKGKIYDPCCGSGGMFVQSLKFIDSHKGNKKDISIYGQEYT  248
            GEFYTP SIV L+ EMIEPYKG+IYDPCCGSGGMFVQS +F++ H+G   DI+IYGQE  
Sbjct  168  GEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESN  227

Query  249  NTTYKLAKMNLAVRGISANLGEVAGDTFFKDQHPDLKADFIMANPPFNQKQWRGENELVD  308
             TT KLAKMNLA+RGI  +LGE  +DTF +D H +LKAD+I+ANPPFN  +W G++ L+D
Sbjct  228  PTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLD  286

Query  309  DPRWSGFDVPPTGNANYAWIMHMISKLSEHGTAGFVLANGSMSSNTSGEGEIRKKIIEKD  368
            D RW  F+VPP GNANYAWI HMISKL+ +GTAGFVLANGSMS++  +E EIRK++IE+D
Sbjct  287  DYRWQ-FGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQD  345

Query  369  LVDCMIALPGQLFYTTQIPVCLWFISKNKKAVDASEDFAKRRNRQGETLFIDAREMGSMV  428
            LV+C+++LPGQLFY+TQIPVCLWFIS+NK           +++R+ E LFIDARE+G MV
Sbjct  346  LVECIVTLPGQLFYSTQIPVCLWFISNNKGQ-------NGKKERKNEILFIDAREIGHMV  398

Query  429  SRVNKELTTDDIAHIAQTYHAWRGEDKDGAYEDIAGFCKSATLDDIKANDYVLTPGRYVG  488
            SR  KE++ +DI  +AQTYH+WRG + D  YEDIAGFCK   L+++K N+Y+LTPGRYVG
Sbjct  399  SRTLKEFSDEDIQKVAQTYHSWRGTN-DKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVG  457

Query  489  AADIADDGIPFEEKMAELSQTLFKQMAEGQELDKNITQNLEVMGYG  534
             AD+ +D  PFE+KM  ++  L  Q A ++EL+ +I ++LE +GYG
Sbjct  458  LADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYG  503

71) Neut_0541 in NC_008344


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  500 bits (1887),  Expect = 8e-143, Method: Compositional matrix adjust.
 Identities = 303/529 (58%), Positives = 407/529 (77%), Gaps = 29/529 (5%)

Query  13   LGFEAELFKAADKLRGNMEPSDYKHVALGLIFLKYISDAFearhaelaaesaaaaeDKDE  72
            +GFE  L +AADKLRG+M++++YK+VALGLIFLKY+SD+FE +  EL  ++ A  ED+DE
Sbjct  4    IGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDE  63

Query  73   YLADNIFWVPKEGRWSHLKANAKRPEIGTLIDDAMRAIEKDNESLKGVLPKDYARPALNK  132
            YLA+NIFWVPKE+RW  ++ NAK+PEIG LID AM AIEK+NESLKGVLPK+YARPAL+K
Sbjct  64   YLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALDK  123

Query  133  VMLGELIDLISGIAMNEGGDKSKDVLGRVYEYFLSQFAGAEGKRGGEFYTPRSVVQVLVQ  192
              LG++IDL++ + + +   + +DVLGRVYEYF+++FA+AEGK +GEFYTP S+V++LV+
Sbjct  124  EKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVE  182

Query  193  MLEPYAGRVYDPCCGSGGMFVQSEKFVLEHGGRIGDIAIYGQESNYTTWRLAKMNLAVRG  252
            M+EPY GR+YDPCCGSGGMFVQSE+FV  H GR++DIAIYGQESN TTW+LAKMNLA+RG
Sbjct  183  MIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRG  242

Query  253  IDSDIRWNNEGSFHKDELRDLRFDHILANPPFNISDWGGDRLREDPRWQFGVPPVGNANY  312
            ID+D+   N ++FH+D  ++L+ D ILANPPFN SDWG +RL +D RWQFGVPP GNANY
Sbjct  243  IDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANY  302

Query  313  AWLQHIHWHLAPFGTAGVVLANGSMSSNQSGEGEIRKAMVEADAVDCMVTLPGQLFYSTQ  372
            AW++H+   LAP GTAG VLANGSMS++  +E EIRK ++E D V+C+VTLPGQLFYSTQ
Sbjct  303  AWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQ  362

Query  373  IPACLWFLARDKSNGKRGSLSKGGETLRDRRGEVLFIDARNMGTLVDRTRRELTDEDIQK  432
            IP CLWF++ +K++  +          ++R+ E+LFIDAR++G +V RT +E++DEDIQK
Sbjct  363  IPVCLWFISNNKGQNGK----------KERKNEILFIDAREIGHMVSRTLKEFSDEDIQK  412

Query  433  IADTYHAWRGEKVAGDAQGSASVAGGRMPGATQYADIPGFCKAATLEEIRKHGHVLTPGR  492
            +A+TYH+WRG                       Y DI+GFCK   LEE++++  +LTPGR
Sbjct  413  VAQTYHSWRG------------------TNDKYYEDIAGFCKVVNLEEVKNNEYILTPGR  454

Query  493  YVgaeaaeddgeafadKMQRLSaqwreqqqeaarLDVEIEANLRELGYG  541
            YVG    E+D E+F +KM+R++++  EQ   +  L+ +I  +L  LGYG
Sbjct  455  YVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYG  503

72) Tmath_1864 in NC_014209


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  497 bits (1876),  Expect = 5e-142, Method: Compositional matrix adjust.
 Identities = 292/520 (57%), Positives = 392/520 (76%), Gaps = 31/520 (5%)

Query  7    GVLNFASTLWAAADRLRNNMEPSEYKHIVLGLIFLKYISDAFKFRKEELEYLIKDPKSEE  66
            + + F   LW AAD+LR +M+++EYK++ LGLIFLKY+SD+F     E  Y  K+ K + 
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSF-----EEKY--KELKQDP  54

Query  67   YYCETNEEAQLILEDKDEYMAANVFYVPPEARYEYIMANARRSDIGKLIDNAMDLIEKEN  126
            Y   ++EE Q      DEY+A N+F VP EAR +YI  NA++++IG+LID+AM  IEKEN
Sbjct  55   Y---ADEEDQ------DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKEN  105

Query  127  PKQLRGVLPKVYTRAPLDPHTLGEIVTLIGSINFGKNEE--LDVLGRVYEYFLSEFARKE  184
               L+GVLPK Y+R++LD + LG+I+ L+ ++++G  E    DVLGRVYEYF++ FA  E
Sbjct  106  ES-LKGVLPKEYARPALDKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAE  163

Query  185  GKRGGEFFTPSTVVKLLVEMIQPLHGRVFDPCCGSGGMFVQSIRFVEAHAGKKGDISIYG  244
            GK +GEF+TPS++VKLLVEMI+P  GR++DPCCGSGGMFVQS RFVE H G+ +DI+IYG
Sbjct  164  GKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYG  223

Query  245  QESNPTTYRLCKMNLAIRGIEADI--RLGNSFTDDQFKDLRADYILANPPFNDSAWGADR  302
            QESNPTT +L KMNLAIRGI+ D+  R +++F +D  K+L+ADYILANPPFN S WG +R
Sbjct  224  QESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  303  LANDVRWKYGLPPDSNANYAWIQHFIYHLAPKGVAGFVLANGSMTTSNNAEYEIRKRIIE  362
            L +D RW++G+PP +NANYAWI+H I  LAP+G AGFVLANGSM+TS + E EIRK +IE
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  363  DNLVDCMVALPPQLFYTTGIPACLWFI--RKGRETK-----ETLFIDARKIGVMVDRTHR  415
            ++LV+C+V+LP QLFY+T IP CLWFI   KG++ K     E LFIDAR IG MV RT +
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLK  403

Query  416  ELTDEEIQKIAQTYHNWRNKNG--YEDVKGFCASVPMEVIAQNDYVLAPGRYVGVEDTRE  473
            E++DE+IQK+AQTYH+WR  N+  YED+ GFC  V +E + +N+Y+L+PGRYVG+ D  E
Sbjct  404  EFSDEDIQKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEE  463

Query  474  DDIPFEEKMAELTEKLYQQMKEAKRLDEVIKANLEELGYG  513
            D+ PFE+KM  +T  L +Q   +K L++ I+ +LE LGYG
Sbjct  464  DEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYG  503

73) R2APBS1_3877 in NC_020541


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  497 bits (1875),  Expect = 6e-142, Method: Compositional matrix adjust.
 Identities = 279/536 (53%), Positives = 396/536 (74%), Gaps = 35/536 (6%)

Query  2    NIELRKTLWAAADKLRSSMDAAEYKHLVLGLIFVKYISDAFDELRSGLRVALADPESELY  61
             I +   LW AADKLR+SMDAAEYK++ LGLIF+KY+SD+F+E    L+           
Sbjct  3    TIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELK-----------  51

Query  62   LEDPVMRAAAEEDRDYYTAANVFWVPEQARWENLRAHAKQANIGRRIDAALDAIEADNPR  121
             +DP    A EED+D Y A N+FWVP +ARW+ +  +AK+++IG+ ID A+ AIE +N  
Sbjct  52   -QDPY---ADEEDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENES  107

Query  122  LKGILDKRFGRAQLEPGKLGELVDLVSTIGFGAGGKAKDVLGEVYEYFLGQFASAEGKKG  181
            LKG+L K ++R+ L+  KLG+++DL +    ++ ++ +DVLG VYEYF+++FASAEGK++
Sbjct  108  LKGVLPKEYARPALDKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNA  167

Query  182  GQFYTPASVVEVLVEILGPHQGKVYDPCCGSGGMFVQSEKFVESHGGRFGDLSIYGQEAN  241
            G+FYTP+S+V +LVE++ P +G++YDPCCGSGGMFVQSE+FVE H GR++D++IYGQE+N
Sbjct  168  GEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESN  227

Query  242  PTTWRLVAMNLAIRGMDFNLGKEPADTFHRDQHPDLRADYVLANPPFNISDWGGERLADD  301
            PTTW+L  MNLAIRG+D +LG   ADTFH D H +L+ADY+LANPPFN SDWG ERL DD
Sbjct  228  PTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDD  287

Query  302  RRWQFGTPPAGNANYAWLQHILHHLSARGQAGVVLANGSMSSNQNSEGAIRQAMVERDVV  361
             RWQFG PP GNANYAW++H++  L++ G AG VLANGSMS++ + E  IR+ ++E+D+V
Sbjct  288  YRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLV  347

Query  362  EVMVALPPQLFFNTQIPACLWFLAKDKTKNGR-DRRGEVLFIDARKLGRMEGRVFRVFDD  420
            E +V+LP QLF++TQIP CLWF++++K +NG+ +R+ E+LFIDAR +G+M +R ++ F D
Sbjct  348  ECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSD  407

Query  421  EDIARIGDTVHRWRQAFPPLPPATegssrgregrgegLAYADVPGFCRSVPLAEIAEHGY  480
            EDI ++++T H WR +                       Y D++GFC+ V L E+ ++ Y
Sbjct  408  EDIQKVAQTYHSWRGTNDKY-------------------YEDIAGFCKVVNLEEVKNNEY  448

Query  481  VLTPGRYVGAEDIEDDDEVFSEKMERLTAQLAEQMAKGVELDALIREKLGALGYGV  536
            +LTPGRYVG  D+E+D+E F +KM R+T++L+EQ AK+ EL+  IR  L +LGYGV
Sbjct  449  ILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

74) hsdM in NC_008384


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  497 bits (1874),  Expect = 8e-142, Method: Compositional matrix adjust.
 Identities = 293/508 (58%), Positives = 390/508 (77%), Gaps = 10/508 (1%)

Query  7    GDLGFTAELFKAADKLRGNLEPSEYKHVALGLIFLKYISDAFEGLHARLTadeyadaedp  66
            + +GF   L +AADKLRG+++++EYK+VALGLIFLKY+SD+FE     L  D YAD ED 
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  67   eeylaeNVFWVPTEARWPFLQANAKRPEIGKLIDEAMEAIERFPSNEGLKGVLPKNYARP  126
            +EYLAEN+FWVP EARW +++ NAK+PEIG+LID AM AIE+   NE+LKGVLPK+YARP
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEK--ENESLKGVLPKEYARP  119

Query  127  TLNKTMLGELIDLFSNIGLHDSKDTAKDLLGRVYEYFLSGFAGSEGKRGGEFFTPRSVVR  186
            +L+K  LG++IDLF+ + L D+    +D+LGRVYEYF++ FA++EGK +GEF+TP S+V+
Sbjct  120  ALDKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVK  178

Query  187  TLVEMLEPYKGRVYDPCCGSGGMFVQSENFIEEHGGRRNDIAVYGQEINHTTWRLAKMNL  246
             LVEM+EPYKGR+YDPCCGSGGMFVQSE F+E H GR +DIA+YGQE N TTW+LAKMNL
Sbjct  179  LLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNL  238

Query  247  AVQGIDADIRWNNEGSFHRDELPDLKADFILANPPFNISDWGGERLAEDTRWKFGKPPNG  306
            A++GID D+   N ++FH D   +LKAD+ILANPPFN SDWG ERL +D RW+FG PP+G
Sbjct  239  AIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKG  298

Query  307  NANFGWLQHIIHHLAPRGTAGVVLANgsmssqqsgegeIRKAMIERDQVDCMVALPGQLF  366
            NAN++W++H+I  LAP GTAG VLANGSMS+   +E EIRK +IE+D V+C+V+LPGQLF
Sbjct  299  NANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLF  358

Query  367  YSTQIPACLWILARDKSANGHRDRRGEILFIDARKLGFMVDRVRREFTADDIEKITGAYH  426
            YSTQIP CLW+++ +K+ NG ++R+ EILFIDAR +G MV R  +EF+ +DI+K++ +YH
Sbjct  359  YSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYH  418

Query  427  RWRSKPETRVNNGWADYADEPGFCKSASLEEVRGHGHVLTPGRYVGAADAEDDGVSFAEK  486
             WR+  +         Y D +GFCK  +LEEV+ +  +LTPGRYVG AD E+D  +F +K
Sbjct  419  SWRGTNDKY-------YEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQK  471

Query  487  FEGLRETLMAQFEEGRRLEKAIEAALAA  514
               +   L  QF  ++ LE  I  +L +
Sbjct  472  MKRITSELSEQFAKSKELEDQIRKSLEG  499

75) Mmol_0229 in NC_012968


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  496 bits (1872),  Expect = 1e-141, Method: Compositional matrix adjust.
 Identities = 281/500 (57%), Positives = 392/500 (79%), Gaps = 9/500 (1%)

Query  12   LEKQLWKAADKLRKNIDAAEYKHIVLGLIFLKYISDTFEQQFAKLAAGVGEYAGSDPEDK  71
            +E +LW+AADKLR ++DAAEYK++ LGLIFLKY+SD+FE+++  L  +   YA  D ED+
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQD--PYA--DEEDQ  61

Query  72   DEYLAENVFFVPQEARWSYLQSQAKQPDIGKMVDNAMDAIEAENASLKGVLPKVFARDNL  131
            DEYLAEN+F VP+EARW Y++ +AK+P+IG+++D+AM AIE EN SLKGVLPK +AR  L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  132  DPASLGQLIDLVGNIALGDAKSRSADVLGHVFEYFLGEFALAEGKQGGQFYTPRSVVELL  191
            D   LG++IDL   + LGD+ SR  DVLG+V+EYF++ FA AEGK++G+FYTP S+V LL
Sbjct  122  DKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  192  VEMLEPYNGRVFDPCCGSGGMFVQSEKFIADHQGKVNDISIYGQESNQTTWRLAKMNLAI  251
            VEM+EPY+GR++DPCCGSGGMFVQSE+F+  HQG+++DI+IYGQESN TTW+LAKMNLAI
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240

Query  252  RGIEASQVKWNNEGSFLNDSHKDLKADYIIANPPFNVSDWSGELLRNDGRWQFGVPPAGN  311
            RGI+     +N + +F ND HK+LKADYI+ANPPFN SDW+ E L +D RWQFGVPP GN
Sbjct  241  RGIDNDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGN  299

Query  312  ANFAWLQHFIYHLNPTGQAGIVLAKGALTSKTSGEGDIRKALIEQGNVIDCIVNLPAKLF  371
            AN+AW++H I  L P G AG+VLA+G++++   +E +IRK LIEQ ++++CIV LP++LF
Sbjct  300  ANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQ-DLVECIVTLPGQLF  358

Query  372  LNTQIPAALWFMSRNRTNGKFRNRSNEILFIDARNLGHLINRRTKELSHTDIKQITDTYH  431
             +TQIP  LWF+S N+ +   ++R NEILFIDAR++GH+++R  KE+S+ DI+++++TYH
Sbjct  359  YSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYH  418

Query  432  NWRNPNGS-YADVSGFCASVSLERVKELDYVLTPGRYVGLPD-DEDDFNFAERFNALKAE  489
            +WR  N+  Y D++GFC  V+LE VK+ +Y+LTPGRYVGL+D +ED+  F ++ + + +E
Sbjct  419  SWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSE  478

Query  490  YEAQLLEEEKLNKAIAENLA  509
               Q+     L+  I  +L 
Sbjct  479  LSEQFAKSKELEDQIRKSLE  498

76) Mbur_1222 in NC_007955


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  495 bits (1868),  Expect = 2e-141, Method: Compositional matrix adjust.
 Identities = 283/499 (57%), Positives = 395/499 (80%), Gaps = 8/499 (1%)

Query  12   TIEKQLWKAADKLRKNIDAAEYKHIVLGLIFLKYISDSFEELYQKLQKGDGDYTGADPED  71
             +E +LW+AADKLR ++DAAEYK++ LGLIFLKY+SDSFEE Y+ L+  ++ Y  AD ED
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELK--QDPY--ADEED  60

Query  72   RDEYKAENVFFVPAIARWSYLQSKAKQPEIGKDVDRAMDAIERENPLLKGVLPKVFARGN  131
            +DEY AEN+F VP  ARW Y++ +AK+PEIG+ +D+AM AIE+EN  LKGVLPK +AR  
Sbjct  61   QDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPA  120

Query  132  LDPTSLGGLIDLVSNIALGDAKARSADILGHVFEYFLGEFALAEGKRGGQFYTPRSVVEL  191
            LD   LG++IDL + + LGD+ +R  D+LG+V+EYF++ FA AEGK +G+FYTP S+V L
Sbjct  121  LDKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKL  179

Query  192  LVEMLEPYNGRVFDPCCGSGGMFVQSEKFVADHRGKVNDISIYGQESNQTTWRLAKMNLA  251
            LVEM+EPY+GR++DPCCGSGGMFVQSE+FV  H+G+++DI+IYGQESN TTW+LAKMNLA
Sbjct  180  LVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLA  239

Query  252  IRGIDSSQVKWNNEGSFLNDSHKDLKADYVIANPPFNDSDWSGDLLRKDGRWKYGVPPAG  311
            IRGID+    +N + +F ND HK+LKADY++ANPPFN SDW+ + L  D RW++GVPP G
Sbjct  240  IRGIDNDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKG  298

Query  312  NANYAWIQHFLYHLSPNGQAGFVLAKGSLTSKSSGEGDIRKELVESRMVDCIVNLPPKLF  371
            NANYAWI+H +  L+PNG AGFVLA+GS+++ + +E +IRK+L+E  +V+CIV LP +LF
Sbjct  299  NANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLF  358

Query  372  LNTQIPASLWFLSRNKANGKYRNRTDEILFIDARNMGHLINRRTREFSPEDIQKVADTYH  431
             +TQIP  LWF+S NK++   ++R +EILFIDAR++GH+++R  +EFS EDIQKVA+TYH
Sbjct  359  YSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYH  418

Query  432  NWRNPDGN-YEDVKGFCNSTSIERVHELDYVVTPGRYVGLP-VEEDDFDFNERFTGLKAE  489
            +WR  +++ YED+ GFC+  ++E V + +Y++TPGRYVGL+ VEED+  F+++   + +E
Sbjct  419  SWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSE  478

Query  490  FEGQLKEEEQLNSQILENL  508
            +  Q+    +L+ QI  +L
Sbjct  479  LSEQFAKSKELEDQIRKSL  497

77) Calow_2047 in NC_014657


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  495 bits (1868),  Expect = 2e-141, Method: Compositional matrix adjust.
 Identities = 288/520 (56%), Positives = 394/520 (76%), Gaps = 31/520 (5%)

Query  7    GVLNFASTLWAAADRLRNNMEPSEYKHIVLGLIFLKYISDAFKFRQEELEYLIKDPKNEE  66
            + + F   LW AAD+LR +M+++EYK++ LGLIFLKY+SD+F     E  Y  K+ K++ 
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSF-----EEKY--KELKQDP  54

Query  67   YYCGSEEEAQLILEDKDEYMAANVFYVPPEARYEYIMANARRSDIGKLIDDAMDLIEKEN  126
            Y   ++EE Q      DEY+A N+F VP EAR +YI  NA++++IG+LID AM  IEKEN
Sbjct  55   Y---ADEEDQ------DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKEN  105

Query  127  PKQLRGVLPKVYTKAPLDPHTLGEIVNLIGSINFGKNEE--LDVLGRVYEYFLSEFARKE  184
               L+GVLPK Y++++LD + LG+I++L+ ++++G  E    DVLGRVYEYF++ FA  E
Sbjct  106  ES-LKGVLPKEYARPALDKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAE  163

Query  185  GKRGGEFFTPSSVVKLLVEMIQPLHGRVFDPCCGSGGMFVQSIRFVEAHAGKKGDISIYG  244
            GK +GEF+TPSS+VKLLVEMI+P  GR++DPCCGSGGMFVQS RFVE H G+ +DI+IYG
Sbjct  164  GKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYG  223

Query  245  QESNPTTYRLCKMNLAIRGIEADI--RLGNSFTDDQFKDLRADYILANPPFNDSAWGADR  302
            QESNPTT +L KMNLAIRGI+ D+  R +++F +D  K+L+ADYILANPPFN S WG +R
Sbjct  224  QESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  303  LANDVRWKYGLPPDSNANYAWIQHFIYHLAPKGVAGFVLANGSMTTSNNAEYEIRKRIIE  362
            L +D RW++G+PP +NANYAWI+H I  LAP+G AGFVLANGSM+TS + E EIRK +IE
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  363  DNLVDCMVALPPQLFYTTGIPACLWFI--RKGRETK-----ETLFIDARKMGVMVDRTHR  415
            ++LV+C+V+LP QLFY+T IP CLWFI   KG++ K     E LFIDAR +G MV RT +
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLK  403

Query  416  ELTDEEIQKIAETYHNWRNKSG--YEDLKGFCASVPMEVIAQNDYVLAPGRYVGVEDTQE  473
            E++DE+IQK+A+TYH+WR  ++  YED+ GFC  V +E + +N+Y+L+PGRYVG+ D +E
Sbjct  404  EFSDEDIQKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEE  463

Query  474  DDIPFEEKMAELTEKLYQQMKEARRLDEIIKANLEELGYG  513
            D+ PFE+KM  +T  L +Q   ++ L++ I+ +LE LGYG
Sbjct  464  DEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYG  503

78) STH1910 in NC_006177


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  495 bits (1868),  Expect = 2e-141, Method: Compositional matrix adjust.
 Identities = 287/516 (56%), Positives = 402/516 (78%), Gaps = 22/516 (4%)

Query  24   TLWAAADKLRSSMDAAEYKHIVLGLIFLKYISDSFVAQRERLRKVLADPASDLYLDDPAD  83
             LW AADKLR+SMDAAEYK++ LGLIFLKY+SDSF    E+ + +  DP    Y D+   
Sbjct  9    KLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSF---EEKYKELKQDP----YADE---  58

Query  84   REAALEEREYYTMDNVFWVPDQARWETIRAHAKQPDIGARIDQALEAIEEENPRLKGLLD  143
                 E+++ Y  +N+FWVP +ARW+ I  +AK+P+IG  ID+A+ AIE EN  LKG+L 
Sbjct  59   -----EDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLP  113

Query  144  KRYGRAHLEPGRLGELVDLISTIGFGE-EHRARDVLGEVYEYFLGQFASAEGKKGGQFYT  202
            K Y+R+ L+  +LG+++DL+ T+ +G+ E R +DVLG VYEYF+++FASAEGK++G+FYT
Sbjct  114  KEYARPALDKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYT  172

Query  203  PASVVKLLVAILAPYKGKVYDPCCGSGGMFVQAERFLESRGGRFGDLSIYGQEANPTTWR  262
            P+S+VKLLV ++ PYKG++YDPCCGSGGMFVQ+ERF+E + GR++D++IYGQE+NPTTW+
Sbjct  173  PSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWK  232

Query  263  LVAMNLTIRGLDFNLGKEPADTFHRNQHPDLRADYILANPPFNMSDWGGERLVDDPRWIY  322
            L  MNL+IRG+D +LG   ADTFH + H +L+ADYILANPPFN SDWG ERL+DD RW +
Sbjct  233  LAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQF  292

Query  323  GTPPAGNANFAWLQHILWHLAPAGQAGVVLANGSMSSQQNNEGEIRKNmveadvvevmva  382
            G PP GNAN+AW++H++  LAP G AG VLANGSMS+  ++E EIRKN++E D+VE +V+
Sbjct  293  GVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVT  352

Query  383  LPPQLFFNTQIPACLWFLCKDKTKNG-RDRRGEVLFIDARKMGRMETRVNRVLDDEEIAK  441
            LP QLF++TQIP CLWF+ ++K +NG ++R+ E+LFIDAR +G+M +R  + + DE+I K
Sbjct  353  LPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQK  412

Query  442  IANTVHLWRQDREAPPGQVYEDVPGFCRAVKLEEIAANGYVLTPGRYVGAEEVEDDDETF  501
            +A+T H WR    +  ++ YED++GFC+ V+LEE+  N Y+LTPGRYVG  +VE+D+E F
Sbjct  413  VAQTYHSWR----GTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPF  468

Query  502  AEKMERLTAELAEQMKKGAELDEQIRQILGRLGYDL  537
             +KM R+T+EL+EQ  K+ EL++QIR+ L  LGY++
Sbjct  469  EQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

79) hsdM-1 in NC_007204


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  495 bits (1866),  Expect = 3e-141, Method: Compositional matrix adjust.
 Identities = 275/513 (54%), Positives = 387/513 (76%), Gaps = 16/513 (3%)

Query  17   FEEALWDAANKLRGSVESSEYKHIVLSLIFLKFISDTFEQQRQKLIDTGYEKHIDMVQAY  76
            FEE LW+AA+KLRGS++++EYK++ L+LIFLK++SD+FE++ + L +  Y  + D  + Y
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ-DEY  64

Query  77   TKDNVFYLPAESRWSFIQQNAKQEDIALKIDTALSTIEKTNQSLKGALPDNYFSRLGLTA  136
              +N+F +P E+RW +I++NAK+ +I+  ID A+ +IEK N+SLKG LP +Y +R +L  
Sbjct  65   LAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-ARPALDK  123

Query  137  SKLAALIDVVN-NIDTIGNPEEDTVGRVYEYFLGKFAATEGKGGGEFYTPKSVVNLIAEM  195
             KL+ +ID+   +++   +  +D +GRVYEYF++KFA++EGK +GEFYTP S+V+L+ EM
Sbjct  124  EKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEM  183

Query  196  VEPYQGKIYDPCCGSGGMFVQSIKFIESHHGNTKDVSIYGQEYTSTTYKLAKMNLAIRGI  255
            +EPY+G+IYDPCCGSGGMFVQS +F+E H+G   D++IYGQE  +TT KLAKMNLAIRGI
Sbjct  184  IEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGI  243

Query  256  SSNLGDVAADTFFKDQHEDLKADFIMANPPFNQKDWRASDELVDDPRWAGYPTPPTGNAN  315
             ++LG+  ADTF +D H +LKAD+I+ANPPFN  DW + + L+DD RW  +  PP GNAN
Sbjct  244  DNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYRWQ-FGVPPKGNAN  301

Query  316  YAWILHMISKLSEHGTAGFVLANGSMSTTTSGEGEIRQQIIENDLVDCMIALPGQLFYTT  375
            YAWI HMISKL+ +GTAGFVLANGSMST+  +E EIR+++IE+DLV+C+++LPGQLFY+T
Sbjct  302  YAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYST  361

Query  376  QIPVCLWFINkdkqaksadskaRGLRNRSGETLFIDARAIGSMISRTNKELTKDDIEAIA  435
            QIPVCLWFI+        +    G ++R  E LFIDAR IG M+SRT KE++ +DI+ +A
Sbjct  362  QIPVCLWFIS-------NNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVA  414

Query  436  KTYHAWRGEKEAGGYEAYTDEAGYCKSATLDDMKANDYVLTPGRYVGAAAIEDDGISFET  495
            +TYH+WRG ++   Y  Y D AG+CK   L+++K N+Y+LTPGRYVG A +E+D  +FE 
Sbjct  415  QTYHSWRGTNDK--Y--YEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQ  470

Query  496  KMLELSQTLYAQMQASEKLDATIRQNLEVLGYG  528
            KM  ++  L  Q   S  L+  IR++LE LGYG
Sbjct  471  KMKRITSELSEQFAKSKELEDQIRKSLEGLGYG  503

80) Jden_2248 in NC_013174


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  495 bits (1865),  Expect = 4e-141, Method: Compositional matrix adjust.
 Identities = 278/513 (55%), Positives = 407/513 (80%), Gaps = 14/513 (2%)

Query  8    KPTKTLEQTLWEAADKLRGNQEPSEYKHVVLGLVFLKYISDRFeerratleaelaaeGIK  67
             +T  +E+ LW+AADKLRG+ +++EYK+V LGL+FLKY+SD FEE+            +K
Sbjct  1    MATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYK---------ELK  51

Query  68   PERLPDFLEDRDEYTSHNVFWVPELARWGYIQSVAKQPEIGQQIDQAMDLIEKENPTLRG  127
             +  +D  ED+DEY ++N+FWVP  ARW YI+  AK+PEIGQ ID+AM  IEKEN +L+G
Sbjct  52   QDPYAD-EEDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKG  110

Query  128  VLPRNYGRDGLDKRRLGELVDLIGSIGFTETDDHGADDVLGRVYEYFLGQFAGKETGKDA  187
            VLP++Y+R +LDK +LG+++DL+ ++ + +T+ +  +DVLGRVYEYF+++FA+ E GK+A
Sbjct  111  VLPKEYARPALDKEKLGDIIDLF-TFKLGDTESR-KQDVLGRVYEYFIAKFASAE-GKNA  167

Query  188  GAFYTPRSVVKTLVEMLEPYQGRVYDPAAGSGGMFVQSAEFVKAHGGKRTDISVYGQEFT  247
            G FYTP S+VK LVEM+EPY+GR+YDP  GSGGMFVQS  FV  H G+  DI++YGQE  
Sbjct  168  GEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESN  227

Query  248  DTTWKLSKMNLALRGIEADMGPRSADSFTDDLHPDLRADFVIANPPFNVSDWWDAKLEGD  307
             TTWKL+KMNLA+RGI+ D+G R+AD+F +DLH +L+AD+++ANPPFN SDW + +L +D
Sbjct  228  PTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDD  287

Query  308  PRWQYGTPPQGNANFAWVQHFIYHLSPKGTAGFVLANgslssksggegeMRRKLVEADLV  367
             RWQ+G PP+GNAN+AW++H I  L+P+GTAGFVLANGS+S+ + +E E+R++L+E DLV
Sbjct  288  YRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLV  347

Query  368  DCIVAMPDKLFFNTGIPVALWFVSKARHGNGHRERRSEVLFIDARKLGTMESRRLRVLTD  427
            +CIV++P++LF++T IPV LWF+S+ +  NG +ER++E+LFIDAR +G M SR L+ ++D
Sbjct  348  ECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSD  407

Query  428  DDIAKIADTYHAWRNHDGG-YEDVPGFAKAASLEEIAKHDYVLTPGRYVGAAEAEVDDEP  486
            +DI K+A+TYH+WR  ++  YED++GF K  +LEE+ +++Y+LTPGRYVG A+ E D+EP
Sbjct  408  EDIQKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEP  467

Query  487  IDEKIERLTKELFAEFERGRELEDEVRQRLSGV  519
            +++K+ R+T EL  +F +++ELED++R+ L G+
Sbjct  468  FEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

81) DaAHT2_1004 in NC_014216


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  495 bits (1865),  Expect = 4e-141, Method: Compositional matrix adjust.
 Identities = 277/514 (54%), Positives = 390/514 (76%), Gaps = 14/514 (2%)

Query  24   PTKSFEQTLWETADRLRGTVESSEYKHVVLSLIFLKFVSDKFEQRKRELIAEGQGDYVDM  83
            +T +FE+ LW++AD+LRG+++++EYK+V L+LIFLK+VSD FE++ +EL  +  +D  D 
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  84   VEFYTMKNVFYLPEEARWSTIRKAAKQDDIAVRIDTALHTVEKNNPALRGALPDNYFSRL  143
             E Y   N+F +P EARW  I   AK+ +I+  ID A+ ++EK+N +L+G LP +Y +R 
Sbjct  62   DE-YLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-ARP  119

Query  144  GLDVSKLAALIDSIN-NIDTVADHEQDVVGRVYEYFLGKFAATEGKGGGEFYTPKCVVKL  202
            +LD  KL+ +ID +  +++    + QDV+GRVYEYF++KFA++EGK +GEFYTP  +VKL
Sbjct  120  ALDKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKL  179

Query  203  IAEMIEPFRGKIYDPCCGSGGMFVQSVKFVESHRGSKKDISIYGQEYTSTTYKLSKMNLA  262
            + EMIEP++G+IYDPCCGSGGMFVQS +FVE H+G   DI+IYGQE  +TT KL+KMNLA
Sbjct  180  LVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLA  239

Query  263  IRGIAANLGEAPADTFFKDQHPDLKADFIMANPPFNLKEWRAANELTDDPRWAGYEVPPT  322
            IRGI  +LGE  ADTF +D H +LKAD+I+ANPPFN  +W + + L DD RW  + VPP 
Sbjct  240  IRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYRWQ-FGVPPK  297

Query  323  GNANYAWILHMVSKLSENGVAGFVLANGSMSTNTSGEGLIRRKLIENDLIDCMIAMPGQL  382
            GNANYAWI HM+SKL+ NG AGFVLANGSMST+  +E  IR++LIE+DL++C++++PGQL
Sbjct  298  GNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQL  357

Query  383  FYTTQIPVCLWFITRNKKAQRIEGHSDSSHRDRRGETLFIDARNMGTMIDRTHKELTCDD  442
            FY+TQIPVCLWFI+ NK        ++++ ++R+ E LFIDAR++G M+ RT KE++ +D
Sbjct  358  FYSTQIPVCLWFISNNK--------GQNGKKERKNEILFIDAREIGHMVSRTLKEFSDED  409

Query  443  IAEIARTYHAWRGEAKDGAYQDQPGFCKAATLAEIKANDYVLTPGRYVGAAEIEDDGIPF  502
            I  +A+TYH+WRG ++D  Y+D +GFCK   L E+K N+Y+LTPGRYVG A++E+D  PF
Sbjct  410  IQKVAQTYHSWRG-TNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPF  468

Query  503  EQKMTELSQTLYRQMAEAEKLDAVIRRNLEALGY  536
            EQKM  ++  L  Q A +  L+  IR++LE+LGY
Sbjct  469  EQKMKRITSELSEQFAKSKELEDQIRKSLEGLGY  502

82) hsdM in NC_010617


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  495 bits (1865),  Expect = 4e-141, Method: Compositional matrix adjust.
 Identities = 274/508 (54%), Positives = 401/508 (79%), Gaps = 14/508 (2%)

Query  14   LEQTLWDAADKLRGNQEPSEYKHVVLGLVFLKYVSDRFEERREQLKGELAAEGIKPERIE  73
            +E+ LW+AADKLRG+ +++EYK+V LGL+FLKYVSD FEE+  +LK +  A+        
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADE-------  58

Query  74   SFLEDRDEYASQNVFWVPSLARWGYVQSVAKQPEIGQQIDQAMDLIEKENPSLRGVLPRN  133
               ED+DEY ++N+FWVP  ARW Y++  AK+PEIGQ ID+AM  IEKEN SL+GVLP++
Sbjct  59   ---EDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKE  115

Query  134  YGRDGLDKRRLGELVDLIGSIGFTETDDHGADDVLGRVYEYFLGQFAGKETGKDAGAFYT  193
            Y+R +LDK +LG+++DL+ ++ + +T+ +  +DVLGRVYEYF+++FA+ E GK+AG FYT
Sbjct  116  YARPALDKEKLGDIIDLF-TFKLGDTESR-KQDVLGRVYEYFIAKFASAE-GKNAGEFYT  172

Query  194  PRSVVRTLVEMLEPYKGRVYDPAAGSGGMFVQSAEFVKAHGGKRTDISVYGQEFTDTTWK  253
            P S+V+ LVEM+EPYKGR+YDP  GSGGMFVQS  FV  H G+  DI++YGQE   TTWK
Sbjct  173  PSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWK  232

Query  254  LAKMNLALRGIEADMGTHSADSFTEDLHPDLRADFVIANPPFNVSDWWDAKLADDPRWKY  313
            LAKMNLA+RGI+ D+G ++AD+F +DLH +L+AD+++ANPPFN SDW + +L DD RW++
Sbjct  233  LAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQF  292

Query  314  GTPPKGNANFAWVQHFLHHLAPYGTAGFVLANgslsskssgegeTRQRLVEAGLVDCIVA  373
            G PPKGNAN+AW++H +  LAP GTAGFVLANGS+S+ + +E E R+ L+E +LV+CIV+
Sbjct  293  GVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVT  352

Query  374  MPDKLFFNTGIPVSLWFVSKGRDGNGHRARKGEVLFIDARKLGRMESRKLRVLDNDDIGK  433
            +P++LF++T IPV LWF+S+ ++ NG + RK E+LFIDAR +G+M SR L+ + ++DI K
Sbjct  353  LPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQK  412

Query  434  IAGTYHAWRDHDGG-YQNETGFAKAAKIEEIEKHDFVLTPGRYVGAAEAEVDDEPIDEKI  492
            +A TYH+WR+ ++  Y++ +GF K  ++EE+ +++++LTPGRYVG A+ E D+EP+++K+
Sbjct  413  VAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKM  472

Query  493  ERLTTELFAEFERGRELEDEVRARLRGV  520
             R+T+EL  +F +++ELED++R  L G+
Sbjct  473  KRITSELSEQFAKSKELEDQIRKSLEGL  500

83) BIL_01960 in NC_021008


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  494 bits (1864),  Expect = 4e-141, Method: Compositional matrix adjust.
 Identities = 296/504 (59%), Positives = 397/504 (79%), Gaps = 11/504 (2%)

Query  9    AEIGFEEQIWSAADKLRGNIDASEYKNVVLGLIFLKYISDKFDQKYQelveegegfeedr  68
            A IGFEE++W AADKLRG++DA+EYKNV LGLIFLKY+SD F++KY+EL ++  + EED+
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  69   deYASENIFFVPESARWKTIAAAAHTPEIGKAIDEAMRQIEAENNKLKGILPKNFARQEL  128
            DEY +ENIF VP  ARW+ I   A  PEIG+ ID AM  IE EN+ LKG+LPK++AR  L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  129  DKRRLGEVVDLFANVKMAEKGDSR-DILGRTYEYCLAKFAEAEGKNAGEFYTPACVVKTL  187
            DK +LG+++DLF+  K+++    + D+LGR YEY +AKFA AEGKNAGEFYTP+ +VK L
Sbjct  122  DKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  188  VEVIEPYHGRVYDPCCGSGGMFVQSADFVKRHQGNINDISVYGQESNPTTWKMATMNLAI  247
            VE+IEPY GR+YDPCCGSGGMFVQS  FV +HQG ++DI++YGQESNPTTWK+A MNLAI
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240

Query  248  RGIDADLGDHNADTFFEDLHKTEKFDFILANPPFNLKDWGGKKLENDVRWQYGTPPEGNA  307
            RGID DLG++NADTF +DLHK  K D+ILANPPFN  DWG  +L +D RWQ+G PP GNA
Sbjct  241  RGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNA  300

Query  308  NFAWVQHMIHHLNRSGRMGMVLANGALSSQTNNEGEIRAKIVDADLVEGIIAMPDKLFYS  367
            N+AW++HMI  L  +G  G VLANG++S+  ++E EIR ++++ DLVE I+++P++LFYS
Sbjct  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360

Query  368  TGIPVSLWIITKNKKQSGK------TLFIDARDMGTMVSRRLREFTDEDIAKVSTAFDAF  421
            T IPV LW+I++NK Q+GK       LFIDAR++G MVSR L+EF+DEDI KV+ ++++ 
Sbjct  361  TQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSW  420

Query  422  RDGT---LETEKGFSAIATTEDIKAQDYILTPGRYVGVAeveeddepfeeKMTRLTGEIA  478
            R+      E   GF  +   E++K ++YILTPGRYVG+A+VEED+EPFE+KM R+T+E++
Sbjct  421  RGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELS  480

Query  479  KCFEESNRLQEQIKKNLEAIGYGM  502
              F  S+ L++QI+K+LE++GYG+
Sbjct  481  EQFAKSKELEDQIRKSLEGLGYGV  504

84) BLLJ_1481 in NC_015067


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  494 bits (1864),  Expect = 4e-141, Method: Compositional matrix adjust.
 Identities = 296/504 (59%), Positives = 397/504 (79%), Gaps = 11/504 (2%)

Query  9    AEIGFEEQIWSAADKLRGNIDASEYKNVVLGLIFLKYISDKFDQKYQelveegegfeedr  68
            A IGFEE++W AADKLRG++DA+EYKNV LGLIFLKY+SD F++KY+EL ++  + EED+
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  69   deYASENIFFVPESARWKTIAAAAHTPEIGKAIDEAMRQIEAENNKLKGILPKNFARQEL  128
            DEY +ENIF VP  ARW+ I   A  PEIG+ ID AM  IE EN+ LKG+LPK++AR  L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  129  DKRRLGEVVDLFANVKMAEKGDSR-DILGRTYEYCLAKFAEAEGKNAGEFYTPACVVKTL  187
            DK +LG+++DLF+  K+++    + D+LGR YEY +AKFA AEGKNAGEFYTP+ +VK L
Sbjct  122  DKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  188  VEVIEPYHGRVYDPCCGSGGMFVQSADFVKRHQGNINDISVYGQESNPTTWKMATMNLAI  247
            VE+IEPY GR+YDPCCGSGGMFVQS  FV +HQG ++DI++YGQESNPTTWK+A MNLAI
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240

Query  248  RGIDADLGDHNADTFFEDLHKTEKFDFILANPPFNLKDWGGKKLENDVRWQYGTPPEGNA  307
            RGID DLG++NADTF +DLHK  K D+ILANPPFN  DWG  +L +D RWQ+G PP GNA
Sbjct  241  RGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNA  300

Query  308  NFAWVQHMIHHLNRSGRMGMVLANGALSSQTNNEGEIRAKIVDADLVEGIIAMPDKLFYS  367
            N+AW++HMI  L  +G  G VLANG++S+  ++E EIR ++++ DLVE I+++P++LFYS
Sbjct  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360

Query  368  TGIPVSLWIITKNKKQSGK------TLFIDARDMGTMVSRRLREFTDEDIAKVSTAFDAF  421
            T IPV LW+I++NK Q+GK       LFIDAR++G MVSR L+EF+DEDI KV+ ++++ 
Sbjct  361  TQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSW  420

Query  422  RDGT---LETEKGFSAIATTEDIKAQDYILTPGRYVGVAeveeddepfeeKMTRLTGEIA  478
            R+      E   GF  +   E++K ++YILTPGRYVG+A+VEED+EPFE+KM R+T+E++
Sbjct  421  RGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELS  480

Query  479  KCFEESNRLQEQIKKNLEAIGYGM  502
              F  S+ L++QI+K+LE++GYG+
Sbjct  481  EQFAKSKELEDQIRKSLEGLGYGV  504

85) Mpet_1674 in NC_014507


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  494 bits (1862),  Expect = 7e-141, Method: Compositional matrix adjust.
 Identities = 291/503 (58%), Positives = 392/503 (78%), Gaps = 9/503 (1%)

Query  7    ANIGFEQEIWSAACVLRGNMDASEYKHVVLGLIFLKYISDKFEQKYNALKeegdgfeede  66
            A IGFE+ +W AA  LRG+MDA+EYK+V LGLIFLKY+SD FE+KY+ LK++  + EED+
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  67   deYLAEGIFYVPPEARWDAIAKKAHTPEIGTTIDDAMRAIEKKNKRLKDILPKTFARPEL  126
            DEYLAE IF VP EARW+ I  +A  PEIG  ID AM AIEK N  LK++LPK +ARP L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  127  DKRRLGEVVDLFTNIQMADHGDSKDILGRAYEYCLAKFAEQEGKLAGEFYTPACVVKTIV  186
            DK +LG+++DLFT      ++  +D+LGR YEY +AKFA  EGK AGEFYTP+ +VK +V
Sbjct  122  DKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  187  EVLQPCQGRVYDPCCGSGGMFVQSAIFIENHRGNINNISVYGQDSNPTTWKMAQMNLAIR  246
            E+++P +GR+YDPCCGSGGMFVQS  F+E+H+G +++I++YGQ+SNPTTWK+A+MNLAIR
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  247  GIEADLGKFSADTFYNDLHPTLKADFIMANPPFNLSNWGADKLADDPRWKYGIPPSGNAN  306
            GI+ DLG  +ADTF NDLH  LKAD+I+ANPPFN S+WG ++L DD RW++G+PP GNAN
Sbjct  242  GIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNAN  301

Query  307  FAWMQHMIYHLAPKGRLGLVLANgslssqsggegeIRKNIVEADLVECIVAMPPQLFYTT  366
            +AW++HMI  LAP+G  G+VLANGS+S+ + +E EIRKN++E DLVECIV++P QLFY+T
Sbjct  302  YAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYST  361

Query  367  QIPVSLWFINRDKKQ------KRKTLFIDARNKGEMRTRKLRELTQEEIELIGKTVSQFE  420
            QIPV LWFI+ +K Q      K   LFIDAR+ G+M +R L+E+++E+I+ +++T     
Sbjct  362  QIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWR  421

Query  421  AGT---LEEKKGFSAVVSTEDIAKQDYILTPGRYVGIADVEDDGEPFEQKMERLTGELSE  477
            +      E+  GF  VV+ E++ +++YILTPGRYVG+ADVE+D EPFEQKM R+T+ELSE
Sbjct  422  GTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSE  481

Query  478  LFVESKKAEEEIRRQLKSVGFEV  500
             F  SK  E++IR+ L ++G+ V
Sbjct  482  QFAKSKELEDQIRKSLEGLGYGV  504

86) FP2_17100 in NC_021042


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  494 bits (1861),  Expect = 8e-141, Method: Compositional matrix adjust.
 Identities = 293/518 (57%), Positives = 394/518 (77%), Gaps = 25/518 (4%)

Query  7    ADIGFEKQIWDAACVLRGNMDASEYKGVVLGLIFLKYISDRFEDKYNQLVADGDGFEEDR  66
            A IGFE ++W+AA  LRG+MDA+EYK V LGLIFLKY+SD FE+KY++L  D  + EED+
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  67   DEYTSEGIFFVPAGARWSDVSAKAHDPEIGQVIDDAMRAIEKENARLKDILPKNFARPEL  126
            DEY +E IF VP  ARW  ++ +A  PEIGQ+ID AM AIEKEN  LK++LPK++ARP L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  127  DKRRLGEVVDLFTNIKMIEHGSEK-DILGRTYEYCLSMFAEQEGKRGGEFFTPSCVVRTL  185
            DK +LG+++DLFT +K+ +  S K D+LGR YEY ++ FA  EGK +GEF+TPS +V+ L
Sbjct  122  DKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  186  VEVLQPFKGRVYDPCCGSGGMFVQSAKFVENHSGNINDISIYGQDSNPTTWKLAQMNLAI  245
            VE+++P+KGR+YDPCCGSGGMFVQS +FVE+H G ++DI+IYGQ+SNPTTWKLA+MNLAI
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240

Query  246  RGIEPDLGKYAADTFLDDQHPTMRADYIMANPPFNLSNWGAEQLKDDVRWQYGMPPASNA  305
            RGI+ DLG   ADTF +D H  ++ADYI+ANPPFN S+WG E+L DD RWQ+G+PP +NA
Sbjct  241  RGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNA  300

Query  306  NFAWLQHMIYHLAPGGRMGMVLANGSLSSQSGGEGDIRKNIVNADLVDCIIAMPTQLFYT  365
            N+AW++HMI  LAP G  G VLANGS+S+ + +E +IRKN+++ DLV+CI+++P QLFY+
Sbjct  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360

Query  366  TQIPVSLWFISKRKKRAGKT------LFIDARKMGVMVSRKLRELTDGTKEEYKNEDGTS  419
            TQIPV LWFIS+ K + GK       LFIDAR +G MVSR L+E++D             
Sbjct  361  TQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSD-------------  407

Query  420  KNDIKKIADTYNAYVNGT---LEDVKGFCAVVDTEKIAEQDYILTPGRYVGVeeqeddge  476
             +DI+K+A+TY++         ED+ GFC VV+ E + +++YILTPGRYVG+ + E+D E
Sbjct  408  -EDIQKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEE  466

Query  477  pfeeKMARLTSELSDLFKQSHKLEAEIKEKLGAIGYEV  514
            PFE+KM R+TSELS+ F +S  LE +I+  L ++GY V
Sbjct  467  PFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

87) hsdM in NC_018645


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  491 bits (1853),  Expect = 3e-140, Method: Compositional matrix adjust.
 Identities = 278/513 (55%), Positives = 386/513 (76%), Gaps = 15/513 (2%)

Query  13   GFEESLWDSANRLRGSVESSEYKHVVLSLIFLKFVSDKFEERRAQLIAEGKEQYADMVEF  72
            GFEE LW++A++LRGS++++EYK+V L+LIFLK+VSD FEE+  +L  +   +  D  E 
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDE-  63

Query  73   YTMKNIFYLPETSRWSHIQQHAKQGDIAVRIDSALTAVEKSNASLKGALPDNYFSRLGLD  132
            Y   NIF +P  +RW  I+++AK+ +I+  ID A+ A+EK N SLKG LP +Y +R +LD
Sbjct  64   YLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-ARPALD  122

Query  133  GSKLAALIDAIN-NIDTVADKEEDVVGRVYEYFLGKFAASEGKLGGEFYTPKCVVNLIAE  191
              KL+ +ID +  +++    + +DV+GRVYEYF++KFA++EGK +GEFYTP  +V+L+ E
Sbjct  123  KEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVE  182

Query  192  MIEPYKGKIYDPCCGSGGMFVQSLKFVQSHHGNTRDISVYGQEFTATTYKLAKMNLAVRG  251
            MIEPYKG+IYDPCCGSGGMFVQS +FV+ H+G   DI++YGQE  +TT KLAKMNLA+RG
Sbjct  183  MIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRG  242

Query  252  LSANLGEVPADTFFKDQHPDLKADYIMANPPFNMKAWRAADELVNDSRWDGFETPPTGNA  311
            +  +LGE  ADTF +D H +LKADYI+ANPPFN   W + + L++D RW+ F  PP GNA
Sbjct  243  IDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYRWQ-FGVPPKGNA  300

Query  312  NYAWILHMVSKLSEHGVAGFVLANGSMSTNTKGEGAIRQKLVENDLVDCMIALPGQLFFT  371
            NYAWI HM+SKL+ +G AGFVLANGSMST+ K+E  IR++L+E+DLV+C+++LPGQLF++
Sbjct  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360

Query  372  TQIPVCLWFLTKNKKGESERGYRNREGETLFIDARKIGSMINRTQKELLPDDIAAIAKTY  431
            TQIPVCLWF+++NK   ++ G ++R  E LFIDAR IG M++RT KE+  +DI  +A+TY
Sbjct  361  TQIPVCLWFISNNK---GQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTY  417

Query  432  HAWRGEPDGQNKAKDGVYEDQAGYCKSATLEEMRKHDYVLTPGRYVGAAPLEDDGIPFET  491
            H+WRG       ++D  YED AG+CK   LEE+++++Y+LTPGRYVG A +E+D  PFE 
Sbjct  418  HSWRG-------TNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQ  470

Query  492  KMTEMSQALYAQMKESAKLDEVIRKNLEVLGYG  524
            KM  ++  L  Q   S  L++ IRK+LE LGYG
Sbjct  471  KMKRITSELSEQFAKSKELEDQIRKSLEGLGYG  503

88) Desru_3582 in NC_015589


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  491 bits (1853),  Expect = 4e-140, Method: Compositional matrix adjust.
 Identities = 292/516 (57%), Positives = 386/516 (75%), Gaps = 23/516 (4%)

Query  8    ADIGFEQQIWAAADILRGNMDAAEYKHVVLGLIFLKYISDKFEERYQELLAdd-ddvedk  66
            A IGFE+++W AAD LRG+MDAAEYK+V LGLIFLKY+SD FEE+Y+EL  D   D ED+
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  67   dAYTEANIFYVPPIARWSVIAEWAHKTGKITDENGKEEFFDIGGIIDRAMRAIEKENKRL  126
            D Y   NIF VP  ARW  I + A K              +IG +ID+AM AIEKEN  L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKP-------------EIGQLIDKAMIAIEKENESL  108

Query  127  KDVLPKNYARSELDKRRLGNVVDLFTNIQMIEHGTDKDILGRTYEYCLAKFAEQEGKRAG  186
            K+VLPK+YAR+ LDK +LG+++DLFT      ++  +D+LGR YEY +AKFA  EGK AG
Sbjct  109  KGVLPKEYARPALDKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAG  168

Query  187  EFYTPSCVVRTLVEVLKPFKGRVYDPCCGSGGMFVQSADFVSHHAGNINNLSIFGQDANP  246
            EFYTPS +V+ LVE++ P+KGR+YDPCCGSGGMFVQS  FV  H G +++++I+GQ++NP
Sbjct  169  EFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNP  228

Query  247  TTRKMALMNLAIRGIEADLGGYNADTFHNDLHPTLKADFILANPPFNLSDWNDGSLNDDP  306
            TT+K+A MNLAIRGI+ DLG  NADTFHNDLH  LKAD+ILANPPFN SDW +  L DD 
Sbjct  229  TTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDY  288

Query  307  RWKYGLPPSGNANFAWLQHMIYHLSPNGKIGMVLANGSLSSQSGGEGDIRRKIVEDDLVE  366
            RW++G+PP GNAN+AW++HMI  L+PNG  G VLANGS+S+ + +E +IR++++E+DLVE
Sbjct  289  RWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVE  348

Query  367  GIVAMPTQLFYTTQIPVSLWFINRNKKQKGKT------LFVDARKMGTMVNRRLREMTTE  420
             IV++P QLFY+TQIPV LWFI+ NK Q+GK       LF+DAR +G MV+R L+E + E
Sbjct  349  CIVTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDE  408

Query  421  DIAKIAATFEAFDNGT---LEDVKGYCAAVTTADIAKQDYILTPGRYVGIEEQEDDGEPF  477
            DI K+A T+++         ED+ G+C  V   ++ +++YILTPGRYVG+ + E+D EPF
Sbjct  409  DIQKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPF  468

Query  478  DEKMARLTSELSEMFKRSHELEDEIRKRLGAIGYDI  513
            ++KM R+TSELSE F +S ELED+IRK L ++GY++
Sbjct  469  EQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

89) Bcep1808_0009 in NC_009256


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  491 bits (1850),  Expect = 6e-140, Method: Compositional matrix adjust.
 Identities = 271/523 (52%), Positives = 385/523 (74%), Gaps = 29/523 (5%)

Query  8    TLWAAADKLRASMDAAEYKHIVLGLIFLKYISDAFCERRAQLS-AAFADESDDLFLPDAT  66
             LW AADKLR+SMDAAEYK++ LGLIFLKY+SD+F E+  +L   ++ADE          
Sbjct  9    KLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADE----------  58

Query  67   DHVVALEERDYYTMANVFWVPAVARWETLRAQAKQADIGVRIDAALEAIEADNARLKGIL  126
                  E++D Y   N+FWVP  ARW+ +  +AK+++IG  ID A+ AIE +N  LKG+L
Sbjct  59   ------EDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVL  112

Query  127  DKRFGRTQLEPGKLGELVDLIS-KIGFGEGHHAKDLLGEVYEYFLGQFATAEGKKGGQFY  185
             K ++R  L+  KLG+++DL++ K+G +   + +D+LG VYEYF+++FA+AEGK++G+FY
Sbjct  113  PKEYARPALDKEKLGDIIDLFTFKLG-DTESRKQDVLGRVYEYFIAKFASAEGKNAGEFY  171

Query  186  TPASVVRVLVEVLAPHQGRVYDPCCGSGGMFVQSEKFIESHGGRADDISIYGQEANPTTW  245
            TP+S+V++LVE++ P +GR+YDPCCGSGGMFVQSE+F+E H GR DDI+IYGQE+NPTTW
Sbjct  172  TPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTW  231

Query  246  RLVAMNLAIRGFAADLGKEPADTFHRDQHPDLRADYVLANPPFNISDWGGERLADDRRWA  305
            +L  MNLAIRG+  DLG   ADTFH D H +L+ADY+LANPPFN SDWG ERL DD RW 
Sbjct  232  KLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQ  291

Query  306  HGTPPAGNANYAWLQHILHHLSPHGQAGVVLANGSMTSNQNSEGDIRRAMVEADVIDVMV  365
             G PP GNANYAW++H++  L+P+G AG VLANGSM+++ + E +IR+ ++E D+++ +V
Sbjct  292  FGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIV  351

Query  366  ALPPQLFLNTQIPACLWFLTKDKSGAPIAGAKPGRDRRGEVLFIDARKLGRMESRVVRVF  425
            +LP QLF +TQIP CLWF++++K      G +  ++R+ E+LFIDAR +G+M SR ++ F
Sbjct  352  TLPGQLFYSTQIPVCLWFISNNK------GQNGKKERKNEILFIDAREIGHMVSRTLKEF  405

Query  426  DEEHISKIAGTVHRWRADGEDGTDEPYADVPGFCRSVKLAEIAEHGHLLTPGRYVGAEAT  485
             +E+I K+A T H WR+      D  Y D++GFC+ V+L E+ ++  +LTPGRYVG    
Sbjct  406  SDEDIQKVAQTYHSWRG----TNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADV  461

Query  486  EDDDEVFDEKMERLTSQLFEQMAKGAELDAVIREKLGRLSYAI  528
            E+D+E F++KM R+TS+L EQ AK+ EL+  IR  L  L+Y++
Sbjct  462  EEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

90) hsdM in NC_017105


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  491 bits (1850),  Expect = 7e-140, Method: Compositional matrix adjust.
 Identities = 290/497 (59%), Positives = 394/497 (80%), Gaps = 3/497 (0%)

Query  32   LGFEQQMFLAADKLRKNLEPSDYKHVALGLIFLRYISTAFEARHAELMledpeaaedpde  91
            +GFE+++  AADKLR ++++++YK+VALGLIFL+Y+S +FE +  EL  +     ED DE
Sbjct  4    IGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDE  63

Query  92   ylaeNIFWVPETARWSHLKDNARSANIGKMIDEAMLAIEKANPEQLKGVLPKDYGRPALD  151
            YLAENIFWVP  ARW  ++DNA+ ++IG++ID AM+AIEK N E LKGVLPK+Y+RPALD
Sbjct  64   YLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKEN-ESLKGVLPKEYARPALD  122

Query  152  TVMLGELIDLISDIGMGDTDDKARDVLGRVYEYFLggfagaegkrggefYTPSSVVRTLV  211
               LG++IDL++ + +GDT+ + +DVLGRVYEYF++ FA+AEGK +GEFYTPSS+V+ LV
Sbjct  123  KEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  212  SMLEPYKGRVYDPCCGSGGMFVQSERFVETHGGKLGDIAIYGQESNHTTWRLARMNLAVR  271
             M+EPYKGR+YDPCCGSGGMFVQSERFVE H G+L+DIAIYGQESN TTW+LA+MNLA+R
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  272  GIGADIRWNNEGSFLRDELKDLRFDYILANPPFNVSDWWNASLEEDPRWQYGKPPAGNAN  331
            GI+ D+   N ++F  D  K+L+ DYILANPPFN SDW +  L +D RWQ+G PP GNAN
Sbjct  242  GIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNAN  301

Query  332  YAWLQHILWHLAPDGTAGVVLANGSMSSNQNSEGEIRRRMVEADVVDCMVALPGQLFYST  391
            YAW++H++  LAP+GTAG VLANGSMS++ + E EIR+ ++E D+V+C+V+LPGQLFYST
Sbjct  302  YAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYST  361

Query  392  QIPACLWFLTRTKNPKGWRDRRGEILFIDARKLGKLVDRTRRELTDEDVARIADTYHAWR  451
            QIP CLWF++  K  +G ++R+ EILFIDAR +G +V RT +E++DED+ ++A+TYH+WR
Sbjct  362  QIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWR  421

Query  452  GEKNAGKYEDIPGFCKSATLDEVEQHGFVLTPGRYVGAEEAEEDSVPFTERFAALEKTLK  511
            G ++   YEDI+GFCK   L+EV ++ ++LTPGRYVG  + EED  PF ++   +   L 
Sbjct  422  GTNDK-YYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELS  480

Query  512  EQFAQGETLNAKITASL  528
            EQFA++  L+ +I  SL
Sbjct  481  EQFAKSKELEDQIRKSL  497

91) hsdM in NC_013211


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  491 bits (1850),  Expect = 7e-140, Method: Compositional matrix adjust.
 Identities = 290/497 (59%), Positives = 394/497 (80%), Gaps = 3/497 (0%)

Query  32   LGFEQQMFLAADKLRKNLEPSDYKHVALGLIFLRYISTAFEARHAELMledpeaaedpde  91
            +GFE+++  AADKLR ++++++YK+VALGLIFL+Y+S +FE +  EL  +     ED DE
Sbjct  4    IGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDE  63

Query  92   ylaeNIFWVPETARWSHLKDNARSANIGKMIDEAMLAIEKANPEQLKGVLPKDYGRPALD  151
            YLAENIFWVP  ARW  ++DNA+ ++IG++ID AM+AIEK N E LKGVLPK+Y+RPALD
Sbjct  64   YLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKEN-ESLKGVLPKEYARPALD  122

Query  152  TVMLGELIDLISDIGMGDTDDKARDVLGRVYEYFLggfagaegkrggefYTPSSVVRTLV  211
               LG++IDL++ + +GDT+ + +DVLGRVYEYF++ FA+AEGK +GEFYTPSS+V+ LV
Sbjct  123  KEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  212  SMLEPYKGRVYDPCCGSGGMFVQSERFVETHGGKLGDIAIYGQESNHTTWRLARMNLAVR  271
             M+EPYKGR+YDPCCGSGGMFVQSERFVE H G+L+DIAIYGQESN TTW+LA+MNLA+R
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  272  GIGADIRWNNEGSFLRDELKDLRFDYILANPPFNVSDWWNASLEEDPRWQYGKPPAGNAN  331
            GI+ D+   N ++F  D  K+L+ DYILANPPFN SDW +  L +D RWQ+G PP GNAN
Sbjct  242  GIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNAN  301

Query  332  YAWLQHILWHLAPDGTAGVVLANGSMSSNQNSEGEIRRRMVEADVVDCMVALPGQLFYST  391
            YAW++H++  LAP+GTAG VLANGSMS++ + E EIR+ ++E D+V+C+V+LPGQLFYST
Sbjct  302  YAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYST  361

Query  392  QIPACLWFLTRTKNPKGWRDRRGEILFIDARKLGKLVDRTRRELTDEDVARIADTYHAWR  451
            QIP CLWF++  K  +G ++R+ EILFIDAR +G +V RT +E++DED+ ++A+TYH+WR
Sbjct  362  QIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWR  421

Query  452  GEKNAGKYEDIPGFCKSATLDEVEQHGFVLTPGRYVGAEEAEEDSVPFTERFAALEKTLK  511
            G ++   YEDI+GFCK   L+EV ++ ++LTPGRYVG  + EED  PF ++   +   L 
Sbjct  422  GTNDK-YYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELS  480

Query  512  EQFAQGETLNAKITASL  528
            EQFA++  L+ +I  SL
Sbjct  481  EQFAKSKELEDQIRKSL  497

92) hsdM in NC_017118


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  491 bits (1850),  Expect = 7e-140, Method: Compositional matrix adjust.
 Identities = 290/497 (59%), Positives = 394/497 (80%), Gaps = 3/497 (0%)

Query  32   LGFEQQMFLAADKLRKNLEPSDYKHVALGLIFLRYISTAFEARHAELMledpeaaedpde  91
            +GFE+++  AADKLR ++++++YK+VALGLIFL+Y+S +FE +  EL  +     ED DE
Sbjct  4    IGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDE  63

Query  92   ylaeNIFWVPETARWSHLKDNARSANIGKMIDEAMLAIEKANPEQLKGVLPKDYGRPALD  151
            YLAENIFWVP  ARW  ++DNA+ ++IG++ID AM+AIEK N E LKGVLPK+Y+RPALD
Sbjct  64   YLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKEN-ESLKGVLPKEYARPALD  122

Query  152  TVMLGELIDLISDIGMGDTDDKARDVLGRVYEYFLggfagaegkrggefYTPSSVVRTLV  211
               LG++IDL++ + +GDT+ + +DVLGRVYEYF++ FA+AEGK +GEFYTPSS+V+ LV
Sbjct  123  KEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  212  SMLEPYKGRVYDPCCGSGGMFVQSERFVETHGGKLGDIAIYGQESNHTTWRLARMNLAVR  271
             M+EPYKGR+YDPCCGSGGMFVQSERFVE H G+L+DIAIYGQESN TTW+LA+MNLA+R
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  272  GIGADIRWNNEGSFLRDELKDLRFDYILANPPFNVSDWWNASLEEDPRWQYGKPPAGNAN  331
            GI+ D+   N ++F  D  K+L+ DYILANPPFN SDW +  L +D RWQ+G PP GNAN
Sbjct  242  GIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNAN  301

Query  332  YAWLQHILWHLAPDGTAGVVLANGSMSSNQNSEGEIRRRMVEADVVDCMVALPGQLFYST  391
            YAW++H++  LAP+GTAG VLANGSMS++ + E EIR+ ++E D+V+C+V+LPGQLFYST
Sbjct  302  YAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYST  361

Query  392  QIPACLWFLTRTKNPKGWRDRRGEILFIDARKLGKLVDRTRRELTDEDVARIADTYHAWR  451
            QIP CLWF++  K  +G ++R+ EILFIDAR +G +V RT +E++DED+ ++A+TYH+WR
Sbjct  362  QIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWR  421

Query  452  GEKNAGKYEDIPGFCKSATLDEVEQHGFVLTPGRYVGAEEAEEDSVPFTERFAALEKTLK  511
            G ++   YEDI+GFCK   L+EV ++ ++LTPGRYVG  + EED  PF ++   +   L 
Sbjct  422  GTNDK-YYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELS  480

Query  512  EQFAQGETLNAKITASL  528
            EQFA++  L+ +I  SL
Sbjct  481  EQFAKSKELEDQIRKSL  497

93) hsdM in NC_017122


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  491 bits (1850),  Expect = 7e-140, Method: Compositional matrix adjust.
 Identities = 290/497 (59%), Positives = 394/497 (80%), Gaps = 3/497 (0%)

Query  32   LGFEQQMFLAADKLRKNLEPSDYKHVALGLIFLRYISTAFEARHAELMledpeaaedpde  91
            +GFE+++  AADKLR ++++++YK+VALGLIFL+Y+S +FE +  EL  +     ED DE
Sbjct  4    IGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDE  63

Query  92   ylaeNIFWVPETARWSHLKDNARSANIGKMIDEAMLAIEKANPEQLKGVLPKDYGRPALD  151
            YLAENIFWVP  ARW  ++DNA+ ++IG++ID AM+AIEK N E LKGVLPK+Y+RPALD
Sbjct  64   YLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKEN-ESLKGVLPKEYARPALD  122

Query  152  TVMLGELIDLISDIGMGDTDDKARDVLGRVYEYFLggfagaegkrggefYTPSSVVRTLV  211
               LG++IDL++ + +GDT+ + +DVLGRVYEYF++ FA+AEGK +GEFYTPSS+V+ LV
Sbjct  123  KEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  212  SMLEPYKGRVYDPCCGSGGMFVQSERFVETHGGKLGDIAIYGQESNHTTWRLARMNLAVR  271
             M+EPYKGR+YDPCCGSGGMFVQSERFVE H G+L+DIAIYGQESN TTW+LA+MNLA+R
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  272  GIGADIRWNNEGSFLRDELKDLRFDYILANPPFNVSDWWNASLEEDPRWQYGKPPAGNAN  331
            GI+ D+   N ++F  D  K+L+ DYILANPPFN SDW +  L +D RWQ+G PP GNAN
Sbjct  242  GIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNAN  301

Query  332  YAWLQHILWHLAPDGTAGVVLANGSMSSNQNSEGEIRRRMVEADVVDCMVALPGQLFYST  391
            YAW++H++  LAP+GTAG VLANGSMS++ + E EIR+ ++E D+V+C+V+LPGQLFYST
Sbjct  302  YAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYST  361

Query  392  QIPACLWFLTRTKNPKGWRDRRGEILFIDARKLGKLVDRTRRELTDEDVARIADTYHAWR  451
            QIP CLWF++  K  +G ++R+ EILFIDAR +G +V RT +E++DED+ ++A+TYH+WR
Sbjct  362  QIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWR  421

Query  452  GEKNAGKYEDIPGFCKSATLDEVEQHGFVLTPGRYVGAEEAEEDSVPFTERFAALEKTLK  511
            G ++   YEDI+GFCK   L+EV ++ ++LTPGRYVG  + EED  PF ++   +   L 
Sbjct  422  GTNDK-YYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELS  480

Query  512  EQFAQGETLNAKITASL  528
            EQFA++  L+ +I  SL
Sbjct  481  EQFAKSKELEDQIRKSL  497

94) hsdM in NC_017113


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  491 bits (1850),  Expect = 7e-140, Method: Compositional matrix adjust.
 Identities = 290/497 (59%), Positives = 394/497 (80%), Gaps = 3/497 (0%)

Query  32   LGFEQQMFLAADKLRKNLEPSDYKHVALGLIFLRYISTAFEARHAELMledpeaaedpde  91
            +GFE+++  AADKLR ++++++YK+VALGLIFL+Y+S +FE +  EL  +     ED DE
Sbjct  4    IGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDE  63

Query  92   ylaeNIFWVPETARWSHLKDNARSANIGKMIDEAMLAIEKANPEQLKGVLPKDYGRPALD  151
            YLAENIFWVP  ARW  ++DNA+ ++IG++ID AM+AIEK N E LKGVLPK+Y+RPALD
Sbjct  64   YLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKEN-ESLKGVLPKEYARPALD  122

Query  152  TVMLGELIDLISDIGMGDTDDKARDVLGRVYEYFLggfagaegkrggefYTPSSVVRTLV  211
               LG++IDL++ + +GDT+ + +DVLGRVYEYF++ FA+AEGK +GEFYTPSS+V+ LV
Sbjct  123  KEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  212  SMLEPYKGRVYDPCCGSGGMFVQSERFVETHGGKLGDIAIYGQESNHTTWRLARMNLAVR  271
             M+EPYKGR+YDPCCGSGGMFVQSERFVE H G+L+DIAIYGQESN TTW+LA+MNLA+R
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  272  GIGADIRWNNEGSFLRDELKDLRFDYILANPPFNVSDWWNASLEEDPRWQYGKPPAGNAN  331
            GI+ D+   N ++F  D  K+L+ DYILANPPFN SDW +  L +D RWQ+G PP GNAN
Sbjct  242  GIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNAN  301

Query  332  YAWLQHILWHLAPDGTAGVVLANGSMSSNQNSEGEIRRRMVEADVVDCMVALPGQLFYST  391
            YAW++H++  LAP+GTAG VLANGSMS++ + E EIR+ ++E D+V+C+V+LPGQLFYST
Sbjct  302  YAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYST  361

Query  392  QIPACLWFLTRTKNPKGWRDRRGEILFIDARKLGKLVDRTRRELTDEDVARIADTYHAWR  451
            QIP CLWF++  K  +G ++R+ EILFIDAR +G +V RT +E++DED+ ++A+TYH+WR
Sbjct  362  QIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWR  421

Query  452  GEKNAGKYEDIPGFCKSATLDEVEQHGFVLTPGRYVGAEEAEEDSVPFTERFAALEKTLK  511
            G ++   YEDI+GFCK   L+EV ++ ++LTPGRYVG  + EED  PF ++   +   L 
Sbjct  422  GTNDK-YYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELS  480

Query  512  EQFAQGETLNAKITASL  528
            EQFA++  L+ +I  SL
Sbjct  481  EQFAKSKELEDQIRKSL  497

95) hsdM in NC_017126


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  491 bits (1850),  Expect = 7e-140, Method: Compositional matrix adjust.
 Identities = 290/497 (59%), Positives = 394/497 (80%), Gaps = 3/497 (0%)

Query  32   LGFEQQMFLAADKLRKNLEPSDYKHVALGLIFLRYISTAFEARHAELMledpeaaedpde  91
            +GFE+++  AADKLR ++++++YK+VALGLIFL+Y+S +FE +  EL  +     ED DE
Sbjct  4    IGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDE  63

Query  92   ylaeNIFWVPETARWSHLKDNARSANIGKMIDEAMLAIEKANPEQLKGVLPKDYGRPALD  151
            YLAENIFWVP  ARW  ++DNA+ ++IG++ID AM+AIEK N E LKGVLPK+Y+RPALD
Sbjct  64   YLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKEN-ESLKGVLPKEYARPALD  122

Query  152  TVMLGELIDLISDIGMGDTDDKARDVLGRVYEYFLggfagaegkrggefYTPSSVVRTLV  211
               LG++IDL++ + +GDT+ + +DVLGRVYEYF++ FA+AEGK +GEFYTPSS+V+ LV
Sbjct  123  KEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  212  SMLEPYKGRVYDPCCGSGGMFVQSERFVETHGGKLGDIAIYGQESNHTTWRLARMNLAVR  271
             M+EPYKGR+YDPCCGSGGMFVQSERFVE H G+L+DIAIYGQESN TTW+LA+MNLA+R
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  272  GIGADIRWNNEGSFLRDELKDLRFDYILANPPFNVSDWWNASLEEDPRWQYGKPPAGNAN  331
            GI+ D+   N ++F  D  K+L+ DYILANPPFN SDW +  L +D RWQ+G PP GNAN
Sbjct  242  GIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNAN  301

Query  332  YAWLQHILWHLAPDGTAGVVLANGSMSSNQNSEGEIRRRMVEADVVDCMVALPGQLFYST  391
            YAW++H++  LAP+GTAG VLANGSMS++ + E EIR+ ++E D+V+C+V+LPGQLFYST
Sbjct  302  YAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYST  361

Query  392  QIPACLWFLTRTKNPKGWRDRRGEILFIDARKLGKLVDRTRRELTDEDVARIADTYHAWR  451
            QIP CLWF++  K  +G ++R+ EILFIDAR +G +V RT +E++DED+ ++A+TYH+WR
Sbjct  362  QIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWR  421

Query  452  GEKNAGKYEDIPGFCKSATLDEVEQHGFVLTPGRYVGAEEAEEDSVPFTERFAALEKTLK  511
            G ++   YEDI+GFCK   L+EV ++ ++LTPGRYVG  + EED  PF ++   +   L 
Sbjct  422  GTNDK-YYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELS  480

Query  512  EQFAQGETLNAKITASL  528
            EQFA++  L+ +I  SL
Sbjct  481  EQFAKSKELEDQIRKSL  497

96) hsdM in NC_017131


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  491 bits (1850),  Expect = 7e-140, Method: Compositional matrix adjust.
 Identities = 290/497 (59%), Positives = 394/497 (80%), Gaps = 3/497 (0%)

Query  32   LGFEQQMFLAADKLRKNLEPSDYKHVALGLIFLRYISTAFEARHAELMledpeaaedpde  91
            +GFE+++  AADKLR ++++++YK+VALGLIFL+Y+S +FE +  EL  +     ED DE
Sbjct  4    IGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDE  63

Query  92   ylaeNIFWVPETARWSHLKDNARSANIGKMIDEAMLAIEKANPEQLKGVLPKDYGRPALD  151
            YLAENIFWVP  ARW  ++DNA+ ++IG++ID AM+AIEK N E LKGVLPK+Y+RPALD
Sbjct  64   YLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKEN-ESLKGVLPKEYARPALD  122

Query  152  TVMLGELIDLISDIGMGDTDDKARDVLGRVYEYFLggfagaegkrggefYTPSSVVRTLV  211
               LG++IDL++ + +GDT+ + +DVLGRVYEYF++ FA+AEGK +GEFYTPSS+V+ LV
Sbjct  123  KEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  212  SMLEPYKGRVYDPCCGSGGMFVQSERFVETHGGKLGDIAIYGQESNHTTWRLARMNLAVR  271
             M+EPYKGR+YDPCCGSGGMFVQSERFVE H G+L+DIAIYGQESN TTW+LA+MNLA+R
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  272  GIGADIRWNNEGSFLRDELKDLRFDYILANPPFNVSDWWNASLEEDPRWQYGKPPAGNAN  331
            GI+ D+   N ++F  D  K+L+ DYILANPPFN SDW +  L +D RWQ+G PP GNAN
Sbjct  242  GIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNAN  301

Query  332  YAWLQHILWHLAPDGTAGVVLANGSMSSNQNSEGEIRRRMVEADVVDCMVALPGQLFYST  391
            YAW++H++  LAP+GTAG VLANGSMS++ + E EIR+ ++E D+V+C+V+LPGQLFYST
Sbjct  302  YAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYST  361

Query  392  QIPACLWFLTRTKNPKGWRDRRGEILFIDARKLGKLVDRTRRELTDEDVARIADTYHAWR  451
            QIP CLWF++  K  +G ++R+ EILFIDAR +G +V RT +E++DED+ ++A+TYH+WR
Sbjct  362  QIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWR  421

Query  452  GEKNAGKYEDIPGFCKSATLDEVEQHGFVLTPGRYVGAEEAEEDSVPFTERFAALEKTLK  511
            G ++   YEDI+GFCK   L+EV ++ ++LTPGRYVG  + EED  PF ++   +   L 
Sbjct  422  GTNDK-YYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELS  480

Query  512  EQFAQGETLNAKITASL  528
            EQFA++  L+ +I  SL
Sbjct  481  EQFAKSKELEDQIRKSL  497

97) hsdM in NC_017149


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  491 bits (1850),  Expect = 7e-140, Method: Compositional matrix adjust.
 Identities = 290/497 (59%), Positives = 394/497 (80%), Gaps = 3/497 (0%)

Query  32   LGFEQQMFLAADKLRKNLEPSDYKHVALGLIFLRYISTAFEARHAELMledpeaaedpde  91
            +GFE+++  AADKLR ++++++YK+VALGLIFL+Y+S +FE +  EL  +     ED DE
Sbjct  4    IGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDE  63

Query  92   ylaeNIFWVPETARWSHLKDNARSANIGKMIDEAMLAIEKANPEQLKGVLPKDYGRPALD  151
            YLAENIFWVP  ARW  ++DNA+ ++IG++ID AM+AIEK N E LKGVLPK+Y+RPALD
Sbjct  64   YLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKEN-ESLKGVLPKEYARPALD  122

Query  152  TVMLGELIDLISDIGMGDTDDKARDVLGRVYEYFLggfagaegkrggefYTPSSVVRTLV  211
               LG++IDL++ + +GDT+ + +DVLGRVYEYF++ FA+AEGK +GEFYTPSS+V+ LV
Sbjct  123  KEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  212  SMLEPYKGRVYDPCCGSGGMFVQSERFVETHGGKLGDIAIYGQESNHTTWRLARMNLAVR  271
             M+EPYKGR+YDPCCGSGGMFVQSERFVE H G+L+DIAIYGQESN TTW+LA+MNLA+R
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  272  GIGADIRWNNEGSFLRDELKDLRFDYILANPPFNVSDWWNASLEEDPRWQYGKPPAGNAN  331
            GI+ D+   N ++F  D  K+L+ DYILANPPFN SDW +  L +D RWQ+G PP GNAN
Sbjct  242  GIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNAN  301

Query  332  YAWLQHILWHLAPDGTAGVVLANGSMSSNQNSEGEIRRRMVEADVVDCMVALPGQLFYST  391
            YAW++H++  LAP+GTAG VLANGSMS++ + E EIR+ ++E D+V+C+V+LPGQLFYST
Sbjct  302  YAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYST  361

Query  392  QIPACLWFLTRTKNPKGWRDRRGEILFIDARKLGKLVDRTRRELTDEDVARIADTYHAWR  451
            QIP CLWF++  K  +G ++R+ EILFIDAR +G +V RT +E++DED+ ++A+TYH+WR
Sbjct  362  QIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWR  421

Query  452  GEKNAGKYEDIPGFCKSATLDEVEQHGFVLTPGRYVGAEEAEEDSVPFTERFAALEKTLK  511
            G ++   YEDI+GFCK   L+EV ++ ++LTPGRYVG  + EED  PF ++   +   L 
Sbjct  422  GTNDK-YYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELS  480

Query  512  EQFAQGETLNAKITASL  528
            EQFA++  L+ +I  SL
Sbjct  481  EQFAKSKELEDQIRKSL  497

98) FP2_13100 in NC_021042


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  490 bits (1846),  Expect = 1e-139, Method: Compositional matrix adjust.
 Identities = 299/503 (60%), Positives = 398/503 (80%), Gaps = 9/503 (1%)

Query  7    SNIGFEKQIWDAACVLRGNIDASEYKSVVLGLIFLKYISDRFEAKYKELVeegdgfeedq  66
            + IGFE ++W+AA  LRG++DA+EYK+V LGLIFLKY+SD FE KYKEL ++  + EEDQ
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  67   deYTAENIFFVPENARWSAIAAAAHTPEIGTVIDDAMRSIEKENKRLKDILPKNFARPEL  126
            DEY AENIF VP +ARW  I   A  PEIG +ID AM +IEKEN  LK++LPK++ARP L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  127  DKRRLGEVVDLFTNIQMIEHGNSKDILGRTYEYCLSKFAEQEGKLAGEFYTPSCVVRTLV  186
            DK +LG+++DLFT      ++  +D+LGR YEY ++KFA  EGK AGEFYTPS +V+ LV
Sbjct  122  DKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  187  EVLQPFNGRVYDPCCGSGGMFVQSAKFIENHGGNINKISVFGQDSNPTTWKMAQMNLAIR  246
            E+++P++GR+YDPCCGSGGMFVQS +F+E+H G ++ I+++GQ+SNPTTWK+A+MNLAIR
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  247  GIEADLGKFNADTFFNDCHPQLKADFIMANPPFNLSGWGADKLVDDVRWQYGTPPAGNAN  306
            GI+ DLG  NADTF ND H  LKAD+I+ANPPFN S+WG ++L+DD RWQ+G PP GNAN
Sbjct  242  GIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNAN  301

Query  307  FAWLQHMIWHLAPNGRIGMVLANgslssqsggegeIRKNIINADLVDCIVAMPTQLFYTT  366
            +AW++HMI  LAPNG  G VLANGS+S+ + +E EIRKN+I+ DLV+CIV++P QLFY+T
Sbjct  302  YAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYST  361

Query  367  QIPVSLWFLAKNKKQKGKT------LFIDARKLGTMVTRKLRELTDEDIKKIADTYNAFV  420
            QIPV LWF+++NK Q+GK       LFIDAR +G MV+R L+E++DEDI+K+A+TY++  
Sbjct  362  QIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWR  421

Query  421  DGT---LEDEKGFCAVVTTQDIAKQDYILTPGRYVGIeeqeddgepfeeKMGRLTSELSE  477
            +      ED  GFC VV  +++ +++YILTPGRYVG+ + E+D EPFE+KM R+TSELSE
Sbjct  422  GTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSE  481

Query  478  LFAKSHELETQIKERLGAIGYGL  500
             FAKS ELE QI+  L ++GYG+
Sbjct  482  QFAKSKELEDQIRKSLEGLGYGV  504

99) CLS_14440 in NC_021047


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  490 bits (1848),  Expect = 9e-140, Method: Compositional matrix adjust.
 Identities = 299/503 (60%), Positives = 394/503 (79%), Gaps = 9/503 (1%)

Query  7    AAIGFEKQIWDAACVLRGNMDASEYKNVVLGLIFLKYISDRFDEKYKALVeegdgfeedi  66
            A+IGFE ++W+AA  LRG+MDA+EYKNV LGLIFLKY+SD F+EKYK L ++  + EED 
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  67   deYTSEGIFFVPAGARWRDIAAKAHTPEIGTVIDDAMRAIEKENKRLKDILPKNFARPEL  126
            DEY +E IF VP  ARW+ I  +A  PEIG +ID AM AIEKEN  LK++LPK++ARP L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  127  DKRRLGDVVDLFTNIQMIEHGSEKDILGRTYEYCLSMFAEQEGKRGGEFFTPSCVVRTLV  186
            DK +LGD++DLFT      ++  +D+LGR YEY ++ FA  EGK +GEF+TPS +V+ LV
Sbjct  122  DKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  187  EVLKPFKGRVYDPCCGSGGMFVQSAKFVENHSGNISNISIYGQDSNPTTWKLAQMNLAIR  246
            E++ P+KGR+YDPCCGSGGMFVQS +FVE+H G + +I+IYGQ+SNPTTWKLA+MNLAIR
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  247  GIEPDLGPYAADTFLKDCHPTLRADYIMANPPFNLSDWGLDKLKEDQRWKYGTPPAGNAN  306
            GI+ DLG   ADTF +D H  L+ADYI+ANPPFN SDWG ++L +D RW++G PP GNAN
Sbjct  242  GIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNAN  301

Query  307  FAWLQHMIYHLAPAGRIGMVLANgslssqsggegeIRKNIINADLVECIVAMPTQLFYTT  366
            +AW++HMI  LAP G  G VLANGS+S+ + +E EIRKN+I+ DLVECIV++P QLFY+T
Sbjct  302  YAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYST  361

Query  367  QIPVSLWFINKQKKQSGKT------LFIDARKMGTMVNRKLRELTDADINKISDTYEAFV  420
            QIPV LWFI+++K Q+GK       LFIDAR +G MV+R L+E++D DI+K+++TY++  
Sbjct  362  QIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWR  421

Query  421  DGT---LENIKGFCAVADTAEIEKQNYILTPGRYVGIeeqeeddepfeeKMTRLTSELSN  477
            +      E+I GFC V +  E+ +++YILTPGRYVG+ + EED+EPFE+KM R+TSELS+
Sbjct  422  GTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSE  481

Query  478  MFAKSHELEDEIRKKLGAIGYEV  500
             FAKS ELED+IRK L ++GY V
Sbjct  482  QFAKSKELEDQIRKSLEGLGYGV  504

100) ECS88_4968 in NC_011742


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  489 bits (1843),  Expect = 2e-139, Method: Compositional matrix adjust.
 Identities = 282/525 (54%), Positives = 393/525 (75%), Gaps = 26/525 (4%)

Query  14   GFEETLWDTANQLRGSVESSEYKHVVLSLVFLKFISDKFEARRKKMIADGQADFLEMEVF  73
            GFEE LW++A++LRGS++++EYK+V L+L+FLK++SD FE + K +  D  AD  + +  
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDE-  63

Query  74   YQQDNIFYLPEEARWSFIKQNAKQDDIAVRIDTALSTIEKRNPTLKGALPDNYFSRQNLE  133
            Y  +NIF +P EARW +I++NAK+ +I+  ID A+ +IEK N +LKG LP +Y +R  L+
Sbjct  64   YLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-ARPALD  122

Query  134  TKKLASLIDTIDNIETLAHETDVETLSKEDLVGRVYEYFLGKFAATEGKGGGEFYTPKCV  193
              KL+ +ID +     L++        K+D++GRVYEYF++KFA++EGK +GEFYTP  +
Sbjct  123  KEKLGDIIDLFTF--KLGDTES----RKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSI  176

Query  194  VTLLTEMLEPFQGKIYDPCCGSAGMFVQSVKFVESHQGKSRDIALYGQELTATTYKLAKM  253
            V LL EM+EP++G+IYDPCCGS+GMFVQS +FVE HQG+  DIA+YGQE  +TT KLAKM
Sbjct  177  VKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKM  236

Query  254  NLAIRGLSANLGERPADTFFSDQHPDLKADYILANPPFNLKDWRNEAELTKDPRFAGYRM  313
            NLAIRG+  +LGER ADTF +D H +LKADYILANPPFN  DW  +  L  D R   + +
Sbjct  237  NLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYRWQ-FGV  294

Query  314  PPTGNANYGWILHMLSKLSANGTAGFVLANGSMSSNTSGEGEIRAQMIENDLIDCMIALP  373
            PP GNANY+WI HM+SKL++NGTAGFVLANGSMS++  +E EIR ++IE+DL++C+++LP
Sbjct  295  PPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLP  354

Query  374  GQLFYTTQIPVCLWFMTKSKAADPAKGYRDRQGETLFIDARNLGTMISRTTKELTAEDIA  433
            GQLFY+TQIPVCLWF++++K+ +  K   +R+ E LFIDAR++G M+SRT KE++ EDI 
Sbjct  355  GQLFYSTQIPVCLWFISNNKGQNGKK---ERKNEILFIDAREIGHMVSRTLKEFSDEDIQ  411

Query  434  TIADTYHAWRSTPEELAARIARGDSKLEKYEDQAGFCKVATLQDIKDNDYVLTPGRYVGA  493
             +A+TYH+WR+T +               YED AGFCKV  L+++K+N+Y+LTPGRYVG 
Sbjct  412  KVAQTYHSWRGTNDKY-------------YEDIAGFCKVVNLEEVKNNEYILTPGRYVGL  458

Query  494  AEQEEDGVAFETKMRELSKTLFEQMKQAEELDRAIRQNLEGLGYG  538
            A+ EED  +FE KM+ ++  L EQ  ++ EL+  IR++LEGLGYG
Sbjct  459  ADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYG  503

101) ECNA114_4590 in NC_017644


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  489 bits (1842),  Expect = 3e-139, Method: Compositional matrix adjust.
 Identities = 280/525 (54%), Positives = 394/525 (76%), Gaps = 26/525 (4%)

Query  14   GFEETLWDTANQLRGSVESSEYKHVVLSLVFLKFISDKFEARRKKMIADGQADFLEMEVF  73
            GFEE LW++A++LRGS++++EYK+V L+L+FLK++SD FE + K +  D  AD  + +  
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDE-  63

Query  74   YQQDNIFYLPEEARWSFIKQNAKQDDIAVRIDTALSTIEKRNPTLKGALPDNYFSRQNLE  133
            Y  +NIF +P EARW +I++NAK+ +I+  ID A+ +IEK N +LKG LP +Y +R  L+
Sbjct  64   YLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-ARPALD  122

Query  134  TKKLASLIDTIDNIETLAHETDVETLSKEDLVGRVYEYFLGKFAATEGKGGGEFYTPKCV  193
              KL+ +ID +     L++        K+D++GRVYEYF++KFA++EGK +GEFYTP  +
Sbjct  123  KEKLGDIIDLFTF--KLGDTES----RKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSI  176

Query  194  VTLLTEMLEPFQGKIYDPCCGSAGMFVQSVKFVESHQGKSRDIALYGQELTATTYKLAKM  253
            V LL EM+EP++G+IYDPCCGS+GMFVQS +FVE HQG+  DIA+YGQE  +TT KLAKM
Sbjct  177  VKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKM  236

Query  254  NLAIRGLSANLGERPANTFFSDQHPDLKADYILANPPFNLKDWRNEAELTEDPRFAGYRM  313
            NLAIRG+  +LGER A+TF +D H +LKADYILANPPFN  DW  +  L +D R   + +
Sbjct  237  NLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYRWQ-FGV  294

Query  314  PPTGNANYGWILHMLSKLSANGTAGFVLANGSMSSNTSGEGEIRAQMIENDLIDCMIALP  373
            PP GNANY+WI HM+SKL++NGTAGFVLANGSMS++  +E EIR ++IE+DL++C+++LP
Sbjct  295  PPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLP  354

Query  374  GQLFYTTQIPVCLWFMTKSKAADPAKGYRDRQGETLFIDARNLGTMISRTTKELTAEDIA  433
            GQLFY+TQIPVCLWF++++K+ +  K   +R+ E LFIDAR++G M+SRT KE++ EDI 
Sbjct  355  GQLFYSTQIPVCLWFISNNKGQNGKK---ERKNEILFIDAREIGHMVSRTLKEFSDEDIQ  411

Query  434  TIADTYHAWRSTPEELAARIARGDSKLEKYEDQAGFCKVATLQDIKDNDYVLTPGRYVGA  493
             +A+TYH+WR+T +               YED AGFCKV  L+++K+N+Y+LTPGRYVG 
Sbjct  412  KVAQTYHSWRGTNDKY-------------YEDIAGFCKVVNLEEVKNNEYILTPGRYVGL  458

Query  494  AEQEEDGVAFETKMRELSKTLFEQMKQAEELDRAIRQNLEALGYG  538
            A+ EED  +FE KM+ ++  L EQ  ++ EL+  IR++LE+LGYG
Sbjct  459  ADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYG  503

102) MM_2198 in NC_003901


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  488 bits (1840),  Expect = 4e-139, Method: Compositional matrix adjust.
 Identities = 272/460 (60%), Positives = 371/460 (81%), Gaps = 7/460 (1%)

Query  4    FEKQLWKAADKLRKNIDAAEYKHIVLGLIFLRYISDAFEELYEKLQQGEGEYAGADPEDR  63
            FE +LW+AADKLR ++DAAEYK++ LGLIFL+Y+SD+FEE Y  L+Q+   YA  D ED+
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDP--YA--DEEDQ  61

Query  64   DEYKAENVFFVPAISRWPYLQSEAKKPDIGKSVDNAMDAIEKENPLLRGVLPKVFARGNL  123
            DEY AEN+F VP  +RW Y++ +AKKP+IG+ +D+AM AIEKEN  L+GVLPK +AR  L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  124  DPTNLGGLIDLVSNVALGDAKSRSADVLGHVFEYFLGEFALAEGKKGGQFYTPRSVVELL  183
            D  +LG++IDL +   LGD+ SR  DVLG+V+EYF++ FA AEGK++G+FYTP S+V LL
Sbjct  122  DKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  184  VEMLEPYNGRVFDPCCGSGGMFVQSEKFVADHQGKINDISIYGQESNQTTWRLAKMNLAI  243
            VEM+EPY+GR++DPCCGSGGMFVQSE+FV  HQG+++DI+IYGQESN TTW+LAKMNLAI
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240

Query  244  RSIDSSQVKWNNEGSFLNDVHKDLKADYVIANPPFNDSDWSGDLLRKDGRWKYGVPPAGN  303
            R+ID+    +N + +F ND+HK+LKADY++ANPPFN SDW+ + L  D RW++GVPP GN
Sbjct  241  RGIDNDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGN  299

Query  304  ANYAWIQHFLYHLGPSGQAGFVLAKGSLTSKSSGEGDIRKELVEARLVDCIVNLPPKLFL  363
            ANYAWI+H +  L+P+G AGFVLA+GS+++ + +E +IRK+L+E  LV+CIV LP +LF 
Sbjct  300  ANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFY  359

Query  364  NTQIPASLWFLSRNKANGKHRNRTDEILFIDARNMGHLINRRTREFSPEDIQQIAGTYHK  423
            +TQIP  LWF+S NK++   ++R +EILFIDAR++GH+++R  +EFS EDIQ++A TYH 
Sbjct  360  STQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHS  419

Query  424  WRNPEGN-YEDVKGFCNSAPIERVRELGYVLTPGRYVGLP  462
            WR  +++ YED+ GFC+   +E V++  Y+LTPGRYVGL+
Sbjct  420  WRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLA  459

103) hsdM in NC_017663


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  488 bits (1839),  Expect = 5e-139, Method: Compositional matrix adjust.
 Identities = 281/525 (54%), Positives = 393/525 (75%), Gaps = 26/525 (4%)

Query  14   GFEETLWDTANQLRGSVESSEYKHVVLSLVFLKFISDKFEARRKKMIADGQADFLEMEVF  73
            GFEE LW++A++LRGS++++EYK+V L+L+FLK++SD FE + K +  D  AD  + +  
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDE-  63

Query  74   YQQDNIFYLPEEARWSFIKQNAKQDDIAVRIDTALSTIEKRNPTLKGALPDNYFSRQNLE  133
            Y  +NIF +P EARW +I++NAK+ +I+  ID A+ +IEK N +LKG LP +Y +R  L+
Sbjct  64   YLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-ARPALD  122

Query  134  TKKLASLIDTIDNIETLAHETDVETLSKEDLVGRVYEYFLGKFAATEGKGGGEFYTPKCV  193
              KL+ +ID +     L++        K+D++GRVYEYF++KFA++EGK +GEFYTP  +
Sbjct  123  KEKLGDIIDLFTF--KLGDTES----RKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSI  176

Query  194  VTLLTEMLEPFQGKIYDPCCGSAGMFVQSVKFVESHQGKSRDIALYGQELTATTYKLAKM  253
            V LL EM+EP++G+IYDPCCGS+GMFVQS +FVE HQG+  DIA+YGQE  +TT KLAKM
Sbjct  177  VKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKM  236

Query  254  NLAIRGLSANLGERPADTFFSDQHPDLKADYILANPPFNLKDWRNEAELTKDPRFAGYRM  313
            NLAIRG+  +LGER ADTF +D H +LKADYILANPPFN  DW  +  L  D R   + +
Sbjct  237  NLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYRWQ-FGV  294

Query  314  PPTGNANYGWILHMLSKLSANGTAGFVLANGSMSSNTSGEGEIRAQMIENDLIDCMIALP  373
            PP GNANY+WI HM+SKL++NGTAGFVLANGSMS++  +E EIR ++IE+DL++C+++LP
Sbjct  295  PPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLP  354

Query  374  GQLFYTTQIPVCLWFMTKSKAADPAKGYRDRQGETLFIDARNLGTMISRTTKELTTEDIA  433
            GQLFY+TQIPVCLWF++++K+ +  K   +R+ E LFIDAR++G M+SRT KE++ EDI 
Sbjct  355  GQLFYSTQIPVCLWFISNNKGQNGKK---ERKNEILFIDAREIGHMVSRTLKEFSDEDIQ  411

Query  434  TIADTYHAWRSTPEELAARIARGDSKLEKYEDQAGFCKVATLQDIKDNDYVLTPGRYVGA  493
             +A+TYH+WR+T +               YED AGFCKV  L+++K+N+Y+LTPGRYVG 
Sbjct  412  KVAQTYHSWRGTNDKY-------------YEDIAGFCKVVNLEEVKNNEYILTPGRYVGL  458

Query  494  AEQEEDGVAFETKMRELSKTLFEQMKQAEELDRAIRQNLEALGYG  538
            A+ EED  +FE KM+ ++  L EQ  ++ EL+  IR++LE+LGYG
Sbjct  459  ADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYG  503

104) MmTuc01_2250 in NC_020389


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  487 bits (1835),  Expect = 1e-138, Method: Compositional matrix adjust.
 Identities = 271/461 (59%), Positives = 372/461 (81%), Gaps = 7/461 (1%)

Query  3    DFEKQLWKAADKLRKNIDAAEYKHIVLGLIFLRYISDAFEELYEKLQQGEGEYAGADPED  62
            +FE +LW+AADKLR ++DAAEYK++ LGLIFL+Y+SD+FEE Y  L+Q+   YA  D ED
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDP--YA--DEED  60

Query  63   RDEYKAENVFFVPAISRWPYLQSEAKKPDIGKSVDNAMDAIEKENPLLRGVLPKVFARGN  122
            +DEY AEN+F VP  +RW Y++ +AKKP+IG+ +D+AM AIEKEN  L+GVLPK +AR  
Sbjct  61   QDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPA  120

Query  123  LDPTNLGGLIDLVSNVALGDAKSRSADVLGHVFEYFLGEFALAEGKKGGQFYTPRSVVEL  182
            LD  +LG++IDL +   LGD+ SR  DVLG+V+EYF++ FA AEGK++G+FYTP S+V L
Sbjct  121  LDKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKL  179

Query  183  LVEMLEPYNGRVFDPCCGSGGMFVQSEKFVADHQGKINDISIYGQESNQTTWRLAKMNLA  242
            LVEM+EPY+GR++DPCCGSGGMFVQSE+FV  HQG+++DI+IYGQESN TTW+LAKMNLA
Sbjct  180  LVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLA  239

Query  243  IRSIDSSQVKWNNEGSFLNDVHKDLKADYVIANPPFNDSDWSGDLLRKDGRWKYGVPPAG  302
            IR+ID+    +N + +F ND+HK+LKADY++ANPPFN SDW+ + L  D RW++GVPP G
Sbjct  240  IRGIDNDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKG  298

Query  303  NANYAWIQHFLYHLGPSGQAGFVLAKGSLTSKSSGEGDIRKELVEARLIDCIVNLPPKLF  362
            NANYAWI+H +  L+P+G AGFVLA+GS+++ + +E +IRK+L+E  L++CIV LP +LF
Sbjct  299  NANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLF  358

Query  363  LNTQIPASLWFLSRNKANGKHRNRTDEILFIDARNMGHLINRRTREFSPEDIQQIAGTYH  422
             +TQIP  LWF+S NK++   ++R +EILFIDAR++GH+++R  +EFS EDIQ++A TYH
Sbjct  359  YSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYH  418

Query  423  KWRNPEGN-YEDVKGFCNSAPIERVRELGYVLTPGRYVGLP  462
             WR  +++ YED+ GFC+   +E V++  Y+LTPGRYVGL+
Sbjct  419  SWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLA  459

105) Desgi_1008 in NC_021184


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  487 bits (1837),  Expect = 7e-139, Method: Compositional matrix adjust.
 Identities = 272/465 (59%), Positives = 377/465 (82%), Gaps = 7/465 (1%)

Query  14   IEKQLWKAADKLRKNIDAAEYKHIILGLIFLKYISNAFEELYQKLEKGEGEYAGADPEDK  73
            +E +LW+AADKLR ++DAAEYK++ LGLIFLKY+S++FEE Y+ L   ++ YA  D ED+
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELK--QDPYA--DEEDQ  61

Query  74   DEYKAENVFFVPEKARWSYLQSRAKLPEIGKDVDDAMDAIEKENPSLKDVLPKVYARGNL  133
            DEY AEN+F VP  ARW Y++  AK PEIG+ +D AM AIEKEN SLK+VLPK YAR  L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  134  DPTNLGGLIDLVGNIALGEAKARSADILGHVFEYFLGEFALAEGKKGGQFYTPRSVVELL  193
            D  +LG++IDL   + LG++ +R  D+LG+V+EYF++ FA AEGK++G+FYTP S+V LL
Sbjct  122  DKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  194  VEMLEPYKGRVFDPCCGSGGMFVQSEKFVKDRQGRVNDISIFGQESNQTTWRLAKMNLAI  253
            VEM+EPYKGR++DPCCGSGGMFVQSE+FV  +QGR++DI+I+GQESN TTW+LAKMNLAI
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240

Query  254  RGIDSSQVKWNSEGSFLNDSHKDLKADYVIANPPFNDSDWGGDLLRKDGRWKYGTPPTGN  313
            RGID+    +N++ +F ND HK+LKADY++ANPPFN SDWG + L  D RW++G PP GN
Sbjct  241  RGIDNDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGN  299

Query  314  ANYAWIQHFIYHLSPSGQAGFVLAKGALTSKSSGEGDIRKELVEARLIDCIINLPAKLFL  373
            ANYAWI+H I  L+P+G AGFVLA+G++++ + +E +IRK+L+E  L++CI+ LP++LF 
Sbjct  300  ANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFY  359

Query  374  NTQIPASLWFLSRNKENGKFRNRRDEILFIDARNMGHLINRRTRELSKEDIQKIAETYHN  433
            +TQIP  LWF+S NK +   ++R++EILFIDAR++GH+++R  +E+S EDIQK+A+TYH+
Sbjct  360  STQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHS  419

Query  434  WRNPDGN-YEDIKGFCNSASIERVRELDYVLTPGRYVGLPEDEDD  477
            WR  +++ YEDI GFC+  ++E V++ +Y+LTPGRYVGL++ E+D
Sbjct  420  WRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEED  464

106) Pcryo_1359 in NC_007969


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  487 bits (1837),  Expect = 7e-139, Method: Compositional matrix adjust.
 Identities = 275/514 (54%), Positives = 386/514 (76%), Gaps = 16/514 (3%)

Query  16   NFEEALWDAANKLRGSVESSEYKHIVLSLIFLKFISDTFEQQRQKLIDTGYEKHINMVQA  75
             FEE LW+AA+KLRGS++++EYK++ L+LIFLK++SD+FE++ + L +  Y  + +  + 
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ-DE  63

Query  76   YTKDNVFYLPEESRWSFIQQNAKQEDIALKIDTALSTIEKTNQSLKGALPDNYFSRLGLT  135
            Y  +N+F +P E+RW +I++NAK+ +I+  ID A+ +IEK N+SLKG LP +Y +R +L 
Sbjct  64   YLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-ARPALD  122

Query  136  ASKLAALIDVVN-NIDTIGNPEEDTVGRVYEYFLGKFAATEGKGGGEFYTPKSVVNLIAE  194
              KL+ +ID+   +++   +  +D +GRVYEYF++KFA++EGK +GEFYTP S+V+L+ E
Sbjct  123  KEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVE  182

Query  195  MVEPYQGKIYDPCCGSGGMFVQSIKFIESHHGNTKDVSIYGQEYTSTTYKLAKMNLAIRG  254
            M+EPY+G+IYDPCCGSGGMFVQS +F+E H+G   D++IYGQE  +TT KLAKMNLAIRG
Sbjct  183  MIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRG  242

Query  255  ISSNLGDVAADTFFKDQHEDLKADFIMANPPFNQKDWRASDELVDDPRWAGYPTPPTGNA  314
            I ++LG+  ADTF +D H +LKAD+I+ANPPFN  DW + + L+DD RW  +  PP GNA
Sbjct  243  IDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYRWQ-FGVPPKGNA  300

Query  315  NYAWILHMISKLSEHGTAGFVLANGSMSTTTSGEGEIREQIIKNDLVDCMIALPGQLFYT  374
            NYAWI HMISKL+ +GTAGFVLANGSMST+  +E EIR ++I +DLV+C+++LPGQLFY+
Sbjct  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360

Query  375  TQIPVCLWFISKDKQATSADSKAKGLRNRSGETLFIDARNIGAMIDRTHKEFSTDDIEAI  434
            TQIPVCLWFIS++K         +G ++R  E LFIDAR+IG M+ RT KEFS +DI+ +
Sbjct  361  TQIPVCLWFISNNKG-------QNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKV  413

Query  435  AKTYHAWRgekeaggyeayadeagyCKSASLDDIKANDYVLTPGRYVGAAAIEDDGIPFE  494
            A+TYH+WR    +     Y D AG+CK  +L+++K N+Y+LTPGRYVG A +E+D  PFE
Sbjct  414  AQTYHSWR----GTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFE  469

Query  495  TKMLELSQTLYAQMQESEKLDATIRQNLEVLGYG  528
             KM  ++  L  Q   S  L+  IR++LE LGYG
Sbjct  470  QKMKRITSELSEQFAKSKELEDQIRKSLEGLGYG  503

107) PSYCG_07145 in NC_021661


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  487 bits (1837),  Expect = 7e-139, Method: Compositional matrix adjust.
 Identities = 275/514 (54%), Positives = 386/514 (76%), Gaps = 16/514 (3%)

Query  16   NFEEALWDAANKLRGSVESSEYKHIVLSLIFLKFISDTFEQQRQKLIDTGYEKHINMVQA  75
             FEE LW+AA+KLRGS++++EYK++ L+LIFLK++SD+FE++ + L +  Y  + +  + 
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ-DE  63

Query  76   YTKDNVFYLPEESRWSFIQQNAKQEDIALKIDTALSTIEKTNQSLKGALPDNYFSRLGLT  135
            Y  +N+F +P E+RW +I++NAK+ +I+  ID A+ +IEK N+SLKG LP +Y +R +L 
Sbjct  64   YLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-ARPALD  122

Query  136  ASKLAALIDVVN-NIDTIGNPEEDTVGRVYEYFLGKFAATEGKGGGEFYTPKSVVNLIAE  194
              KL+ +ID+   +++   +  +D +GRVYEYF++KFA++EGK +GEFYTP S+V+L+ E
Sbjct  123  KEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVE  182

Query  195  MVEPYQGKIYDPCCGSGGMFVQSIKFIESHHGNTKDVSIYGQEYTSTTYKLAKMNLAIRG  254
            M+EPY+G+IYDPCCGSGGMFVQS +F+E H+G   D++IYGQE  +TT KLAKMNLAIRG
Sbjct  183  MIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRG  242

Query  255  ISSNLGDVAADTFFKDQHEDLKADFIMANPPFNQKDWRASDELVDDPRWAGYPTPPTGNA  314
            I ++LG+  ADTF +D H +LKAD+I+ANPPFN  DW + + L+DD RW  +  PP GNA
Sbjct  243  IDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYRWQ-FGVPPKGNA  300

Query  315  NYAWILHMISKLSEHGTAGFVLANGSMSTTTSGEGEIREQIIKNDLVDCMIALPGQLFYT  374
            NYAWI HMISKL+ +GTAGFVLANGSMST+  +E EIR ++I +DLV+C+++LPGQLFY+
Sbjct  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360

Query  375  TQIPVCLWFISKDKQATSADSKAKGLRNRSGETLFIDARNIGAMIDRTHKEFSTDDIEAI  434
            TQIPVCLWFIS++K         +G ++R  E LFIDAR+IG M+ RT KEFS +DI+ +
Sbjct  361  TQIPVCLWFISNNKG-------QNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKV  413

Query  435  AKTYHAWRgekeaggyeayadeagyCKSASLDDIKANDYVLTPGRYVGAAAIEDDGIPFE  494
            A+TYH+WR    +     Y D AG+CK  +L+++K N+Y+LTPGRYVG A +E+D  PFE
Sbjct  414  AQTYHSWR----GTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFE  469

Query  495  TKMLELSQTLYAQMQESEKLDATIRQNLEVLGYG  528
             KM  ++  L  Q   S  L+  IR++LE LGYG
Sbjct  470  QKMKRITSELSEQFAKSKELEDQIRKSLEGLGYG  503

108) Clocl_1695 in NC_016627


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  487 bits (1836),  Expect = 8e-139, Method: Compositional matrix adjust.
 Identities = 286/514 (56%), Positives = 403/514 (79%), Gaps = 20/514 (3%)

Query  16   IEQVLWAAADKLRKNMDAAEYKHVVLGLIFLKYISDSFYDLYYKLKEGKGEYEGADPDDP  75
            +E+ LW AADKLR +MDAAEYK+V LGLIFLKY+SDSF + Y  LK++   Y + + +D 
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQD--PYADEEDQD-  62

Query  76   YEYRAENVFYVPPQARWDYLQSRAKLPTNGKDIDEAMEAVEKDNPSLKGVLPKEYAKEKL  135
             EY AEN+F VP +ARW+Y++  AK P  G+ ID AM A+EK+N SLKGVLPKEYA+  L
Sbjct  63   -EYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  136  DKQSLGGLIDLIGTIALGDSVSKSSDILGQVYEYFLGQFALAEGKKGGQFYTPRSVVQLL  195
            DK+ LG++IDL+ T+ LGD+ S+  D+LG+VYEYF+++FA AEGK++G+FYTP S+V+LL
Sbjct  122  DKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  196  VEMLEPYEGRVFDPCCGSGGMFVQSEKFVEAHRDHYNGKSREIDKLFERVVSIYGQESNQ  255
            VEM+EPY GR++DPCCGSGGMFVQSE+FVE H+++ ++            ++IYGQESN 
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDD------------IAIYGQESNP  228

Query  256  TTWRLCKMNLAIRGIDSTNVLWNSEGSFLNDAHPDLKADFVIANPPFNDSDWSGELLRND  315
            TTW+L KMNLAIRGID+    +N++ +F ND H +LKAD+++ANPPFN SDW+ E L +D
Sbjct  229  TTWKLAKMNLAIRGIDNDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDD  287

Query  316  GRWKYGVPPVSNANYAWIQHFLYHLSPKGTAGFVMAKGSLSSKTNGEGEIRKNIIEAGLV  375
             RW++GVPP +NANYAWI+H +  L+P+GTAGFV+A+GS+S+  ++E EIRKN+IE +LV
Sbjct  288  YRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLV  347

Query  376  DCIVNLPAKLFLNTQIPACLWFLSREKETNPNHPRRNKILFIDARNMGTLINRRTRELTD  435
            +CIV LP++LF +TQIP CLWF+S +K  N +  R+N ILFIDAR++G +++R  +E++D
Sbjct  348  ECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSD  407

Query  436  EDISKIADTYHNWKKDDGS-YEDIPGFCKSATLDEVRELDYVLTPGRYVGLPD-EEDDFN  493
            EDI K+A+TYH+W+  ++  YEDI+GFCK   L+EV++ +Y+LTPGRYVGL+D EED+  
Sbjct  408  EDIQKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEP  467

Query  494  FEERVQKLTAELKTQMEESTKLDDRIKENLAKVG  527
            FE++++++T+EL  Q   S  L+D+I+ +L  +G
Sbjct  468  FEQKMKRITSELSEQFAKSKELEDQIRKSLEGLG  501

109) Zmob_1779 in NC_017180


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  486 bits (1833),  Expect = 1e-138, Method: Compositional matrix adjust.
 Identities = 295/497 (60%), Positives = 393/497 (80%), Gaps = 3/497 (0%)

Query  29   LGFEQQMFLAADKLRKNLEPSDYKHVALGLIFLRYISTAFEARHValmlddpaaaedpde  88
            +GFE+++  AADKLR ++++++YK+VALGLIFL+Y+S +FE +   L  D  A  ED DE
Sbjct  4    IGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDE  63

Query  89   ylaeNIFWVPETARWSHLRDNARSPSIGKIIDEAMLAIEKANPEQLKGVLPKDYGRPALD  148
            YLAENIFWVP  ARW  + DNA+ P IG++ID AM+AIEK N E LKGVLPK+Y+RPALD
Sbjct  64   YLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKEN-ESLKGVLPKEYARPALD  122

Query  149  SVMLGELIDLISDIGMGDTDDKARDVLGRVYEYFLggfagaegkrggefYTPSSVVRTLV  208
               LG++IDL++ + +GDT+ + +DVLGRVYEYF++ FA+AEGK +GEFYTPSS+V+ LV
Sbjct  123  KEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  209  SMLEPYKGRVYDPCCGSGGMFVQSERFVETHGGKLGDIAIYGQESNHTTWRLARMNLAVR  268
             M+EPYKGR+YDPCCGSGGMFVQSERFVE H G+L+DIAIYGQESN TTW+LA+MNLA+R
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  269  GIGADIRWNNEGSFLRDELKDLRFDYILANPPFNVSDWWNASLEEDPRWQYGKPPAGNAN  328
            GI+ D+   N ++F  D  K+L+ DYILANPPFN SDW +  L +D RWQ+G PP GNAN
Sbjct  242  GIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNAN  301

Query  329  YAWLQHILWHLAPDGTAGVVLANGSMSSNQNSEGEIRRRMVEADVVDCMVALPGQLFYST  388
            YAW++H++  LAP+GTAG VLANGSMS++ + E EIR+ ++E D+V+C+V+LPGQLFYST
Sbjct  302  YAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYST  361

Query  389  QIPACLWFLTRTKKQKGWRDRGGEILFIDARKLGKLVDRTRRELTDEDVARIADTYHAWR  448
            QIP CLWF++  K Q+G ++R  EILFIDAR +G +V RT +E++DED+ ++A+TYH+WR
Sbjct  362  QIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWR  421

Query  449  GEKDAGTYEDISGFCKSATLDEVAHQGFVLTPGRYVGAEEVEEDSVPFTERFAALEKTLK  508
            G +D   YEDI+GFCK   L+EV ++ ++LTPGRYVG  +VEED  PF ++   +   L 
Sbjct  422  GTNDK-YYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELS  480

Query  509  EQFAQGEALNAKIIGSL  525
            EQFA++  L+ +I  SL
Sbjct  481  EQFAKSKELEDQIRKSL  497

110) alr4597 in NC_003272


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  486 bits (1833),  Expect = 1e-138, Method: Compositional matrix adjust.
 Identities = 289/509 (57%), Positives = 402/509 (79%), Gaps = 10/509 (1%)

Query  13   SFEQKLWKAADKLRKNIDAAEYKHIVLGLIFLKYISDAFEELHQKLLAGEGDYAGANPED  72
            +FE+KLW+AADKLR ++DAAEYK++ LGLIFLKY+SD+FEE  + L   ++ YA  + ED
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKEL--KQDPYA--DEED  60

Query  73   RDEYSAENVFFVPVEARWSYLQGQAKQPDIGKTVDLAMEAIEQENAKRLKGILPKVYGQQ  132
            +DEY AEN+F VP EARW Y++++AK+P+IG+ +D AM AIE+EN   LKG+LPK Y++ 
Sbjct  61   QDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENES-LKGVLPKEYARP  119

Query  133  KLDQKSLGGLIDLIGSITLGDAEAQAQDVLGRVYEYFLGQFALAEGKKGGQFYTPESIVK  192
             LD+  LG++IDL+ ++ LGD+E++ QDVLGRVYEYF+++FA AEGK++G+FYTP SIVK
Sbjct  120  ALDKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVK  178

Query  193  LLVEMLEPYNGRVFDPCCGSGGMFVQSEKFVKNHQGRLDDISIYGQESNETTYKLCRMNL  252
            LLVEM+EPY+GR++DPCCGSGGMFVQSE+FV +HQGRLDDI+IYGQESN TT KL +MNL
Sbjct  179  LLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNL  238

Query  253  AIRGIDGSNIKWNPEGSFLNDAHKDLKADFVIANPPFNDSDWGGELLRNDGRWLDKDLVP  312
            AIRGID     +N++ +F ND HK+LKAD+++ANPPFN SDWG E L +D RW  +  VP
Sbjct  239  AIRGIDNDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRW--QFGVP  295

Query  313  PVGNANFAWVSHFIYHLAPTGSAGFVlsngslssntsgEGDIRKALVQKDLVDCIVMLPT  372
            P GNAN+AW+ H I  LAP G+AGFVL+NGS+S++  +E +IRK L+++DLV+CIV LP 
Sbjct  296  PKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPG  355

Query  373  QLFYNTGIPACLWFLSRYKNGNKNRDRHGEVLFIDASELGYMVNRSSRAFTEAEISKIAD  432
            QLFY+T IP CLWF+S  K  N +++R  E+LFIDA E+G MV+R+ + F++ +I K+A+
Sbjct  356  QLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQ  415

Query  433  TYHEWKKSGGS-YRDIKGFCKSASIAEIEKHNFVLTPGRYVGIPDEVEDGVSFEEKMSEL  491
            TYH W+ + +  Y DI GFCK  ++ E+ +++++LTPGRYVG++D  ED  +FE+KM  +
Sbjct  416  TYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRI  475

Query  492  TMALGEQMREGQLLDEEIKKQLLKVGFIV  520
            T  L+EQ   ++ L+++I+K L  +G+ V
Sbjct  476  TSELSEQFAKSKELEDQIRKSLEGLGYGV  504

111) Metho_1314 in NC_019977


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  485 bits (1829),  Expect = 3e-138, Method: Compositional matrix adjust.
 Identities = 269/460 (59%), Positives = 370/460 (81%), Gaps = 7/460 (1%)

Query  4    IEKQLWKTADKLRKNIDAAEYKHIVLGLIFLRYISDAFDELYEKLQQGEGEYAGADPEDR  63
            +E +LW++ADKLR ++DAAEYK++ LGLIFL+Y+SD+F+E Y  L+Q+   YA  D ED+
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDP--YA--DEEDQ  61

Query  64   DEYKAENVFFVPAIARWSYLQAEAKKPEIGKAVDNAMDVIEKENPLLRGVLPKVYARGNL  123
            DEY AEN+F VP  ARW Y++ +AKKPEIG+ +D+AM  IEKEN  L+GVLPK YAR  L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  124  DPANLGGLIDLVSNIALGDAKNRSADVLGHVFEYFLGEFALAEGKKGGQFYTPRSVVELL  183
            D  +LG++IDL + + LGD+ +R  DVLG+V+EYF++ FA AEGK++G+FYTP S+V LL
Sbjct  122  DKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  184  VEMLEPYNGRVFDPCCGSGGMFVQSEKFVADHQGKLNDISIYGQESNQTTWRLAKMNLAI  243
            VEM+EPY+GR++DPCCGSGGMFVQSE+FV  HQG+L+DI+IYGQESN TTW+LAKMNLAI
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240

Query  244  RSIDSSQVKWNNEGSFLNDVHKDLKADYVIANPPFNDSDWSGDLLHKDGRWKYGIPPAGN  303
            R+ID+    +N + +F ND+HK+LKADY++ANPPFN SDW+ + L  D RW++G+PP GN
Sbjct  241  RGIDNDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGN  299

Query  304  ANYAWIQHFLYHLGPSGQAGFVLAKGSLTSKSSGEGDIRKELVETRLVDCIVNLPPKLFL  363
            ANYAWI+H +  L+P+G AGFVLA+GS+++ + +E +IRK+L+E  LV+CIV LP +LF 
Sbjct  300  ANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFY  359

Query  364  NTQIPASLWFLSRNKANGRYRNRTDEILFIDARNMGHLINRRTREFSPEDIQEIASTYHK  423
            +TQIP  LWF+S NK++   ++R +EILFIDAR++GH+++R  +EFS EDIQ +A TYH 
Sbjct  360  STQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHS  419

Query  424  WRNPEGN-YEDVKGFCNSAPIARVRELDYVLTPGRYVGLP  462
            WR  +++ YED+ GFC+   +  V++ +Y+LTPGRYVGL+
Sbjct  420  WRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLA  459

112) Tbis_2509 in NC_014165


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  484 bits (1825),  Expect = 6e-138, Method: Compositional matrix adjust.
 Identities = 286/527 (55%), Positives = 391/527 (75%), Gaps = 32/527 (6%)

Query  17   MPTMADLRDTLWKAADKLRGSMDAAQYKDFVLGLVFLKYVSDAFeerreaireeileQGI  76
            M+T++ + + LW+AADKLRGSMDAA+YK+  LGL+FLKYVSD+FE            +  
Sbjct  1    MATIG-FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFE------------EKY  47

Query  77   PESRLDMFLD--DKDEYIGHGVFWVPEEARWSHLAAHAKSEGIGELIDRAMDAIMKSNQS  134
             E + D + D  D+DEY+++ +FWVP EARW  +  +AK   IG+LID+AM AI K N+S
Sbjct  48   KELKQDPYADEEDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENES  107

Query  135  LAGVLPKIFNRDNVDQRRLGELVDLIGDARFT-GHGDRPARDVLGEVYEYFLEKFARAEG  193
            L GVLPK + R  +D+ +LG+++DL+    F  G+ +   +DVLG VYEYF+ KFA AEG
Sbjct  108  LKGVLPKEYARPALDKEKLGDIIDLFT---FKLGDTESRKQDVLGRVYEYFIAKFASAEG  164

Query  194  KRGGEFYTPASVVKLLVEVLEPYAGRVYDPCCGSGGMFVQAEKFVIAHRGIQHKDDIAVY  253
            K +GEFYTP+S+VKLLVE++EPY GR+YDPCCGSGGMFVQ+E+FV  H+G  + DDIA+Y
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQG--RLDDIAIY  222

Query  254  GQESNERTWRLAKMNLAIHGISGNLGPRWADTFREDKHPDLKADFVLANPPFNMSDWS--  311
            GQESN  TW+LAKMNLAI+GI  +LG R ADTF++D H +LKAD++LANPPFN SDW+  
Sbjct  223  GQESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQE  282

Query  312  RQVDDPRWRFGTPPANNANFAWLQHIISKLAERGTAGVVLANGSMSSKQSGEGEIRAAIV  371
            R +DD RW+FG PP  NAN+AW++H+ISKLA  GTAG VLANGSMS+   +E EIR  ++
Sbjct  283  RLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLI  342

Query  372  EADLVSCMVALPPQLFRTTQIPACLWFFDKDKSPQGAKRLADRRGEVLFIDARNMGTMVD  431
            E DLV C+V+LP QLF +TQIP CLWF+ ++K+ +G K   +R+ E+LFIDAR++G MV 
Sbjct  343  EQDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKK---ERKNEILFIDAREIGHMVS  399

Query  432  RTERVLTADDIARIADTYHAWRGTASARAKNLKYEDVPGFCYSATLEEIRQHDHVLTPGR  491
            RT + ++ +DI ++A+TYH+WRGT         YED++GFC    LEE+++++ +LTPGR
Sbjct  400  RTLKEFSDEDIQKVAQTYHSWRGTNDKY-----YEDIAGFCKVVNLEEVKNNEYILTPGR  454

Query  492  YVGAPEVQNEDDEPIADKIARLTKELYAHFEESARLEKVVREQLEGI  538
            YVG ++V+ ED+EP+ +K+ R+T EL  +F  S  LE  +R  LEG+
Sbjct  455  YVGLADVE-EDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

113) G432_08505 in NC_020561


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  483 bits (1820),  Expect = 1e-137, Method: Compositional matrix adjust.
 Identities = 296/521 (57%), Positives = 410/521 (79%), Gaps = 19/521 (3%)

Query  9    GNLGFEAELFKAADKLRGNMEPSDYKHVALGLIFLKYISDAFearhaellaedaaaaedk  68
            + +GFE  L +AADKLRG+M++++YK+VALGLIFLKY+SD+FE +  EL  +  A  ED+
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  69   deylQDNIFWVPKEARWSHLQANAKQSSIGTLIDDAMRTIEKDNESLKGVLPKDYARPAL  128
            DEYL +NIFWVPKEARW  ++ NAK++ IG LID AM +IEK+NESLKGVLPK+YARPAL
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  129  NKVMLGELIDLISGIALHDGSDKSRDVLGRVYEYFLGQFAGAEGKRGGEFYTPRSVVRTL  188
            +K  LG++IDL++ + L D   + +DVLGRVYEYF+++FA+AEGK +GEFYTP S+V+ L
Sbjct  122  DKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  189  VEMLEPYSGRVYDPCCGSGGMFVQSERFVTEHGGRIGDIAIYGQESNYTTWRLCKMNLAV  248
            VEM+EPY GR+YDPCCGSGGMFVQSERFV  H GR++DIAIYGQESN TTW+L KMNLA+
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240

Query  249  RGIDSKIFWNNEGSFHKDEFATQRGNDGAPMKADFILANPPFNISDWGGERLREDVRWKF  308
            RGID+ +   N ++FH+D    ++G     +KAD+ILANPPFN SDWG ERL +D RW+F
Sbjct  241  RGIDNDLGERNADTFHND---LHKG-----LKADYILANPPFNASDWGQERLLDDYRWQF  292

Query  309  GVPPVGNANYAWLQHIFHHLAPHGVAGVVLANgsmssqqsgegeIRKAMLEAADGAGVVD  368
            GVPP GNANYAW++H++  LAP+G AG VLANGSMS+   +E EIRK ++E     ++V+
Sbjct  293  GVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE----QDLVE  348

Query  369  CMVAMPGQLFYSTQIPACLWILAKGRSNGLVKKTKLRDRRGEVLFIDARKMGVLVDRTRR  428
            C+V++PGQLFYSTQIP CLW++++ +++        ++R+ E+LFIDAR +G +V RT +
Sbjct  349  CIVTLPGQLFYSTQIPVCLWFISNNKGQ-----NGKKERKNEILFIDAREIGHMVSRTLK  403

Query  429  ELTNSEIRKIADTYHAWRGEAEAGEYSDIPGFCKSATLDEIRKHGHVLTPGRYIGVeaqd  488
            E+++ +I+K+A+TYH+WRG  +   Y DI+GFCK   L+E++++  +LTPGRY+G+   +
Sbjct  404  EFSDEDIQKVAQTYHSWRGTNDK-YYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVE  462

Query  489  eddeafedKMQRLTAQLGEQTKRGAELDAVIREKLGVIGYG  529
            ED+E+FE+KM+R+T++L+EQ  ++ EL+  IR  L  +GYG
Sbjct  463  EDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYG  503

114) HMPREF0868_0489 in NC_013895


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  483 bits (1820),  Expect = 1e-137, Method: Compositional matrix adjust.
 Identities = 281/505 (56%), Positives = 382/505 (76%), Gaps = 12/505 (2%)

Query  7    ATLGFEKQIWDAACVLWGHIPASEYRNVIIGLIFLKYISTAFDKKYQQLIAEGDGFENDP  66
            AT+GFE ++W+AA  L+G + A+EY+NV +GLIFLKY+S +F+ KY++L  +  + E+D 
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  67   DAYLEDNVFFVPEDARWEKIAKAAHEPEIGKVIDEAMRAIEADNKKLKNVLPKNYASPDL  126
            D YL +N+F VP +ARW+ I   A  PEIG++ID AM AIE +N  LK VLPK+YA P L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  127  DKKILGNVVDLFTNMDMSDTEGNR-DVLGRTYEYCIAQFAekegkgggeFYTPSSIVNTL  185
            DK  LG+++DLFT   ++DTE+ + DVLGR YEY IA+FA  EGK +GEFYTPSSIV+ L
Sbjct  122  DKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  186  VAILKPYANCRVYDCCCGSGGMFVQSAKFIQAHSGNRGSISIYGQEANPDTWKMAIMNLT  245
            V ++ PY   R+YD CCGSGGMFVQS +F++ H G  + I+IYGQE+NP TWK+A MNL+
Sbjct  181  VEMIEPYKG-RIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLA  239

Query  246  IRGLDADLGAYHADTFTNDLHPTLKADFILANPPFNYNPWGQEDLKDDVRWKYGVPPASN  305
            IRG+D DLG  +ADTF NDLH  LKAD+ILANPPFN + WGQE L DD RW++GVPP +N
Sbjct  240  IRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGN  299

Query  306  ANYAWIQHMIHHLAPSGKIGLVLANGALSSQNGGEGEIRKKIIEDDLIEGIIAMPPQLFY  365
            ANYAWI+HMI  LAP+G  G+VLANG++S+   +E EIRK++IE+DL+E I+++P QLFY
Sbjct  300  ANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFY  359

Query  366  SVTIPATLWFITKGKKQKGKT------VFIDARKMGHMVDRKHRDFTEEDIQKLADTIEA  419
            S  IP  LWFI++ K Q+GK       +FIDAR +GHMV R  ++F++EDIQK+A+T ++
Sbjct  360  STQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHS  419

Query  420  FQNGT---LEDEKGFCSVATIQDIAKQDYVLTPGRYVGIEEQEDDGEPFDEKMTRLTSEL  476
             +       ED  GFC V  ++++ +++Y+LTPGRYVG+ + E+D EPF++KM R+TSEL
Sbjct  420  WRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSEL  479

Query  477  SDMFERSHELEDEIRKKLGAIGYEI  501
            S+ F +S ELED+IRK L ++GY +
Sbjct  480  SEQFAKSKELEDQIRKSLEGLGYGV  504

115) NIS_1707 in NC_009662


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  482 bits (1819),  Expect = 2e-137, Method: Compositional matrix adjust.
 Identities = 272/461 (60%), Positives = 372/461 (81%), Gaps = 12/461 (2%)

Query  10   SFEQSLWKAADKLRKNIDAAEYKHVVLGLIFLRYISEAFEDLYEKLKRGEGEYAGADPED  69
            +FE+ LW+AADKLR ++DAAEYK+V LGLIFL+Y+S++FE+ Y  LK  ++ YA  D ED
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELK--QDPYA--DEED  60

Query  70   IDEYRAENVFFIPPEARWSHLKEKAKDPEIGKIIDNAMELIEKKNPSLKGVLPKVYARGN  129
             DEY AEN+F +P EARW  ++++AK PEIG++ID+AM  IEK N SLKGVLPK YAR  
Sbjct  61   QDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPA  120

Query  130  IDPIALGGLIDLFSNIAINEAKEKTSDILGHVFEYFLGEFALAEGKKGGQFYTPRSVVEL  189
            +D   LG++IDLF+ + + ++  +  D+LG+V+EYF++ FA AEGK++G+FYTP S+V L
Sbjct  121  LDKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKL  179

Query  190  LVEMLEPYRGRVFDPCCGSGGMFVQSEKFVQEHQGKINDISIYGQESNQTTWRLCKMNLA  249
            LVEM+EPY+GR++DPCCGSGGMFVQSE+FV+ HQG+++DI+IYGQESN TTW+L KMNLA
Sbjct  180  LVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLA  239

Query  250  IRGIDSSQVRWNPEGSFLNDAHKDLKSDFVIANPPFNDSDWSGELLREDARWKYGVPPAG  309
            IRGID+    +N++ +F ND HK+LK+D+++ANPPFN SDW+ E L +D RW++GVPP G
Sbjct  240  IRGIDNDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKG  298

Query  310  NANYAWIQHFIFHLAPHGKAGFVLAKGALTTKQKDEYEIRKNMIEDDIVDCIVNLPAKLF  369
            NANYAWI+H I  LAP+G AGFVLA+G+++T  KDE EIRKN+IE+D+V+CIV LP++LF
Sbjct  299  NANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLF  358

Query  370  LNTQIPASLWFLRKNKT-----TRKGQILFIDARDMGKLINRRQRILTPEDIKKIADTYH  424
             +TQIP  LWF+ +NK       RK +ILFIDAR++G +++R  + ++ EDI+K+A+TYH
Sbjct  359  YSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYH  418

Query  425  TWQ-KEDSSYEDIKGFCKSVSVDEVKGLDYVLTPGRYVGLA  464
            +W+  +D  YEDI GFCK V+++EVK  +Y+LTPGRYVGLA
Sbjct  419  SWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLA  459

116) Anacy_6051 in NC_019773


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  482 bits (1818),  Expect = 2e-137, Method: Compositional matrix adjust.
 Identities = 281/509 (56%), Positives = 394/509 (78%), Gaps = 10/509 (1%)

Query  62   SFEQKLWKTADKLRKNIDAAEYKHIVLGLIFLKYISDAFEELHQKLLAGEGEYEGANPED  121
            +FE+KLW++ADKLR ++DAAEYK++ LGLIFLKY+SD+FEE  + L   ++ Y  A+ ED
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKEL--KQDPY--ADEED  60

Query  122  SEEYAAENVFFVPVAARWPSLQAQAKQPTIGKLVDEAMEAIEQENLKRLKGILPKVYGQQ  181
             +EY AEN+F VP  ARW  ++ +AK+P IG+L+D AM AIE+EN   LKG+LPK Y++ 
Sbjct  61   QDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKEN-ESLKGVLPKEYARP  119

Query  182  KLDQKSLGGLIDLIGSITLGDAEAQAQDVLGRVYEYFLGQFALAEGKKGGQFYTPESIVR  241
             LD+  LG++IDL+ ++ LGD+E++ QDVLGRVYEYF+++FA AEGK++G+FYTP SIV+
Sbjct  120  ALDKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVK  178

Query  242  LLVEILEPYNGRVFDPCCGSGGMFVQSEKFIKNHQGRLDDISIYGQESNETTYKLCRMNL  301
            LLVE++EPY+GR++DPCCGSGGMFVQSE+F+ +HQGRLDDI+IYGQESN TT KL +MNL
Sbjct  179  LLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNL  238

Query  302  AIRGIDGSNIKWNPEGSFLNDAHKDLKADFVIANPPFNDSDWGGELLRNDGRWLDKDLVP  361
            AIRGID     +N++ +F ND HK+LKAD+++ANPPFN SDWG E L +D RW  +  VP
Sbjct  239  AIRGIDNDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRW--QFGVP  295

Query  362  PVGNANFAWVSHFIYHLAPTGSAGFVlsngslssntsgEGDIRKALVQKDLVDCIVMLPT  421
            P GNAN+AW+ H I  LAP G+AGFVL+NGS+S++  +E +IRK L+++DLV+CIV LP 
Sbjct  296  PKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPG  355

Query  422  QLFYNTGIPACLWFLSRYKNGNKHRARHGEVLFIDASELGYMVNRSSRAFTEAEISKIAD  481
            QLFY+T IP CLWF+S  K  N  + R  E+LFIDA E+G MV+R+ + F++ +I K+A+
Sbjct  356  QLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQ  415

Query  482  TYHEWKKSGGS-YRDIKGFCKSANLAAIEKHNFVLTPGRYVGIPDEVEDGVSFEEKMGAL  540
            TYH W+ + +  Y DI GFCK  NL  + +++++LTPGRYVG++D  ED  +FE+KM  +
Sbjct  416  TYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRI  475

Query  541  TADLAAQMNEGLALDAEIKIQLAKVGFSL  569
            T++L+ Q   +  L+ +I+  L  +G+++
Sbjct  476  TSELSEQFAKSKELEDQIRKSLEGLGYGV  504

117) Calni_0575 in NC_014758


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  482 bits (1817),  Expect = 2e-137, Method: Compositional matrix adjust.
 Identities = 280/500 (56%), Positives = 391/500 (79%), Gaps = 13/500 (2%)

Query  10   SFEQSLWKAADKLRKNIDAAEYKHVVLGLIFLRYISDAFEDLYEKLKKGEGEYSGADPED  69
            +FE+ LW+AADKLR ++DAAEYK+V LGLIFL+Y+SD+FE+ Y  LK  ++ Y  AD ED
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELK--QDPY--ADEED  60

Query  70   VDEYKAENVFFIPPEARWSYLKAHAKSPEIGKIIDRAMDLIEKENPSLKGVLPKVYARGN  129
             DEY AEN+F +P EARW Y++ +AK PEIG++ID+AM  IEKEN SLKGVLPK YAR  
Sbjct  61   QDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPA  120

Query  130  IDPISIGGLIDLFNNMAINEAKEKTSDILGHVFEYFLGQFALAEGKKGGQFYTPRSVVEL  189
            +D   +G++IDLF    + ++  +  D+LG+V+EYF+++FA AEGK++G+FYTP S+V L
Sbjct  121  LDKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKL  179

Query  190  LVEMLEPYKGRVFDPCCGSGGMFVQSEKSVQEHQGKINDISIYGQESNQTTWRLCKMNLA  249
            LVEM+EPYKGR++DPCCGSGGMFVQSE+ V+ HQG+++DI+IYGQESN TTW+L KMNLA
Sbjct  180  LVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLA  239

Query  250  IRGIDSSQVKWNPEGSFLNDAHKDLKADFVIANPPFNDSDWSGELLRKDVRWKYGVPPEG  309
            IRGID+    +N++ +F ND HK+LKAD+++ANPPFN SDW+ E L  D RW++GVPP G
Sbjct  240  IRGIDNDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKG  298

Query  310  NANYAWIQHFIFHLSPSGKAGFVLAKGSLTTKQNAEYEIRKNMIQDDIIDCIVNLPPKLF  369
            NANYAWI+H I  L+P+G AGFVLA+GS++T  + E EIRKN+I++D+++CIV LP +LF
Sbjct  299  NANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLF  358

Query  370  LNTQIPACLWFIRKNKT-----TKKGQILFIDARDMGQLINRRQRVLTEDDIRKIADTYH  424
             +TQIP CLWFI +NK       +K +ILFIDAR++G++++R  + ++++DI+K+A+TYH
Sbjct  359  YSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYH  418

Query  425  KWQKEDGS-YEDIKGFCKSATIEEVANLDYVLTPGRYVGLPdeeedfdf-eerfNKLKAE  482
             W+  ++  YEDI GFCK   +EEV N +Y+LTPGRYVGL+D EED +  E++ +++ +E
Sbjct  419  SWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSE  478

Query  483  FLQQLKEEERLNRLIMENLE  502
            + +Q+     L+  I  +LE
Sbjct  479  LSEQFAKSKELEDQIRKSLE  498

118) SeD_A4931 in NC_011205


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  482 bits (1819),  Expect = 2e-137, Method: Compositional matrix adjust.
 Identities = 273/532 (52%), Positives = 392/532 (74%), Gaps = 38/532 (7%)

Query  14   GFEDTLWDTANQLRGSVESSEYKHVVLSLVFLKFISDKFEARRKQM------EDEGQGDF  67
            GFE+ LW++A++LRGS++++EYK+V L+L+FLK++SD FE + K++      ++E+Q+++
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDEY  64

Query  68   LEMEVFYQQDNIFYLPEEARWSFIKQNAKQDDIAVRIDTALSTIEKRNPSLKGALPDNYF  127
            L        +NIF +P EARW +I++NAK+ +I+  ID A+ +IEK N SLKG LP +Y 
Sbjct  65   LA-------ENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-  116

Query  128  SRQNLETKKLASLIDTIDNIETLAHETDVEALSKEDLVGRVYEYFLGKFAATEGKGGGEF  187
            +R  L+  KL+ +ID       ++   +     K+D++GRVYEYF++KFA++EGK +GEF
Sbjct  117  ARPALDKEKLGDIIDL------FTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEF  170

Query  188  YTPKCVVTLLTEMLEPFQGKIYDPCCGSAGMFVQSVKFVESHQGKSRDIALYGQELTATT  247
            YTP  +V LL EM+EP++G+IYDPCCGS+GMFVQS +FVE HQG+  DIA+YGQE  +TT
Sbjct  171  YTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTT  230

Query  248  YKLAKMNLAIRGLSANLGERPADTFFSDQHPDLKADYILANPPFNLKDWRNDAELTKDPR  307
             KLAKMNLAIRG+  +LGER ADTF +D H +LKADYILANPPFN  DW  +  L  D R
Sbjct  231  WKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYR  289

Query  308  FAGYRTPPTGNANYGWILHMLSKLSANGTAGFVLANGSMSSNTSGEAEIRAQMIENDLID  367
               +  PP GNANY+WI HM+SKL++NGTAGFVLANGSMS++  +E EIR ++IE+DL++
Sbjct  290  WQ-FGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVE  348

Query  368  CMIALPGQLFFTTQIPVCLWFMTKSKAADPAKGYRNRQGETLFIDARNLGTMINRTTKEL  427
            C+++LPGQLF++TQIPVCLWF++++K+ +  K   +R+ E LFIDAR++G M++RT KE+
Sbjct  349  CIVTLPGQLFYSTQIPVCLWFISNNKGQNGKK---ERKNEILFIDAREIGHMVSRTLKEF  405

Query  428  TADDIATIADTYHAWRSTPEELVERVKRGDSQLAQYEDQAGFCKVATIAEIKANDSVLTP  487
            + +DI  +A+TYH+WR+T +               YED AGFCKV  + E+K N+ +LTP
Sbjct  406  SDEDIQKVAQTYHSWRGTNDKY-------------YEDIAGFCKVVNLEEVKNNEYILTP  452

Query  488  GRYVGAAEQEDDGVAFETKMRELSQTLFAQMKQAEELDNAIRQNLEVLGYGI  539
            GRYVG A+ E+D  +FE KM+ ++  L  Q  ++ EL++ IR++LE LGYG+
Sbjct  453  GRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

119) hsdM in NC_011294


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  482 bits (1819),  Expect = 2e-137, Method: Compositional matrix adjust.
 Identities = 273/532 (52%), Positives = 392/532 (74%), Gaps = 38/532 (7%)

Query  14   GFEDTLWDTANQLRGSVESSEYKHVVLSLVFLKFISDKFEARRKQM------EDEGQGDF  67
            GFE+ LW++A++LRGS++++EYK+V L+L+FLK++SD FE + K++      ++E+Q+++
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDEY  64

Query  68   LEMEVFYQQDNIFYLPEEARWSFIKQNAKQDDIAVRIDTALSTIEKRNPSLKGALPDNYF  127
            L        +NIF +P EARW +I++NAK+ +I+  ID A+ +IEK N SLKG LP +Y 
Sbjct  65   LA-------ENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-  116

Query  128  SRQNLETKKLASLIDTIDNIETLAHETDVEALSKEDLVGRVYEYFLGKFAATEGKGGGEF  187
            +R  L+  KL+ +ID       ++   +     K+D++GRVYEYF++KFA++EGK +GEF
Sbjct  117  ARPALDKEKLGDIIDL------FTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEF  170

Query  188  YTPKCVVTLLTEMLEPFQGKIYDPCCGSAGMFVQSVKFVESHQGKSRDIALYGQELTATT  247
            YTP  +V LL EM+EP++G+IYDPCCGS+GMFVQS +FVE HQG+  DIA+YGQE  +TT
Sbjct  171  YTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTT  230

Query  248  YKLAKMNLAIRGLSANLGERPADTFFSDQHPDLKADYILANPPFNLKDWRNDAELTKDPR  307
             KLAKMNLAIRG+  +LGER ADTF +D H +LKADYILANPPFN  DW  +  L  D R
Sbjct  231  WKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYR  289

Query  308  FAGYRTPPTGNANYGWILHMLSKLSANGTAGFVLANGSMSSNTSGEAEIRAQMIENDLID  367
               +  PP GNANY+WI HM+SKL++NGTAGFVLANGSMS++  +E EIR ++IE+DL++
Sbjct  290  WQ-FGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVE  348

Query  368  CMIALPGQLFFTTQIPVCLWFMTKSKAADPAKGYRNRQGETLFIDARNLGTMINRTTKEL  427
            C+++LPGQLF++TQIPVCLWF++++K+ +  K   +R+ E LFIDAR++G M++RT KE+
Sbjct  349  CIVTLPGQLFYSTQIPVCLWFISNNKGQNGKK---ERKNEILFIDAREIGHMVSRTLKEF  405

Query  428  TADDIATIADTYHAWRSTPEELVERVKRGDSQLAQYEDQAGFCKVATIAEIKANDSVLTP  487
            + +DI  +A+TYH+WR+T +               YED AGFCKV  + E+K N+ +LTP
Sbjct  406  SDEDIQKVAQTYHSWRGTNDKY-------------YEDIAGFCKVVNLEEVKNNEYILTP  452

Query  488  GRYVGAAEQEDDGVAFETKMRELSQTLFAQMKQAEELDNAIRQNLEVLGYGI  539
            GRYVG A+ E+D  +FE KM+ ++  L  Q  ++ EL++ IR++LE LGYG+
Sbjct  453  GRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

120) hsdM in NC_011274


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  482 bits (1819),  Expect = 2e-137, Method: Compositional matrix adjust.
 Identities = 273/532 (52%), Positives = 392/532 (74%), Gaps = 38/532 (7%)

Query  14   GFEDTLWDTANQLRGSVESSEYKHVVLSLVFLKFISDKFEARRKQM------EDEGQGDF  67
            GFE+ LW++A++LRGS++++EYK+V L+L+FLK++SD FE + K++      ++E+Q+++
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDEY  64

Query  68   LEMEVFYQQDNIFYLPEEARWSFIKQNAKQDDIAVRIDTALSTIEKRNPSLKGALPDNYF  127
            L        +NIF +P EARW +I++NAK+ +I+  ID A+ +IEK N SLKG LP +Y 
Sbjct  65   LA-------ENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-  116

Query  128  SRQNLETKKLASLIDTIDNIETLAHETDVEALSKEDLVGRVYEYFLGKFAATEGKGGGEF  187
            +R  L+  KL+ +ID       ++   +     K+D++GRVYEYF++KFA++EGK +GEF
Sbjct  117  ARPALDKEKLGDIIDL------FTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEF  170

Query  188  YTPKCVVTLLTEMLEPFQGKIYDPCCGSAGMFVQSVKFVESHQGKSRDIALYGQELTATT  247
            YTP  +V LL EM+EP++G+IYDPCCGS+GMFVQS +FVE HQG+  DIA+YGQE  +TT
Sbjct  171  YTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTT  230

Query  248  YKLAKMNLAIRGLSANLGERPADTFFSDQHPDLKADYILANPPFNLKDWRNDAELTKDPR  307
             KLAKMNLAIRG+  +LGER ADTF +D H +LKADYILANPPFN  DW  +  L  D R
Sbjct  231  WKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYR  289

Query  308  FAGYRTPPTGNANYGWILHMLSKLSANGTAGFVLANGSMSSNTSGEAEIRAQMIENDLID  367
               +  PP GNANY+WI HM+SKL++NGTAGFVLANGSMS++  +E EIR ++IE+DL++
Sbjct  290  WQ-FGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVE  348

Query  368  CMIALPGQLFFTTQIPVCLWFMTKSKAADPAKGYRNRQGETLFIDARNLGTMINRTTKEL  427
            C+++LPGQLF++TQIPVCLWF++++K+ +  K   +R+ E LFIDAR++G M++RT KE+
Sbjct  349  CIVTLPGQLFYSTQIPVCLWFISNNKGQNGKK---ERKNEILFIDAREIGHMVSRTLKEF  405

Query  428  TADDIATIADTYHAWRSTPEELVERVKRGDSQLAQYEDQAGFCKVATIAEIKANDSVLTP  487
            + +DI  +A+TYH+WR+T +               YED AGFCKV  + E+K N+ +LTP
Sbjct  406  SDEDIQKVAQTYHSWRGTNDKY-------------YEDIAGFCKVVNLEEVKNNEYILTP  452

Query  488  GRYVGAAEQEDDGVAFETKMRELSQTLFAQMKQAEELDNAIRQNLEVLGYGI  539
            GRYVG A+ E+D  +FE KM+ ++  L  Q  ++ EL++ IR++LE LGYG+
Sbjct  453  GRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

121) hsdM in NC_022221


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  482 bits (1819),  Expect = 2e-137, Method: Compositional matrix adjust.
 Identities = 273/532 (52%), Positives = 392/532 (74%), Gaps = 38/532 (7%)

Query  14   GFEDTLWDTANQLRGSVESSEYKHVVLSLVFLKFISDKFEARRKQM------EDEGQGDF  67
            GFE+ LW++A++LRGS++++EYK+V L+L+FLK++SD FE + K++      ++E+Q+++
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDEY  64

Query  68   LEMEVFYQQDNIFYLPEEARWSFIKQNAKQDDIAVRIDTALSTIEKRNPSLKGALPDNYF  127
            L        +NIF +P EARW +I++NAK+ +I+  ID A+ +IEK N SLKG LP +Y 
Sbjct  65   LA-------ENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-  116

Query  128  SRQNLETKKLASLIDTIDNIETLAHETDVEALSKEDLVGRVYEYFLGKFAATEGKGGGEF  187
            +R  L+  KL+ +ID       ++   +     K+D++GRVYEYF++KFA++EGK +GEF
Sbjct  117  ARPALDKEKLGDIIDL------FTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEF  170

Query  188  YTPKCVVTLLTEMLEPFQGKIYDPCCGSAGMFVQSVKFVESHQGKSRDIALYGQELTATT  247
            YTP  +V LL EM+EP++G+IYDPCCGS+GMFVQS +FVE HQG+  DIA+YGQE  +TT
Sbjct  171  YTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTT  230

Query  248  YKLAKMNLAIRGLSANLGERPADTFFSDQHPDLKADYILANPPFNLKDWRNDAELTKDPR  307
             KLAKMNLAIRG+  +LGER ADTF +D H +LKADYILANPPFN  DW  +  L  D R
Sbjct  231  WKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYR  289

Query  308  FAGYRTPPTGNANYGWILHMLSKLSANGTAGFVLANGSMSSNTSGEAEIRAQMIENDLID  367
               +  PP GNANY+WI HM+SKL++NGTAGFVLANGSMS++  +E EIR ++IE+DL++
Sbjct  290  WQ-FGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVE  348

Query  368  CMIALPGQLFFTTQIPVCLWFMTKSKAADPAKGYRNRQGETLFIDARNLGTMINRTTKEL  427
            C+++LPGQLF++TQIPVCLWF++++K+ +  K   +R+ E LFIDAR++G M++RT KE+
Sbjct  349  CIVTLPGQLFYSTQIPVCLWFISNNKGQNGKK---ERKNEILFIDAREIGHMVSRTLKEF  405

Query  428  TADDIATIADTYHAWRSTPEELVERVKRGDSQLAQYEDQAGFCKVATIAEIKANDSVLTP  487
            + +DI  +A+TYH+WR+T +               YED AGFCKV  + E+K N+ +LTP
Sbjct  406  SDEDIQKVAQTYHSWRGTNDKY-------------YEDIAGFCKVVNLEEVKNNEYILTP  452

Query  488  GRYVGAAEQEDDGVAFETKMRELSQTLFAQMKQAEELDNAIRQNLEVLGYGI  539
            GRYVG A+ E+D  +FE KM+ ++  L  Q  ++ EL++ IR++LE LGYG+
Sbjct  453  GRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

122) hsdM in NC_016831


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  482 bits (1819),  Expect = 2e-137, Method: Compositional matrix adjust.
 Identities = 273/532 (52%), Positives = 392/532 (74%), Gaps = 38/532 (7%)

Query  14   GFEDTLWDTANQLRGSVESSEYKHVVLSLVFLKFISDKFEARRKQM------EDEGQGDF  67
            GFE+ LW++A++LRGS++++EYK+V L+L+FLK++SD FE + K++      ++E+Q+++
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDEY  64

Query  68   LEMEVFYQQDNIFYLPEEARWSFIKQNAKQDDIAVRIDTALSTIEKRNPSLKGALPDNYF  127
            L        +NIF +P EARW +I++NAK+ +I+  ID A+ +IEK N SLKG LP +Y 
Sbjct  65   LA-------ENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-  116

Query  128  SRQNLETKKLASLIDTIDNIETLAHETDVEALSKEDLVGRVYEYFLGKFAATEGKGGGEF  187
            +R  L+  KL+ +ID       ++   +     K+D++GRVYEYF++KFA++EGK +GEF
Sbjct  117  ARPALDKEKLGDIIDL------FTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEF  170

Query  188  YTPKCVVTLLTEMLEPFQGKIYDPCCGSAGMFVQSVKFVESHQGKSRDIALYGQELTATT  247
            YTP  +V LL EM+EP++G+IYDPCCGS+GMFVQS +FVE HQG+  DIA+YGQE  +TT
Sbjct  171  YTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTT  230

Query  248  YKLAKMNLAIRGLSANLGERPADTFFSDQHPDLKADYILANPPFNLKDWRNDAELTKDPR  307
             KLAKMNLAIRG+  +LGER ADTF +D H +LKADYILANPPFN  DW  +  L  D R
Sbjct  231  WKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYR  289

Query  308  FAGYRTPPTGNANYGWILHMLSKLSANGTAGFVLANGSMSSNTSGEAEIRAQMIENDLID  367
               +  PP GNANY+WI HM+SKL++NGTAGFVLANGSMS++  +E EIR ++IE+DL++
Sbjct  290  WQ-FGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVE  348

Query  368  CMIALPGQLFFTTQIPVCLWFMTKSKAADPAKGYRNRQGETLFIDARNLGTMINRTTKEL  427
            C+++LPGQLF++TQIPVCLWF++++K+ +  K   +R+ E LFIDAR++G M++RT KE+
Sbjct  349  CIVTLPGQLFYSTQIPVCLWFISNNKGQNGKK---ERKNEILFIDAREIGHMVSRTLKEF  405

Query  428  TADDIATIADTYHAWRSTPEELVERVKRGDSQLAQYEDQAGFCKVATIAEIKANDSVLTP  487
            + +DI  +A+TYH+WR+T +               YED AGFCKV  + E+K N+ +LTP
Sbjct  406  SDEDIQKVAQTYHSWRGTNDKY-------------YEDIAGFCKVVNLEEVKNNEYILTP  452

Query  488  GRYVGAAEQEDDGVAFETKMRELSQTLFAQMKQAEELDNAIRQNLEVLGYGI  539
            GRYVG A+ E+D  +FE KM+ ++  L  Q  ++ EL++ IR++LE LGYG+
Sbjct  453  GRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

123) I137_21565 in NC_021984


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  482 bits (1819),  Expect = 2e-137, Method: Compositional matrix adjust.
 Identities = 273/532 (52%), Positives = 392/532 (74%), Gaps = 38/532 (7%)

Query  14   GFEDTLWDTANQLRGSVESSEYKHVVLSLVFLKFISDKFEARRKQM------EDEGQGDF  67
            GFE+ LW++A++LRGS++++EYK+V L+L+FLK++SD FE + K++      ++E+Q+++
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDEY  64

Query  68   LEMEVFYQQDNIFYLPEEARWSFIKQNAKQDDIAVRIDTALSTIEKRNPSLKGALPDNYF  127
            L        +NIF +P EARW +I++NAK+ +I+  ID A+ +IEK N SLKG LP +Y 
Sbjct  65   LA-------ENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-  116

Query  128  SRQNLETKKLASLIDTIDNIETLAHETDVEALSKEDLVGRVYEYFLGKFAATEGKGGGEF  187
            +R  L+  KL+ +ID       ++   +     K+D++GRVYEYF++KFA++EGK +GEF
Sbjct  117  ARPALDKEKLGDIIDL------FTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEF  170

Query  188  YTPKCVVTLLTEMLEPFQGKIYDPCCGSAGMFVQSVKFVESHQGKSRDIALYGQELTATT  247
            YTP  +V LL EM+EP++G+IYDPCCGS+GMFVQS +FVE HQG+  DIA+YGQE  +TT
Sbjct  171  YTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTT  230

Query  248  YKLAKMNLAIRGLSANLGERPADTFFSDQHPDLKADYILANPPFNLKDWRNDAELTKDPR  307
             KLAKMNLAIRG+  +LGER ADTF +D H +LKADYILANPPFN  DW  +  L  D R
Sbjct  231  WKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYR  289

Query  308  FAGYRTPPTGNANYGWILHMLSKLSANGTAGFVLANGSMSSNTSGEAEIRAQMIENDLID  367
               +  PP GNANY+WI HM+SKL++NGTAGFVLANGSMS++  +E EIR ++IE+DL++
Sbjct  290  WQ-FGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVE  348

Query  368  CMIALPGQLFFTTQIPVCLWFMTKSKAADPAKGYRNRQGETLFIDARNLGTMINRTTKEL  427
            C+++LPGQLF++TQIPVCLWF++++K+ +  K   +R+ E LFIDAR++G M++RT KE+
Sbjct  349  CIVTLPGQLFYSTQIPVCLWFISNNKGQNGKK---ERKNEILFIDAREIGHMVSRTLKEF  405

Query  428  TADDIATIADTYHAWRSTPEELVERVKRGDSQLAQYEDQAGFCKVATIAEIKANDSVLTP  487
            + +DI  +A+TYH+WR+T +               YED AGFCKV  + E+K N+ +LTP
Sbjct  406  SDEDIQKVAQTYHSWRGTNDKY-------------YEDIAGFCKVVNLEEVKNNEYILTP  452

Query  488  GRYVGAAEQEDDGVAFETKMRELSQTLFAQMKQAEELDNAIRQNLEVLGYGI  539
            GRYVG A+ E+D  +FE KM+ ++  L  Q  ++ EL++ IR++LE LGYG+
Sbjct  453  GRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

124) TEQUI_0820 in NC_014914


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  481 bits (1814),  Expect = 4e-137, Method: Compositional matrix adjust.
 Identities = 279/506 (56%), Positives = 393/506 (78%), Gaps = 11/506 (2%)

Query  1    MATLGFEKQLWEAACKLWGSIPAADYRKVIIGLIFLKYVSTTFDKRFQQLLDEGEGFEND  60
            MAT+GFE +LW+AA KL+GS+ AA+Y++V +GLIFLKYVS +F+ ++++L ++  + E+D
Sbjct  1    MATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEED  60

Query  61   IDAYTSKNLFYIPEEARWNHISKASHTEKIGVVIDNAMRQIETQNKSLNGVLPKIYASPD  120
             D Y + N+F +P EARW+ I+  +    IG +ID+AM  IE +N SL+GVLPK YA P 
Sbjct  61   QDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPA  120

Query  121  IDKHVLSDVVDLFTNSINFESIEQNKDILGRTYEYCIANFASYEGRRGGEFYTPASIVKT  180
            +DK+ L+D++DLFT  +  ++  +++D+LGR YEY IA+FAS EG+ +GEFYTP+SIVK 
Sbjct  121  LDKEKLGDIIDLFTFKLG-DTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKL  179

Query  181  MVEILKPQSGMRIYDPCMGSGGMIVQSAKYIEQHAGKRFSISVYGQESNPDTWKMAKMNM  240
            +VE++ P  G RIYDPC GSGGM+VQS +++E+H G+   I++YGQESNP TWK+AKMN+
Sbjct  180  LVEMIEPYKG-RIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNL  238

Query  241  AIRGIDANLGQHHADTFKNDLHPQKKFDIIMANPPFNLSEWGQENLVEDIRWKYGVPPKS  300
            AIRGID +LG+++ADTF NDLH   K D I+ANPPFN S+WGQE L++D RW++GVPPK+
Sbjct  239  AIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKG  298

Query  301  NANYAWIQHMIHHLATNGKIGLVLANGALSSQSSGEGEIRRKIIEDDLIEGIVALPTQLF  360
            NANYAWI+HMI  LA NG  G+VLANG++S+ + +E EIR+++IE+DL+E IV+LP QLF
Sbjct  299  NANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLF  358

Query  361  YSVTIPVTLWFITKNKKQKGKT------LFIDARNIGYMVDRTHRDFTDEDIDLLAKTFE  414
            YS  IPV LWFI++NK Q+GK       LFIDAR+IG MV RT ++F+DEDI+ +A+T++
Sbjct  359  YSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYH  418

Query  415  DFQNGK---LEEKQGFSAIANLEDIAKQDFILTPGRYVGIEELEDDGVPFEEKMTRLTSE  471
              +  +    E+  GF  + NLE++ ++++ILTPGRYVG+ ++E+D  PFE+KM R+TSE
Sbjct  419  SWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSE  478

Query  472  LSEMFEKSHELEEEIRKKLGAIGYEV  497
            LSE F KS ELE++IRK L ++GY V
Sbjct  479  LSEQFAKSKELEDQIRKSLEGLGYGV  504

125) TREAZ_2435 in NC_015577


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  481 bits (1814),  Expect = 4e-137, Method: Compositional matrix adjust.
 Identities = 278/498 (56%), Positives = 379/498 (77%), Gaps = 11/498 (2%)

Query  18   IEKQLWKAADKLRKNIDAAEYKHIVLGLIFLKYISDAFEELHEKLTSGKGEYKGADPEDR  77
            +E +LW+AADKLR ++DAAEYK++ LGLIFLKY+SD+FEE    L   ++ Y  AD ED+
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELK--QDPY--ADEEDQ  61

Query  78   DEYLAENIFFVPENARWTRIRSRAKQVSIGKDIDAAMDAIEKDNPSLKDVLPKVYARGNL  137
            DEYLAENIF VP +ARW  I   AK+  IG+ ID AM AIEK+N SLK+VLPK YAR  L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  138  DPVNLGALVDLVSNTALGTAEARSADLLGHVFEYFLGEFALAEGKKGGQFYTPRSVVELL  197
            D  +LG ++DL +   LG +E+R  D+LG+V+EYF++ FA AEGK++G+FYTP S+V LL
Sbjct  122  DKEKLGDIIDLFTFK-LGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  198  VSMLEPYKGRVFDPCCGSGGMFVQSEKFVANHRGRLKDISIYGQESNHTTWRLAKMNLAI  257
            V M+EPYKGR++DPCCGSGGMFVQSE+FV +H+GRL DI+IYGQESN TTW+LAKMNLAI
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240

Query  258  RGIESSQVSWNNEGSFLKDAHRDLKADFVIANPPFNDSDWSGELLRTDARWQYGTPPAGN  317
            RGI++    +N + +F +D H++LKAD+++ANPPFN SDW+ E L  D RWQ+G PP GN
Sbjct  241  RGIDNDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGN  299

Query  318  ANYAWIQHFLYHLAPKGTAGFVLAKGSLTSKSSGEGDIRKALIEAQLVDCIVNLPAKLFL  377
            ANYAWI+H +  LAP+GTAGFVLA+GS+++ + +E +IRK LIE +LV+CIV LP++LF 
Sbjct  300  ANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFY  359

Query  378  NTQIPACLWFLSRSKARGP---RSAEILFIDARSLGRLINRRTRELAPEDIAQIAETYHH  434
            +TQIP CLWF+S +K++     R  EILFIDAR +G++++R  +E++ EDI ++A+TYH 
Sbjct  360  STQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHS  419

Query  435  WRSANPS-YQDIKGFCSSALIDRVRDLDHVLTPGRYVGLPD-EEDDFDFATRFTSLKAEF  492
            WR++N   Y+DI GFC    ++ V++ + +LTPGRYVGL+D EED+  F  +   + +E+
Sbjct  420  WRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSEL  479

Query  493  EAQLKEEARLNKQILENL  510
              Q+     L+ QI  +L
Sbjct  480  SEQFAKSKELEDQIRKSL  497

126) O159_11410 in NC_022438


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  481 bits (1815),  Expect = 4e-137, Method: Compositional matrix adjust.
 Identities = 266/528 (51%), Positives = 385/528 (73%), Gaps = 28/528 (5%)

Query  10   TTKSLEATLWDAADELRGKMDSAQYKHVVLGLIFLKYVSDTFTVRHDELAR--LVDDPDS  67
            +T ++E  LW+AAD LRG MD+A+YK+V LGLIFLKYVSD+F  +  EL +    D+ D 
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  68   DYFMPTSQAKPSVLVDRYEYTAEGVFWIPECHRWEDLRAAGQQADIGSRVDKAMEAIERE  127
            D                 EY AE +FW+P   RW+ +   +++++IG  +DKAM AIE+E
Sbjct  62   D-----------------EYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKE  104

Query  128  NPSLRGVLPKNYTQREVSAESIGGLINTFSRHDLAAAEYKDLDVLGRVYEYFLGKFVSNE  187
            N SL+GVLPK+Y++  +  E +G++I+ F+   L+ +E +  DVLGRVYEYF++KF S E
Sbjct  105  NESLKGVLPKEYARPALDKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAE  163

Query  188  GKKAGEFYTPRSVVSLLVEMLQPFHGRVLDPACGSGGMFVQAEKFVTAHGGSRNDISVFG  247
            GK+AGEFYTP S+V LLVEM++P+ GR+ DP CGSGGMFVQ+E+FV  H G  +DI+++G
Sbjct  164  GKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYG  223

Query  248  QESNPTTWRLAKMNLAVRGIEGNLGREWADSFHADAHPDLRADFVIANPPFNDSKWGGER  307
            QESNPTTW+LAKMNLA+RGI+ +LG   AD+FH D H +L+AD+++ANPPFN S WG ER
Sbjct  224  QESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  308  LRTDPRWVYGAPPAQNANYAWLQNLLWHCAPTGTVGTVLANGSLSSQQNGEGAIRQAMVD  367
            L  D RW +G PP  NANYAW+++++   AP GT G VLANGS+S+  ++E  IR+ +++
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  368  GDVVECIVALPPQLFYGTQIPVCLWYLTKNKDGSGLVGKTPRIRLRETLFIDARSVGFME  427
             D+VECIV+LP QLFY+TQIPVCLW++++NK+ +G      + R  E LFIDAR +G M 
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNG-----KKERKNEILFIDAREIGHMV  398

Query  428  TRTVRAFSNEDVDRIADTYHAWRGTPTSAGQTYEDVPGFCRSVKTSEIAEHGYVLTPGRY  487
            +RT++ FS+ED++++A+TYH+WRGT    ++ YED++GFC+ V+  E+ ++ Y+LTPGRY
Sbjct  399  SRTLKEFSDEDIQKVAQTYHSWRGT---NDKYYEDIAGFCKVVNLEEVKNNEYILTPGRY  455

Query  488  VGAEAVEDDGEPLDEKISRLTMEIREGFTRRAEVQAAVLAALDSLEAG  535
            VG   VE+D EP+++K+ R+T E+ E F++  E++  +  +L++L  G
Sbjct  456  VGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYG  503

127) Kvar_4504 in NC_013850


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  481 bits (1813),  Expect = 5e-137, Method: Compositional matrix adjust.
 Identities = 272/525 (52%), Positives = 391/525 (75%), Gaps = 26/525 (4%)

Query  14   GFEDTLWDTANQLRGSVESSEYKHVVLSLVFLKFISDKFEARRQKMKDEGQGDFLEMEVF  73
            GFE+ LW++A++LRGS++++EYK+V L+L+FLK++SD FE + + +K++  +D  + +  
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDE-  63

Query  74   YQQDNIFYLPEEARWSFIKQHAKQDDIAVRIDTALSTIEKRNPTLKGALPDNYFSRQNLE  133
            Y  +NIF +P EARW +I+++AK+ +I+  ID A+ +IEK N +LKG LP +Y +R  L+
Sbjct  64   YLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-ARPALD  122

Query  134  TKKLASLIDTIDNIETLAHETDVEALSKEDLVGRVYEYFLGKFAATEGKGGGEFYTPKCV  193
              KL+ +ID       ++   +     K+D++GRVYEYF++KFA++EGK +GEFYTP  +
Sbjct  123  KEKLGDIIDL------FTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSI  176

Query  194  VTLLTEMLEPFQGKIYDPCCGSAGMFVQSVKFVESHQGKSRDIALYGQELTATTYKLAKM  253
            V LL EM+EP++G+IYDPCCGS+GMFVQS +FVE HQG+  DIA+YGQE  +TT KLAKM
Sbjct  177  VKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKM  236

Query  254  NLAIRGLSANLGERPADTFFSDQHPDLKADYILANPPFNLKDWRNDAELTKDPRFAGYRT  313
            NLAIRG+  +LGER ADTF +D H +LKADYILANPPFN  DW  +  L  D R   +  
Sbjct  237  NLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYRWQ-FGV  294

Query  314  PPTGNANYGWILHMLSKLSANGTAGFVLANGSMSSNTSGEGEIRAQMIENDLIDCMIALP  373
            PP GNANY+WI HM+SKL++NGTAGFVLANGSMS++  +E EIR ++IE+DL++C+++LP
Sbjct  295  PPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLP  354

Query  374  GQLFFTTQIPVCLWFMTKSKAADPAKGYRDRQGETLFIDARNLGTMINRTTKELTADDIA  433
            GQLF++TQIPVCLWF++++K+ +  K   +R+ E LFIDAR++G M++RT KE++ +DI 
Sbjct  355  GQLFYSTQIPVCLWFISNNKGQNGKK---ERKNEILFIDAREIGHMVSRTLKEFSDEDIQ  411

Query  434  TIADTYHAWRSTPEELAERVKRGDSKLAQYEDQAGFCKVATIEEIKANENVLTPGRYVGA  493
             +A+TYH+WR+T +               YED AGFCKV  +EE+K NE +LTPGRYVG 
Sbjct  412  KVAQTYHSWRGTNDKY-------------YEDIAGFCKVVNLEEVKNNEYILTPGRYVGL  458

Query  494  AEQEDDGVAFEIKMRELSQTLFAQMKQAQELDNAIRQNLEVLGYG  538
            A+ E+D  +FE KM+ ++  L  Q  +++EL++ IR++LE LGYG
Sbjct  459  ADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYG  503

128) Ppro_1858 in NC_008609


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  481 bits (1814),  Expect = 5e-137, Method: Compositional matrix adjust.
 Identities = 276/536 (52%), Positives = 385/536 (72%), Gaps = 47/536 (8%)

Query  8    TLWATADKLRANMDAAEYKHIVLGLIFVKYISDTFQTRSSELRERFGNPDDEYYIQDADD  67
             LW +ADKLR++MDAAEYK++ LGLIF+KY+SD+F+ +  EL++   +P    Y ++ D+
Sbjct  9    KLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQ---DP----YADEEDQ  61

Query  68   ETLVCELEDRDYYREVNTFWVPEAARWENIRAQAKQPDIGKRIDDALTLIEAENPKLKGI  127
            +           Y   N FWVP  ARW+ I  +AK+P+IG+ ID A+  IE EN  LKG+
Sbjct  62   DE----------YLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGV  111

Query  128  LDKRYARVQLPDGKLGELVDMVSTIGFGVTGESARDILGQVYEYFLGQFASAEGKRGGQF  187
            L K YAR  L   KLG+++D+  T+ +G T    +D+LG+VYEYF+++FASAEGK +G+F
Sbjct  112  LPKEYARPALDKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEF  170

Query  188  YTPASIVRTLVAILAPHHGQVYDPCCGSGGMFVQSEKFIEAHGGRIGDVSIYGQESNPTT  247
            YTP+SIV+ LV ++ P  G++YDPCCGSGGMFVQSE+F+E H GR++D++IYGQESNPTT
Sbjct  171  YTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTT  230

Query  248  WRLAAMNLAIRGIDFNLGKEPADTFVRNQHPDLRADFVLANPPFNVSDWWHPSLEGDPRW  307
            W+LA MNLAIRGID +LG   ADTF  + H +L+AD++LANPPFN SDW +  L +D RW
Sbjct  231  WKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRW  290

Query  308  EYGTPPQGNANYAWLQHMLYHLKPTGRAGIVLANGSMSSSQNSEGEIRRALVEADKVEVM  367
            ++G PP+GNANYAW++HM+  L P G AG+VLANGSMS+S + E EIR+ L+E D VE +
Sbjct  291  QFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECI  350

Query  368  VAMPGQLFFNTQIPACLWFLAKQKSV-----RQGEVLFIDARKLGTMISRVQIEFSDEDI  422
            V++PGQLF++TQIP CLWF++++K+      R+ E+LFIDAR +G M+SR   EFSDEDI
Sbjct  351  VTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDI  410

Query  423  QRIADTVHAWRGDGEIPLNPPLPKGEAETIPPFTKGGPGGIYQDIPGFCRSVSLAEIAEH  482
            Q++A+T H+WRG  +                          Y+DI+GFC+ V+L E+ ++
Sbjct  411  QKVAQTYHSWRGTND------------------------KYYEDIAGFCKVVNLEEVKNN  446

Query  483  GHVLTPGRYVGAEAVEDDDEAFTEKMQRLTETLGEQMARGAELDELIRRKLGGLGY  538
              +LTPGRYVG   VE+D+E+F +KM+R+T  L+EQ A++ EL++ IR+ L GLGY
Sbjct  447  EYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGY  502

129) SEEB0189_19740 in NC_021844


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  481 bits (1814),  Expect = 5e-137, Method: Compositional matrix adjust.
 Identities = 271/525 (52%), Positives = 390/525 (75%), Gaps = 26/525 (4%)

Query  14   GFEDTLWDTANQLRGSVESSEYKHVVLSLVFLKFISDKFEARRQKMKDEGQGDFLEMEVF  73
            GFE+ LW++A++LRGS++++EYK+V L+L+FLK++SD FE + + +K++  +D  + +  
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDE-  63

Query  74   YQQDNIFYLPEEARWSFIKQNAKQDDIAVRIDTALSTIEKRNPTLKGALPDNYFSRQNLE  133
            Y  +NIF +P EARW +I++NAK+ +I+  ID A+ +IEK N +LKG LP +Y +R  L+
Sbjct  64   YLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-ARPALD  122

Query  134  TKKLASLIDTIDNIETLAHETDVEALSKEDLVGRVYEYFLGKFAATEGKGGGEFYTPKCV  193
              KL+ +ID       ++   +     K+D++GRVYEYF++KFA++EGK +GEFYTP  +
Sbjct  123  KEKLGDIIDL------FTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSI  176

Query  194  VTLLTEMLEPFQGKIYDPCCGSAGMFVQSVKFVESHQGKSRDIALYGQELTATTYKLAKM  253
            V LL EM+EP++G+IYDPCCGS+GMFVQS +FVE HQG+  DIA+YGQE  +TT KLAKM
Sbjct  177  VKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKM  236

Query  254  NLAIRGLSANLGERPADTFFSDQHPDLKADYILANPPFNLKDWRNDAELTKDLRFAGYRT  313
            NLAIRG+  +LGER ADTF +D H +LKADYILANPPFN  DW  +  L  D R   +  
Sbjct  237  NLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYRWQ-FGV  294

Query  314  PPTGNANYGWILHMLSKLSANGTAGFVLANGSMSSNTSGEGEIRAQMIENDLIDCMIALP  373
            PP GNANY+WI HM+SKL++NGTAGFVLANGSMS++  +E EIR ++IE+DL++C+++LP
Sbjct  295  PPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLP  354

Query  374  GQLFFTTQIPVCLWFMTKSKAADPAKGYRNRQGETLFIDARNLGTMMNRTTKELTADDIA  433
            GQLF++TQIPVCLWF++++K+ +  K   +R+ E LFIDAR++G M++RT KE++ +DI 
Sbjct  355  GQLFYSTQIPVCLWFISNNKGQNGKK---ERKNEILFIDAREIGHMVSRTLKEFSDEDIQ  411

Query  434  TIADTYHAWRSTPEELAARVKRGDSKLAQYEDQAGFCKVATIAEMKANDYVLTPGRYVGA  493
             +A+TYH+WR+T +               YED AGFCKV  + E+K N+Y+LTPGRYVG 
Sbjct  412  KVAQTYHSWRGTNDKY-------------YEDIAGFCKVVNLEEVKNNEYILTPGRYVGL  458

Query  494  AEQEDDGVAFETKMRELSQTLFAQMKQAEELNKAIRQNLEAFGYG  538
            A+ E+D  +FE KM+ ++  L  Q  ++ EL+  IR++LE++GYG
Sbjct  459  ADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYG  503

130) Nhal_0897 in NC_013960


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  481 bits (1812),  Expect = 6e-137, Method: Compositional matrix adjust.
 Identities = 298/505 (60%), Positives = 404/505 (80%), Gaps = 7/505 (1%)

Query  16   LQKSLWKSADRLRKNMDAAEYKHVVLGLIFLKYISDAFEELHAKLSEGLGEYAGADPEDA  75
            ++  LW++AD+LR +MDAAEYK+V LGLIFLKY+SD+FEE    L ++   YA  D ED 
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQD--PYA--DEEDQ  61

Query  76   DEYRAENVFFVPEGARWSYLQARAKLPGIGKDVDEAMEAIEKENPTLKGVLPKQYARQNL  135
            DEY AEN+F VP  ARW Y++  AK P IG+ +D AM AIEKEN +LKGVLPK+YAR  L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  136  DKASlgalidllgkiglgdaTARSRDILGRVYEYFLgefaaaegkkggQFYTPAAIVKLL  195
            DK  LG +IDL+     +   +R +D+LGRVYEYF++ FA+AEGK++G+FYTP++IVKLL
Sbjct  122  DKEKLGDIIDLFTFKLGDT-ESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  196  VNMLEPYKGRVYDPCCGSGGMFVQSEKFVEVHQGRIDDISIYGQESNQTTYRLCRMNLAI  255
            V+M+EPYKGR+YDPCCGSGGMFVQSE+FVE HQGR+DDI+IYGQESN TT +L +MNLAI
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240

Query  256  RGIDGSNVRWNGEGSFLNDAHKDMKAEYIIANPPFNDSDWSGELLRDDPRWQFGVPPVGN  315
            RGID     +N++ +F ND HK++KA+YI+ANPPFN SDW+ E L DD RWQFGVPP GN
Sbjct  241  RGIDNDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGN  299

Query  316  ANFAWMQHMIYHLAPNGTlglvlangslssnsggEGEIRKAIIEAKLVDCIVALPDKLFY  375
            AN+AW++HMI  LAPNGT G+VLANGS+S+++ +E EIRK +IE  LV+CIV+LP++LFY
Sbjct  300  ANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFY  359

Query  376  NTGIPACLWFISHDRRNHNFRNREDEILFIDARNLGQMITRRNRDFSDEDIARIADTYHA  435
            +T IP CLWFIS+++ ++  ++R +EILFIDAR++G+M++R  ++FSDEDI ++A+TYH+
Sbjct  360  STQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHS  419

Query  436  WRNKDGG-YEDVKGFCKAATLEDVRKHKHVLTPGRYVGIPDEEDDGVPFEEKMTKLTEEL  494
            WR  ++  YED+ GFCK   LE+V+++  +LTPGRYVG++D E+D  PFE+KM ++T EL
Sbjct  420  WRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSEL  479

Query  495  AAQMAQGQALDARIRENLAKVGFGV  519
            + Q A+++ L+ +IR +L  +G+GV
Sbjct  480  SEQFAKSKELEDQIRKSLEGLGYGV  504

131) ETAC_09220 in NC_020796


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  481 bits (1812),  Expect = 6e-137, Method: Compositional matrix adjust.
 Identities = 275/524 (53%), Positives = 382/524 (73%), Gaps = 27/524 (5%)

Query  13   GFEETLWDTANQLRGSVESSEYKHVVLSLVFLKFITDKFEAKRKQLIANGQEAFVDMDVF  72
            GFEE LW++A++LRGS++++EYK+V L+L+FLK+++D FE K K+L    Q+++ D +  
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKEL---KQDPYADEEDQ  61

Query  73   --YQQDNVFFLPEVARWSYVKARAKQDDIAVIIDTALATIEKSNSALTGALPDNYFSRQG  130
              Y  +N+F +P  ARW Y++  AK+ +I+ +ID A+ +IEK N +L G LP +Y +R +
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-ARPA  120

Query  131  LEVKKLASLIDTIENIDTLASECQLSEEDLVGRVYEYFLGRFAASEGKGGGEFYTPKSVV  190
            L+  KL+ +ID +       ++ +   +D++GRVYEYF+++FA++EGK +GEFYTP S+V
Sbjct  121  LDKEKLGDIIDLFTFK---LGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIV  177

Query  191  TLLAEMLEPYEGKIYDPCCGSGGMFVQSLKFVESHQGKSKDIAIYGQELTTTTYKLAKMN  250
             LL EM+EPY G+IYDPCCGSGGMFVQS +FVE HQG+  DIAIYGQE   TT KLAKMN
Sbjct  178  KLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMN  237

Query  251  LAIRGLIGNLGERPADTFFADQHPDLKADFIMANPPFNLKEWRSESELTDDPRFAGFRTP  310
            LAIRG+  +LGER ADTF  D H +LKAD+I+ANPPFN  +W ++  L DD R   F  P
Sbjct  238  LAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYRWQ-FGVP  295

Query  311  PTGNANYAWILHMLSKLSVDGTAGFVLANGSMSSNTSGEGEIRQKLIEDDRIECMIALPG  370
            P GNANYAWI HM+SKL+ +GTAGFVLANGSMS++  +E EIR++LIE+D +EC+++LPG
Sbjct  296  PKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPG  355

Query  371  QLFYTTQIPVCLWFISKSKQANPRYGYRARSGETLFIDARELGTMVSRTNKELTVADIAR  430
            QLFY+TQIPVCLWFIS++K  N +   + R  E LFIDARE+G MVSRT KE++  DI +
Sbjct  356  QLFYSTQIPVCLWFISNNKGQNGK---KERKNEILFIDAREIGHMVSRTLKEFSDEDIQK  412

Query  431  IADTFHAWRCSASELKRRVKAGEISISEYQDQAGFCKVATLDEIKANDFVLTPGRYVGAA  490
            +A+T+H+WR +                 Y+D AGFCKV  L+E+K N+++LTPGRYVG A
Sbjct  413  VAQTYHSWRGTNDKY-------------YEDIAGFCKVVNLEEVKNNEYILTPGRYVGLA  459

Query  491  EVADDGIAFETKMRELTQTLYRQMNEAQALDAAIRANMEALGYG  534
            +V +D  +FE KM+ +T  L  Q   ++ L+  IR ++E+LGYG
Sbjct  460  DVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYG  503

132) Spica_2702 in NC_015732


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  479 bits (1805),  Expect = 2e-136, Method: Compositional matrix adjust.
 Identities = 279/495 (57%), Positives = 378/495 (77%), Gaps = 8/495 (1%)

Query  20   DMLWKSADKLRKNIDAAEYKHVVLGLIFLKYISDSFEELHAKLEAEIANGADPEDRDEYR  79
            + LW++ADKLR ++DAAEYK+V LGLIFLKY+SDSFEE    L  +    AD ED+DEY 
Sbjct  8    EKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPY--ADEEDQDEYL  65

Query  80   AENVFFVPETARWSYLVSKAKDPEIGKYVDEAMDALEKENASLKGVLPKVYARGNLDPTS  139
            AEN+F VP  ARW Y+  +AK PEIG+ +D AM A+EKEN SLKGVLPK YAR  LD   
Sbjct  66   AENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEK  125

Query  140  LGGLLDLIGNIALGEAKERSADLLGHVFEYFLGEFALAEGKKGGQFYTPKSVVELLVEML  199
            LG+++DL+  + LG++  R  D+LG+V+EYF++ FA AEGK++G+FYTP S+V LLVEM+
Sbjct  126  LGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMI  184

Query  200  EPYKGRVFDPCCGSGGMFVQSEKFVMAHQGNINDISIYGQESNQTTWRLCKMNLAIRGID  259
            EPYKGR++DPCCGSGGMFVQSE+FV  HQG ++DI+IYGQESN TTW+L KMNLAIRGID
Sbjct  185  EPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGID  244

Query  260  SSQVKWNNEGSFLNDAHKDLKADFVIANPPFNDSDWAGELLRNDGRWKFGIPPASNANYA  319
            +    +N + +F ND HK+LKAD+++ANPPFN SDW+ E L +D RW+FG+PP +NANYA
Sbjct  245  NDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYA  303

Query  320  WIQHFLYHLNPTGVAGFVLAKGSLTSKSSGEGEIRKALVEARLVDCIVNLPAKLFLNTQI  379
            WI+H +  L P G AGFVLA+GS+++ + +E EIRK L+E  LV+CIV LP++LF +TQI
Sbjct  304  WIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQI  363

Query  380  PACLWFLSRNKANGGYRNRTDEILFIDARNEGVLINRRTRILREEDIQKIAQTYHEWRKV  439
            P CLWF+S NK++ G ++R +EILFIDAR+ G +++R  + + +EDIQK+AQTYH WR  
Sbjct  364  PVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGT  423

Query  440  NGN-YQDVKGFCNSATVERVKELDYVLTPGRYVGLPddeddfdfaeRFTQLKAEFEAQLK  498
            N++ Y+D+ GFC+   +E VK+ +Y+LTPGRYVGL+   D  +  E F Q    + ++L 
Sbjct  424  NDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLA---DVEEDEEPFEQKMKRITSELS  480

Query  499  EEAELNKAILDNLKK  513
            E+   +K + D+++K
Sbjct  481  EQFAKSKELEDQIRK  495

133) CE2327 in NC_004369


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  479 bits (1805),  Expect = 2e-136, Method: Compositional matrix adjust.
 Identities = 270/523 (52%), Positives = 389/523 (75%), Gaps = 30/523 (5%)

Query  17   LKDTLWKAADKLRGSMDASQYKDVILGLVFLKYVSDAFAERRTQLHDELVAEGMTDDQTA  76
            + + LW+AADKLRGSMDA++YK+V LGL+FLKYVSD+F E+  +L ++  A+        
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADE-------  58

Query  77   MLIDDTDEYTGHGVFWVPDNARWEYLAQNAKGLSANYGNAPRNIGELVDDAMDAIMVANP  136
               +D DEY ++ +FWVP +ARW+Y+ +NAK           +IG+L+D AM AI   N 
Sbjct  59   ---EDQDEYLAENIFWVPKEARWQYINDNAK---------KPEIGQLIDKAMIAIEKENE  106

Query  137  ALSATLPRIYNRESVDQRRLGELIDLFNTARFT-GQGPGRARDLLGEVYEYFLEKFARAE  195
            +L + LP+ Y R ++D+ +LG++IDLF    F  G+  +R +D+LG VYEYF+ KFA AE
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLFT---FKLGDTESRKQDVLGRVYEYFIAKFASAE  163

Query  196  GKRGGEFYTPAGVVRVLVEVLEPTSGRVYDPCCGSGGMFVQTEKFLDAHNKDRTAIAVYG  255
            GK +GEFYTP+++V++LVE++EP  GR+YDPCCGSGGMFVQ+E+F++ H+     IA+YG
Sbjct  164  GKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYG  223

Query  256  QELNERTWRMAKMNLAIHGLNANLGPRWGDTFARDLHPEMQADYIMANPPFNIKDWARNE  315
            QE N  TW++AKMNLAI+G++ +LG R +DTF  DLH  ++ADYI+ANPPFN  DW+++ 
Sbjct  224  QESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  316  --EDPRWRYGVPPKNNANYAWIQHIISKLAPGGSAGVVMAngsmssnsggegKIRAELVE  373
              +D RW++GVPPK NANYAWI+H+ISKLAP G+AG V+ANGSMS+++ +E  IR +L+E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  374  ADLVSCMVALPTQLFRSTGIPVCVWFFAKDKTVGDQGAIDRTGQVLFIDARNLGHMIDRA  433
             DLV C+V+LP QLF ST IPVC+WF++++K  G++G  +R  ++LFIDAR++GHM+ R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRT  401

Query  434  ERALSDEDIAKIADTFHTWRGTPSAKGRTYEDEAGFCYSATLEEIKDADYALTPGRYVGA  493
             + +SDEDI K+A+T+H+WRGT   +++ YED AGFC    LEE+K+ +Y LTPGRYVG 
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGT---NDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGL  458

Query  494  AEIEDDGEPIDEKIERLKKELLDQFDESERLAAVVREQLRGVS  536
            A++E+D EP+++K+ R+  EL +QF  S  L   +R  L G++
Sbjct  459  ADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLG  501

134) hsdM in NC_016052


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  478 bits (1802),  Expect = 3e-136, Method: Compositional matrix adjust.
 Identities = 291/503 (58%), Positives = 394/503 (79%), Gaps = 9/503 (1%)

Query  7    ANLGFEKELWAAADAMRSHVSSSDYRKVVVGLIFLKYVSDAFEYRyqelleegygdeedR  66
            A +GFE  LW AAD +R+ + +++Y++V +GLIFLKYVSD+FE +Y+EL ++ Y+DEED+
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  67   DAYIEKNIFFVPEAARWKKIASSAHSPEIGIVLDEAMRAVEKENNSLKGVLPIIYASPDL  126
            D Y+  NIF VP  ARW+ I  +A  PEIG ++D AM A+EKEN+SLKGVLP  YA P L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  127  DKRVLGNVVDIFTNINMHDQSEEKDLLGRTYEYFIEQFAAQEGKGGGEFYTPSSIVKTIV  186
            DK  LG+++D+FT    + +S  +D+LGR YEYFI +FA+ EGK +GEFYTPSSIVK +V
Sbjct  122  DKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  187  EVLKPYKGRVYDPACGSGGMFVQSAKFVKQHSGNINNLSIYGEESNSDTWKMAKMNMAIR  246
            E++ PYKGR+YDP CGSGGMFVQS +FV +H G +++++IYG+ESN+ TWK+AKMN+AIR
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  247  GLEADFGPHQADTFLNDIHPTLKADYIMANPPFNVSDWWDESLQDDVRWKYGTPPKSNAN  306
            G++ D+G ++ADTF ND+H  LKADYI+ANPPFN SDW +E L DD RW++G PPK+NAN
Sbjct  242  GIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNAN  301

Query  307  YAWMQHMISHLAPNGKIGLVLANGSLSTLNSGEGEIRKRIIDDDLVEGIVALPSNLFYSV  366
            YAW++HMIS LAPNG  G+VLANGS+ST   +E EIRK +I++DLVE IV+LP++LFYS 
Sbjct  302  YAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYST  361

Query  367  TIPACIWFISRNKKQNGKT------VFIDARKMGTLVDRKHRDFSNDEIKKIADTFESFQ  420
             IP C+WFIS NK QNGK       +FIDAR +G +V R  ++FS+++I+K+A+T++S +
Sbjct  362  QIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWR  421

Query  421  NGE---LEDAKGFCAVVETADIAKQDYILTPGRYVGIeeqeedaepfdeKMERLTSELSE  477
              +    ED  GFC VV+  ++ +++YILTPGRYVG+ + EED EPF++KM R+TSELSE
Sbjct  422  GTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSE  481

Query  478  MFDKSHELEDKIRKRLEEIGFGL  500
             F KS ELED+IRK LE +G+G+
Sbjct  482  QFAKSKELEDQIRKSLEGLGYGV  504

135) Bcav_3915 in NC_012669


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  476 bits (1794),  Expect = 2e-135, Method: Compositional matrix adjust.
 Identities = 265/520 (51%), Positives = 385/520 (75%), Gaps = 30/520 (5%)

Query  21   LKDTLWKAADKLRGSMDASQYKDVILGLVFLKYVSDAFDERRAVIAAELAADGIGEEQAG  80
            + + LW+AADKLRGSMDA++YK+V LGL+FLKYVSD+F+E+      EL  D  ++E   
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEK----YKELKQDPYADE---  58

Query  81   PLLEEVDEYRAAGVFWVPPRARWGYLAQHAKGRPAGDPEGQATIGELVDEAMVLIMGTNP  140
               E+ DEY A  +FWVP  ARW Y+ ++AK         ++ IG+L+D AM+ I   N 
Sbjct  59   ---EDQDEYLAENIFWVPKEARWQYINDNAK---------KPEIGQLIDKAMIAIEKENE  106

Query  141  ALATTLPQIFNKENVDQRRLGELIDLFNSARFT-GDGARKARDVLGEVYEYFLGKFAAAE  199
            +L   LP+ + +  +D+ +LG++IDLF    F  GD   + +DVLG VYEYF++KFA+AE
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLFT---FKLGDTESRKQDVLGRVYEYFIAKFASAE  163

Query  200  GKRGGEFYTPPGVVRVLVEVLEPYRGRVYDPCCGSGGMFVQAEKFIERHGEDPQAISVYG  259
            GK +GEFYTP+++V++LVE++EPY+GR+YDPCCGSGGMFVQ+E+F+E+H    + I++YG
Sbjct  164  GKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYG  223

Query  260  QELNERTWRMAKMNLAVHGLTAQLGPRWGDTFARDVHPDVQMDFVMANPPFNIKDWA--R  317
            QE N  TW++AKMNLA++G+  +LG R +DTF  D+H +++ D+++ANPPFN  DW+  R
Sbjct  224  QESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  318  NAEDARWKFGVPPAGNANYAWIQHILSKLAPGGSAGVVMANGSMSSNSVGEGEIRAALVE  377
              +D RW+FGVPP GNANYAWI+H++SKLAP G+AG V+ANGSMS+++ +E EIR  L+E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  378  VDLVSCMVALPTQLFRSTGIPVCVWFFakskaagasgsVDRTGQVLFIDARNLGHMVTRA  437
             DLV C+V+LP QLF ST IPVC+WF++++K+  +    +R  ++LFIDAR++GHMV+R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKK--ERKNEILFIDAREIGHMVSRT  401

Query  438  ERELSDEDIARIAGTFHAWRGAPSASGASYEDVPGFCYSATLSEIKEAGYALAPGRYVGA  497
             +E+SDEDI ++A T+H+WRG   +++  YED++GFC    L E+K+  Y L+PGRYVG 
Sbjct  402  LKEFSDEDIQKVAQTYHSWRG---TNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGL  458

Query  498  PEVEDDGEPIEEKIERLTAELFAQFEESARLEQVVREQLG  537
            ++VE+D EP+E+K+ R+T+EL  QF  S  LE+ +R  L 
Sbjct  459  ADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLE  498

136) KN400_0451 in NC_017454


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  474 bits (1788),  Expect = 7e-135, Method: Compositional matrix adjust.
 Identities = 280/509 (56%), Positives = 385/509 (76%), Gaps = 16/509 (3%)

Query  13   ANIGYEAELWQMADALRGSMDAAEYKHVALGLLFLKYISDAFEEKHAQLESERSQGADPE  72
            A IG+E  LWQ AD LRGSMDAAEYK+VALGL+FLKY+SD+FEEK  +L  +    AD E
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPY--ADEE  59

Query  73   DPDEYRALNIFWVPPEARWSHLKAQAKQPTIGQLVDDAMAGIERDNPALKGVLPKEYARP  132
            D DEY A NIFWVP EARW  ++ +AK+P IGQL+D AM +IE++N +LKGVLPKEYARP
Sbjct  60   DQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARP  119

Query  133  ALDKQRLGQLIDLISNIRVGDAESRAKDVLGRVYEYFLSQFASAEGKKGGEFYTPRCVVR  192
            ALDK++LG++IDL++ +++GD+ESR +DVLGRVYEYF+++FASAEGK++GEFYTP  +V+
Sbjct  120  ALDKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVK  178

Query  193  LLVEMIEPYKGRVYDPCCGSSGMFVQSVEFIRahangngnsgnakaDISIYGQESNYTTW  252
            LLVEMIEPYKGR+YDPCCGS+GMFVQS  F+        +      DI+IYGQESN TTW
Sbjct  179  LLVEMIEPYKGRIYDPCCGSGGMFVQSERFV-------EKHQGRLDDIAIYGQESNPTTW  231

Query  253  RLAKMNLAIRGIDGQIA--HGDTFHNDRFPDLKADFILANPPFNISDWGGDRLRDDKRWQ  310
            +LAKMNLAIRGID +++  ++DTFHND   +LKAD+ILANPPFN SDWG +RL DD RWQ
Sbjct  232  KLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQ  291

Query  311  YGVPPTGNANFAWVQHMIYHLAPKGVAGFILGNISLTSETGGEDTIRKGIVDANLVDCIV  370
            +GVPP GNAN+AW++HMI  LAP+G AGF+L+N S+++   +E  IRK +++ +LV+CIV
Sbjct  292  FGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIV  351

Query  371  TLPDRLFYSTPIPAGIWILRRGRDFDREVNKPNREILFIDASRLGKSVTRTHRELTDDDL  430
            TLP++LFYST IP  +W++   ++ +   +  + EILFIDA  +G  V+RT +E++D+D+
Sbjct  352  TLPGQLFYSTQIPVCLWFISNNKG-QNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDI  410

Query  431  ERIACTYRNWQKCSDAYL-DVEGFCRRVELEEVIANGYNLLPAAYVNQGHLRATGGPQLH  489
            +++A TY++W+  +D Y  D+ GFC+ V+LEEV  N Y L P+ YV  +++     P  +
Sbjct  411  QKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQ  470

Query  490  DVIHSNFRNETSQSLDRVTDLNKAFEESL  518
             +    + +E S+ + +  +L+  +  SL
Sbjct  471  KM--KRITSELSEQFAKSKELEDQIRKSL  497

137) hsdM2 in NC_014145


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  472 bits (1778),  Expect = 3e-134, Method: Compositional matrix adjust.
 Identities = 270/515 (53%), Positives = 388/515 (76%), Gaps = 20/515 (3%)

Query  8    TLWATADKLRSSMDAAEYKHIVLGLIFIKYISDAFDERREQLKAQFNDPASDLYLPDAAD  67
             LW +ADKLR+SMDAAEYK++ LGLIF+KY+SD+F+E+  +LK        D Y  +  +
Sbjct  9    KLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQ-------DPYADEEDQ  61

Query  68   QEAALEERDYYTMANVFWVPEAARWETLRGQAKFWDIGIRIDQALDAIEADNPRLKGILD  127
            +E        Y   N+FWVP  ARW+ + ++AK  +IG  ID+A+ AIE +N  LKG+L 
Sbjct  62   DE--------YLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLP  113

Query  128  KRFGRAQLEPGKMGELVDLVSTIGFGSGTHAKDVLGEVYEYFLGQFASAEGKKGGQFYTP  187
            K ++R+ L+  K+G+++DL +    ++ ++ +DVLG VYEYF+++FASAEGK++G+FYTP
Sbjct  114  KEYARPALDKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTP  173

Query  188  ASVVKVLVEVLAPHKGKVYDPCCGSGGMFVQSEKFIESHGGRFGDISIYGQEANPTTWRL  247
            +S+VK+LVE++ P KG++YDPCCGSGGMFVQSE+F+E H GR++DI+IYGQE+NPTTW+L
Sbjct  174  SSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKL  233

Query  248  VAMNLAIRGMDFNLGKEPADTFHRDQHPDLKADYVLANPPFNISDWGGDRLLDDKRWLYG  307
              MNLAIRG+D +LG   ADTFH D H +LKADY+LANPPFN SDWG +RLLDD RW +G
Sbjct  234  AKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFG  293

Query  308  TPNPSNANYAWLQHILWHLNASGQAGVVLANGSMSSNQNNEGVIRKamveadvvevmvaL  367
             P  +NANYAW++H++  L ++G AG VLANGSMS++ ++E  IRK ++E D+VE +V+L
Sbjct  294  VPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTL  353

Query  368  PPQLFFNTQIPACLWFLTKSKTAHG-RDRRGEVLFIDARKLGRMEGRVFRVFDDEDVAKI  426
            P QLF++TQIP CLWF++++K  +G ++R+ E+LFIDAR +G+M +R ++ F DED+ K+
Sbjct  354  PGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKV  413

Query  427  ADTVHRWRQDGQLEGQEPYADVPGFCRAVKLTEIAEHGHVLTPGRYVGAEAVddddEAFS  486
            A+T H WR       +  Y D++GFC+ V+L E+ ++  +LTPGRYVG   V++D+E+F 
Sbjct  414  AQTYHSWRGT----NDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFE  469

Query  487  EKMERLTAQLSEQMAKGAKLDAVIREKLGGLGYAV  521
            +KM R+T++LSEQ AK+  L+  IR  L GLGY+V
Sbjct  470  QKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

138) MROS_1293 in NC_018178


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  470 bits (1770),  Expect = 1e-133, Method: Compositional matrix adjust.
 Identities = 275/458 (61%), Positives = 367/458 (81%), Gaps = 8/458 (1%)

Query  17   EKQLWKAADKLRKNIDAAEYKHIVLGLIFLKYISDSFERHyellkkgegeyegADPEDRD  76
            E +LW+AADKLR ++DAAEYK++ LGLIFLKY+SDSFE  Y  LK++      AD ED+D
Sbjct  7    EEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPY----ADEEDQD  62

Query  77   EYKAENIFFVPPSARWSYLQKRAKLPEIGKDIDSAMDAIERDNPSLKDVLPKVYARGNID  136
            EY AENIF VP  ARW Y++  AK PEIG+ ID AM AIE++N SLK+VLPK YAR  +D
Sbjct  63   EYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALD  122

Query  137  PTNLGGLIDLIS-NISITQ-KDGDFLGKVFEYFLGQFALAEGKKGGQFYTPRSVVQLLVE  194
              +LG++IDL++ +++ T+ +  D LG+V+EYF+++FA AEGK++G+FYTP S+V+LLVE
Sbjct  123  KEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVE  182

Query  195  MLEPYKGRVFDPCCGSGGMFVQSEKFVESHQGNVNDISIYGQESNLTTWRLCKMNLAIRG  254
            M+EPYKGR++DPCCGSGGMFVQSE+FVE HQG ++DI+IYGQESN TTW+L KMNLAIRG
Sbjct  183  MIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRG  242

Query  255  IDSSQVKWNNEGSFLNNAHKDLKADFVIANPPFNDSDWSGELLRKDARWQYGIPPVNNAN  314
            ID+    +N + +F N+ HK+LKAD+++ANPPFN SDW+ E L  D RWQ+G+PP  NAN
Sbjct  243  IDNDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNAN  301

Query  315  YAWIQHFIYHLAPNGQAGFVLAKGALTSKTSGEGEIRKALVEARLIDCIVNLPSKLFLNT  374
            YAWI+H I  LAPNG AGFVLA+G++++   +E EIRK L+E  L++CIV LP++LF +T
Sbjct  302  YAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYST  361

Query  375  QIPASLWFINRNKSNGKFRNRKDEILFIDARNMGHLINRRTREFSEEDIQKIASTFHNWR  434
            QIP  LWFI+ NK++   ++RK+EILFIDAR++GH+++R  +EFS+EDIQK+A T+H+WR
Sbjct  362  QIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWR  421

Query  435  NPDGK-YEDIKGFCKSATIEEVAALDYVLTPGRYVGLP  471
              ++K YEDI GFCK   +EEV   +Y+LTPGRYVGL+
Sbjct  422  GTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLA  459

139) NT01EI_1012 in NC_012779


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  470 bits (1772),  Expect = 1e-133, Method: Compositional matrix adjust.
 Identities = 272/524 (52%), Positives = 384/524 (74%), Gaps = 27/524 (5%)

Query  17   GFEETLWDTANQLRGSVESSEYKHVVLSLVFLKFITDKFEAKRKQLMANGQEAFVDMDVF  76
            GFEE LW++A++LRGS++++EYK+V L+L+FLK+++D FE K K+L    Q+++ D +  
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELK---QDPYADEEDQ  61

Query  77   --YQQDNVFFLPEAARWSYVKARAKQDDIAVIIDSALATIEKSNSALTGALPDNYFSRQG  134
              Y  +N+F +P  ARW Y++  AK+ +I+ +ID A+ +IEK N +L G LP +Y +R +
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-ARPA  120

Query  135  LEVKKLASLIDTIENIDTLASECQLSEEDLVGRVYEYFLGRFAASEGKGGGEFYTPKSVV  194
            L+  KL+ +ID +       ++ +   +D++GRVYEYF+++FA++EGK +GEFYTP S+V
Sbjct  121  LDKEKLGDIIDLFTFK---LGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIV  177

Query  195  TLLAEMLEPYEGKIYDPCCGSGGMFVQSLKFVESHQGKSKDIAIYGQELTTTTYKLAKMN  254
             LL EM+EPY G+IYDPCCGSGGMFVQS +FVE HQG+  DIAIYGQE   TT KLAKMN
Sbjct  178  KLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMN  237

Query  255  LAIRGLIGNLGERPADTFFADQHPDLKADFIMANPPFNLKEWRSESELTNDPRFAGFRTP  314
            LAIRG+  +LGER ADTF  D H +LKAD+I+ANPPFN  +W ++  L +D R   F  P
Sbjct  238  LAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYRWQ-FGVP  295

Query  315  PTGNANYAWILHMLAKLSVDGTAGFVLANGAMSSNTSGEGEIRQKLIEDDRIECMIALPG  374
            P GNANYAWI HM++KL+ +GTAGFVLANG+MS++  +E EIR++LIE+D +EC+++LPG
Sbjct  296  PKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPG  355

Query  375  QLFYTTQIPVCLWFISKSKQANPRYGYRARSGETLFIDARELGTMVSRTNKELTAADIAR  434
            QLFY+TQIPVCLWFIS++K  N +   + R  E LFIDARE+G MVSRT KE++  DI +
Sbjct  356  QLFYSTQIPVCLWFISNNKGQNGK---KERKNEILFIDAREIGHMVSRTLKEFSDEDIQK  412

Query  435  IADTFHAWRCSESELKRRVKAGEISISEYQDHAGFCKVATLDEIKANDFVLTPGRYvgaa  494
            +A+T+H+WR ++                Y+D AGFCKV  L+E+K N+++LTPGRYVG A
Sbjct  413  VAQTYHSWRGTNDKY-------------YEDIAGFCKVVNLEEVKNNEYILTPGRYVGLA  459

Query  495  evaddgvaFETKMRELTQTLYRQINEAQALDAAIRANMEALGYG  538
            +V +D  +FE KM+ +T  L  Q+  ++ L+  IR ++E+LGYG
Sbjct  460  DVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYG  503

140) Cag_1120 in NC_007514


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  470 bits (1773),  Expect = 7e-134, Method: Compositional matrix adjust.
 Identities = 270/467 (58%), Positives = 365/467 (79%), Gaps = 13/467 (2%)

Query  19   LEKQLWKTADKLRKNIDAAEYKHIVLGLIFLKYISDSFEELYAKLQAEEANGADPEDKDE  78
            +E +LW++ADKLR ++DAAEYK++ LGLIFLKY+SDSFEE Y  L+ +    AD ED+DE
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPY--ADEEDQDE  63

Query  79   YKAENVFFVPQDARWNYLQSKAKQPEIGKFVDDAMDVIEKENASLKGVLPKVFARQNLDP  138
            Y AEN+F VP++ARW+Y++ +AK+PEIG+++D AM  IEKEN SLKGVLPK +AR  LD 
Sbjct  64   YLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALDK  123

Query  139  TSLGELIDLVGNIALGDAKARSADVLGHVFEYFLGEFALAEGKKGGQFYTPRSVVELLVE  198
              LG++IDL   + LGD+ +R  DVLG+V+EYF++ FA AEGK++G+FYTP S+V LLVE
Sbjct  124  EKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVE  182

Query  199  MLEPYKGRVFDPCCGSGGMFVHSETFVTEHQGKVNDISIYGQESNQTTWRLCKMNLAIRG  258
            M+EPYKGR++DPCCGSGGMFV+SE FV  HQG+++DI+IYGQESN TTW+L KMNLAIRG
Sbjct  183  MIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRG  242

Query  259  IDSSQVKWNNEGSFLNDAHKDLKADYIIANPPFNVSDWGGDLMRSDGRWQYGTPPTGNAN  318
            ID+    +N + +F ND HK+LKADYI+ANPPFN SDWG + +  D RWQ+G PP GNAN
Sbjct  243  IDNDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNAN  301

Query  319  FAWMQHFIYHLAPNGQAGVVLAKGALTSKTSGEGDIRKALVENGLIDCIVNLPAKLFLNT  378
            +AW++H I  LAPNG AG VLA+G++++   +E +IRK L+E++L++CIV LP++LF +T
Sbjct  302  YAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYST  361

Query  379  QIPAALWFLRRDAKFFVSTNGKFRDRSNEILFIDTRNLGHLINRRTRELSKEDIYKIAST  438
            QIP  LWF+  +     + NGK ++R NEILFID+R++GH+++R  +E+S EDI K+A T
Sbjct  362  QIPVCLWFISNNK----GQNGK-KERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQT  416

Query  439  YHAWRTLPEALNGSAYADILGFCASVAISKVAELDYVLTPGRYVGLP  485
            YH+WR    + N+  Y DI GFC  V +  V + +Y+LTPGRYVGL+
Sbjct  417  YHSWR----GTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLA  459

141) EcE24377A_2909 in NC_009801


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  470 bits (1773),  Expect = 7e-134, Method: Compositional matrix adjust.
 Identities = 274/497 (56%), Positives = 384/497 (78%), Gaps = 10/497 (2%)

Query  17   LWKAADKLRKNIDAAEYKHVVLGLIFLKYISDSFESHYELLKAGEGEFAGADPEDKDEYT  76
            LW+AADKLR ++DAAEYK+V LGLIFLKY+SDSFE  Y  LK  ++ +A  D ED+DEY 
Sbjct  10   LWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELK--QDPYA--DEEDQDEYL  65

Query  77   AYNIFFVPELARWNYLISKAKLPEIGKLVDDAMELIEAGNPQLKGVLPKVYARQNLDATV  136
            A NIF VP  ARW+Y+  +AK PEIG+L+D AM  IE  N  LKGVLPK YAR  LD   
Sbjct  66   AENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEK  125

Query  137  LGELIDLIGNIALGDAKARSADVLGHVFEYFLGEFALAEGKQGGQFYTPKSIVSLLVNML  196
            LG++IDL+  + LGD+ +R  DVLG+V+EYF++ FA AEGK++G+FYTP SIV LLV+M+
Sbjct  126  LGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMI  184

Query  197  EPYKGRVFDPCCGSGGMFVQSEKFVEAHQGNIDDISIYGQESNQTTWRLAKMNLAIRGIN  256
            EPYKGR++DPCCGSGGMFVQSE+FVE HQG +DDI+IYGQESN TTW+LAKMNLAIRGI+
Sbjct  185  EPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGID  244

Query  257  SEHVRWNNEGSFLNDAHKDLKSDFIIANPPFNVSDWSGEQLRGDARWQYGIPPAGNANFA  316
            ++   +N + +F ND HK+LK+D+I+ANPPFN SDW+ E+L +D RWQ+G+PP GNAN+A
Sbjct  245  NDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYA  303

Query  317  WMQHFLYHLSPKGQAGVVLAKGALTSKSSGEGDIRAALVKDANVIDCIVNLPAKLFLNTQ  376
            W++H +  L+P+G AG VLA+G++++ + +E +IR  L+ + ++++CIV LP++LF +TQ
Sbjct  304  WIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLI-EQDLVECIVTLPGQLFYSTQ  362

Query  377  IPAALWFMRRDRENSSHYRDRSKEILFIDARNLGHLINRRSKVLSDEDIKTIADTYHNWR  436
            IP  LWF+  ++ +++  ++R +EILFIDAR++GH+++R  K +SDEDI+ +A+TYH+WR
Sbjct  363  IPVCLWFISNNKGQNGK-KERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWR  421

Query  437  NKGGD-YEDVAGFCASVDINEVAKLDYVLTPGRYVGLAdeeddfdf-KERFTALKAEFEA  494
               +  YED+AGFC  V+++EV + +Y+LTPGRYVGLAD E+D +   ++   + +E+  
Sbjct  422  GTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSE  481

Query  495  QLEEEAHLNKSIAESLA  511
            Q+    +L+  I  SL 
Sbjct  482  QFAKSKELEDQIRKSLE  498

142) FNFX1_0289 in NC_017450


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  470 bits (1771),  Expect = 8e-134, Method: Compositional matrix adjust.
 Identities = 267/441 (61%), Positives = 349/441 (80%), Gaps = 11/441 (2%)

Query  11   SIEVTLWKAADKLRKNIDAAEYKHVVLGLVFLKYISDSFEERYAELQSEEWADPEDKDEY  70
            ++E  LW+AADKLR ++DAAEYK+V LGL+FLKY+SDSFEE+Y EL+ +  AD ED+DEY
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDEY  64

Query  71   LESNIFFVPTKARWSYLLANAKLPEIGKLVDEAMDEIERENNSLKGVLPKVYARDNLNST  130
            L  NIF VP  ARW Y+  NAK PEIG+L+D AM  IE+EN+SLKGVLPK YAR  L+  
Sbjct  65   LAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKE  124

Query  131  TLGELIDIIGNISIGDTQSRSADVLGHVFEYFLGEFALAEGKQGGQFYTPKSVVELLVKM  190
             LG++ID++  + +GDT+SR  DVLG+V+EYF++ FA AEGK++G+FYTP S+V LLV M
Sbjct  125  KLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEM  183

Query  191  LEPYKGRVFDPCCGSGGMFVQSEKFVESHQGQINDISIYGQESNQTTWRLCKMNLAIRGI  250
            +EPYKGR++DPCCGSGGMFVQSE+FVE HQG+++DI+IYGQESN TTW+L KMNLAIRGI
Sbjct  184  IEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGI  243

Query  251  DSSQVKWNSEGSFLNDAHKDLKADYIIANPPFNISDWSGELLRNDARWQYGTPPAGNANY  310
            D+    +N++ +F ND HK+LKADYI+ANPPFN SDW+ E L +D RWQ+G PP GNANY
Sbjct  244  DNDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANY  302

Query  311  AWIQHFLYHLAPTGVAGFVLAKGALTSNTSGEGDIRKALVEANLVDCIVNLPAKLFLNTQ  370
            AWI+H +  LAP G AGFVLA+G+++++  +E +IRK L+E +LV+CIV LP++LF +TQ
Sbjct  303  AWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQ  362

Query  371  IPASLWFIKRGR-------KTKDILFIDARNKGHLINRRTKEFSDDDITEIAQTYHNWKV  423
            IP  LWFI   +       + ++ILFIDAR+ GH+++R  KEFSD+DI  +AQTYH+W+ 
Sbjct  363  IPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRG  422

Query  424  EKD--YEDIKGFCKSASYEEV  442
             +D  YEDI GFCK  + EEV
Sbjct  423  TNDKYYEDIAGFCKVVNLEEV  443

143) Namu_1102 in NC_013235


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  469 bits (1768),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 266/524 (51%), Positives = 376/524 (72%), Gaps = 32/524 (6%)

Query  28   LKDTLWKAADKLRGSMDASQYKDVILGLVFLKYVSDAFDERREQIRAELEADGIDEDQID  87
            + + LW+AADKLRGSMDA++YK+V LGL+FLKYVSD+F+E+  +++ +  AD        
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADE-------  58

Query  88   GFLDDVDEYRGHGVFWVNRDARWSYLAQHAKGIPAVGNEPPKQVGQLIDEAMDYLMDANP  147
               +D DEY ++ +FWV ++ARW Y+ ++AK           ++GQLID AM  +   N 
Sbjct  59   ---EDQDEYLAENIFWVPKEARWQYINDNAK---------KPEIGQLIDKAMIAIEKENE  106

Query  148  SLRATLPRIYNRDNVDQRRLGELLDLFNSARFT-GQGATKARDLLGEVYEYFLEKFAKAE  206
            SL++ LP+ Y R  +D+ +LG+++DLF    F  G+  ++ +D+LG VYEYF+ KFA AE
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLFT---FKLGDTESRKQDVLGRVYEYFIAKFASAE  163

Query  207  GKRGGEFYTPASVVRVLVEVLEPTRGRVYDPCCGSGGMFVQTEKFLEAHHREGSEISVYG  266
            GK +GEFYTP+S+V++LVE++EP +GR+YDPCCGSGGMFVQ+E+F+E H+    +I++YG
Sbjct  164  GKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYG  223

Query  267  QELNERTWRMAKMNLAIHGLSGNLGPRWGDTFARDIHPDVQADYVLANPPFNIKDWARND  326
            QE N  TW++AKMNLAI+G+  +LG R +DTF  D+H +++ADY+LANPPFN  DW+++ 
Sbjct  224  QESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  327  --KDPRWKFGVPPAGNANYAWIQHIISKLAPGGSAGVVMANGSMSTQSGGEGAIRAQLVE  384
               D RW+FGVPP GNANYAWI+H+ISKLAP G+AG V+ANGSMST + +E  IR +L+E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  385  ADLVSCMVALPTQLFRSTGIPVCLWFFAKDKTVGTGGSVDRSGRVLFIDARSMGNMVDRA  444
             DLV C+V+LP QLF ST IPVCLWF++++K  G  G  +R   +LFIDAR +G+MV R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRT  401

Query  445  ERSLSDDDIGLIAGTFHAWRGTASARAAGLEYADKPGFCYSATLAEIKAADYALTPGRYV  504
             + +SD+DI  +A T+H+WRGT         Y D +GFC    L E+K  +Y LTPGRYV
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGTNDKY-----YEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  505  GAAEVEDDGEPIEEKIDRLTKQLFDQFDESERLAKVVRQRLGRL  548
            G A+VE+D EP+E+K+ R+T +L +QF  S  L   +R+ L  L
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

144) hsdM1 in NC_014145


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  469 bits (1766),  Expect = 3e-133, Method: Compositional matrix adjust.
 Identities = 271/515 (53%), Positives = 386/515 (75%), Gaps = 20/515 (3%)

Query  8    TLWAAADKLRSSMDAAEYKHIVLGLIFIKYISDAFDERREQLKTQFNDPASDLYLPDAAD  67
             LW AADKLR+SMDAAEYK++ LGLIF+KY+SD+F+E+  +LK                D
Sbjct  9    KLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELK---------------QD  53

Query  68   QAAALEERDYYTMANVFWVPEVARWETLRAQAKLWDIGIRIDQALDAIEADNPRLKGILD  127
              A  E++D Y   N+FWVP  ARW+ +  +AK  +IG  ID+A+ AIE +N  LKG+L 
Sbjct  54   PYADEEDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLP  113

Query  128  KRYGRAQLEPGKMGELVDLVSTIGFGTGTQAKDVLGEVYEYFLGQFASAEGKKGGQFYTP  187
            K Y+R+ L+  K+G+++DL +    +T ++ +DVLG VYEYF+++FASAEGK++G+FYTP
Sbjct  114  KEYARPALDKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTP  173

Query  188  ASVVKVLVEVLAPHQGKVYDPCCGSGGMFVQSEKFIESHGGRFGDISIYGQEANPTTWRL  247
            +S+VK+LVE++ P +G++YDPCCGSGGMFVQSE+F+E H GR++DI+IYGQE+NPTTW+L
Sbjct  174  SSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKL  233

Query  248  VAMNLAIRGMDFNLGKEPADTFHRDQHPDLKADYVLANPPFNISDWGGDRLLDDKRWLYG  307
              MNLAIRG+D +LG   ADTFH D H +LKADY+LANPPFN SDWG +RLLDD RW +G
Sbjct  234  AKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFG  293

Query  308  TPNPSNANYAWLQHILWHLNANGQAGVVLANGSMSSNQNNEGTIRKamveadvvevmvaL  367
             P  +NANYAW++H++  L +NG AG VLANGSMS++ ++E  IRK ++E D+VE +V+L
Sbjct  294  VPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTL  353

Query  368  PPQLFFNTQIPACLWFLTKSKTAHG-RDRRGEVLFIDARKLGRMETRVNRVFDDEDVARI  426
            P QLF++TQIP CLWF++++K  +G ++R+ E+LFIDAR +G+M +R  + F DED+ ++
Sbjct  354  PGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKV  413

Query  427  AGTVHRWRQDGEAGAQEPYADVPGFCRAVKLAEIAEHGHVLTPGRYVGAEAVddddEAFN  486
            A T H WR    +  +  Y D++GFC+ V+L E+ ++  +LTPGRYVG   V++D+E+F+
Sbjct  414  AQTYHSWR----GTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFE  469

Query  487  EKMERLTTLLAEQMAKGAELDAVIREKLGRIGYAV  521
            +KM R+T+ L+EQ AK+ EL+  IR  L  +GY+V
Sbjct  470  QKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

145) hsdM3 in NC_014145


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  469 bits (1766),  Expect = 3e-133, Method: Compositional matrix adjust.
 Identities = 271/515 (53%), Positives = 386/515 (75%), Gaps = 20/515 (3%)

Query  8    TLWAAADKLRSSMDAAEYKHIVLGLIFIKYISDAFDERREQLKTQFNDPASDLYLPDAAD  67
             LW AADKLR+SMDAAEYK++ LGLIF+KY+SD+F+E+  +LK                D
Sbjct  9    KLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELK---------------QD  53

Query  68   QAAALEERDYYTMANVFWVPEVARWETLRAQAKLWDIGIRIDQALDAIEADNPRLKGILD  127
              A  E++D Y   N+FWVP  ARW+ +  +AK  +IG  ID+A+ AIE +N  LKG+L 
Sbjct  54   PYADEEDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLP  113

Query  128  KRYGRAQLEPGKMGELVDLVSTIGFGTGTQAKDVLGEVYEYFLGQFASAEGKKGGQFYTP  187
            K Y+R+ L+  K+G+++DL +    +T ++ +DVLG VYEYF+++FASAEGK++G+FYTP
Sbjct  114  KEYARPALDKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTP  173

Query  188  ASVVKVLVEVLAPHQGKVYDPCCGSGGMFVQSEKFIESHGGRFGDISIYGQEANPTTWRL  247
            +S+VK+LVE++ P +G++YDPCCGSGGMFVQSE+F+E H GR++DI+IYGQE+NPTTW+L
Sbjct  174  SSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKL  233

Query  248  VAMNLAIRGMDFNLGKEPADTFHRDQHPDLKADYVLANPPFNISDWGGDRLLDDKRWLYG  307
              MNLAIRG+D +LG   ADTFH D H +LKADY+LANPPFN SDWG +RLLDD RW +G
Sbjct  234  AKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFG  293

Query  308  TPNPSNANYAWLQHILWHLNANGQAGVVLANGSMSSNQNNEGTIRKamveadvvevmvaL  367
             P  +NANYAW++H++  L +NG AG VLANGSMS++ ++E  IRK ++E D+VE +V+L
Sbjct  294  VPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTL  353

Query  368  PPQLFFNTQIPACLWFLTKSKTAHG-RDRRGEVLFIDARKLGRMETRVNRVFDDEDVARI  426
            P QLF++TQIP CLWF++++K  +G ++R+ E+LFIDAR +G+M +R  + F DED+ ++
Sbjct  354  PGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKV  413

Query  427  AGTVHRWRQDGEAGAQEPYADVPGFCRAVKLAEIAEHGHVLTPGRYVGAEAVddddEAFN  486
            A T H WR    +  +  Y D++GFC+ V+L E+ ++  +LTPGRYVG   V++D+E+F+
Sbjct  414  AQTYHSWR----GTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFE  469

Query  487  EKMERLTTLLAEQMAKGAELDAVIREKLGRIGYAV  521
            +KM R+T+ L+EQ AK+ EL+  IR  L  +GY+V
Sbjct  470  QKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

146) Rfer_4006 in NC_007908


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  468 bits (1764),  Expect = 4e-133, Method: Compositional matrix adjust.
 Identities = 269/461 (59%), Positives = 360/461 (79%), Gaps = 10/461 (2%)

Query  15   LEKQLWKAADKLRKNIDAAEYKHVVLGLIFLKYISDSFEELFTKLQGGAGDYAGADPEDK  74
            +E +LW+AADKLR ++DAAEYK+V LGLIFLKY+SDSFEE +  L+ ++  YA  D ED+
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDP--YA--DEEDQ  61

Query  75   DEYKAENVFFVPPQARWSFLLGKAKQPDVGSHVDAAMDAIEKENPSLKGVLPKVFARQNL  134
            DEY AEN+F VP +ARW ++ ++AK+P++G  +D AM AIEKEN SLKGVLPK +AR  L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  135  DPASLGGLIDLVGNIALGDAKARSADVLGHVFEYFLGEFALAEGKQGGQFYTPRSIVELL  194
            D   LG++IDL   + LGD+ +R  DVLG+V+EYF++ FA AEGK++G+FYTP SIV LL
Sbjct  122  DKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  195  VVMLEPYKGRVFDPCCGSGGMFVQSEKFVTEHQGRINDISIFGQESNQTTWRLAKMNLAI  254
            V M+EPYKGR++DPCCGSGGMFVQSE+FV  HQGR++DI+I+GQESN TTW+LAKMNLAI
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240

Query  255  RGIDASQVKWNNEGSFLNDAHKDVKADFIIANPPFNVSDWNGELLRKDGRWQYGVPPTGN  314
            RGID     +N + +F ND HK++KAD+I+ANPPFN SDW  E L  D RWQ+GVPP GN
Sbjct  241  RGIDNDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGN  299

Query  315  ANFAWLQHFNHHLAPNGRAGVVLAKGALTSKSSGEGDIRKAMVVDGNLIDCIVNLPAKLF  374
            AN+AW++H    LAPNG AG VLA+G++++ + +E +IRK + ++ +L++CIV LP++LF
Sbjct  300  ANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNL-IEQDLVECIVTLPGQLF  358

Query  375  LNTQIPAGLWFM--NRARNNGHPRKGEILFIDARNLGHLINRRTRELSDEDIQKVASVYH  432
             +TQIP  LWF+  N+++N    RK EILFIDAR++GH+++R  +E+SDEDIQKVA  YH
Sbjct  359  YSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYH  418

Query  433  AWRTGESEYADE-KGFCASVPLARVAELDYVLTPGRYVGLP  472
            +WR  +  Y ++  GFC  V L  V + +Y+LTPGRYVGL+
Sbjct  419  SWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLA  459

147) Mpe_A0005 in NC_008825


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  468 bits (1764),  Expect = 4e-133, Method: Compositional matrix adjust.
 Identities = 270/524 (52%), Positives = 373/524 (72%), Gaps = 35/524 (6%)

Query  8    TLWATADKLRANMDAAEYKHLVLGLIFLKYISDTFQARRTELTARFADPADEYHLDGATP  67
             LW +ADKLR++MDAAEYK++ LGLIFLKY+SD+F+ +  EL        D Y       
Sbjct  9    KLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQ------DPY-------  55

Query  68   ADIAAELEDRDYYREANVFWVPEAARWEAIRSAAKQPDIGKRIDDALSLIEAENPKLKGI  127
                A+ ED+D Y   N+FWVP  ARW+ I   AK+P+IG+ ID A+  IE EN  LKG+
Sbjct  56   ----ADEEDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGV  111

Query  128  LDKRFARAQLPDGKLGELVDLVSTIGFGESAATARDVLGQVYEYFLGMFASAEGKRGGQF  187
            L K +AR+ L   KLG+++DL  T+ +G++ +  +DVLG+VYEYF++ FASAEGK +G+F
Sbjct  112  LPKEYARPALDKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEF  170

Query  188  YTPRSIVKTLVAVLAPHHGKVYDPCCGSGGMFVQSEEFILSHGGKLGDVAIFGQEANPTT  247
            YTP SIVK LV ++ P  G++YDPCCGSGGMFVQSE F+  H G+L+D+AI+GQE+NPTT
Sbjct  171  YTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTT  230

Query  248  WRLAAMNLAIRGIDFNLGREPADTFTKNQFPDLRADFILANPPFNISDWWHASLTGDARW  307
            W+LA MNLAIRGID +LG   ADTF ++   +L+AD+ILANPPFN SDW +  L +D RW
Sbjct  231  WKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRW  290

Query  308  HYGDPPQGNANYAWLQHMLHHLKPGGRAGIVLANGSMSSSQNNEGQIRAATVEADVVEVM  367
            ++G PP+GNANYAW++HM+  L P G AG+VLANGSMS+S ++E +IR   +E D+VE +
Sbjct  291  QFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECI  350

Query  368  IALPGQLFFNTQIPACLWFLVKD-----KRQRRGEVLFIDARKLATMISRVQCELKDEVI  422
            ++LPGQLF++TQIP CLWF+ ++     K++R+ E+LFIDAR ++ M+SR   E+ DE I
Sbjct  351  VTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDI  410

Query  423  ERIAGTVAAWRASPPLPLAGGGRGEGASSYADIPGYCRSVKLAEIAEHGHVLTPGRYVGA  482
            +++A T  +W            RG     Y DI+G+C+ V+L E+ ++  +LTPGRYVG 
Sbjct  411  QKVAQTYHSW------------RGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGL  458

Query  483  EAVDDDGESFEAKMQALTEKLGEQMAKGAELDAVIRQKLGGLGY  526
              V++D E+FE KM+ +T  L+EQ AK+ EL+  IR+ L GLGY
Sbjct  459  ADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGY  502

148) FMG_1377 in NC_010376


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  468 bits (1762),  Expect = 5e-133, Method: Compositional matrix adjust.
 Identities = 293/506 (58%), Positives = 387/506 (77%), Gaps = 13/506 (2%)

Query  7    ANIGFEKQIWDAACVLWGHIPAAEYRKVIIGLIFLRYISTAFEQRYKELVEEGDGFEDDR  66
            A IGFE ++W+AA  L+G + AAEY++V +GLIFL+Y+S +FE++YKEL ++  + E+D+
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  67   DAYTMENIFFVPKEARWSTIAAAAHSPEIGTVIDSAMRAIETENKNLKNVLPKNYGSPdl  126
            D Y  ENIF VPKEARW  I   A  PEIG +ID AM AIE EN +LK VLPK+Y+ P L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  127  dkkvlgdvvdIFTNNIDMSDTEA-SEDLLGRTYEYCIAQFAEKEGVGGGEFYTPSSVVKT  185
            DK  LGD++D+FT  + ++DTE+  +D+LGR YEY IA+FA  EG  +GEFYTPSS+VK 
Sbjct  122  DKEKLGDIIDLFT--FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKL  179

Query  186  LVSILKPFENCRVYDCCCGSGGMFVQSEKFLEAHGAKRGAISVYGQEANPDTWKMAKMNM  245
            LV ++ P+   R+YD CCGSGGMFVQSE+F+E H ++ + I++YGQE+NP TWK+AKMN+
Sbjct  180  LVEMIEPYKG-RIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNL  238

Query  246  AIRGIDADFGPYNADTFSNDLHPTLKADFILANPPFNYHPWGQQALQDDKRWKYGLPPAG  305
            AIRGID D+G  NADTF NDLH  LKAD+ILANPPFN   WGQ+ L DD RW++G+PP G
Sbjct  239  AIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKG  298

Query  306  NANYAWIQHMIHHLAPNGKIGLVLANGALSTQTSGEGTIRKKIIEDDLIEGIVAMPTQLF  365
            NANYAWI+HMI  LAPNG  G+VLANG++ST   +E  IRK++IE+DL+E IV++P QLF
Sbjct  299  NANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLF  358

Query  366  YSVTIPVTLWFISKNKKQKGKT------LFIDARKMGHMVDRKHRDFDEEDIQKLADTFT  419
            YS  IPV LWFIS+NK Q+GK       LFIDAR +GHMV R  ++F +EDIQK+A+T+ 
Sbjct  359  YSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYH  418

Query  420  AFQNGT---LEDVKGFCAVASLEDIAKQDYILTPGRYVGIeeqeddgepfeeKMARLTSE  476
            + +       ED+ GFC V +LE++ +++YILTPGRYVG+ + E+D EPFE+KM R+TSE
Sbjct  419  SWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSE  478

Query  477  LSDMFEKSHELEDEIRRKLGAIGYEI  502
            LS+ F KS ELED+IR+ L ++GY +
Sbjct  479  LSEQFAKSKELEDQIRKSLEGLGYGV  504

149) CJA_3640 in NC_010995


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  467 bits (1761),  Expect = 6e-133, Method: Compositional matrix adjust.
 Identities = 285/504 (57%), Positives = 386/504 (77%), Gaps = 13/504 (2%)

Query  15   LEKQLWKAADKLRKNIDAAEYKHVVLGLIFLKYISDSFEELHIKLKKGKGDYVGADPEDK  74
            +E +LW+AADKLR ++DAAEYK+V LGLIFLKY+SDSFEE    LK++   Y  AD ED+
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDP--Y--ADEEDQ  61

Query  75   DEYKAENIFFVPRKARWSFLLGKAKQPDIGLHVDAAMDAIEKENPSLKGVLPKVYARQNL  134
            DEY AENIF VP+ ARW ++ ++AK+P+IG  +D AM AIEKEN SLKGVLPK YAR  L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  135  DPTSLGGLIDLVSNIALGDAKARSADVLGHVFEYFLGEFALAEGKQGGQFYTPRSIVELL  194
            D   LG++IDL + + LGD+ +R  DVLG+V+EYF++ FA AEGK++G+FYTP SIV LL
Sbjct  122  DKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  195  VAMLEPYKGRVFDPCCGSGGMFVQSEKFVEEHQGRVNDISIYGQESNQTTWRLAKMNLAI  254
            V M+EPYKGR++DPCCGSGGMFVQSE+FVE HQGR++DI+IYGQESN TTW+LAKMNLAI
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240

Query  255  RGIDASQVKWNNEGSFLNDAHKDVKADYIIANPPFNVSDWSGELLRTDGRWKYGPPPPLG  314
            RGID     +N + +F ND HK++KADYI+ANPPFN SDW+ E L  D RW++G PP  G
Sbjct  241  RGIDNDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPK-G  298

Query  315  NANFAWLQHFIYHLAPKGKAGVVLAKGALTSKTSGEGEIRKALIAEGNLIDCIVNLPAKL  374
            NAN+AW++H I  LAP+G AG VLA+G++++   +E EIRK LI + +L++CIV LP++L
Sbjct  299  NANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQ-DLVECIVTLPGQL  357

Query  375  FLNTQIPAALWFMNRArgssskssghprksEILFIDARNLGHLINRRTRELSHDDINKIA  434
            F +TQIP  LWF++      ++++   RK+EILFIDAR++GH+++R  +E+S++DI+K+A
Sbjct  358  FYSTQIPVCLWFISNN---KGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVA  414

Query  435  GVYHNWRTGEGE-YEDVKGFCASVSLERVAELDYVLTPGRYVGLPE-EEDDFNFAERFAA  492
              YH+WR  ++  YED+ GFC  V+LE V + +Y+LTPGRYVGL++ EED+  F ++   
Sbjct  415  QTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKR  474

Query  493  LKAEFEAQLKEEAKLNKAIAKSLA  516
            + +E+  Q+     L+  I KSL 
Sbjct  475  ITSELSEQFAKSKELEDQIRKSLE  498

150) PP1Y_AT2797 in NC_015580


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  467 bits (1761),  Expect = 9e-133, Method: Compositional matrix adjust.
 Identities = 286/527 (55%), Positives = 387/527 (74%), Gaps = 25/527 (4%)

Query  94   GDLGFEADLFKAADKLRGNLEPSEYKHIALGLIFLKYISEAFEAQHTRLSGedyadpedp  153
            + +GFE  L +AADKLRG+++++EYK++ALGLIFLKY+S++FE +   L  + YAD ED 
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  154  eeyLAANVFWVPPEARWAHLQANAKRPEITFVDVTTGREKKGDIGGLIDNAMEAIEQANI  213
            +EYLA N+FWVP EARW  ++ NAK+PEI               G LID+AM AIE+ N 
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEI---------------GQLIDKAMIAIEKEN-  105

Query  214  KVLKDVLPKNYSRPQLDKTMLGELIDLFSNVDMRGDHGQARDRLGRAYEYFISQFAGAEG  273
              LK+VLPK+Y+RP LDK  LG++IDLF+   + + +++ +D LGR YEYFI++FA+AEG
Sbjct  106  ESLKGVLPKEYARPALDKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEG  164

Query  274  RRGGEFYTPRSVVQTIVEMLEPGQGRVYDPCCGSGGMFVQSERFIEDHQGRRSDIAIYGQ  333
            + +GEFYTP S+V+ +VEM+EP +GR+YDPCCGSGGMFVQSERF+E HQGR  DIAIYGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  334  ERNHTTWRLCRMNLAVRGIDADIRWNNEGSFLRDEFAQTKFDFVMANPPFNISDWWQPQL  393
            E N TTW+L +MNLA+RGID D+   N ++F  D     K D+++ANPPFN SDW Q +L
Sbjct  225  ESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERL  284

Query  394  EGDARWSFGTPPQGNANFAWLQHILHHLAPRGTAGVVLANgsmssqqsgegeLRKALIEA  453
             +D RW FG PP+GNAN+AW++H++  LAP GTAG VLANGSMS+   +E E+RK LIE 
Sbjct  285  LDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQ  344

Query  454  DHVDCMVALPGQLFYSTQIPACLWFLARDKSANGHRDRRGEILFIDARKLGHLVDRTRRE  513
            D V+C+V+LPGQLFYSTQIP CLWF++ +K+ NG ++R+ EILFIDAR +GH+V RT +E
Sbjct  345  DLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKE  404

Query  514  FSVEDISLIADTYHRWRGKPEEVAAAGLQPYADEPGFCRSATRDEVRGHGHVLTPGRYVG  573
            FS EDI  +A+TYH WRG  +         Y D +GFC+    +EV+ +  +LTPGRYVG
Sbjct  405  FSDEDIQKVAQTYHSWRGTNDKY-------YEDIAGFCKVVNLEEVKNNEYILTPGRYVG  457

Query  574  AADLEDDGVSFEERFGGLRAKLAEQFEAGRVLEARIEAAL-GKTYAV  619
             AD+E+D  +FE++   + + L+EQF  ++ LE +I  +L G  Y+V
Sbjct  458  LADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

151) APECO78_16840 in NC_020163


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  466 bits (1757),  Expect = 1e-132, Method: Compositional matrix adjust.
 Identities = 270/497 (55%), Positives = 381/497 (77%), Gaps = 10/497 (2%)

Query  17   LWKAADKLRKNIDAAEYKHVVLGLIFLKYISDSFESHYELLKAGKGEFAGADPEDKDEYT  76
            LW+AADKLR ++DAAEYK+V LGLIFLKY+SDSFE  Y  LK +    + AD ED+DEY 
Sbjct  10   LWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQD----PYADEEDQDEYL  65

Query  77   AYNVFFVPELARWNYLISKAKLPEIGKMVDDAMELIEAGNPQLKGVLPKVYARQNLDATV  136
            A N+F VP  ARW+Y+  +AK PEIG+++D AM  IE  N  LKGVLPK YAR  LD   
Sbjct  66   AENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEK  125

Query  137  LGELIDLIGNIALGDAKARSADVLGHVFEYFLGEFALAEGKQGGQFYTPKSIVSLLVNML  196
            LG++IDL+  + LGD+ +R  DVLG+V+EYF++ FA AEGK++G+FYTP SIV LLV+M+
Sbjct  126  LGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMI  184

Query  197  EPYKGRVFDPCCGSGGMFVQSEKFVEAHQGNIDDISIYGQESNQTTWRLAKMNLAIRGIN  256
            EPYKGR++DPCCGSGGMFVQSE+FVE HQG +DDI+IYGQESN TTW+LAKMNLAIRGI+
Sbjct  185  EPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGID  244

Query  257  SEHVRWNNEGSFLNDAHKDLKSDFIIANPPFNVSDWSGEQLRGDARWQYGIPPAGNANFA  316
            ++   +N + +F ND HK+LK+D+I+ANPPFN SDW+ E+L +D RWQ+G+PP GNAN+A
Sbjct  245  NDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYA  303

Query  317  WMQHFLYHLSPKGQAGVVLAKGALTSKSSGEGDIRAALVKDANVIDCIVNLPAKLFLNTQ  376
            W++H +  L+P+G AG VLA+G++++ + +E +IR  L+ + ++++CIV LP++LF +TQ
Sbjct  304  WIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLI-EQDLVECIVTLPGQLFYSTQ  362

Query  377  IPAALWFMRRDRHNSNQYRDRSKEILFIDARNLGHLINRRTKVLSDDDIKTIADTYHNWR  436
            IP  LWF+  ++ ++ + ++R +EILFIDAR++GH+++R  K +SD+DI+ +A+TYH+WR
Sbjct  363  IPVCLWFISNNKGQNGK-KERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWR  421

Query  437  NKGGD-YEDVAGFCASVDIAEVAKLDYVLTPGRYVGLAdeeddfdf-KERFTALKAEFEA  494
               +  YED+AGFC  V++ EV + +Y+LTPGRYVGLAD E+D +   ++   + +E+  
Sbjct  422  GTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSE  481

Query  495  QLEEEARLNRAIVDNLA  511
            Q+     L+  I  +L 
Sbjct  482  QFAKSKELEDQIRKSLE  498

152) Nit79A3_0882 in NC_015731


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  466 bits (1756),  Expect = 2e-132, Method: Compositional matrix adjust.
 Identities = 279/467 (60%), Positives = 363/467 (78%), Gaps = 16/467 (3%)

Query  13   LEKQLWKAADKLRKNIDAAEYKHVVLGLIFLKYISDSFEEHFAKLQAGFGDYAGSDPEDK  72
            +E +LW+AADKLR ++DAAEYK+V LGLIFLKY+SDSFEE +  L+ +   YA  D ED+
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQD--PYA--DEEDQ  61

Query  73   DEYKAENIFYVPPESRWPHLVAQAKQPDIGKFADAAMDAIEKENPSLKGVLPKVFARQNL  132
            DEY AENIF VP E+RW  +  +AK+P+IG++ D AM AIEKEN SLKGVLPK +AR  L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  133  DPASLGGLIDLVGNIALGDAKSRSADVLGHVFEYFLGEFALAEGKQGGQFYTPRSIVELL  192
            D   LG++IDL   + LGD+ SR  DVLG+V+EYF++ FA AEGK++G+FYTP SIV LL
Sbjct  122  DKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  193  VMMLEPYKGRVFDPCCGSGGMFVQSEKFVEEHQGRINDISIYGQESNQTTWRLAKMNLAI  252
            V M+EPYKGR++DPCCGSGGMFVQSE+FVE HQGR++DI+IYGQESN TTW+LAKMNLAI
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240

Query  253  RGIDSSQVKWNNEGSFLNDAHKDLKADFIIANPPFNVSDWSGELLRNDGRWQFGTPPAGN  312
            RGID+    +N + +F ND HK+LKAD+I+ANPPFN SDW+ E L +D RWQFG PP GN
Sbjct  241  RGIDNDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGN  299

Query  313  ANFAWLQHFAYHLSPAGIAGVVLAKGALTSKTSGEGEIRKNLIAEGNLIDCIVNLPGKLF  372
            AN+AW++H    L+P G AG VLA+G++++   +E EIRKNLI + +L++CIV LPG+LF
Sbjct  300  ANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQ-DLVECIVTLPGQLF  358

Query  373  LNTQIPAGLWFM--NRARNNGHPRKDQILFIDARNLGHLINRRTLELSREDIQKIASTYH  430
             +TQIP  LWF+  N+++N    RK++ILFIDAR++GH+++R   E+S EDIQK+A TYH
Sbjct  359  YSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYH  418

Query  431  AWRNASVIPAQAGIQPYEDIKGFCASVPVERVVELDYVLTPGRYVGL  477
            +WR ++        + YEDI GFC  V +E V + +Y+LTPGRYVGL
Sbjct  419  SWRGTND-------KYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGL  458

153) hsdM in NC_022362


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  464 bits (1749),  Expect = 5e-132, Method: Compositional matrix adjust.
 Identities = 272/499 (55%), Positives = 378/499 (76%), Gaps = 12/499 (2%)

Query  7    IKLEDALWKSADKLRKNIDAAEYKHIVLGLIFLRYISDSFMQKYEELLKEQDDGADPEDA  66
            I +E+ LW++ADKLR ++DAAEYK++ LGLIFL+Y+SDSF +KY EL   QD  AD ED 
Sbjct  4    IGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKEL--KQDPYADEEDQ  61

Query  67   DEYLADNIFFVPEKSRYNYIRDNAKNPKIGKMLDEAMDEIEKHNDTLKGVLPKVYAKDNL  126
            DEYLA+NIF VP  +R +YI DNAK+P IG+++D AM  IEK+N++LKGVLPK YA+  L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  127  DSKCLGELIDLIG-NIAFDTGKSTDVLGHVFEYFLGEFALAEGKQGGQFYTPKCVVELLV  185
            D   LG++IDL+  +++   ++  DVLG+V+EYF++ FA AEGK++G+FYTP  +V LLV
Sbjct  122  DKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  186  TMLEPYKGRVFDPCCGSGGMFVQSEEFVKSHQGRLDDISIYGQESNQTTYKLAKMNLAIR  245
             M+EPYKGR++DPCCGSGGMFVQSE FV  HQGRLDDI+IYGQESN TT KLAKMNLAIR
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  246  KIESSQVIWNNEGSFLNDAHKDLKADFIIANPPFNDSDWSGELLENDGRWKYGVPPASNA  305
             I++    +N + +F ND HK+LKAD+I+ANPPFN SDW+ E L +D RW++GVPP +NA
Sbjct  242  GIDNDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNA  300

Query  306  NYAWIQHFLYHLSPNGGVAGFVLAKGALTSNTTNEAAIRKALIEDDLIDCIVNLPAKLFL  365
            NYAWI+H +  L+PN G AGFVLA+G+++++  +E  IRK LIE+DL++CIV LP++LF 
Sbjct  301  NYAWIEHMISKLAPN-GTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFY  359

Query  366  NTGIPASLWFIRRQKLPKTVK----KTLFIDARDLGTRINRRNKTLNKDDINQIANIYKA  421
            +T IP  LWFI  +K  +  K      LFIDAR++G  ++R  K ++ +DI+++A+ Y +
Sbjct  360  STQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHS  419

Query  422  WKNGTD--YEDIKGFCKSVSIDEIRELSYVLTPGRYVGLADSDDEFD-FDTRFNELLAKL  478
            W+   D  YEDI GFCK V+++E+++  Y+LTPGRYVGLAD +++ + F+ + + + + L
Sbjct  420  WRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSEL  479

Query  479  KSQIKTEQELSEIILKNLE  497
              Q+   +EL + I K+LE
Sbjct  480  SEQFAKSKELEDQIRKSLE  498

154) hsdM in NC_022352


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  464 bits (1749),  Expect = 5e-132, Method: Compositional matrix adjust.
 Identities = 272/499 (55%), Positives = 378/499 (76%), Gaps = 12/499 (2%)

Query  7    IKLEDALWKSADKLRKNIDAAEYKHIVLGLIFLRYISDSFMQKYEELLKEQDDGADPEDA  66
            I +E+ LW++ADKLR ++DAAEYK++ LGLIFL+Y+SDSF +KY EL   QD  AD ED 
Sbjct  4    IGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKEL--KQDPYADEEDQ  61

Query  67   DEYLADNIFFVPEKSRYNYIRDNAKNPKIGKMLDEAMDEIEKHNDTLKGVLPKVYAKDNL  126
            DEYLA+NIF VP  +R +YI DNAK+P IG+++D AM  IEK+N++LKGVLPK YA+  L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  127  DSKCLGELIDLIG-NIAFDTGKSTDVLGHVFEYFLGEFALAEGKQGGQFYTPKCVVELLV  185
            D   LG++IDL+  +++   ++  DVLG+V+EYF++ FA AEGK++G+FYTP  +V LLV
Sbjct  122  DKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  186  TMLEPYKGRVFDPCCGSGGMFVQSEEFVKSHQGRLDDISIYGQESNQTTYKLAKMNLAIR  245
             M+EPYKGR++DPCCGSGGMFVQSE FV  HQGRLDDI+IYGQESN TT KLAKMNLAIR
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  246  KIESSQVIWNNEGSFLNDAHKDLKADFIIANPPFNDSDWSGELLENDGRWKYGVPPASNA  305
             I++    +N + +F ND HK+LKAD+I+ANPPFN SDW+ E L +D RW++GVPP +NA
Sbjct  242  GIDNDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNA  300

Query  306  NYAWIQHFLYHLSPNGGVAGFVLAKGALTSNTTNEAAIRKALIEDDLIDCIVNLPAKLFL  365
            NYAWI+H +  L+PN G AGFVLA+G+++++  +E  IRK LIE+DL++CIV LP++LF 
Sbjct  301  NYAWIEHMISKLAPN-GTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFY  359

Query  366  NTGIPASLWFIRRQKLPKTVK----KTLFIDARDLGTRINRRNKTLNKDDINQIANIYKA  421
            +T IP  LWFI  +K  +  K      LFIDAR++G  ++R  K ++ +DI+++A+ Y +
Sbjct  360  STQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHS  419

Query  422  WKNGTD--YEDIKGFCKSVSIDEIRELSYVLTPGRYVGLADSDDEFD-FDTRFNELLAKL  478
            W+   D  YEDI GFCK V+++E+++  Y+LTPGRYVGLAD +++ + F+ + + + + L
Sbjct  420  WRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSEL  479

Query  479  KSQIKTEQELSEIILKNLE  497
              Q+   +EL + I K+LE
Sbjct  480  SEQFAKSKELEDQIRKSLE  498

155) hsdM in NC_022351


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  464 bits (1749),  Expect = 5e-132, Method: Compositional matrix adjust.
 Identities = 272/499 (55%), Positives = 378/499 (76%), Gaps = 12/499 (2%)

Query  7    IKLEDALWKSADKLRKNIDAAEYKHIVLGLIFLRYISDSFMQKYEELLKEQDDGADPEDA  66
            I +E+ LW++ADKLR ++DAAEYK++ LGLIFL+Y+SDSF +KY EL   QD  AD ED 
Sbjct  4    IGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKEL--KQDPYADEEDQ  61

Query  67   DEYLADNIFFVPEKSRYNYIRDNAKNPKIGKMLDEAMDEIEKHNDTLKGVLPKVYAKDNL  126
            DEYLA+NIF VP  +R +YI DNAK+P IG+++D AM  IEK+N++LKGVLPK YA+  L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  127  DSKCLGELIDLIG-NIAFDTGKSTDVLGHVFEYFLGEFALAEGKQGGQFYTPKCVVELLV  185
            D   LG++IDL+  +++   ++  DVLG+V+EYF++ FA AEGK++G+FYTP  +V LLV
Sbjct  122  DKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  186  TMLEPYKGRVFDPCCGSGGMFVQSEEFVKSHQGRLDDISIYGQESNQTTYKLAKMNLAIR  245
             M+EPYKGR++DPCCGSGGMFVQSE FV  HQGRLDDI+IYGQESN TT KLAKMNLAIR
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  246  KIESSQVIWNNEGSFLNDAHKDLKADFIIANPPFNDSDWSGELLENDGRWKYGVPPASNA  305
             I++    +N + +F ND HK+LKAD+I+ANPPFN SDW+ E L +D RW++GVPP +NA
Sbjct  242  GIDNDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNA  300

Query  306  NYAWIQHFLYHLSPNGGVAGFVLAKGALTSNTTNEAAIRKALIEDDLIDCIVNLPAKLFL  365
            NYAWI+H +  L+PN G AGFVLA+G+++++  +E  IRK LIE+DL++CIV LP++LF 
Sbjct  301  NYAWIEHMISKLAPN-GTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFY  359

Query  366  NTGIPASLWFIRRQKLPKTVK----KTLFIDARDLGTRINRRNKTLNKDDINQIANIYKA  421
            +T IP  LWFI  +K  +  K      LFIDAR++G  ++R  K ++ +DI+++A+ Y +
Sbjct  360  STQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHS  419

Query  422  WKNGTD--YEDIKGFCKSVSIDEIRELSYVLTPGRYVGLADSDDEFD-FDTRFNELLAKL  478
            W+   D  YEDI GFCK V+++E+++  Y+LTPGRYVGLAD +++ + F+ + + + + L
Sbjct  420  WRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSEL  479

Query  479  KSQIKTEQELSEIILKNLE  497
              Q+   +EL + I K+LE
Sbjct  480  SEQFAKSKELEDQIRKSLE  498

156) hsdM in NC_022353


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  464 bits (1749),  Expect = 5e-132, Method: Compositional matrix adjust.
 Identities = 272/499 (55%), Positives = 378/499 (76%), Gaps = 12/499 (2%)

Query  7    IKLEDALWKSADKLRKNIDAAEYKHIVLGLIFLRYISDSFMQKYEELLKEQDDGADPEDA  66
            I +E+ LW++ADKLR ++DAAEYK++ LGLIFL+Y+SDSF +KY EL   QD  AD ED 
Sbjct  4    IGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKEL--KQDPYADEEDQ  61

Query  67   DEYLADNIFFVPEKSRYNYIRDNAKNPKIGKMLDEAMDEIEKHNDTLKGVLPKVYAKDNL  126
            DEYLA+NIF VP  +R +YI DNAK+P IG+++D AM  IEK+N++LKGVLPK YA+  L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  127  DSKCLGELIDLIG-NIAFDTGKSTDVLGHVFEYFLGEFALAEGKQGGQFYTPKCVVELLV  185
            D   LG++IDL+  +++   ++  DVLG+V+EYF++ FA AEGK++G+FYTP  +V LLV
Sbjct  122  DKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  186  TMLEPYKGRVFDPCCGSGGMFVQSEEFVKSHQGRLDDISIYGQESNQTTYKLAKMNLAIR  245
             M+EPYKGR++DPCCGSGGMFVQSE FV  HQGRLDDI+IYGQESN TT KLAKMNLAIR
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  246  KIESSQVIWNNEGSFLNDAHKDLKADFIIANPPFNDSDWSGELLENDGRWKYGVPPASNA  305
             I++    +N + +F ND HK+LKAD+I+ANPPFN SDW+ E L +D RW++GVPP +NA
Sbjct  242  GIDNDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNA  300

Query  306  NYAWIQHFLYHLSPNGGVAGFVLAKGALTSNTTNEAAIRKALIEDDLIDCIVNLPAKLFL  365
            NYAWI+H +  L+PN G AGFVLA+G+++++  +E  IRK LIE+DL++CIV LP++LF 
Sbjct  301  NYAWIEHMISKLAPN-GTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFY  359

Query  366  NTGIPASLWFIRRQKLPKTVK----KTLFIDARDLGTRINRRNKTLNKDDINQIANIYKA  421
            +T IP  LWFI  +K  +  K      LFIDAR++G  ++R  K ++ +DI+++A+ Y +
Sbjct  360  STQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHS  419

Query  422  WKNGTD--YEDIKGFCKSVSIDEIRELSYVLTPGRYVGLADSDDEFD-FDTRFNELLAKL  478
            W+   D  YEDI GFCK V+++E+++  Y+LTPGRYVGLAD +++ + F+ + + + + L
Sbjct  420  WRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSEL  479

Query  479  KSQIKTEQELSEIILKNLE  497
              Q+   +EL + I K+LE
Sbjct  480  SEQFAKSKELEDQIRKSLE  498

157) CJJ81176_1539 in NC_008787


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  464 bits (1749),  Expect = 5e-132, Method: Compositional matrix adjust.
 Identities = 272/499 (55%), Positives = 378/499 (76%), Gaps = 12/499 (2%)

Query  7    IKLEDALWKSADKLRKNIDAAEYKHIVLGLIFLRYISDSFMQKYEELLKEQDDGADPEDA  66
            I +E+ LW++ADKLR ++DAAEYK++ LGLIFL+Y+SDSF +KY EL   QD  AD ED 
Sbjct  4    IGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKEL--KQDPYADEEDQ  61

Query  67   DEYLADNIFFVPEKSRYNYIRDNAKNPKIGKMLDEAMDEIEKHNDTLKGVLPKVYAKDNL  126
            DEYLA+NIF VP  +R +YI DNAK+P IG+++D AM  IEK+N++LKGVLPK YA+  L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  127  DSKCLGELIDLIG-NIAFDTGKSTDVLGHVFEYFLGEFALAEGKQGGQFYTPKCVVELLV  185
            D   LG++IDL+  +++   ++  DVLG+V+EYF++ FA AEGK++G+FYTP  +V LLV
Sbjct  122  DKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  186  TMLEPYKGRVFDPCCGSGGMFVQSEEFVKSHQGRLDDISIYGQESNQTTYKLAKMNLAIR  245
             M+EPYKGR++DPCCGSGGMFVQSE FV  HQGRLDDI+IYGQESN TT KLAKMNLAIR
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  246  KIESSQVIWNNEGSFLNDAHKDLKADFIIANPPFNDSDWSGELLENDGRWKYGVPPASNA  305
             I++    +N + +F ND HK+LKAD+I+ANPPFN SDW+ E L +D RW++GVPP +NA
Sbjct  242  GIDNDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNA  300

Query  306  NYAWIQHFLYHLSPNGGVAGFVLAKGALTSNTTNEAAIRKALIEDDLIDCIVNLPAKLFL  365
            NYAWI+H +  L+PN G AGFVLA+G+++++  +E  IRK LIE+DL++CIV LP++LF 
Sbjct  301  NYAWIEHMISKLAPN-GTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFY  359

Query  366  NTGIPASLWFIRRQKLPKTVK----KTLFIDARDLGTRINRRNKTLNKDDINQIANIYKA  421
            +T IP  LWFI  +K  +  K      LFIDAR++G  ++R  K ++ +DI+++A+ Y +
Sbjct  360  STQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHS  419

Query  422  WKNGTD--YEDIKGFCKSVSIDEIRELSYVLTPGRYVGLADSDDEFD-FDTRFNELLAKL  478
            W+   D  YEDI GFCK V+++E+++  Y+LTPGRYVGLAD +++ + F+ + + + + L
Sbjct  420  WRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSEL  479

Query  479  KSQIKTEQELSEIILKNLE  497
              Q+   +EL + I K+LE
Sbjct  480  SEQFAKSKELEDQIRKSLE  498

158) hsdM in NC_017279


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  464 bits (1749),  Expect = 5e-132, Method: Compositional matrix adjust.
 Identities = 272/499 (55%), Positives = 378/499 (76%), Gaps = 12/499 (2%)

Query  7    IKLEDALWKSADKLRKNIDAAEYKHIVLGLIFLRYISDSFMQKYEELLKEQDDGADPEDA  66
            I +E+ LW++ADKLR ++DAAEYK++ LGLIFL+Y+SDSF +KY EL   QD  AD ED 
Sbjct  4    IGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKEL--KQDPYADEEDQ  61

Query  67   DEYLADNIFFVPEKSRYNYIRDNAKNPKIGKMLDEAMDEIEKHNDTLKGVLPKVYAKDNL  126
            DEYLA+NIF VP  +R +YI DNAK+P IG+++D AM  IEK+N++LKGVLPK YA+  L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  127  DSKCLGELIDLIG-NIAFDTGKSTDVLGHVFEYFLGEFALAEGKQGGQFYTPKCVVELLV  185
            D   LG++IDL+  +++   ++  DVLG+V+EYF++ FA AEGK++G+FYTP  +V LLV
Sbjct  122  DKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  186  TMLEPYKGRVFDPCCGSGGMFVQSEEFVKSHQGRLDDISIYGQESNQTTYKLAKMNLAIR  245
             M+EPYKGR++DPCCGSGGMFVQSE FV  HQGRLDDI+IYGQESN TT KLAKMNLAIR
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  246  KIESSQVIWNNEGSFLNDAHKDLKADFIIANPPFNDSDWSGELLENDGRWKYGVPPASNA  305
             I++    +N + +F ND HK+LKAD+I+ANPPFN SDW+ E L +D RW++GVPP +NA
Sbjct  242  GIDNDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNA  300

Query  306  NYAWIQHFLYHLSPNGGVAGFVLAKGALTSNTTNEAAIRKALIEDDLIDCIVNLPAKLFL  365
            NYAWI+H +  L+PN G AGFVLA+G+++++  +E  IRK LIE+DL++CIV LP++LF 
Sbjct  301  NYAWIEHMISKLAPN-GTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFY  359

Query  366  NTGIPASLWFIRRQKLPKTVK----KTLFIDARDLGTRINRRNKTLNKDDINQIANIYKA  421
            +T IP  LWFI  +K  +  K      LFIDAR++G  ++R  K ++ +DI+++A+ Y +
Sbjct  360  STQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHS  419

Query  422  WKNGTD--YEDIKGFCKSVSIDEIRELSYVLTPGRYVGLADSDDEFD-FDTRFNELLAKL  478
            W+   D  YEDI GFCK V+++E+++  Y+LTPGRYVGLAD +++ + F+ + + + + L
Sbjct  420  WRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSEL  479

Query  479  KSQIKTEQELSEIILKNLE  497
              Q+   +EL + I K+LE
Sbjct  480  SEQFAKSKELEDQIRKSLE  498

159) hsdM in NC_002163


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  464 bits (1749),  Expect = 5e-132, Method: Compositional matrix adjust.
 Identities = 272/499 (55%), Positives = 378/499 (76%), Gaps = 12/499 (2%)

Query  7    IKLEDALWKSADKLRKNIDAAEYKHIVLGLIFLRYISDSFMQKYEELLKEQDDGADPEDA  66
            I +E+ LW++ADKLR ++DAAEYK++ LGLIFL+Y+SDSF +KY EL   QD  AD ED 
Sbjct  4    IGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKEL--KQDPYADEEDQ  61

Query  67   DEYLADNIFFVPEKSRYNYIRDNAKNPKIGKMLDEAMDEIEKHNDTLKGVLPKVYAKDNL  126
            DEYLA+NIF VP  +R +YI DNAK+P IG+++D AM  IEK+N++LKGVLPK YA+  L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  127  DSKCLGELIDLIG-NIAFDTGKSTDVLGHVFEYFLGEFALAEGKQGGQFYTPKCVVELLV  185
            D   LG++IDL+  +++   ++  DVLG+V+EYF++ FA AEGK++G+FYTP  +V LLV
Sbjct  122  DKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  186  TMLEPYKGRVFDPCCGSGGMFVQSEEFVKSHQGRLDDISIYGQESNQTTYKLAKMNLAIR  245
             M+EPYKGR++DPCCGSGGMFVQSE FV  HQGRLDDI+IYGQESN TT KLAKMNLAIR
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  246  KIESSQVIWNNEGSFLNDAHKDLKADFIIANPPFNDSDWSGELLENDGRWKYGVPPASNA  305
             I++    +N + +F ND HK+LKAD+I+ANPPFN SDW+ E L +D RW++GVPP +NA
Sbjct  242  GIDNDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNA  300

Query  306  NYAWIQHFLYHLSPNGGVAGFVLAKGALTSNTTNEAAIRKALIEDDLIDCIVNLPAKLFL  365
            NYAWI+H +  L+PN G AGFVLA+G+++++  +E  IRK LIE+DL++CIV LP++LF 
Sbjct  301  NYAWIEHMISKLAPN-GTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFY  359

Query  366  NTGIPASLWFIRRQKLPKTVK----KTLFIDARDLGTRINRRNKTLNKDDINQIANIYKA  421
            +T IP  LWFI  +K  +  K      LFIDAR++G  ++R  K ++ +DI+++A+ Y +
Sbjct  360  STQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHS  419

Query  422  WKNGTD--YEDIKGFCKSVSIDEIRELSYVLTPGRYVGLADSDDEFD-FDTRFNELLAKL  478
            W+   D  YEDI GFCK V+++E+++  Y+LTPGRYVGLAD +++ + F+ + + + + L
Sbjct  420  WRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSEL  479

Query  479  KSQIKTEQELSEIILKNLE  497
              Q+   +EL + I K+LE
Sbjct  480  SEQFAKSKELEDQIRKSLE  498

160) hsdM in NC_018521


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  464 bits (1749),  Expect = 5e-132, Method: Compositional matrix adjust.
 Identities = 272/499 (55%), Positives = 378/499 (76%), Gaps = 12/499 (2%)

Query  7    IKLEDALWKSADKLRKNIDAAEYKHIVLGLIFLRYISDSFMQKYEELLKEQDDGADPEDA  66
            I +E+ LW++ADKLR ++DAAEYK++ LGLIFL+Y+SDSF +KY EL   QD  AD ED 
Sbjct  4    IGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKEL--KQDPYADEEDQ  61

Query  67   DEYLADNIFFVPEKSRYNYIRDNAKNPKIGKMLDEAMDEIEKHNDTLKGVLPKVYAKDNL  126
            DEYLA+NIF VP  +R +YI DNAK+P IG+++D AM  IEK+N++LKGVLPK YA+  L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  127  DSKCLGELIDLIG-NIAFDTGKSTDVLGHVFEYFLGEFALAEGKQGGQFYTPKCVVELLV  185
            D   LG++IDL+  +++   ++  DVLG+V+EYF++ FA AEGK++G+FYTP  +V LLV
Sbjct  122  DKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  186  TMLEPYKGRVFDPCCGSGGMFVQSEEFVKSHQGRLDDISIYGQESNQTTYKLAKMNLAIR  245
             M+EPYKGR++DPCCGSGGMFVQSE FV  HQGRLDDI+IYGQESN TT KLAKMNLAIR
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  246  KIESSQVIWNNEGSFLNDAHKDLKADFIIANPPFNDSDWSGELLENDGRWKYGVPPASNA  305
             I++    +N + +F ND HK+LKAD+I+ANPPFN SDW+ E L +D RW++GVPP +NA
Sbjct  242  GIDNDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNA  300

Query  306  NYAWIQHFLYHLSPNGGVAGFVLAKGALTSNTTNEAAIRKALIEDDLIDCIVNLPAKLFL  365
            NYAWI+H +  L+PN G AGFVLA+G+++++  +E  IRK LIE+DL++CIV LP++LF 
Sbjct  301  NYAWIEHMISKLAPN-GTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFY  359

Query  366  NTGIPASLWFIRRQKLPKTVK----KTLFIDARDLGTRINRRNKTLNKDDINQIANIYKA  421
            +T IP  LWFI  +K  +  K      LFIDAR++G  ++R  K ++ +DI+++A+ Y +
Sbjct  360  STQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHS  419

Query  422  WKNGTD--YEDIKGFCKSVSIDEIRELSYVLTPGRYVGLADSDDEFD-FDTRFNELLAKL  478
            W+   D  YEDI GFCK V+++E+++  Y+LTPGRYVGLAD +++ + F+ + + + + L
Sbjct  420  WRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSEL  479

Query  479  KSQIKTEQELSEIILKNLE  497
              Q+   +EL + I K+LE
Sbjct  480  SEQFAKSKELEDQIRKSLE  498

161) A911_07480 in NC_018709


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  464 bits (1749),  Expect = 5e-132, Method: Compositional matrix adjust.
 Identities = 272/499 (55%), Positives = 378/499 (76%), Gaps = 12/499 (2%)

Query  7    IKLEDALWKSADKLRKNIDAAEYKHIVLGLIFLRYISDSFMQKYEELLKEQDDGADPEDA  66
            I +E+ LW++ADKLR ++DAAEYK++ LGLIFL+Y+SDSF +KY EL   QD  AD ED 
Sbjct  4    IGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKEL--KQDPYADEEDQ  61

Query  67   DEYLADNIFFVPEKSRYNYIRDNAKNPKIGKMLDEAMDEIEKHNDTLKGVLPKVYAKDNL  126
            DEYLA+NIF VP  +R +YI DNAK+P IG+++D AM  IEK+N++LKGVLPK YA+  L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  127  DSKCLGELIDLIG-NIAFDTGKSTDVLGHVFEYFLGEFALAEGKQGGQFYTPKCVVELLV  185
            D   LG++IDL+  +++   ++  DVLG+V+EYF++ FA AEGK++G+FYTP  +V LLV
Sbjct  122  DKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  186  TMLEPYKGRVFDPCCGSGGMFVQSEEFVKSHQGRLDDISIYGQESNQTTYKLAKMNLAIR  245
             M+EPYKGR++DPCCGSGGMFVQSE FV  HQGRLDDI+IYGQESN TT KLAKMNLAIR
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  246  KIESSQVIWNNEGSFLNDAHKDLKADFIIANPPFNDSDWSGELLENDGRWKYGVPPASNA  305
             I++    +N + +F ND HK+LKAD+I+ANPPFN SDW+ E L +D RW++GVPP +NA
Sbjct  242  GIDNDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNA  300

Query  306  NYAWIQHFLYHLSPNGGVAGFVLAKGALTSNTTNEAAIRKALIEDDLIDCIVNLPAKLFL  365
            NYAWI+H +  L+PN G AGFVLA+G+++++  +E  IRK LIE+DL++CIV LP++LF 
Sbjct  301  NYAWIEHMISKLAPN-GTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFY  359

Query  366  NTGIPASLWFIRRQKLPKTVK----KTLFIDARDLGTRINRRNKTLNKDDINQIANIYKA  421
            +T IP  LWFI  +K  +  K      LFIDAR++G  ++R  K ++ +DI+++A+ Y +
Sbjct  360  STQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHS  419

Query  422  WKNGTD--YEDIKGFCKSVSIDEIRELSYVLTPGRYVGLADSDDEFD-FDTRFNELLAKL  478
            W+   D  YEDI GFCK V+++E+++  Y+LTPGRYVGLAD +++ + F+ + + + + L
Sbjct  420  WRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSEL  479

Query  479  KSQIKTEQELSEIILKNLE  497
              Q+   +EL + I K+LE
Sbjct  480  SEQFAKSKELEDQIRKSLE  498

162) Arth_0988 in NC_008541


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  464 bits (1750),  Expect = 5e-132, Method: Compositional matrix adjust.
 Identities = 267/515 (52%), Positives = 393/515 (77%), Gaps = 20/515 (3%)

Query  12   LEQRLWDTADALRGNQEPSEYKHVVLGLVFLKYISDRFEERRRAIETSLSDPNSEEYIPN  71
            +E++LW++AD LRG+ +++EYK+V LGL+FLKY+SD FEE+ + +     DP ++E    
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELK---QDPYADE----  58

Query  72   EARRSEFLEDRDEYASHNVFWVPELARWGYLQDNAKLPKIGQQLDQAMDLIEKENPIIRG  131
                    ED+DEY ++N+FWVP  ARW Y++DNAK P IGQ +D+AM  IEKEN  ++G
Sbjct  59   --------EDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKG  110

Query  132  VLPRNYGREGLDKSRLGQLVDLIGSIGFTESDDHGSDDVLGRVYEYFLGQFAGKETGKDA  191
            VLP++Y+R +LDK +LG+++DL+ ++ + +++ +  +DVLGRVYEYF+++FA+ E GK+A
Sbjct  111  VLPKEYARPALDKEKLGDIIDLF-TFKLGDTESR-KQDVLGRVYEYFIAKFASAE-GKNA  167

Query  192  GAFYTPRSVVKTLVEMLEPFHGRVYDPACGSGGMFVQSAEFVTAHGGERTDISVYGQEFT  251
            G FYTP S+VK LVEM+EP+ GR+YDP CGSGGMFVQS  FV  H G   DI++YGQE  
Sbjct  168  GEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESN  227

Query  252  DTTWKLAKMNLALRGIEADLGDRSADSFTQDLHRDLRADFIIANPPFNVSNWWNAKLADD  311
             TTWKLAKMNLA+RGI+ DLG+R+AD+F +DLH++L+AD+I+ANPPFN S+W + +L DD
Sbjct  228  PTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDD  287

Query  312  PRWKYGTPPEGNANFAWVQHFLHHLSPKGTAGFVlsngslsskssgegeIRRKLVEADLV  371
             RW++G PP GNAN+AW++H +  L+P+GTAGFVL+NGS+S+ + +E EIR++L+E DLV
Sbjct  288  YRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLV  347

Query  372  DCIVAMPDKLFFNTGIPVSLWFISKERHGNGHRARQGEVLFIDASKLGRMENrrlrvldd  431
            +CIV++P++LF++T IPV LWFIS+++  NG + R+ E+LFIDA  +G+M + R      
Sbjct  348  ECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVS-RTLKEFS  406

Query  432  drdIAKIAGAYHAWRNHDGG-YEDVPGFVVAATLEEIRQHDFVLTPGRYVGTKEAEADWE  490
            D DI K+A +YH+WR  ++  YED++GF     LEE+++++++LTPGRYVG  + E D E
Sbjct  407  DEDIQKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEE  466

Query  491  PVEDKIARLTGELYAEFERGRKLEEVVRERLGGLN  525
            P E+K+ R+T+EL  +F +++ LE+ +R  L GL 
Sbjct  467  PFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLG  501

163) HMPREF0389_01041 in NC_016630


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  463 bits (1746),  Expect = 1e-131, Method: Compositional matrix adjust.
 Identities = 284/514 (56%), Positives = 391/514 (77%), Gaps = 21/514 (4%)

Query  7    ANIGFEKQIWDAACVLWGHIPAAEYRKVIVGLIFLRYISSAFEKRYEELLKEGDGFENDR  66
            A IGFE ++W+AA  L+G + AAEY++V +GLIFL+Y+S +FE +Y EL ++  + E+D+
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  67   DAYAEENIFFVPKEARWSKISSAAHTPEIGTVIDDAMRAIEKENITLKNVLPKNYASPDL  126
            D Y  ENIF VPKEARW  I+  A  PEIG +ID AM AIEKEN +LK VLPK+YA P L
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPAL  121

Query  127  DKRVLGEVVDLFTNEVKMDGTEASK-DLLGRTYEYCIAQFAAYEGTKGGEFYTPSSIVKT  185
            DK  LG+++DLFT   K+++TE+ K D+LGR YEY IA+FA+ EG ++GEFYTPSSIVK 
Sbjct  122  DKEKLGDIIDLFT--FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKL  179

Query  186  IVAILKPFNNCRVYDPCCGSGGMFVQSEKFVQAHSDNRGNISVYGQESNADTWKMAKMNM  245
            +V ++ P++  R+YDPCCGSGGMFVQSE+FV+ H +  ++I++YGQESN+ TWK+AKMN+
Sbjct  180  LVEMIEPYKG-RIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNL  238

Query  246  AIRGIDANFGSYHADTFFNDIHKTLKSDFIMANPPFNLSNWGADKLKEDVRWKYGTPPSG  305
            AIRGID ++G  +ADTF ND+HK LK+D+I+ANPPFN S+WG ++L +D RW++G PP G
Sbjct  239  AIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKG  298

Query  306  NANYAWIQHMIHHLAANGKIGLVLANGALSSQSSGEGEIRKKIIEDDLVEGIVALPTQLF  365
            NANYAWI+HMI  LA+NG  G+VLANG++S+ + +E EIRK++IE+DLVE IV+LP QLF
Sbjct  299  NANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLF  358

Query  366  YSVTIPVTLWFITKNKKQKGKT------LFIDARKMGYMVDRKHRDFTEGIQEDGSLGDI  419
            YS  IPV LWFI++NK Q+GK       LFIDAR +G MV R  ++F++         DI
Sbjct  359  YSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSD--------EDI  410

Query  420  DLLAKTFEDFQNGV---LEEKKGFSAIASIEDIAKQDYILTPGRYVGIeeqeddgepfee  476
            + +A+T++  +       E+  GF  + ++E++ +++YILTPGRYVG+ + E+D EPFE+
Sbjct  411  QKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQ  470

Query  477  KMTRLTSELSDMFKKSHELEEEIRKKLGAIGYEV  510
            KM R+TSELS+ F KS ELE++IRK L ++GY V
Sbjct  471  KMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

164) Sros_7556 in NC_013595


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  463 bits (1745),  Expect = 1e-131, Method: Compositional matrix adjust.
 Identities = 274/528 (52%), Positives = 390/528 (74%), Gaps = 31/528 (5%)

Query  19   STKEIQDILWKAADKLRGSMDAAQYKEFVLGLVFLKYVSDAFAERRATLAADPELAELPE  78
            +T  +++ LW+AADKLRGSMDAA+YK+  LGL+FLKYVSD+F E+   L  DP   E   
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADE---  58

Query  79   HRRAAFLEEKDEYTEANVFWVPPPARWDYISDNAQSAVDGVGKLLDDAMDAIMKENPTLT  138
                   E++DEY   N+FWVP  ARW+YI+DNA+ +   +G+L+D AM AI KEN +L 
Sbjct  59   -------EDQDEYLAENIFWVPKEARWQYINDNAKKP--EIGQLIDKAMIAIEKENESLK  109

Query  139  GVLPKIFNRDNVDKKRLKELVDLISDARFT-GHGARPAQDVLGETYEYFLERFARAEGKR  197
            GVLPK + R  +DK +L +++DL++   F  G+     QDVLG  YEYF+ +FA AEGK 
Sbjct  110  GVLPKEYARPALDKEKLGDIIDLFT---FKLGDTESRKQDVLGRVYEYFIAKFASAEGKN  166

Query  198  AGEFYTPASVVRLLVEILEPYEGRVYDPCCGSGGMFVQAGKFVTAHAGRDHTHDIAVYGQ  257
            AGEFYTP+S+V+LLVE++EPY GR+YDPCCGSGGMFVQ+ +FV  H GR   +DIA+YGQ
Sbjct  167  AGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGR--LDDIAIYGQ  224

Query  258  ETNERTWRLAKMNLAIHGMDPKGVGDRWADTFDDDKLPDLKADFVMANPPFNLSDWARN-  316
            E+N  TW+LAKMNLAI+G+D +++G+R ADTF++D   +LKAD+++ANPPFN SDW+++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGID-NDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  317  -VGDRRWMYGVPPQSNANYAWLQHIVFKLGERGSAGVVLANGSMASKQSGEGEIRTKLVQ  375
             ++D RW +GVPP++NANYAW++H++ KL+  G+AG VLANGSM++   +E EIR +L++
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  376  ADLVACMVALPGNLFRTTAIPACLWFLTKDKTPQGAKALAERRGEVLFIDARNLGTMVDR  435
             DLV C+V+LPG+LF +T IP CLWF++++K  +G K   ER+ E+LFIDAR++G MV R
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKK---ERKNEILFIDAREIGHMVSR  400

Query  436  TERILTDEDLARIADTYHAWRGTRSARAKGLKYENVAGFCHSASLEEIREHDFVLTPGRY  495
            T + ++DED+ ++A+TYH+WRGT         YE++AGFC   +LEE+++++++LTPGRY
Sbjct  401  TLKEFSDEDIQKVAQTYHSWRGTNDKY-----YEDIAGFCKVVNLEEVKNNEYILTPGRY  455

Query  496  VGateveedpdaepveeRVARLTKELFEHFEESARLEKVVREQLGGIN  543
            VG    + + D EP E+++ R+T EL E+F  S  LE  +R  L G+ 
Sbjct  456  VG--LADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLG  501

165) Franean1_3767 in NC_009921


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  463 bits (1746),  Expect = 1e-131, Method: Compositional matrix adjust.
 Identities = 269/545 (50%), Positives = 386/545 (71%), Gaps = 54/545 (9%)

Query  20   ETLWKTADKLRGSMDAAQYKDFVLVLIFLKYVSDAFAERREQIRQDVLADGIDESRAEEF  79
            E LW++ADKLRGSMDAA+YK+  L LIFLKYVSD+F E+  +++QD  AD          
Sbjct  8    EKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADE---------  58

Query  80   LDDVDEYAGQGVFWVPGRARWEHIAANAKSAGIGELLNAAMDAVMKTNPALTGVLPRIFN  139
             +D DEY ++ +FWVP  ARW+ I  NAK + IG+L++ AM A+ K N +L GVLP+ + 
Sbjct  59   -EDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYA  117

Query  140  GEGVDQHRLGELVDLLGDARFTGHRATERPPSTPTGEDGALFGESAAGVPTEAATRPARD  199
              ++D+++LG+++DL+    F                    +G++ +           +D
Sbjct  118  RPALDKEKLGDIIDLFT---FK-------------------LGDTES---------RKQD  146

Query  200  VLGEVYEYFLERFARAEGKRGGEFYTPASVVRLLVEVLEPYEGRVYDPCCGSGGMFVQAE  259
            VLG VYEYF+ +FA AEGK +GEFYTP+S+V+LLVE++EPY GR+YDPCCGSGGMFVQ+E
Sbjct  147  VLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSE  206

Query  260  KFVVAHRGLTHSGDIAVYGQESNERTWRLAKMNLAIHGITGDLSARWDDTFRNDRHPDLR  319
            +FV  H+G  + +DIA+YGQESN  TW+LAKMNLAI+GI  DL+ R  DTF+ND H +L+
Sbjct  207  RFVEKHQG--RLDDIAIYGQESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLK  264

Query  320  ADFILANPPFNMSDWA--RTVDDQRWRYGTPPTGNANFAWLQHIIAKLGSRGTAGVVMAN  377
            AD+ILANPPFN SDW+  R +DD RW++G PP GNAN+AW++H+I+KL++ GTAG V+AN
Sbjct  265  ADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLAN  324

Query  378  GSMSSKQSGEGEIRAALVEADLVACMIALPPQLFRTTQIPACLWFFAKDKGQLGARWLAE  437
            GSMS+   +E EIR  L+E DLV C+++LP QLF +TQIP CLWF++++KGQ G +   E
Sbjct  325  GSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKK---E  381

Query  438  RRGETLFIDARDMGTMIDRTERILTDGDLEKITDTYRAWRGAKSARDKGLAYENIPGFCY  497
            R+ E LFIDAR++G M+ RT + ++D D++K+++TY++WRG++        YE+I+GFC 
Sbjct  382  RKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCK  436

Query  498  SASTEEIRTHDHVLTPGRYVGAAEADISNDEPMAEKIERLAKELFIHFEESARLEKEVRS  557
              + EE++ ++ +LTPGRYVG A+ +  ++EP  +K+ R++ EL  +F  S  LE ++R 
Sbjct  437  VVNLEEVKNNEYILTPGRYVGLADVE-EDEEPFEQKMKRITSELSEQFAKSKELEDQIRK  495

Query  558  QLERL  562
             LE L
Sbjct  496  SLEGL  500

166) Sputcn32_2908 in NC_009438


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  461 bits (1738),  Expect = 4e-131, Method: Compositional matrix adjust.
 Identities = 269/519 (52%), Positives = 392/519 (76%), Gaps = 30/519 (5%)

Query  8    TLWAAADKLRANVDAAEYKHLVLGLIFLKFVSDTFaarraelerrFVDVNDDYFLHDADA  67
             LW AADKLR+++DAAEYK++ LGLIFLK+VSD+F  +       + ++++D + ++   
Sbjct  9    KLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEK-------YKELKQDPYADE---  58

Query  68   DFIAEELEERDYYIEVNVFWVPEPARWEGLRANAKQANIGKQIDDALDAIEKENPSLKGI  127
                   E++D Y+  N+FWVP  ARW+ +  NAK+++IG+ ID A+ AIEKEN SLKG+
Sbjct  59   -------EDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGV  111

Query  128  LDKRYARAPLPDGKLGELVDLISTIGFGEDQSKARDILGQVYEYFLGQFASAEGKKGGQF  187
            L K YAR++L   KLG+++DL+ T+ +G+ +S+ +D+LG+VYEYF+++FASAEGK++G+F
Sbjct  112  LPKEYARPALDKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEF  170

Query  188  YTPQSIVNTLVAVLDPHQGKVYDPCCGSGGMFVQSEKFIEAHGGKLGDVSIYGQESNPTT  247
            YTP SIV+ LV +++P +G++YDPCCGSGGMFVQSE+F+E H G+L+D++IYGQESNPTT
Sbjct  171  YTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTT  230

Query  248  WRLAAMNLAIRGIDFNLGREPGDTFTKNQHSDLRADYILANPPFNISDWWHGSLEGDPRW  307
            W+LA MNLAIRGID +LG   +DTF ++ H +L+ADYILANPPFN SDW +  L +D RW
Sbjct  231  WKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRW  290

Query  308  VYGNPPQGNANYAWLQHMLYHLKPTGRAGIVLANGSMSSSQNTEGDIRRamvdadvvevm  367
             +G PP+GNANYAW++HM+  L P G AG+VLANGSMS+S + E +IR+ +++ D+VE +
Sbjct  291  QFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECI  350

Query  368  vaLPGQLFFNTQIPACLWFLTKQ-----KTARKGEVLFIDARKLGKMISRVQSELDQAAI  422
            V+LPGQLF++TQIP CLWF++++     K  RK E+LFIDAR +G M+SR   E+ +  I
Sbjct  351  VTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDI  410

Query  423  DRIANTAKAWRGEDMTGVEGFEDGYQDIPGFCRSVPLSEIAEHGHVLTPGRYVGAEEVED  482
            +++A+T  +WRG +       +  Y+DI+GFC+ V L E+ ++  +LTPGRYVG  +VE+
Sbjct  411  QKVAQTYHSWRGTN-------DKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEE  463

Query  483  CDDAFADKMTMLTEKLAEQMAKGAELDQLIRQKLGGLGY  521
             +++F +KM  +T  L+EQ AK+ EL++ IR+ L GLGY
Sbjct  464  DEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGY  502

167) Cagg_3300 in NC_011831


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  461 bits (1738),  Expect = 5e-131, Method: Compositional matrix adjust.
 Identities = 276/520 (54%), Positives = 378/520 (73%), Gaps = 19/520 (3%)

Query  20   ATVGYEAELWQMANALRGSMDAAEYKHVVLGLIFLKYISDAFEEQHARLEAERAQGADPE  79
            AT+G+E  LWQ A+ LRGSMDAAEYK+V LGLIFLKY+SD+FEE+   L  +    AD E
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPY--ADEE  59

Query  80   DPDEYRAVNVFWVPPEARRAHRNARVKQPTIGRLVDDAMAGIERDNPALTGVVPKNDDRP  139
            D DEY A N+FWVP EAR+   N   K+P IG+L+D AM +IE++N +L GV+PK+  RP
Sbjct  60   DQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARP  119

Query  140  VLDRQHLGRLIDLIGTIRVGDEEARAKDVLGRVDEEGRSQFASAEGTQRGALTTPRCVVK  199
             LD++ LG +IDL+ T+++GD E+R +DVLGRV E   ++FASAEG + G + TP  +VK
Sbjct  120  ALDKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVK  178

Query  200  LPVERLDPYRGRVDDPCCGSAGMFVQSVEFIRAHAngngnggKTGADISIYGQESNYTTW  259
            L VE ++PY+GR+ DPCCGS+GMFVQS  F+  H            DI+IYGQESN TTW
Sbjct  179  LLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRL-------DDIAIYGQESNPTTW  231

Query  260  RLAKMNLAIRGIDGQIA--HGDTFHNDRFPDLKADFILANPPFNVKDWGGERLRDDKRWK  317
            +LAKMNLAIRGID +++  ++DTFHND   +LKAD+ILANPPFN  DWG ERL DD RW+
Sbjct  232  KLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQ  291

Query  318  YGVPPVGNANFAWVQRIIHHLAPTGYAGFVLANGSMSSNRSGEGEIRKHIIEADLVDCMV  377
            +GVPP GNAN+AW++++I  LAP G AGFVLANGSMS++  +E EIRK++IE DLV+C+V
Sbjct  292  FGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIV  351

Query  378  ALPGRRCSATQIPACLWFSARDTSGRGGFGPHPSRNRRGHVRFIDARTMGCMVDRTHCDL  437
            +LPG+   +TQIP CLWF + +       G +  ++R+ ++ FIDAR +G MV RT  ++
Sbjct  352  TLPGQLFYSTQIPVCLWFISNNK------GQNGKKERKNEILFIDAREIGHMVSRTLKEF  405

Query  438  TDEDITKIADTSHAWRGEQEAGDDADVPGFGTSATREAIRTHGDVLTPGRSVGAEAVEDD  497
            +DEDI K+A+T H+WRG ++   + D++GF      E ++ +  +LTPGR VG   VE+D
Sbjct  406  SDEDIQKVAQTYHSWRGTNDKYYE-DIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEED  464

Query  498  GEPFDEKMKRLVTQLREQQAEARRLDEAIWKNLRELGYDA  537
             EPF++KMKR+ ++L EQ A ++ L++ I+K+L  LGY+ 
Sbjct  465  EEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

168) Metme_1963 in NC_015572


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  460 bits (1735),  Expect = 8e-131, Method: Compositional matrix adjust.
 Identities = 273/514 (54%), Positives = 384/514 (75%), Gaps = 26/514 (5%)

Query  8    TLWAAADKLRANMDAAEYKHLVLGLIFVKYISDTFAARRAELTR-RFTDESDEYFLHECD  66
             LW AADKLR++MDAAEYK++ LGLIF+KY+SD+F  +  EL +  ++DE D+       
Sbjct  9    KLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ-------  61

Query  67   DEMLAEELEDRDYYKEVNVFWVPETARWEALRAAAKQADIGKRIDDALAIIETENPKLKG  126
            DE LAE           N+FWVP  ARW+ +   AK+++IG+ ID A+  IE EN  LKG
Sbjct  62   DEYLAE-----------NIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKG  110

Query  127  ILDKRYARAHLPDGKLGELVDLVSTIGFGDDPGQARDVLGQVYEYFLGQFASAEGKKGGQ  186
            +L K YAR+ L   KLG+++DL  T+ +GD  ++ +DVLG+VYEYF+++FASAEGK++G+
Sbjct  111  VLPKEYARPALDKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGE  169

Query  187  FYTPASIVKTLVAVLAPHHGKVYDPCCGSGGMFVQSEKFIEAHGGKLGDVSIYGQESNPT  246
            FYTP+SIVK LV ++ P  G++YDPCCGSGGMFVQSE+F+E H G+L+D++IYGQESNPT
Sbjct  170  FYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPT  229

Query  247  TWRLAAMNLAIRGIDFNLGREPSDTFTRNQHPDLRADFILANPPFNISDWWHGSLEGDPR  306
            TW+LA MNLAIRGID +LG   +DTF  + H +L+AD+ILANPPFN SDW +  L +D R
Sbjct  230  TWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYR  289

Query  307  WVYGTPPQGNANYAWLQHMLYQLKANGRAGIVLANGSMSSSQNSEGDIRKAMVDADVVEV  366
            W +G PP+GNANYAW++HM+ +L +NG AG+VLANGSMS+S + E +IRK +++ D+VE 
Sbjct  290  WQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVEC  349

Query  367  MIALPGQLFFNTQIPACLWFLAKQKTY-----RQGEMLFIDARKLGKMISRVQTEFTDEV  421
            +++LPGQLF++TQIP CLWF++++K       R+ E+LFIDAR +G M+SR   EF+DE 
Sbjct  350  IVTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDED  409

Query  422  IDRIAGTVAAWRGEAEAGEYQDTPGYCRSVTLAEIAEHGHVLTPGRYVGaeaveddddaf  481
            I+++A T  +WRG  +   Y+D +G+C+ V L E+ ++  +LTPGRYVG   VE+D+++F
Sbjct  410  IQKVAQTYHSWRGTNDK-YYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPF  468

Query  482  adKMQTLTEKLGEQMAKGAELDQLIRQKLGGLGY  515
             +KM+ +T  L+EQ AK+ EL++ IR+ L GLGY
Sbjct  469  EQKMKRITSELSEQFAKSKELEDQIRKSLEGLGY  502

169) NAL212_2263 in NC_015222


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  460 bits (1735),  Expect = 8e-131, Method: Compositional matrix adjust.
 Identities = 283/540 (53%), Positives = 389/540 (73%), Gaps = 43/540 (7%)

Query  7    IKTEPLEKQLWKAACKLQKNIDAAEYKHVVLGLMFLKYISDAFEELHDRLEKGEGDLVGA  66
            + T  +E +LW+AA KL+ ++DAAEYK+V LGL+FLKY+SD+FEE    L ++      A
Sbjct  1    MATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPY----A  56

Query  67   DPEDKDEYRAENVFFVPAESRWPHLVAHARQPDIGTHVDAAMDAIEKENPSLKGVLPKVY  126
            D ED+DEY AEN+F VP E+RW  +  +A++P+IG  +D AM AIEKEN SLKGVLPK Y
Sbjct  57   DEEDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY  116

Query  127  ARQNLDPTSLGELIDLIGNIALGDAKARSQDVLGHVFEYFLGEFALAEGKQGGQFYTPRS  186
            AR  LD   LG++IDL+  + LGD+ +R QDVLG+V+EYF++ FA AEGK++G+FYTP S
Sbjct  117  ARPALDKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSS  175

Query  187  IVELLVNMLEPYQGRVFDPCCGSGGMFVQSEKFVEEHQGRIDDISIYGQESNQTTWRLAK  246
            IV LLV+M+EPY+GR++DPCCGSGGMFVQSE+FVE HQGR+DDI+IYGQESN TTW+LAK
Sbjct  176  IVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAK  235

Query  247  MNLAIRGIDSSQVKWNNEGSFLNDAHKDLKADFIIANPPFNVSDWSGEQLRGDARWQYGT  306
            MNLAIRGID+    +N + +F ND HK+LKAD+I+ANPPFN SDW+ E+L +D RWQ+G 
Sbjct  236  MNLAIRGIDNDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGV  294

Query  307  PPPGNANFAWLQHFIYHLSPTGIAGVVLAKGALTSKTSGEGDIRKRLITDGNLIDCIVNL  366
            PP GNAN+AW++H I  L+P G AG VLA+G++++   +E +IRK LI + +L++CIV L
Sbjct  295  PPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLI-EQDLVECIVTL  353

Query  367  PAKLFLNTQIPAALWFLNRNRAGMDIGGHAKTIVGAnnhlplqnppqqnppqyhhpRTHE  426
            P++LF +TQIP  LWF++ N+     G ++K                         R +E
Sbjct  354  PGQLFYSTQIPVCLWFISNNK-----GQNGKK-----------------------ERKNE  385

Query  427  ILFIDARNLGHLINRRTKELSHDDIQQIANTYHAWRNPAVIPAQTGIQPYEDIKGFCASV  486
            ILFIDAR++GH+++R  KE+S++DIQ++A+TYH+WR        T  + YEDI GFC  V
Sbjct  386  ILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRG-------TNDKYYEDIAGFCKVV  438

Query  487  PVERVAELDYVLTPGRYVGLPD-EEDDFNFPERFAALKAEFEAQLQEEVALNQAIVESLA  545
             +E V + +Y+LTPGRYVGL+D EED+  F ++   + +E+  Q+     L++ I  SL 
Sbjct  439  NLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLE  498

170) Bxe_A0224 in NC_007951


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  459 bits (1731),  Expect = 1e-130, Method: Compositional matrix adjust.
 Identities = 271/516 (53%), Positives = 382/516 (75%), Gaps = 28/516 (5%)

Query  8    TLWATADKQRANMDAAEYKHIVLGLIFLKYISDTFAGRRAELTR-RFADENDEYFlrecd  66
             LW +ADK R++MDAAEYK++ LGLIFLKY+SD+F  +  EL +  +ADE+D+       
Sbjct  9    KLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ-------  61

Query  67   dellaeeledrdYYREVNVFWVPETARWESLRSAAKQTDIGKRIDEALAEIEAENPKLKG  126
                       D Y   N+FWVP  ARW+ +   AK+ +IG+ ID A+  IE EN  LKG
Sbjct  62   -----------DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKG  110

Query  127  ILDKRYARSQLPDGKLGELVDLISTIGFGEDASHARDVLGQVYEYFLGQFASAEGKKGGQ  186
            +L K YAR+ L   KLG+++DL+ T+ +G+  S+ +DVLG+VYEYF+++FASAEGK++G+
Sbjct  111  VLPKEYARPALDKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGE  169

Query  187  FYTPASIVKTLVAVLAPHHGKVYDPCCGSGGMFVQSEKFIEAHGGKLGDVSIYGQESNPT  246
            FYTP+SIVK LV ++ P  G++YDPCCGSGGMFVQSE+F+E H G+L+D++IYGQESNPT
Sbjct  170  FYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPT  229

Query  247  TWRLAAMNLAIRGIDYNLGREPADTFVRNQHPDLRADFVLANPPFNVSDWWHGSLEGDPR  306
            TW+LA MNLAIRGID +LG   ADTF  + H +L+AD++LANPPFN SDW +  L +D R
Sbjct  230  TWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYR  289

Query  307  WVYGTPPQGNANYAWLQHMLYHLKPNGRAGIVLANGSMSSSQNSEGDIRRamvdadvvev  366
            W +G PP+GNANYAW++HM+  L PNG AG+VLANGSMS+S + E +IR+ +++ D+VE 
Sbjct  290  WQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVEC  349

Query  367  mvaLPGQLFFNTQIPACLWFLAKQ-----KTTRKGEVLFIDARKLGSMISRVQTELTDEI  421
            +V+LPGQLF++TQIP CLWF++++     K  RK E+LFIDAR +G M+SR   E++DE 
Sbjct  350  IVTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDED  409

Query  422  IERIANTVAAWRGEAIDGVGEYADVPGYCRSVKLAEIAEHGHVLTPGRYVGAEKVEDDDE  481
            I+++A+T  +WRG        Y D++G+C+ V+L E+ ++  +LTPGRYVG   VE+D+E
Sbjct  410  IQKVAQTYHSWRGTNDK---YYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEE  466

Query  482  AFVEKMQKLTEMLGEQMAKGAELDQLIRQKLGGMGY  517
            +F +KM+++T  L+EQ AK+ EL++ IR+ L G+GY
Sbjct  467  PFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGY  502

171) PSM_A2853 in NC_014803


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  459 bits (1730),  Expect = 2e-130, Method: Compositional matrix adjust.
 Identities = 261/551 (48%), Positives = 393/551 (72%), Gaps = 52/551 (9%)

Query  11   TDLEKKLWNAADKLRSTLDAAQYKHAVLGLVFIKYVSDAFKIRQDELISAFNNPDSDYFL  70
             ++E KLW+AADKLR+++DAA+YK+  LGL+F+KYVSD+F  +  EL             
Sbjct  4    IGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKEL-------------  50

Query  71   DPEDFGGKESAEYQEELAVELEQRDYYLETNTFWVPTQARWSFLQDNNKTVIGGAELPIG  130
                        Y +E     E++D YL  N FWVP +ARW +++DN K           
Sbjct  51   --------KQDPYADE-----EDQDEYLAENIFWVPKEARWQYINDNAKK----------  87

Query  131  NDKTIKITSVGHLIDNALDAIEVANPKLKGVLNKQYTRLQIDQVKLAELIDLIATIPFVH  190
                     +G+LID+A+ AIE  N  LKGVL K+Y+R  +D+ KL+++IDL+ T+ + +
Sbjct  88   -------PEIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEKLGDIIDLF-TFKLGD  139

Query  191  ASLNSKDILGHVYEYMLGQFALAEGKKGGQFYTPKSIVSLMVQMMEPFKGRVYDPAMGSG  250
            +    +D+LG+VYEY +++FA AEGK++G+FYTP SIV L+V+M+EP+KGR+YDP  GSG
Sbjct  140  TESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSG  199

Query  251  GFFVQSEHFINAHKGKIGDVSIYGQEYNHTTWQLASMNMAIRGIDFNFGKEPANTYTNDQ  310
            G FVQSE+F++ H+G+++D++IYGQE N TTW+LA MN+AIRGID ++G   A+T+ ND 
Sbjct  200  GMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDL  259

Query  311  HPDLRADFVMANPPFNMKEWDVGVSDDDPRWAYGTPPSGNANFAWLQHMLYHTAPNGSVG  370
            H +L+AD+++ANPPFN  +W+     DD RW +G PP GNAN+AW++HM+   APNG+ G
Sbjct  260  HKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAG  319

Query  371  LLLANGSMSSNTNNEGAIRKALIEQDLVECMVALPGQLFTNTQIPACIWFLTKNKNARVS  430
            ++LANGSMS++ ++E  IRK LIEQDLVEC+V+LPGQLF +TQIP C+WF+++NK    +
Sbjct  320  FVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNK----G  375

Query  431  ASGRQLTDRRGKVLFIDARNLGYMKDRVLRDFTQTDLDQVTATFHNWQQASD--YQDTAG  488
             +G++  +R+  +LFIDAR++G M  R L++F++ D+++V+ T+H+W+ ++D  Y+D AG
Sbjct  376  QNGKK--ERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGTNDKYYEDIAG  433

Query  489  FCASVDFAGITKHDFVLTPGRYVGAEAAEDDGELFADKMARLTTQLKSQFAESEHLEAQI  548
            FC  V++  + +++++LTPGRYVG    E+D E F +KM R+T++L  QFA S +LE QI
Sbjct  434  FCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQI  493

Query  549  KQNLEGLGYDI  559
            +++LEGLGY++
Sbjct  494  RKSLEGLGYGV  504

172) Sulba_2350 in NC_018002


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  458 bits (1727),  Expect = 3e-130, Method: Compositional matrix adjust.
 Identities = 261/506 (52%), Positives = 377/506 (75%), Gaps = 19/506 (3%)

Query  9    SMEETLWESANKLRGSVESSEYKHIVLGLIFLKFVSDTFEERREKLLAEGKEAFIDMVEF  68
            + EE LW++A+KLRGS++++EYK++ LGLIFLK+VSD+FEE+   L    ++++ D  + 
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKEL---KQDPYADEEDQ  61

Query  69   --YTMDNVFYLPETSRWSYIKQNAKQDDIALKIDTALASIEKTNPSLKGALPDNYFSRLG  126
              Y  +N+F +P  +RW YI++NAK+ +I+  ID A+ +IEK N SLKG LP +Y +R +
Sbjct  62   DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-ARPA  120

Query  127  LDPSKLSSLIDTIN-NINTLEDKGHDVVGRVYEYFLGEFALAEGKLGGQFYTPKSIVNLI  185
            LD  KL+ +ID +  ++   E + +DV+GRVYEYF++ FA AEGK +G+FYTP SIV+L+
Sbjct  121  LDKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLL  180

Query  186  ANMIEPYKGKIYDPACGSGGMFVQSLKFIEAHKGNKKDISIYGQEFTATTYKLAKMNLAI  245
             +MIEPYKG+IYDP CGSGGMFVQS +F+E H+G   DI+IYGQE  +TT KLAKMNLAI
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240

Query  246  RGISANLGAVPADSFFKDQHPDLKADYIMANPPFNQKEWRGVNELLDDPRWAGYEVPSAS  305
            RGI  +LG   AD+F +D H +LKADYI+ANPPFN  +W G + LLDD RW  + VP+ +
Sbjct  241  RGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYRWQ-FGVPPKG  298

Query  306  NANYGWILHMVSKLSENGIAGFVLAKGSLTSNSSNEGEIRKQLIENNLIDCIVNLPAKLF  365
            NANY+WI HM+SKL+ NG AGFVLA+GS+++++ +E EIRK+LIE++L++CIV LP++LF
Sbjct  299  NANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLF  358

Query  366  FNTQIPACLWFIKKNK-------KTNDILFIDARNIGHLINRRNKDFSEANIEQIASTYH  418
            ++TQIP CLWFI +NK       + N+ILFIDAR+IGH+++R  K+FS+ +I+++A TYH
Sbjct  359  YSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYH  418

Query  419  NWKV--EKHYEDVKGFCKSASVEEVRTLGYVLTPGRYVGLEDSEDEFD-FKERFESLHVK  475
            +W+   +K YED+ GFCK  ++EEV+   Y+LTPGRYVGL D E++ + F ++   +   
Sbjct  419  SWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSE  478

Query  476  LQEQMKEEQSLNERILANLAKVNLAV  501
            L EQ    + L+++I  +L  +  +V
Sbjct  479  LSEQFAKSKELEDQIRKSLEGLGYGV  504

173) Cyan7425_3148 in NC_011884


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  458 bits (1726),  Expect = 4e-130, Method: Compositional matrix adjust.
 Identities = 282/524 (54%), Positives = 397/524 (76%), Gaps = 25/524 (4%)

Query  14   SLEQKLWKAADKLRKNIDAAEYKHIVLGLIFLKYISDAFDKLHAKLVAGEGEYAGADPED  73
            ++E+KLW+AADKLR ++DAAEYK++ LGLIFLKY+SD+F+     L   ++ YA  D ED
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKEL--KQDPYA--DEED  60

Query  74   PDEYKAENVFFVPPDARWSVLQGQAKQPTIGQKVDEAMEAIERENPKLLKGILPKVYGQQ  133
             DEY AEN+F VP +ARW  ++++AK+P IGQ +D AM AIE+EN  L KG+LPK Y++ 
Sbjct  61   QDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESL-KGVLPKEYARP  119

Query  134  KLDPTALGGLIDMIGSTNLAKAEAESDGQLVLETEPIAEPRRQQDLLGQVYEYFLGQFAL  193
             LD   LG++ID++ + +L+ +E+                 R+QD+LG+VYEYF+++FA 
Sbjct  120  ALDKEKLGDIIDLF-TFKLGDTES-----------------RKQDVLGRVYEYFIAKFAS  161

Query  194  AEGKKGGQFYTPESVVKVLVEMLEPYKGRVFDPCCGSGGMFVQSEKFVSHHQGRLNDISI  253
            AEGK++G+FYTP S+VK+LVEM+EPYKGR++DPCCGSGGMFVQSE+FV  HQGRL+DI+I
Sbjct  162  AEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAI  221

Query  254  YGQESNETTYKLCRMNLAIRGIDGSNIRWNPEGSFLKDAHKDLKADFVIANPPFNDSDWG  313
            YGQESN TT KL +MNLAIRGID     +N++ +F +D HK+LKAD+++ANPPFN SDWG
Sbjct  222  YGQESNPTTWKLAKMNLAIRGIDNDLGERNAD-TFHNDLHKGLKADYILANPPFNASDWG  280

Query  314  GDLLRQDGRWQYGVPPVGNANFAWVQHFLYHLALTGAAGFVlsngslssntsgegeIRKA  373
             + L +D RWQ+GVPP GNAN+AW++H +  LA  G+AGFVL+NGS+S++  +E EIRK 
Sbjct  281  QERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKN  340

Query  374  LVQADLVDCIVMLPTQLFYNTGIPACLWFLSRYKNGNKNRDRKGEVLFIDASELGYMVNR  433
            L++ DLV+CIV LP QLFY+T IP CLWF+S  K  N +++RK E+LFIDA E+G MV+R
Sbjct  341  LIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSR  400

Query  434  RNRAFAEEDIQKIAGTYHEWK-RDGSTYQDIKGFCKSATLAEIEKHNFVLTPGRYVGIPD  492
              + F++EDIQK+A TYH W+  ++  Y+DI GFCK   L E+ +++++LTPGRYVG++D
Sbjct  401  TLKEFSDEDIQKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLAD  460

Query  493  EVESEVSFeetmaaltaelaaQMKEAAELDEEIKIQLAKVGFDL  536
              E E +FE+ M  +T+EL+ Q   + EL+++I+  L  +G+++
Sbjct  461  VEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

174) HCBAA847_2281 in NC_020555


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  457 bits (1720),  Expect = 1e-129, Method: Compositional matrix adjust.
 Identities = 268/499 (54%), Positives = 374/499 (75%), Gaps = 13/499 (2%)

Query  10   LEAALFSAADKLRKNIDAAEYKHIVLGLVFLKYISDSFESLHKELLSQN-EDAEDKDEYI  68
            +E  L  AADKLR ++DAAEYK++ LGL+FLKY+SDSFE   KEL  +   D ED+DEY+
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDEYL  65

Query  69   AKNIFFVPQDSRWSTLLSKAKSPQIGKDLDYALDLIEKDNPQLKGVLPKVYAKDNLDSAT  128
            A NIF VP+++RW  +  +AK P+IG+ +D A+  IEK+N  LKGVLPK YA+  LD   
Sbjct  66   AENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEK  125

Query  129  LGDLINLID-SISLNQENTSDILGHIFEYFLGEFALSEGKKGGQFYTPKSVVELLVAMLE  187
            LGD+I+L+   ++  +    D+LG+++EYF++ FA +EGK++G+FYTP S+V LLV M+E
Sbjct  126  LGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIE  185

Query  188  PYNGRVFDPCCGSGGMFVQSERFVREHQGKISDISIYGQESNQTTWRLAKMNLALRKIDS  247
            PY+GR++DPCCGSGGMFVQSERFV  HQG++ DI+IYGQESN TTW+LAKMNLA+R ID+
Sbjct  186  PYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGIDN  245

Query  248  SSLKWNSEGSFLNDAHKDLKADFIIANPPFNATDWGSEALENDVRWQYGTPPSTNANYAW  307
                +N++ +F ND HK+LKAD+I+ANPPFNA+DWG E L +D RWQ+G PP  NANYAW
Sbjct  246  DLGERNAD-TFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAW  304

Query  308  ISHFIHHLAPKGRAGFVLAKGSLTSNTSTEGQIRKNLIESNLIECIVNLPAKLFLNTQIP  367
            I H I  LAP+G AGFVLA+GS++++   E +IRKNLIE +L+ECIV LP++LF +TQIP
Sbjct  305  IEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIP  364

Query  368  ACLWFIKRNKPH-------NNTLFIDARSLGELINRKNRILNKDDIDKITETYHKWQKAQ  420
             CLWFI  NK +       N+ LFIDAR +G++++R  + ++ +DI+K+++TYH W+ ++
Sbjct  365  VCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGTN  424

Query  421  EQNGDYSDILGFCKSVSKEEMANLGYVLTPGRYVGLAeddedfdf-erefTRLKAELESQ  479
            ++   Y DI GFCK V+ EE+ N  Y+LTPGRYVGLA+ +ED +  E+   R+ +EL  Q
Sbjct  425  DKY--YEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQ  482

Query  480  IKEERILSEKILNNLELIG  498
            +   + L ++I ++LE +G
Sbjct  483  FAKSKELEDQIRKSLEGLG  501

175) hsdM in NC_004757


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  457 bits (1722),  Expect = 9e-130, Method: Compositional matrix adjust.
 Identities = 282/562 (51%), Positives = 400/562 (72%), Gaps = 65/562 (11%)

Query  11   DLEKKLWTAADKLRSNLDAAVYKHVVLGLIFLKYVSDAFeerqrelreqFTNPQHDYYMD  70
            ++E KLW AADKLR+++DAA YK+V LGLIFLKYVSD+F        E++ + ++D Y D
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSF-------EEKYKELKQDPYAD  57

Query  71   PEEYGGAGTPEYEDNIAAELEVRDYYTEKNVFWVPVEARWQTLRDCAQLPPKAALPWNKP  130
             E+                   +D Y   N+FWVP EARWQ + D A+ P          
Sbjct  58   EED-------------------QDEYLAENIFWVPKEARWQYINDNAKKP----------  88

Query  131  GKDEPEEMRSVGWLIDNAMEAIERENIRLKNVLNKDFARVQLDSSKLGELIALFSDTDFA  190
                      +G LID+AM AIE+EN  LK VL K++AR  LD  KLG++I LF      
Sbjct  89   ---------EIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEKLGDIIDLF------  133

Query  191  AKTYKGQPLSLQSRDILGHVYEYFLGQFALAEGKKGGQYYTPKSIVTLIVEMLQPFKGRV  250
              T+K      + +D+LG+VYEYF+++FA AEGK++G++YTP SIV L+VEM++P+KGR+
Sbjct  134  --TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRI  191

Query  251  YDPAMGSGGFFVQSEEFIGQHGGKAANGKSGQISVYGQESNPTTWRLAAMNMAIRGIDFN  310
            YDP  GSGG FVQSE F+ +H     +G+ ++I++YGQESNPTTW+LA MN+AIRGID +
Sbjct  192  YDPCCGSGGMFVQSERFVEKH-----QGRLDDIAIYGQESNPTTWKLAKMNLAIRGIDND  246

Query  311  FGSGPADTLLNDLHPDLRADFVMANPPFNMKEWWNEKLANDPRWIAGTPPQGNANFAWLQ  370
            +G   ADT+ NDLH +L+AD+++ANPPFN  +W +E+L +D RW  G PP+GNAN+AW++
Sbjct  247  LGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWIE  306

Query  371  HMLWHLAPTGSMALLLANGSMSSNTNSEGEIRKRLTEDDYVECMVALPGQLFTNTQIPAC  430
            HM+  LAP G+ +++LANGSMS++ + E EIRK L E+D VEC+V+LPGQLF +TQIP C
Sbjct  307  HMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVC  366

Query  431  IWFLTRDKQNGFALDKKKRDRRGEFLFIDARQMGYMKDRVLRDFTVDDIQKIADTFHAWQ  490
            +WF++ +K      ++ K++R+ E+LFIDAR++G M  R L++F+ +DIQK+A+T+H+W+
Sbjct  367  LWFISNNKG-----QNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWR  421

Query  491  QGDG--YEDVPGFCKSASLEEVRKHEHVLTPGRYVGTAEQEEDGEPFADKMQRLTAQLAE  548
              ++  YED++GFCK  +LEEV+++E +LTPGRYVG A+ EED EPF +KM+R+T++L+E
Sbjct  422  GTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSE  481

Query  549  QFAESARLETEIRKNLAGLGYG  570
            QFA S  LE +IRK+L GLGYG
Sbjct  482  QFAKSKELEDQIRKSLEGLGYG  503

176) CAP2UW1_1873 in NC_013194


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  456 bits (1718),  Expect = 2e-129, Method: Compositional matrix adjust.
 Identities = 270/511 (53%), Positives = 383/511 (75%), Gaps = 22/511 (4%)

Query  8    TLWATADKLRANMDAAEYKHLVLGLIFVKYISDTfaarraelarrfadpaddyyldaadl  67
             LW +ADKLR++MDAAEYK++ LGLIF+KY+SD+F  +  EL +                
Sbjct  9    KLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPY-------------  55

Query  68   iaEELEDRDYYREVNVFWVPESARWEALRTAAKQPDIGKRIDDALTLIEVENPKLKGILD  127
               + ED+D Y   N+FWVP  ARW+ +   AK+P+IG+ ID A+  IE EN  LKG+L 
Sbjct  56   --ADEEDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLP  113

Query  128  KRYARAQLPDGKLGELVDLVSTIGFGADPGKARDVLGQVYEYFLGQFASAEGKKGGQFYT  187
            K YAR+ L   KLG+++DL  T+ +G   ++ +DVLG+VYEYF+++FASAEGK++G+FYT
Sbjct  114  KEYARPALDKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYT  172

Query  188  PASIVKTLVAVLAPHHGKVYDPCCGSGGMFVQSEKFVEAHGGKLGNVSIYGQESNPTTWR  247
            P+SIVK LV ++ P  G++YDPCCGSGGMFVQSE+FVE H G+L++++IYGQESNPTTW+
Sbjct  173  PSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWK  232

Query  248  LAAMNLAIRGIDFNLGREPADTFTRNQHPDLRADFILANPPFNVSDWWHGSLEGDPRWEF  307
            LA MNLAIRGID +LG   ADTF  + H +L+AD+ILANPPFN SDW +  L +D RW+F
Sbjct  233  LAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQF  292

Query  308  GTPPQGNANYAWLQHMLYHLKPSGRAGIVLANGSMSSSQNSEGDIRRAMVDADVVEVMIA  367
            G PP+GNANYAW++HM+  L P+G AG+VLANGSMS+S + E +IR+ +++ D+VE +++
Sbjct  293  GVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVT  352

Query  368  LPGQLFFNTQIPACLWFLTKHKA-----ARPGEVLFIDARKLARMISRVQTELSDEVIDR  422
            LPGQLF++TQIP CLWF++++K+      R  E+LFIDAR +++M+SR   E+SDE I++
Sbjct  353  LPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQK  412

Query  423  IAGTVAAWRDEADAEEYQDIPGYCRSVNLAEIADHGHVLTPGRYVGaeevedddeafadK  482
            +A T  +WR+ ++   Y+DI+G+C+ VNL E+ ++  +LTPGRYVG  +VE+D+E+F +K
Sbjct  413  VAQTYHSWRG-TNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQK  471

Query  483  MQKLTEKLGEQMAKGAELDALIRQKLGGLGY  513
            M+++T  L+EQ AK+ EL+  IR+ L GLGY
Sbjct  472  MKRITSELSEQFAKSKELEDQIRKSLEGLGY  502

177) Psest_4048 in NC_019936


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  456 bits (1718),  Expect = 2e-129, Method: Compositional matrix adjust.
 Identities = 273/562 (49%), Positives = 402/562 (72%), Gaps = 65/562 (11%)

Query  12   LEKKLWTAADKLRSALDASVYKHVVLGLIFLKYVSDAFEERQRELRAQLTNPADDYFMDP  71
            +E KLW AADKLR+++DA+ YK+V LGLIFLKYVSD+FEE+ +EL+       +D + D 
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELK-------QDPYADE  58

Query  72   EDYGDLGSeeyeeniaaeleVRDYYTEKNVFWVPMEARWQTLRELAQLPPGEPLPWNAPG  131
            ED                   +D Y   N+FWVP EARWQ + +                
Sbjct  59   ED-------------------QDEYLAENIFWVPKEARWQYIND----------------  83

Query  132  KDTAEKMRTVGWLIDNAMEAIERENVKLKNVLNKEFSRTQLDSHKLADLIAHFSDTNFSQ  191
                 K   +G LID+AM AIE+EN  LK VL KE++R  LD +KL+D+I  F+      
Sbjct  84   ---NAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEKLGDIIDLFT------  134

Query  192  PSYNGQPLNLKSKDILGHVYEYFLGQFALAEGKKGGQYYTPKSIVTLIVEMLQPFKGRVY  251
              ++    + + +D+LG+VYEYF+++FA AEGK++G++YTP SIV L+VEM++P+KGR+Y
Sbjct  135  --FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIY  192

Query  252  DPAMGSGGFFVQSEEFIAEHGGKVVNGKTGQISVYGQESNPTTWKLAAMNMAIRGLDFNF  311
            DP  GSGG FVQSE F+  H G++     ++I++YGQESNPTTWKLA MN+AIRG+D ++
Sbjct  193  DPCCGSGGMFVQSERFVEKHQGRL-----DDIAIYGQESNPTTWKLAKMNLAIRGIDNDL  247

Query  312  GGQPGDTLQNDLHPDLRADYVMANPPFNMKEWWNAKLEQDPRWLVGTPPQGNANFAWLQH  371
            G + +DT++NDLH +L+ADY++ANPPFN  +W + +L +D RW  G PP+GNAN+AW++H
Sbjct  248  GERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWIEH  307

Query  372  MLYHLAPTGSMALLLANGSMSSNTNNEGEIRKQLIEQDYVECMVALPGQLFTNTQIPACI  431
            M+  LAP G+ +++LANGSMS++ ++E EIRK+LIEQD VEC+V+LPGQLF +TQIP C+
Sbjct  308  MISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVCL  367

Query  432  WFLTKDKANGFNLDKKKRDRRGQFLFIDARQLGYMKDRVLRDFTLNDIKKVADTFHAWQH  491
            WF++++K+     ++ K++R+ ++LFIDAR++G M  R L++F+ +DI+KVA+T+H+W+ 
Sbjct  368  WFISNNKG-----QNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRG  422

Query  492  DEG--YEDVAGFCCSTSLNEIRKHEHVLTPGRYVGAKEQEDDGEVFADKMTRLTAQLAEQ  549
             ++  YED+AGFC   +L+E++++E +LTPGRYVG  + E+D E F +KM R+T++L+EQ
Sbjct  423  TNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQ  482

Query  550  FEESAKLEGEIRKNLAGLGYGI  571
            F  S  LE++IRK+L GLGYG+
Sbjct  483  FAKSKELEDQIRKSLEGLGYGV  504

178) A458_03940 in NC_018028


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  453 bits (1707),  Expect = 1e-128, Method: Compositional matrix adjust.
 Identities = 279/520 (54%), Positives = 384/520 (74%), Gaps = 29/520 (5%)

Query  122  EKTLWATADKLRANMDAAEYKHIVLGLIFLKYISDSFAGRRAELERKlldesddyylgdd  181
            E  LW +ADKLR++MDAAEYK++ LGLIFLKY+SDSF  +  EL +              
Sbjct  7    EEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDP------------  54

Query  182  dpellNAELEDRDYYREVNVFWVPEVARWESIRASAKQVDIGKRIDDALAAIEAENPRLK  241
                  A+ ED+D Y   N+FWVP  ARW+ I  +AK+ +IG+ ID A+ AIE EN  LK
Sbjct  55   -----YADEEDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLK  109

Query  242  NILDKRYARAQLPDGKLGELVDLISTIGFGDDTSKARDLLGQVYEYFLGQFASAEGKKGG  301
             +L K YAR+ L   KLG+++DL+ T+ +GD  S+ +D+LG+VYEYF+++FASAEGK++G
Sbjct  110  GVLPKEYARPALDKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAG  168

Query  302  QFYTPASIVKTLVAVLNPHHGKVYDPCCGSGGMFVQSEKFIEAHGGKLGDVSIYGQESNP  361
            +FYTP+SIVK LV +++P  G++YDPCCGSGGMFVQSE+F+E H G+L+D++IYGQESNP
Sbjct  169  EFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNP  228

Query  362  TTWRLAAMNLAIRGIDFNLGKEPADTFIRNQHSDLRADFVLANPPFNISDWWHGSLEGDP  421
            TTW+LA MNLAIRGID +LG   ADTF  + H +L+AD++LANPPFN SDW +  L +D 
Sbjct  229  TTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDY  288

Query  422  RWVYGTPPQGNANYAWLQHMLYHLKPNGRAGIVLANGSMSSSQNSEGDIRKamveadvve  481
            RW +G PP+GNANYAW++HM+  L PNG AG+VLANGSMS+S + E +IRK ++E D+VE
Sbjct  289  RWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVE  348

Query  482  vmvaLPGQLFFNTQIPACLWFLARQ-----KTARPGEVLFIDARKLGTSVSRVQIELTDA  536
             +V+LPGQLF++TQIP CLWF++ +     K  R  E+LFIDAR +G  VSR   E++D 
Sbjct  349  CIVTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDE  408

Query  537  DIERIAQTVANWRGEPLDVGGEIGEYQDVAGFCRSVKLAEIAEHGHVLTPGRYVGaeeve  596
            DI+++AQT  +WR      G +   Y+D+AGFC+ V+L E+ ++  +LTPGRYVG  +VE
Sbjct  409  DIQKVAQTYHSWR------GTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVE  462

Query  597  dddeafaeKMQRLTQQLGEQMQKGAELDQLIRQKLGGLGY  636
            +D+E+F +KM+R+T +L+EQ  K+ EL++ IR+ L GLGY
Sbjct  463  EDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGY  502

179) hsdM in NC_015740


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  453 bits (1707),  Expect = 2e-128, Method: Compositional matrix adjust.
 Identities = 278/524 (54%), Positives = 384/524 (74%), Gaps = 29/524 (5%)

Query  123  AMEKTLWATADKLRANMDAAEYKHIVLGLIFLKYISDSFAGRRAELTHKlldenddyylg  182
            + E  LW +ADKLR++MDAAEYK++ LGLIFLKY+SDSF  +  EL +            
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDP----------  54

Query  183  dddPEALNAELEDRDYYREVNVFWVPEVARWESIRAAAKQVDIGKRIDDALTAIEAENPR  242
                    A+ ED+D Y   N+FWVP  ARW+ I   AK+ +IG+ ID A+ AIE EN  
Sbjct  55   -------YADEEDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENES  107

Query  243  LKNILDKRYARAQLPDGKLGELVDLISTIGFGDDTGKARDLLGQVYEYFLGQFASAEGKR  302
            LK +L K YAR+ L   KLG+++DL+ T+ +GD  ++ +D+LG+VYEYF+++FASAEGK 
Sbjct  108  LKGVLPKEYARPALDKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKN  166

Query  303  GGQFYTPASIVKTLVAVLNPHYGKVYDPCCGSGGMFVQSEKFIEAHGGKLGDVSIYGQEA  362
            +G+FYTP+SIVK LV +++P  G++YDPCCGSGGMFVQSE+F+E H G+L+D++IYGQE+
Sbjct  167  AGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQES  226

Query  363  NPTTWRLAAMNLAIRGIDFNLGKEPADTFVRNQHSDLRADFVLANPPFNISDWWHGSLEG  422
            NPTTW+LA MNLAIRGID +LG   ADTF  + H +L+AD++LANPPFN SDW +  L +
Sbjct  227  NPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLD  286

Query  423  DPRWVYGTPPQGNANYAWLQHMLYHLKPSGRAGIVLANGSMSSSQNSEGEIRKamveadv  482
            D RW +G PP+GNANYAW++HM+  L P+G AG+VLANGSMS+S + E EIRK ++E D+
Sbjct  287  DYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDL  346

Query  483  vevmvaLPGQLFFNTQIPACLWFLAKQ-----KTARPGEVLFIDARKLGTSVSRVQIELT  537
            VE +V+LPGQLF++TQIP CLWF++++     K  R  E+LFIDAR +G  VSR   E++
Sbjct  347  VECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFS  406

Query  538  DADIERIAQTVAKWRGEPLDMGGEIAEYQDIAGFCRSVKLAEIAEHGHVLTPGRYVGaee  597
            D DI+++AQT   WR      G +   Y+DIAGFC+ V+L E+ ++  +LTPGRYVG  +
Sbjct  407  DEDIQKVAQTYHSWR------GTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLAD  460

Query  598  vedddeafaeKMQRLTQQLGEQMEKGAELDQLIRQKLGGLGYEI  641
            VE+D+E+F +KM+R+T +L+EQ  K+ EL++ IR+ L GLGY +
Sbjct  461  VEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

180) CDCE8392_2206 in NC_016785


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  453 bits (1706),  Expect = 2e-128, Method: Compositional matrix adjust.
 Identities = 257/523 (50%), Positives = 389/523 (75%), Gaps = 26/523 (4%)

Query  14   TSKEIKDTLWKSADKLRGSMDASQYKDVALGLVFIKYVSDSFDERQREIRAELEGQGIDE  73
            ++  + + LW++ADKLRGSMDA++YK+VALGL+F+KYVSDSF+E+ +E++        ++
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELK--------QD  53

Query  74   EYILEDLADVDAYTSENVFWVASNARWDFLKKYSKGMDLEGKHKSIGKLIDEAMQQLMAD  133
             Y  E+  D D Y +EN+FWV+ +ARW++++        ++K   IG+LID AM  +  +
Sbjct  54   PYADEE--DQDEYLAENIFWVPKEARWQYIND-------NAKKPEIGQLIDKAMIAIEKE  104

Query  134  NESLLGTLPQIYGKDNIDQRRLGELVDLFSSTYFASTKDKKARDLLGEVYEYFLDKFAKA  193
            NESL G LP+ Y++  +D+ +LG+++DLF  T+  +  + + +D+LG VYEYF+ KFA A
Sbjct  105  NESLKGVLPKEYARPALDKEKLGDIIDLF--TFKLGDTESRKQDVLGRVYEYFIAKFASA  162

Query  194  EGKRGGEFYTPQPIVRTLVEILEPTEGRVYDPCCGSGGMFVQAEKFLEATKRDRSNIAVY  253
            EGK +GEFYTP +IV+ LVE++EP  GR+YDPCCGSGGMFVQ+E+F+E  +    +IA+Y
Sbjct  163  EGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIY  222

Query  254  GQELNERTWRMAKMNLAIHAISSSGLGERWGDTFARDIHAGTKMDYIMANPPFNIKDWIR  313
            GQE N  TW++AKMNLAI++I  ++LGER +DTF  D+H G K DYI+ANPPFN  DW +
Sbjct  223  GQESNPTTWKLAKMNLAIRGI-DNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQ  281

Query  314  NE--EDARWKYGVPPAKNANFAWIQHIISKLKDHGEAGVVMANGTMTSQSSGEGEIRKNM  371
            +   +D RW++GVPP  NAN+AWI+H+ISKL  +G AG V+ANG+M++ + +E EIRKN+
Sbjct  282  ERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNL  341

Query  372  VEDDVVSCVIALPAQLFRGTGIPVCVWFFAkdksvgvggsvdrrgEVLLIDARQLGHMID  431
            +E+D+V C+++LP+QLF +T IPVC+WF++  ++ G  G  +R+ E+L+IDAR++GHM+ 
Sbjct  342  IEQDLVECIVTLPGQLFYSTQIPVCLWFIS--NNKGQNGKKERKNEILFIDAREIGHMVS  399

Query  432  RTERAFSDEDIAKIANAFRTWRGRKSAEGEYEDEAGFCKSATIEEIREAGYALTPGRYVG  491
            RT + FSDEDI K+A+++++WRG  + +  YED AGFCK   +EE+++  Y LTPGRYVG
Sbjct  400  RTLKEFSDEDIQKVAQTYHSWRG--TNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVG  457

Query  492  MSEVEDDGEPIDEKIARLTAELTAALDESARLDALVREQLGRL  534
            +++VE+D EP+++K+ R+T+EL+  +  S  L+  +R  L  L
Sbjct  458  LADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

181) Oweho_0002 in NC_016599


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  451 bits (1700),  Expect = 4e-128, Method: Compositional matrix adjust.
 Identities = 270/511 (53%), Positives = 381/511 (75%), Gaps = 16/511 (3%)

Query  13   EEQLWDAANKLRGNVESSEYKHVVLGLIFLKFASDTFEERRQELITEGKEKYLEMKEFYN  72
            EE+LW+AA+KLRG+++++EYK+V LGLIFLK+ SD+FEE+ +EL  +      +  E Y 
Sbjct  7    EEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDE-YL  65

Query  73   MKNVFFLAPESRWSFVMENSKQDNIALIVDTALHTIEKNNTSLKGALPDNYFSRLNLDPS  132
              N+F ++ E+RW ++ +N+K+ +I+ ++D A+ +IEK+N SLKG LP +Y +R  LD  
Sbjct  66   AENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-ARPALDKE  124

Query  133  KLAALLDTIN-NIDTTGDAEEDVVGRIYEYFLgrfaaaegkgggefYTPKCIVNLIAEML  191
            KL+ ++D +  +++ T    +DV+GR+YEYF+++FA+AEGK +GEFYTP  IV+L+ EM+
Sbjct  125  KLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMI  184

Query  192  EPYKGKIYDPACGSGGMFVQSIDFVKSHQGNTKDISIYGQEYTAVTYKLAKMNLAIRGIS  251
            EPYKG+IYDP CGSGGMFVQS  FV  HQG   DI+IYGQE  + T KLAKMNLAIRGI 
Sbjct  185  EPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGID  244

Query  252  ANLGDVPANTFFKDQHPDLKADYIMANPPFNQSQWREKNELEDDSRWAGYTTPPAGNANY  311
             +LG+  A+TF +D H +LKADYI+ANPPFN S+W  ++ L DD RW  +  PP GNANY
Sbjct  245  NDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYRWQ-FGVPPKGNANY  302

Query  312  AWILHMLSKLSETGTAGFVLANGSMSTNTSGEGDIRKQLIENDMVDCMIALPGQLFYTTQ  371
            AWI HM+SKL+  GTAGFVLANGSMST+  +E +IRK+LIE+D+V+C+++LPGQLFY+TQ
Sbjct  303  AWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQ  362

Query  372  IPVCLWFITKNKKEDEAHGYRKRTGETLFIDARNMGSMIDRTQKELTKDDIEHIASTYHN  431
            IPVCLWFI++NK +   +G + R  E LFIDAR++G M+ RT KE++ +DI+ +A TYH+
Sbjct  363  IPVCLWFISNNKGQ---NGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHS  419

Query  432  WRNCPPLEGVPEAGEDYNDIAGYCRSATLQDIQKNDYVLTPGRYVGVAEEEDDGVPFEEK  491
            WR           +  Y+DIAG+C+   L+++++N+Y+LTPGRYVG+A+ E+D  PFE+K
Sbjct  420  WRG--------TNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQK  471

Query  492  MTDLTATLKSQMAEAAELDKAIAENLKLLGY  522
            M  +T+ L  Q A + EL+  I  +L  LGY
Sbjct  472  MKRITSELSEQFAKSKELEDQIRKSLEGLGY  502

182) Isova_0872 in NC_015588


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  451 bits (1699),  Expect = 6e-128, Method: Compositional matrix adjust.
 Identities = 272/549 (50%), Positives = 379/549 (70%), Gaps = 63/549 (11%)

Query  21   LKDTLWKAADKLRGSMDASQYKDVILGLVFLKYVSDAFEERRAAILEECLADGLSEDDAA  80
            + + LW+AADKLRGSMDA++YK+V LGL+FLKYVSD+FEE+   + ++  AD        
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADE-------  58

Query  81   PLLEDVDEYRRAGAFWVPERARWGYLAQHAKGRSATPDEPEASIGQLVDDAMLLLMGSNP  140
               ED DEY     FWVP  ARW Y+ ++AK          + IGQL+D AM+ +   N 
Sbjct  59   ---EDQDEYLAENIFWVPKEARWQYINDNAK---------KPEIGQLIDKAMIAIEKENE  106

Query  141  TLKGTLPTIFNRDSVDQRRLGELVDLFSSARFTGVMADGTKVSKARDVLGEVYEYFLGKF  200
            +LKG LP  + R ++D+ +LG+++DLF+          G   S+ +DVLG VYEYF++KF
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLFT-------FKLGDTESRKQDVLGRVYEYFIAKF  159

Query  201  AAAEGKRGGEFYTPPGVVRVLVEVLEPYRGRVYDPCCGSGGMFVQAEKFLERHGADPQAI  260
            A+AEGK +GEFYTP+++V++LVE++EPY+GR+YDPCCGSGGMFVQ+E+F+E+H +  + I
Sbjct  160  ASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDI  219

Query  261  SVFGQELNERTWRMAKMNLAVHGLTGNLGPRWGDTFARDLHPELQADYVLANPPFNIKDW  320
            +++GQE N  TW++AKMNLA++G+  +LG R +DTF  DLH  L+ADY+LANPPFN  DW
Sbjct  220  AIYGQESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW  279

Query  321  ARNT--DDARWKFGVPPAGNANYAWIQHILSKLAPGGSAGVVMAngsmssnsggegeIRA  378
            +++   DD RW+FGVPP GNANYAWI+H++SKLAP G+AG V+ANGSMS+++ +E EIR 
Sbjct  280  GQERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRK  339

Query  379  QLVEADLVSCMVALPTQLFRSTGIPVCVWFFAKDKG-----ARAGEVLFIDARNLGHMVD  433
            +L+E DLV C+V+LP QLF ST IPVC+WF++++KG      R  E+LFIDAR++GHMV 
Sbjct  340  NLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVS  399

Query  434  RAERALSDDDIAKIADTYHAWKRGpspesepvetlpvvepvetepvetepvvepvettYS  493
            R+ + +SD+DI K+A+TYH+W+                                 +  Y 
Sbjct  400  RTLKEFSDEDIQKVAQTYHSWR------------------------------GTNDKYYE  429

Query  494  DIPGFCYSATLAEIKDAGYALTPGRYVGAAEVEDDGEPIEQKIERLTAELFAQFDESARL  553
            DI+GFC    L E+K+  Y LTPGRYVG A+VE+D EP+EQK+ R+T+EL  QF  S  L
Sbjct  430  DIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKEL  489

Query  554  EQVVREQLG  562
            E+ +R  L 
Sbjct  490  EDQIRKSLE  498

183) BN117_0855 in NC_018828


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  451 bits (1698),  Expect = 7e-128, Method: Compositional matrix adjust.
 Identities = 274/563 (49%), Positives = 395/563 (71%), Gaps = 65/563 (11%)

Query  11   DLEKKLWTAADKLRSNLDAAVYKHVVLGLIFLKYVSDAFeerqrelreqFTNPDHDYYMD  70
            ++E KLW AADKLR+++DAA YK+V LGLIFLKYVSD+F                     
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSF---------------------  43

Query  71   PDEYGGAGTQEYEENIAAELEVRDYYTEKNVFWVPVEARWQTLRDCAQLPPKAALPWNKP  130
             + Y     + Y ++     E +D Y   N+FWVP EARWQ + D A+ P          
Sbjct  44   EEKYKELKQDPYADE-----EDQDEYLAENIFWVPKEARWQYINDNAKKP----------  88

Query  131  GKDEPEEMRSVGWLIDNAMEAVERENARLKNVLNKDFARVQLDSSKLAGLISHFSDTDFA  190
                      +G LID+AM A+E+EN  LK VL K++AR  LD  KL+++I  F+     
Sbjct  89   ---------EIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEKLGDIIDLFT-----  134

Query  191  AREYKGQPLDLKSKDILGHVYEYFLGQFALAEGKKGGQYYTPKSIVTLIVEMLRPFKGRV  250
               +K    + + +D+LG+VYEYF+++FA AEGK++G++YTP SIV L+VEM+ P+KGR+
Sbjct  135  ---FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRI  191

Query  251  YDPAMGSGGFFVQSEEFIEQHGGKAANGKSGQISVYGQESNPTTWRLAAMNMAIRGIDFN  310
            YDP  GSGG FVQSE F+E+H     +G+ ++I++YGQESNPTTW+LA MN+AIRGID +
Sbjct  192  YDPCCGSGGMFVQSERFVEKH-----QGRLDDIAIYGQESNPTTWKLAKMNLAIRGIDND  246

Query  311  FGTGPADTLLNDLHPDLRADFVMANPPFNMKEWWNEKLANDPRWIVGTPPQGNANFAWLQ  370
            +G   ADT+ NDLH +L+AD+++ANPPFN  +W +E+L +D RW  G PP+GNAN+AW++
Sbjct  247  LGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWIE  306

Query  371  HMLHHLAPTGSMALLLANGSMSSNTNNEGEIRKRLIEDDYVECMVALPGQLFTNTQIPAC  430
            HM+  LAP G+ +++LANGSMS++ ++E EIRK LIE+D VEC+V+LPGQLF +TQIP C
Sbjct  307  HMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVC  366

Query  431  IWFLTRDKQNGFALDKKKRDRRGEFLFIDARKMGYMKDRVLRDFTPDDIQKIADTFHAWQ  490
            +WF++ +K      ++ K++R+ E+LFIDAR +G M  R L++F+ +DIQK+A+T+H+W+
Sbjct  367  LWFISNNKG-----QNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWR  421

Query  491  QGEE--YEDVPGFCYSAKLEDVRKHEHVLTPGRYVGAAEQEEDSEPFAEKMERLTTQLAK  548
              ++  YED++GFC   +LE+V+++E +LTPGRYVG A+ EED EPF +KM R+T++L+ 
Sbjct  422  GTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSE  481

Query  549  QFADSAKLEEEIKKNLAGLGYVV  571
            QFA S  LE++I+K+L GLGY V
Sbjct  482  QFAKSKELEDQIRKSLEGLGYGV  504

184) Pnap_4777 in NC_008761


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  450 bits (1695),  Expect = 1e-127, Method: Compositional matrix adjust.
 Identities = 271/513 (53%), Positives = 370/513 (73%), Gaps = 24/513 (4%)

Query  8    TLWATADKLRANMDAAEYKHLVLGLIFVKYISDTFaarraeltarltNPadayyygdaaP  67
             LW +ADKLR++MDAAEYK++ LGLIF+KY+SD+F  +  EL                  
Sbjct  9    KLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKEL-----------------K  51

Query  68   EDIEAELEDRDYYKEVNAFWVPEAARWESLRAAAKQVDIGKRIDDALSLIEAENPTLKGI  127
            +D  A+ ED+D Y   N FWVP  ARW+ +   AK+ +IG+ ID A+  IE EN +LKG+
Sbjct  52   QDPYADEEDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGV  111

Query  128  LDKRYARAQLPDGKLGELVDLISTIGFGDNPSTARDVLGQVYEYFLGMFASAEGKRGGQF  187
            L K YAR+ L   KLG+++DL+ T+ +GD  S  +DVLG+VYEYF++ FASAEGK +G+F
Sbjct  112  LPKEYARPALDKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEF  170

Query  188  YTPASIVKTLVAILGPHSGKVYDPCCGSGGMFVQSEKFIEAHGGKLGDVSIYGQEANPTT  247
            YTP+SIVK LV ++ P  G++YDPCCGSGGMFVQSE+F+E H G+L+D++IYGQE+NPTT
Sbjct  171  YTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTT  230

Query  248  WRLAAMNLAIRGIDFNLGKEPGDTFTRNQHPDLRADFILANPPFNISDWWHGSLMGDARW  307
            W+LA MNLAIRGID +LG   +DTF  + H +L+AD+ILANPPFN SDW +  L++D RW
Sbjct  231  WKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRW  290

Query  308  VHGDPPPGNANYAWLQHMLHHLKPTGRAGIVLANGSMSSSQNSEGQIRaamveadvvevm  367
              G PP GNANYAW++HM+  L P G AG+VLANGSMS+S + E +IR  ++E D+VE +
Sbjct  291  QFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECI  350

Query  368  vaLPGQLFFNTQIPACLWFLVKQKTH-----RKGEVLFIDARKLATMISRVQSEFTDAVI  422
            V+LPGQLF++TQIP CLWF+ ++K +     RK E+LFIDAR ++ M+SR   EF+D  I
Sbjct  351  VTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDI  410

Query  423  ERIAATVAAWRGEADAGEYRDTLGFCRSVKLAEIAQHGHVLTPGRYVGAEAVEDNDEDFA  482
            +++A T  +WRG  D   Y D  GFC+ V+L E+ ++  +LTPGRYVG   VE+++E F 
Sbjct  411  QKVAQTYHSWRGTNDK-YYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFE  469

Query  483  TKMQQLTEKLGEQMARGAELDLLIRQKLGGLGY  515
             KM+++T  L+EQ A++ EL+  IR+ L GLGY
Sbjct  470  QKMKRITSELSEQFAKSKELEDQIRKSLEGLGY  502

185) Bpro_1940 in NC_007948


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  450 bits (1695),  Expect = 1e-127, Method: Compositional matrix adjust.
 Identities = 270/531 (51%), Positives = 376/531 (71%), Gaps = 42/531 (7%)

Query  8    TLWATADKLRANMDAAEYKHLVLGLIFVKYISDTFAARRSEVATRLADPKDEYFFEGATP  67
             LW +ADKLR++MDAAEYK++ LGLIF+KY+SD+F  +  E+       +D Y       
Sbjct  9    KLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKEL------KQDPY-------  55

Query  68   KTLAVELEDRDYYKSVNVFWVPEAARWESLRAAAKQPDIGKRIDEALTLVEVENPKLKGI  127
                 + ED+D Y + N+FWVP  ARW+ +   AK+P+IG+ ID A+  +E EN  LKG+
Sbjct  56   ----ADEEDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGV  111

Query  128  LDKRYARAQLPDGKLGELVDLISTVGFGDNPSVARDILGQVYEYFLGMFASAEGKRGGQF  187
            L K YAR+ L   KLG+++DL+ T  +GD  S  +D+LG+VYEYF++ FASAEGK +G+F
Sbjct  112  LPKEYARPALDKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEF  170

Query  188  YTPASIVKTLVAVLNPHSGKVYDPCCGSGGMFVQSEKFIEAHGGKLGDASIYGQEANPTT  247
            YTP+SIVK LV +++P  G++YDPCCGSGGMFVQSE+F+E H G+L+D +IYGQE+NPTT
Sbjct  171  YTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTT  230

Query  248  WRLAAMNLAIRGIDFNLGREPADTFVRNQHPDLRADFILANPPFNISDWWHASLTGDARW  307
            W+LA MNLAIRGID +LG   ADTF  + H +L+AD+ILANPPFN SDW +  L +D RW
Sbjct  231  WKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRW  290

Query  308  QYGDPPTGNANYAWLQHMLHHLKPTGRAGIVLANGSMSSSQNSEGQIRaamveadvvevm  367
            Q+G PP GNANYAW++HM+  L P G AG+VLANGSMS+S + E +IR  ++E D+VE +
Sbjct  291  QFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECI  350

Query  368  iaLPGQLFFNTQIPACLWFLVKKKTR-----RQGEVLFIDARKLATMISRVQSEFTDEVI  422
            ++LPGQLF++TQIP CLWF+ ++K +     R+ E+LFIDAR ++ M+SR   EF+DE I
Sbjct  351  VTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDI  410

Query  423  ARIANTVAAWRgeslplplglgegegegegspapapYADIPGFCRSVKLKEIAQHGHVLT  482
             ++A+T  +WR                   +     Y DI+GFC+ V+L E+ ++  +LT
Sbjct  411  QKVAQTYHSWR-------------------GTNDKYYEDIAGFCKVVNLEEVKNNEYILT  451

Query  483  PGRYVGAEEVEDNDEDFATKMQQLTEKLGEQMAKGAELDQLIRQKLGGLGY  533
            PGRYVG  +VE+++E F  KM+++T  L+EQ AK+ EL++ IR+ L GLGY
Sbjct  452  PGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGY  502

186) Rfer_0032 in NC_007908


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  450 bits (1695),  Expect = 1e-127, Method: Compositional matrix adjust.
 Identities = 268/538 (50%), Positives = 383/538 (72%), Gaps = 42/538 (7%)

Query  11   NLDKQLWAAADRLRAAVNPSEYMHVVLGLVFLKYISDAFKERRLELQAAFQDPANDYYLG  70
             ++ +LW AAD+LR++++++EY +V LGL+FLKY+SD+F E+  EL+   QDP    Y +
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELK---QDP----YAD  57

Query  71   TDADELIAQELEARDYYTETNVFWVPALARWDFLKDNAKVAIDTVLTVKNGKTFEYKFKG  130
             + ++         +Y +E N+FWVP  ARW++++DNAK +                   
Sbjct  58   EEDQD---------EYLAE-NIFWVPKEARWQYINDNAKKP------------------E  89

Query  131  IGRLLDDALEAVEKDNPKLKGVLDKSYARWRVD-EALPGLIDEFSKIPFNHGALKAKDIL  189
            IG+L+D A+ A+EK+N  LKGVL K YAR  +D E L ++ID F+ + + +   + +D+L
Sbjct  90   IGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEKLGDIIDLFT-FKLGDTESRKQDVL  148

Query  190  GHIYEYFLGEFSIAAGKRGGEFYTPKSIVSVIVEMLEPFEGRVYDPCCGSGGFFVQSERF  249
            G++YEYF++ F+ A GK +GEFYTP SIV ++VEM+EP+ GR+YDPCCGSGG FVQSERF
Sbjct  149  GRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERF  208

Query  250  VLEHGGKIGQLSIYGQEFNPTTWRLASMNMAIRGLDFDFGKEPASTYTRPQHPDLRADFI  309
            V  H G++++++IYGQE NPTTW+LA MN+AIRG+D D+G   A T+    H +L+AD+I
Sbjct  209  VEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYI  268

Query  310  MANPPFNMKAWKEGVKDDDPRWKYGVPPDGNANFAWMQHMIHHLAPHGSMALLLANGSMS  369
            +ANPPFN   W +    DD RW++GVPP GNAN+AW++HMI  LAP+G+ +++LANGSMS
Sbjct  269  LANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMS  328

Query  370  SNTNNEGEIRKALIEADLVECMVALPGQLFTNTQIPACIWFLTrskaerkakrsrHGEVL  429
            ++ ++E EIRK LIE DLVEC+V+LPGQLF +TQIP C+WF++ +K++   K  ++ E+L
Sbjct  329  TSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKN-EIL  387

Query  430  FIDARQLGYMKDRVLRDFKPEDLAKVADTFHAWQRGVG---YADEAGFCKAATLADIGKA  486
            FIDAR++G M  R L++F  ED+ KVA+T+H+W RG     Y D AGFCK   L ++ + 
Sbjct  388  FIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSW-RGTNDKYYEDIAGFCKVVNLEEVKNN  446

Query  487  DYVLTPGRYVGAAAQEADAEPFEDKMARLTAALGDQFKESARLEAAIRKNLAGLGYEV  544
            +Y+LTPGRYVG A  E D EPFE+KM R+T+ L++QF  S  LE  IRK+L GLGY V
Sbjct  447  EYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

187) H650_18285 in NC_021500


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  450 bits (1696),  Expect = 1e-127, Method: Compositional matrix adjust.
 Identities = 269/560 (49%), Positives = 399/560 (72%), Gaps = 65/560 (11%)

Query  12   LDNKFWKAADKLRANMDAANYKHVVLGLIFLKYVSDAFEARQQELITLFRDVGNPDNIYA  71
            +++K+W+AADKLR++MDAA+YK+V LGLIFLKYVSD+FE +       +++         
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEK-------YKE---------  49

Query  72   MSRDDYDSDEDYAQAIVDELEVEDYYTEKNIFWVPKAARWDTLKTKAILPTGTVLWVDET  131
            + +D Y  +ED           +D Y   NIFWVPK ARW+ ++                
Sbjct  50   LKQDPYADEED-----------QDEYLAENIFWVPKEARWQYIN----------------  82

Query  132  TGQDVKLRSVSWLVDNALDEIEKTNPKLKGILNR-ISQYQLGNEVLTGLINTFSDANFSN  190
              ++ K   ++ L+D+A+  IEK N  LKG+L +  ++  L++E L ++I+ F+      
Sbjct  83   --DNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEKLGDIIDLFT------  134

Query  191  PEYNGEKLSLKSKDILGHVYEYFLGQFALAEGKQGGQYYTPKSIVTLIVEMLQPYNGRVY  250
              ++      + +D+LG+VYEYF+++FA AEGK++G++YTP SIV L+VEM++PY+GR+Y
Sbjct  135  --FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIY  192

Query  251  DPAMGSGGFFVSSDRFIEEHAGEKQYNAAEQKRNISVYGQESNPTTWKLAAMNMAIRGID  310
            DP  GSGG FV S+RF+E H G  +        +I++YGQESNPTTWKLA MN+AIRGID
Sbjct  193  DPCCGSGGMFVQSERFVEKHQGRLD--------DIAIYGQESNPTTWKLAKMNLAIRGID  244

Query  311  FNFGSKNADTLLDDQHPDLRADFVMANPPFNMKEWWNAKLENDVRWKYGTPPQGNANFAW  370
             ++G +NADT+ +D H +L+AD+++ANPPFN  +W + +L +D RW++G PP+GNAN+AW
Sbjct  245  NDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAW  304

Query  371  MQHMIHHLAPKGSMALLLANGSMSSNTNNEGEIRRNLIEADLVECMVALPGQLFTNTQIP  430
            ++HMI  LAP+G+ +++LANGSMS++ ++E EIR+NLIE DLVEC+V+LPGQLF +TQIP
Sbjct  305  IEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIP  364

Query  431  ACIWFLTKDKSGGNGKAHRKGEVLFIDARQIGYMKDRVLRDFSREDIAKIAETFHAWQSD  490
             C+WF++++K G NGK +RK E+LFIDAR+IG M  R L++FS EDI K+A+T+H+W++ 
Sbjct  365  VCLWFISNNK-GQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGT  423

Query  491  KD--YEDEAGFCFSATLEDIQKNGFVLTPGRYVGAAEQDEDDEPFAEKMARLTAQLKDQL  548
            +D  YED AGFC    LE++++N ++LTPGRYVG A+ +ED+EPF +KM R+T++L +Q+
Sbjct  424  NDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQF  483

Query  549  EESAKLEAQIKANLGGLGYG  568
              S  LE QI+ +L GLGYG
Sbjct  484  AKSKELEDQIRKSLEGLGYG  503

188) hsdM3 in NC_007146


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  449 bits (1692),  Expect = 2e-127, Method: Compositional matrix adjust.
 Identities = 271/544 (50%), Positives = 385/544 (71%), Gaps = 57/544 (10%)

Query  23   DLDEKLWSSADKLRQQLDAANYKHIVLGLIFLKYISDNFTHQQEKIQAELSDAENPLYLD  82
            +++EKLW +ADKLR  +DAA+YK++ LGLIFLKY+SD+F ++   ++             
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELK-------------  51

Query  83   RTFFDTEEEYQEALTAELENRDYYTADNVFWVPASARWQALQEVSILNTGAELPWGGKFS  142
                  ++ Y +      E++D Y A+N+FWVP  ARWQ +++             +K +
Sbjct  52   ------QDPYADE-----EDQDEYLAENIFWVPKEARWQYIND------------NAKKP  88

Query  143  GVAKLIDDAFDAIEKDNEKLKGVLQRISGYA---VNEDTLRGLIILFSDTNFTRPTYNGE  199
             +++LID A  AIEK+NE LKGVL +   YA   ++ + L ++I LF        T++  
Sbjct  89   EIGQLIDKAMIAIEKENESLKGVLPK--EYARPALDKEKLGDIIDLF--------TFKLG  138

Query  200  PVHLGAKDILGHVYEYFLGRFAQAEGKRGGQYFTPKSIVSLIVEMLEPYSGRVYDPAMGS  259
              +   +D+LG+VYEYF+++FA AEGK +G+++TP SIV L+VEM+EPY GR+YDP  GS
Sbjct  139  DTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGS  198

Query  260  GGFFVQTERFITAHQGNINNVSIYGQEFNPTTWKLAAMNMAIRGIDYDFGKHNADSFTQP  319
            GG FVQ+ERF+  HQG +++++IYGQE NPTTWKLA MN+AIRGID D+G +NAD+F + 
Sbjct  199  GGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGIDNDLGERNADTFHND  258

Query  320  QHIDKKMDFIMANPPFNISDWWSESLADDPRWAYGTPPKGNANFAWLQHMIYHLSPNGKM  379
             H + K D+I+ANPPFN SDW  E L DD RW +G PPKGNAN+AW++HMI  L+PNG  
Sbjct  259  LHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTA  318

Query  380  ALLLANGSMSSQTNNEGEIRKAIINADLVECMVALPGQLFTNTQIPACIWFLNRN-----  434
            +++LANGSMS+  ++E EIRK +I+ DLVEC+V+LPGQLF +TQIP C+WF++ N     
Sbjct  319  GFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNG  378

Query  435  -KKRKGEVLFIDARQIGYMKDRVLRDFTADDIAKIADTLHTWQKSDG--YEDQAAFCKSA  491
             K RK E+LFIDAR+IG M  R L++F+ +DI K+A+T H+W+ +++  YED A+FCK  
Sbjct  379  KKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGTNDKYYEDIAGFCKVV  438

Query  492  TLEEIKDNDFVLTPGRYVGTAEQEDDGVPFAEKMQNLTALLKEQFAKSAELEAEIKKNLG  551
             LEE+K+N+++LTPGRYVG A+ E+D  PF +KM+ +T+ L EQFAKS ELE +I+K+L 
Sbjct  439  NLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLE  498

Query  552  GLGY  555
            GLGY
Sbjct  499  GLGY  502

189) Nwat_1303 in NC_014315


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  449 bits (1691),  Expect = 2e-127, Method: Compositional matrix adjust.
 Identities = 264/563 (47%), Positives = 401/563 (72%), Gaps = 66/563 (11%)

Query  11   ALDDKLWKAADKLRANLDAANYKHVVLGLIFLKYVSDAFEERQEALLERFKDENDDIYYL  70
            ++++KLW+AADKLR+++DAA+YK+V LGLIFLKYVSD+FEE+       +K+       L
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEK-------YKE-------L  50

Query  71   PREDFDSDEDYQQALQEELEILDYYREANVFWVPKAARWSTLKEKAVLPVGTVLWQDDTG  130
             ++ +  +ED     Q+E      Y   N+FWVPK ARW  ++++A  P        + G
Sbjct  51   KQDPYADEED-----QDE------YLAENIFWVPKEARWQYINDNAKKP--------EIG  91

Query  131  HDVKLRSVSWLMDNALEAIEKSNAKLKGILNR-ISQYQLENDKLLGLINTFSDTSFTKPM  189
            +         L+D+A+ AIEK N  LKG+L +  ++  L+++KL ++I+ F+        
Sbjct  92   Q---------LIDKAMIAIEKENESLKGVLPKEYARPALDKEKLGDIIDLFT--------  134

Query  190  FDGEQLDLHSKDILGHVYEYFLGQFALAEGKQGGQYYTPKSIVTLIVAMLEPYSGRVYDP  249
            F   + + + +D+LG+VYEYF+++FA AEGK++G++YTP SIV L+V M+EPY GR+YDP
Sbjct  135  FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDP  194

Query  250  AMGSGGFFVSSDKFIEEHAKEHHYDPSEQKKHISVYGQESNPTTWRLAAMNMAIRGIDFN  309
              GSGG FV S++F+E H          +  +I++YGQESNPTTW+LA MN+AIRGID +
Sbjct  195  CCGSGGMFVQSERFVEKHQ--------GRLDDIAIYGQESNPTTWKLAKMNLAIRGIDND  246

Query  310  FGKKNADTFLDDQHPDLRADFVMANPPFNMKDWWSESLADDARWQYGTPPKGNANFAWMQ  369
            +G +NADTF +D H +L+AD+++ANPPFN  DW  E L DD RWQ+G PPKGNAN+AW++
Sbjct  247  LGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWIE  306

Query  370  HMIHHLAPTGSMALLLANGSMSSHTNNEGGIRQRLVEEDLVECMAALPGQLFTNTQIPAC  429
            HMI  LAP G+ +++LANGSMS+  ++E  IR+ L+E+DLVEC+ +LPGQLF +TQIP C
Sbjct  307  HMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVC  366

Query  430  IWFLTRDKANGLVRNEKKRDRREEFLFIDARNLGFMRDRVLRDFTVDDIAKIADTFHAWQ  489
            +WF++ +K+     ++ K++R++E+LFIDAR++G M  R L++F+ +DI K+A+T+H+W+
Sbjct  367  LWFISNNKG-----QNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWR  421

Query  490  RGEH--YEDVAGFCKSASLDEIKKHDFVLTPGRYVGAREQEDDGEPFAEKMARLTGQLQE  547
              ++  YED+AGFCK  +L+E+K+++++LTPGRYVG  + E+D EPF +KM R+T++L E
Sbjct  422  GTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSE  481

Query  548  QFVESERLEAEIKRNLGRLGYDL  570
            QF  S  LE +I+++L  LGY++
Sbjct  482  QFAKSKELEDQIRKSLEGLGYGV  504

190) PCC21_032490 in NC_018525


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  449 bits (1690),  Expect = 3e-127, Method: Compositional matrix adjust.
 Identities = 269/559 (49%), Positives = 399/559 (72%), Gaps = 65/559 (11%)

Query  12   LDNKFWKAADKLRANMDAANYKHVVLGLIFLKYVSDAFEARQQDLITLFRDVGNPDNIYA  71
            +++K+W+AADKLR++MDAA+YK+V LGLIFLKYVSD+FE +       +++         
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEK-------YKE---------  49

Query  72   MSRDGYDSDEEYAQAIVDELEVEDYYAEKNIFWVPKAARWETLKNKAMLPTGTVLWVDET  131
            + +D Y  +E+           +D Y   NIFWVPK ARW+ ++++A  P          
Sbjct  50   LKQDPYADEED-----------QDEYLAENIFWVPKEARWQYINDNAKKP----------  88

Query  132  TGQDVKLRSVSWLVDNALDEIEKTNPKLKGILNR-ISQYQLGNEVLTGLINTFSDANFSN  190
                     ++ L+D+A+  IEK N  LKG+L +  ++  L++E L ++I+ F+      
Sbjct  89   --------EIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEKLGDIIDLFT------  134

Query  191  PEYNGEKLNLKSKDILGHVYEYFLGQFALAEGKQGGQYYTPKSIVTLIVEMLQPYNGRVY  250
              ++    + + +D+LG+VYEYF+++FA AEGK++G++YTP SIV L+VEM++PY+GR+Y
Sbjct  135  --FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIY  192

Query  251  DPAMGSGGFFVSSDRFIEEHAGEKQYNAAEQKQKISVYGQESNPTTWKLAAMNMAIRGID  310
            DP  GSGG FV S+RF+E H G        + + I++YGQESNPTTWKLA MN+AIRGID
Sbjct  193  DPCCGSGGMFVQSERFVEKHQG--------RLDDIAIYGQESNPTTWKLAKMNLAIRGID  244

Query  311  FNFGSKNADTLLDDQHPDLRADFVMANPPFNMKEWWSAKLENDVRWKYGTPPQGNANFAW  370
             ++G +NADT+ +D H +L+AD+++ANPPFN  +W   +L +D RW++G PP+GNAN+AW
Sbjct  245  NDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAW  304

Query  371  MQHMVHHLAPKGSMALLLANGSMSSNTNNEGEIRRNLIEADLVECMVALPGQLFTNTQIP  430
            ++HM+  LAP+G+ +++LANGSMS++ ++E EIR+NLIE DLVEC+V+LPGQLF +TQIP
Sbjct  305  IEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIP  364

Query  431  ACIWFLTKDKTGGNGKAHRKGEVLFIDARKIGFMKDRVLRDFSREDIAKIADTFHAWQ--  488
             C+WF++++K G NGK +RK E+LFIDAR IG M  R L++FS EDI K+A+T+H+W+  
Sbjct  365  VCLWFISNNK-GQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGT  423

Query  489  MDKEYEDEAGFCFSATLEDIQKNDFVLTPGRYVGAAEQEEDDEPFAEKMARLTAQLKDQL  548
             DK YED AGFC    LE++++N+++LTPGRYVG A+ EED+EPF +KM R+T++L +Q+
Sbjct  424  NDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQF  483

Query  549  EDSAKLEEQIKANLGGLGY  567
              S  LE+QI+ +L GLGY
Sbjct  484  AKSKELEDQIRKSLEGLGY  502

191) DIP2314 in NC_002935


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  448 bits (1688),  Expect = 4e-127, Method: Compositional matrix adjust.
 Identities = 259/523 (50%), Positives = 389/523 (75%), Gaps = 26/523 (4%)

Query  14   TSKEIKDTLWKSADKLRGSMDASQYKDVALGLVFLKYVSDSFEERQKEIRAELEGKGFDE  73
            ++  + + LW++ADKLRGSMDA++YK+VALGL+FLKYVSDSFEE+ KE++ +     + +
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQD----PYAD  57

Query  74   EYILEDLADVDAYTSENVFWVASNARWDFLKKYSKGMDLEGKHKSIGKLIDEAMQQLMAD  133
            E       D D Y +EN+FWV+ +ARW++++        ++K   IG+LID AM  +  +
Sbjct  58   E------EDQDEYLAENIFWVPKEARWQYIND-------NAKKPEIGQLIDKAMIAIEKE  104

Query  134  NESLLGTLPQIYGKDNIDQRRLGELVDLFSSTYFASTKDKKARDLLGEVYEYFLDKFAKA  193
            NESL G LP+ Y++  +D+ +LG+++DLF  T+  +  + + +D+LG VYEYF+ KFA A
Sbjct  105  NESLKGVLPKEYARPALDKEKLGDIIDLF--TFKLGDTESRKQDVLGRVYEYFIAKFASA  162

Query  194  EGKRGGEFYTPQPVVRTLVEILEPTEGRVYDPCCGSGGMFVQAEKFLEVTKRDRSNIAVY  253
            EGK +GEFYTP ++V+ LVE++EP  GR+YDPCCGSGGMFVQ+E+F+E  +    +IA+Y
Sbjct  163  EGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIY  222

Query  254  GQELNERTWRMAKMNLAIHAISSSGLGERWGDTFARDIHAGTKMDYIMANPPFNIKDWIR  313
            GQE N  TW++AKMNLAI++I  ++LGER +DTF  D+H G K DYI+ANPPFN  DW +
Sbjct  223  GQESNPTTWKLAKMNLAIRGI-DNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQ  281

Query  314  NE--EDARWKYGVPPAKNANFAWIQHIISKLKDHGEAGVVMANGTMTSQSSGEGEIRKNM  371
            +   +D RW++GVPP  NAN+AWI+H+ISKL  +G AG V+ANG+M++ + +E EIRKN+
Sbjct  282  ERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNL  341

Query  372  VEDDVVSCVIALPAQLFRGTGIPVCVWFFAKDKSAGVGGSVDRRGEVLLIDARQLGHMID  431
            +E+D+V C+++LP+QLF +T IPVC+WF++++K  G  G  +R+ E+L+IDAR++GHM+ 
Sbjct  342  IEQDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVS  399

Query  432  RTERAFSDEDITKIANAFRTWRGRKSAEGEYEDEAGFCKSATIEEIREAGYALTPGRYVG  491
            RT + FSDEDI K+A+++++WRG  + +  YED AGFCK   +EE+++  Y LTPGRYVG
Sbjct  400  RTLKEFSDEDIQKVAQTYHSWRG--TNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVG  457

Query  492  MpeaeeddepidekiaRLTAELTAALDESARLDAVVREQLGRL  534
            +++ EED+EP+++K+ R+T+EL+  +  S  L+  +R  L  L
Sbjct  458  LADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

192) CDBH8_2312 in NC_016800


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  448 bits (1687),  Expect = 5e-127, Method: Compositional matrix adjust.
 Identities = 259/523 (50%), Positives = 389/523 (75%), Gaps = 26/523 (4%)

Query  14   TSKEIKDTLWKSADKLRGSMDASQYKDVALGLVFLKYVSDSFEERQKEIRAELEGKGFDE  73
            ++  + + LW++ADKLRGSMDA++YK+VALGL+FLKYVSDSFEE+ KE++ +     + +
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQD----PYAD  57

Query  74   EDILEDLADVDAYTSENVFWVASNARWDFLKKYSKGMELEGKHKSIGKLIDEAMQQLMTD  133
            E+      D D Y +EN+FWV+ +ARW++++        ++K   IG+LID AM  +  +
Sbjct  58   EE------DQDEYLAENIFWVPKEARWQYIND-------NAKKPEIGQLIDKAMIAIEKE  104

Query  134  NESLLGTLPQIYGKDNIDQRRLGELVDLFSSTYFASTKDKKARDLLGEVYEYFLDKFAKA  193
            NESL G LP+ Y++  +D+ +LG+++DLF  T+  +  + + +D+LG VYEYF+ KFA A
Sbjct  105  NESLKGVLPKEYARPALDKEKLGDIIDLF--TFKLGDTESRKQDVLGRVYEYFIAKFASA  162

Query  194  EGKRGGEFYTPQPVVRTLVEILEPTEGRVYDPCCGSGGMFVQAEKFLEATKRDRSNIAVY  253
            EGK +GEFYTP ++V+ LVE++EP  GR+YDPCCGSGGMFVQ+E+F+E  +    +IA+Y
Sbjct  163  EGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIY  222

Query  254  GQELNERTWRMAKMNLAIHAISSSGLGERWGDTFARDIHAGTKMDYIMANPPFNIKDWIC  313
            GQE N  TW++AKMNLAI++I  ++LGER +DTF  D+H G K DYI+ANPPFN  DW  
Sbjct  223  GQESNPTTWKLAKMNLAIRGI-DNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQ  281

Query  314  NE--EDARWKYGVPPAKNANFAWMQHIISKLKDHGEAGVVMANGTMTSQSSGEGEIRKNM  371
            +   +D RW++GVPP  NAN+AW++H+ISKL  +G AG V+ANG+M++ + +E EIRKN+
Sbjct  282  ERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNL  341

Query  372  VEDDVVSCVIALPAQLFRGTGIPVCVWFFAKDKSAGAGGSVDRRGEVLLIDARQLGHMID  431
            +E+D+V C+++LP+QLF +T IPVC+WF++++K  G  G  +R+ E+L+IDAR++GHM+ 
Sbjct  342  IEQDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVS  399

Query  432  RTERAFSDEDIAKIANAFRTWRGRKSADGEYEDEAGFCKSATIEEIREAGYALTPGRYVG  491
            RT + FSDEDI K+A+++++WRG  + D  YED AGFCK   +EE+++  Y LTPGRYVG
Sbjct  400  RTLKEFSDEDIQKVAQTYHSWRG--TNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVG  457

Query  492  MpeaeeddepidekiaRLTAELTAALDESARLDAVVREQLGRL  534
            +++ EED+EP+++K+ R+T+EL+  +  S  L+  +R  L  L
Sbjct  458  LADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

193) CFSAN002050_05885 in NC_021818


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  448 bits (1687),  Expect = 5e-127, Method: Compositional matrix adjust.
 Identities = 266/561 (48%), Positives = 400/561 (72%), Gaps = 65/561 (11%)

Query  11   DLDNKFWKAADKLRANMDAANYKHVVLGLIFLKYVSDAFEARQQELITLFRDVGNPDNIY  70
            ++++K+W+AADKLR++MDAA+YK+V LGLIFLKYVSD+FE +       +++        
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEK-------YKE--------  49

Query  71   AMSRDDYDSDEDYAQAIVDELEIEDYYTEKNIFWVPKAARWDTLKTKAMLPTGTVLWVDE  130
             + +D Y  +ED           +D Y   NIFWVPK ARW+ ++ +A  P         
Sbjct  50   -LKQDPYADEED-----------QDEYLAENIFWVPKEARWQYINDNAKKP---------  88

Query  131  TTGQDVKLRSVSWLVDNALDEIEKTNPKLKGILNR-ISQYQLGNEVLTGLINTFSDANFS  189
                      ++ L+D+A+  IEK N  LKG+L +  ++  L++E L ++I+ F+     
Sbjct  89   ---------EIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEKLGDIIDLFT-----  134

Query  190  NPEYNGEKLSLKSKDILGHVYEYFLGQFALAEGKQGGQYYTPKSIVTLIVEMLQPYNGRV  249
               ++      + +D+LG+VYEYF+++FA AEGK++G++YTP SIV L+VEM++PY+GR+
Sbjct  135  ---FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRI  191

Query  250  YDPAMGSGGFFVSSDRFIEEHAGEKQYNAAEQKRNISVYGQESNPTTWKLAAMNMAIRGI  309
            YDP  GSGG FV S+RF+E H G  +        +I++YGQESNPTTWKLA MN+AIRGI
Sbjct  192  YDPCCGSGGMFVQSERFVEKHQGRLD--------DIAIYGQESNPTTWKLAKMNLAIRGI  243

Query  310  DFNFGSKNADTLLDDQHPDLRADFVMANPPFNMKEWWNAKLENDVRWKYGTPPQGNANFA  369
            D ++G +NADT+ +D H +L+AD+++ANPPFN  +W + +L +D RW++G PP+GNAN+A
Sbjct  244  DNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYA  303

Query  370  WMQHMIHHLAPKGSMALLLANGSMSSNTNNEGEIRRNLIEADLVECMVALPGQLFTNTQI  429
            W++HMI  LAP+G+ +++LANGSMS++ ++E EIR+NLIE DLVEC+V+LPGQLF +TQI
Sbjct  304  WIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQI  363

Query  430  PACIWFLTKDKSGGNGKAHRKGEVLFIDARQIGYMKDRVLRDFTREDIARIAETFHAWQT  489
            P C+WF++++K G NGK +RK E+LFIDAR+IG M  R L++F+ EDI ++A+T+H+W+ 
Sbjct  364  PVCLWFISNNK-GQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRG  422

Query  490  DKE--YEDEAGFCFSATLEDIQKNDFVLTPGRYVGAAEQDDDDESFAEKMARLTSQLKEQ  547
             ++  YED AGFC    LE++++N+++LTPGRYVG A+ ++D+E+F +KM R+TS+L EQ
Sbjct  423  TNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQ  482

Query  548  LEESAKLEAQIKANLGGLGYD  568
            +  S  LE QI+ +L GLGY+
Sbjct  483  FAKSKELEDQIRKSLEGLGYG  503

194) PARA_15900 in NC_015964


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  448 bits (1686),  Expect = 6e-127, Method: Compositional matrix adjust.
 Identities = 276/544 (51%), Positives = 386/544 (71%), Gaps = 57/544 (10%)

Query  23   DLDEKLWSSADKLRQQLDAANYKHIVLGLIFLKYISDSFTHQQEKIQAELSDPENPLYLD  82
            +++EKLW +ADKLR  +DAA+YK++ LGLIFLKY+SDSF   +EK +    DP       
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSF---EEKYKELKQDP-------  54

Query  83   RTFYDTDEEYQealaaeleNRDYYTADNVFWVPQQARWDEIKAVSILNIGAELPWGGKFS  142
               Y  +E+           +D Y A+N+FWVP++ARW+ I+              +K +
Sbjct  55   ---YADEED-----------QDEYLAENIFWVPKEARWQYIND------------NAKKP  88

Query  143  GVAKLIDDAFDAIEKDNEKLKGVLQRISGYA---VNEDTLRGLIILFSDTHFTRPTYNGE  199
             +++LID A  AIEK+NE LKGVL +   YA   ++ + L ++I LF        T++  
Sbjct  89   EIGQLIDKAMIAIEKENESLKGVLPK--EYARPALDKEKLGDIIDLF--------TFKLG  138

Query  200  PVHLGAKDILGHVYEYFLGRFAQAEGKRGGQYFTPKSIVSLIVEMLEPYSGRVYDPAMGS  259
              +   +D+LG+VYEYF+++FA AEGK +G+++TP SIV L+VEM+EPY GR+YDP  GS
Sbjct  139  DTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGS  198

Query  260  GGFFVQTERFITAHQGNINNVSIYGQEFNPTTWKLAAMNMAIRGIDYDFGKHNADSFTQP  319
            GG FVQ+ERF+  HQG +++++IYGQE NPTTWKLA MN+AIRGID D+G +NAD+F + 
Sbjct  199  GGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGIDNDLGERNADTFHND  258

Query  320  QHIDKKMDFIMANPPFNISDWWSESLADDPRWAYGTPPKGNANFAWLQHMIYHLSPNGKM  379
             H + K D+I+ANPPFN SDW  E L DD RW +G PPKGNAN+AW++HMI  L+PNG  
Sbjct  259  LHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTA  318

Query  380  ALLLANGSMSSQTNNEGEIRKAIINADLVECMVALPGQLFTNTQIPACIWFLNRNKA---  436
            +++LANGSMS+  ++E EIRK +I+ DLVEC+V+LPGQLF +TQIP C+WF++ NK+   
Sbjct  319  GFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNG  378

Query  437  ---RKGEVLFIDARQIGYMKDRVLRDFTADDIAKIADTLHAWQQSDG--YEDQAAFCKSA  491
               RK E+LFIDAR+IG M  R L++F+ +DI K+A+T H+W+ +++  YED A+FCK  
Sbjct  379  KKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGTNDKYYEDIAGFCKVV  438

Query  492  SLEEIASKEYVLTPGRYVGTAEQEDDGVPFAEKMQNLTDLLKEQFAKSAELEAEIKKNLG  551
            +LEE+ ++EY+LTPGRYVG A+ E+D  PF +KM+ +T  L EQFAKS ELE +I+K+L 
Sbjct  439  NLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLE  498

Query  552  GLGY  555
            GLGY
Sbjct  499  GLGY  502

195) ESA_00614 in NC_009778


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  448 bits (1687),  Expect = 6e-127, Method: Compositional matrix adjust.
 Identities = 268/559 (48%), Positives = 397/559 (72%), Gaps = 65/559 (11%)

Query  12   LDNKFWKAADKLRANMDAANYKHVVLGLIFLKYVSDAFEARQQELMTLFRDVGNPDNIYA  71
            +++K+W+AADKLR++MDAA+YK+V LGLIFLKYVSD+FE + +EL               
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELK--------------  51

Query  72   ISRDDYSSDEEYAQALLDELEVEDYYTEKNVFWVPKAARWETLKNKAMLPTGTVLWVDET  131
              +D Y+ +E+           +D Y   N+FWVPK ARW+ ++++A  P          
Sbjct  52   --QDPYADEED-----------QDEYLAENIFWVPKEARWQYINDNAKKP----------  88

Query  132  TGQDVKLRSVSWLVDNALDEIEKTNPKLKGILNR-ISQYQLGNEVLTGLINTFSDANFSN  190
                     ++ L+D+A+  IEK N  LKG+L +  ++  L++E L ++I+ F+      
Sbjct  89   --------EIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEKLGDIIDLFT------  134

Query  191  PEYNGEKLSLKSKDILGHVYEYFLGQFALAEGKQGGQYYTPKSIVTLIVEMLQPYNGRVY  250
              ++      + +D+LG+VYEYF+++FA AEGK++G++YTP SIV L+VEM++PY+GR+Y
Sbjct  135  --FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIY  192

Query  251  DPAMGSGGFFVSSDRFIEEHAGEKHYNAAEQKQKISVYGQESNPTTWRLAAMNMAIRGID  310
            DP  GSGG FV S+RF+E H G        + + I++YGQESNPTTW+LA MN+AIRGID
Sbjct  193  DPCCGSGGMFVQSERFVEKHQG--------RLDDIAIYGQESNPTTWKLAKMNLAIRGID  244

Query  311  FNFGTKNADTLLDDQHPDLRADFVMANPPFNMKEWWSAKLENDVRWKYGTPPQGNANFAW  370
             ++G +NADT+ +D H +L+AD+++ANPPFN  +W   +L +D RW++G PP+GNAN+AW
Sbjct  245  NDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAW  304

Query  371  MQHMIHHLAPKGSMALLLANGSMSSNTNNEGEIRRNLIEADLVECMVALPGQLFTNTQIP  430
            ++HMI  LAP+G+ +++LANGSMS++ ++E EIR+NLIE DLVEC+V+LPGQLF +TQIP
Sbjct  305  IEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIP  364

Query  431  ACIWFLTKDKTGGNGKAHRKGEVLFIDARKIGFMKDRVLRDFTREDIAKIADTFHKWQAD  490
             C+WF++++K G NGK +RK E+LFIDAR IG M  R L++F+ EDI K+A+T+H W++ 
Sbjct  365  VCLWFISNNK-GQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGT  423

Query  491  KD--YEDEAGFCFSATLEDIQKNDFVLTPGRYVGAAEQEEDDEPFAEKMARLTAQLKDQL  548
            +D  YED AGFC    LE++++N+++LTPGRYVG A+ EED+EPF +KM R+T++L +Q+
Sbjct  424  NDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQF  483

Query  549  EESAKLEAQIKANLGGLGY  567
              S  LE QI+ +L GLGY
Sbjct  484  AKSKELEDQIRKSLEGLGY  502

196) hsdM1 in NC_022356


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  448 bits (1686),  Expect = 7e-127, Method: Compositional matrix adjust.
 Identities = 271/548 (50%), Positives = 384/548 (71%), Gaps = 62/548 (11%)

Query  39   LDEKLWSSADKLRQQLDAANYKHIVLGLIFLKYISDNFTHQQEKIQAELSTPENPLYLDR  98
            ++EKLW +ADKLR  +DAA+YK++ LGLIFLKY+SD+F ++   ++              
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELK--------------  51

Query  99   TFFDTEEEYQEALTAELENRDYYTADNVFWVPASARWQALQEVSILNTGAELPWNIGKER  158
                 ++ Y +      E++D Y A+N+FWVP  ARWQ +                 ++ 
Sbjct  52   -----QDPYADE-----EDQDEYLAENIFWVPKEARWQYI-----------------NDN  84

Query  159  GKFSGVAKLIDDAFDAIEKDNEKLKGVLQRISGY---AVNEDTLRGLIILFSDTNFTRPT  215
            +K + +++LID A  AIEK+NE LKGVL +   Y   A++ + L ++I LF        T
Sbjct  85   AKKPEIGQLIDKAMIAIEKENESLKGVLPK--EYARPALDKEKLGDIIDLF--------T  134

Query  216  YNGEPVHLGAKDILGHVYEYFLGRFAQAEGKRGGQYFTPKSIVSLIVEMLEPYSGRVYDP  275
            ++    +   +D+LG+VYEYF+++FA AEGK +G+++TP SIV L+VEM+EPY GR+YDP
Sbjct  135  FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDP  194

Query  276  AMGSGGFFVQTERFISAHQGNINNVSIYGQEFNPTTWKLAAMNMAIRGIDYDFGKHNADS  335
              GSGG FVQ+ERF+  HQG +++++IYGQE NPTTWKLA MN+AIRGID D+G +NAD+
Sbjct  195  CCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGIDNDLGERNADT  254

Query  336  FTQPQHIDKKMDFIMANPPFNISDWWSESLADDPRWAYGTPPKGNANFAWLQHMIYHLSP  395
            F +  H + K D+I+ANPPFN SDW  E L DD RW +G PPKGNAN+AW++HMI  L+P
Sbjct  255  FHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWIEHMISKLAP  314

Query  396  NGKMALLLANGSMSSQTNNEGEIRKAIINADLVECMVALPGQLFTNTQIPACIWFLNRN-  454
            NG  +++LANGSMS+  ++E EIRK +I+ DLVEC+V+LPGQLF +TQIP C+WF++ N 
Sbjct  315  NGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNK  374

Query  455  -----KKRKGEVLFIDARQIGYMKDRVLRDFTADDIAKIANTLHAWQKSDG--YEDQAAF  507
                 K RK E+LFIDAR+IG M  R L++F+ +DI K+A+T H+W+ +++  YED A+F
Sbjct  375  GQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGTNDKYYEDIAGF  434

Query  508  CKSTTLEEIKDNDFVLTPGRYVGTAEQEDDGVPFAEKMQNLTALLKEQFAKSAELEAEIK  567
            CK   LEE+K+N+++LTPGRYVG A+ E+D  PF +KM+ +T+ L EQFAKS ELE +I+
Sbjct  435  CKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIR  494

Query  568  KNLGGLGY  575
            K+L GLGY
Sbjct  495  KSLEGLGY  502

197) hsdM3 in NC_014920


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  447 bits (1684),  Expect = 1e-126, Method: Compositional matrix adjust.
 Identities = 271/543 (50%), Positives = 384/543 (71%), Gaps = 57/543 (10%)

Query  54   LDEKLWASADKLRQQLDAANYKHIVLGLIFLKYISDSFTHQQEKIQAELTDPENVLYLDR  113
            ++EKLW +ADKLR  +DAA+YK++ LGLIFLKY+SDSF ++   ++              
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELK--------------  51

Query  114  TFYDTEEKYQDALTAELENRDYYTADNVFWVPASARWQALQEVSILNTGAELPWGGKFSG  173
                 ++ Y D      E++D Y A+N+FWVP  ARWQ +++             +K + 
Sbjct  52   -----QDPYADE-----EDQDEYLAENIFWVPKEARWQYIND------------NAKKPE  89

Query  174  VAKLIDDAFDAIEKDNEKLKGVLQRISGY---AVNEDTLRGLIILFSDTHFTRPTYNGEP  230
            +++LID A  AIEK+NE LKGVL +   Y   A++ + L ++I LF        T++   
Sbjct  90   IGQLIDKAMIAIEKENESLKGVLPK--EYARPALDKEKLGDIIDLF--------TFKLGD  139

Query  231  VHLGAKDILGHVYEYFLGRFAQAEGKRGGQYFTPKSIVSLIVEMLEPYSGRVYDPAMGSG  290
             +   +D+LG+VYEYF+++FA AEGK +G+++TP SIV L+VEM+EPY GR+YDP  GSG
Sbjct  140  TESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSG  199

Query  291  GFFVQTERFITAHQGNINNMSIYGQEFNPTTWKLAAMNMAIRGIDYDFGKHNADSFTQPQ  350
            G FVQ+ERF+  HQG +++++IYGQE NPTTWKLA MN+AIRGID D+G +NAD+F +  
Sbjct  200  GMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDL  259

Query  351  HIDKKMDFIMANPPFNISDWWSESLADDPRWAYGTPPKGNANFAWLQHMIYHLSPNGKMA  410
            H + K D+I+ANPPFN SDW  E L DD RW +G PPKGNAN+AW++HMI  L+PNG  +
Sbjct  260  HKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAG  319

Query  411  LLLANGSMSSQTNNEGEIHKGIINADLVECMVALPGQLFTNTQIPACIWFLNRN------  464
            ++LANGSMS+  ++E EI+K +I+ DLVEC+V+LPGQLF +TQIP C+WF++ N      
Sbjct  320  FVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNGK  379

Query  465  KKRKGEVLFIDARQIGYMKDRVLRDFTADDIAKISDTLHAWQKSDG--YEDQAAFCKSAT  522
            K RK E+LFIDAR+IG M  R L++F+ +DI K+++T H+W+ +++  YED A+FCK   
Sbjct  380  KERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGTNDKYYEDIAGFCKVVN  439

Query  523  LEEIKDNDFVLTPGRYVGTAEQEDDGVPFAEKMQNLTALLKEQFAKSAELEAEIKKNLGG  582
            LEE+K+N+++LTPGRYVG A+ E+D  PF +KM+ +T+ L EQFAKS ELE +I+K+L G
Sbjct  440  LEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEG  499

Query  583  LGY  585
            LGY
Sbjct  500  LGY  502

198) Shewana3_4240 in NC_008573


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  447 bits (1685),  Expect = 8e-127, Method: Compositional matrix adjust.
 Identities = 263/557 (48%), Positives = 394/557 (71%), Gaps = 57/557 (10%)

Query  11   DLEKKLWNAADKLRATLDASQYKHAVLGLIFVKYVSDAFSMRQEEIKADLTNPEHEYYLD  70
            ++E KLW+AADKLR+++DA++YK+  LGLIF+KYVSD+F  +  E+K D    E++    
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEED----  60

Query  71   PADFSedelaeeiaaeleVRDFYTEKNVFWLPTESRWKFLQDNGPMVIGGADLVIDGKTK  130
                               +D Y   N+FW+P E+RW++++DN+                
Sbjct  61   -------------------QDEYLAENIFWVPKEARWQYINDNA----------------  85

Query  131  KITSVGHLIDNALEGIERDNQKLKGVLNKHYASLKIDQAKLNELINLIATIPFNHKSLNS  190
            K   +G+LID+A+ +IE++N+ LKGVL K+YA   +D+ KL ++I+L+ T+ + +     
Sbjct  86   KKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEKLGDIIDLF-TFKLGDTESRK  144

Query  191  KDILGHIYEYFLGQFALAEGKKGGQFYTPASIVSLIVEMIEPFEGRVYDPAMGSGGFFVQ  250
            +D+LG++YEYF+++FA AEGK++G+FYTP+SIV L+VEMIEP+ GR+YDP  GSGG FVQ
Sbjct  145  QDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQ  204

Query  251  SEKFIERRANQKEIDPLTQKQRISIYGQEYNYTTWQLAAMNMAIRGLDYDFGKEPASTYT  310
            SE+F+E++  + +         I+IYGQE N TTW+LA MN+AIRG+D D+G   A T+ 
Sbjct  205  SERFVEKHQGRLD--------DIAIYGQESNPTTWKLAKMNLAIRGIDNDLGERNADTFH  256

Query  311  NDQHPDLRADFIMANPPFNMKEWNTGVDDNDPRWVYGTPPSGNANFAWMQHMLYHLAPDG  370
            ND H +L+AD+I+ANPPFN  +W      +D RW +G PP GNAN+AW++HM+  LAP+G
Sbjct  257  NDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNG  316

Query  371  SQALLLANGSMSSTTNNEGEIRAALVENDLVECMVALPGQLFTNTQIPACIWFLAKNKKA  430
            + +++LANGSMS++ ++E EIR  L+E+DLVEC+V+LPGQLF +TQIP C+WF+++NK  
Sbjct  317  TAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNK--  374

Query  431  RTDKSGRKLRDRKGEVLFIDARNLGYMKDRVLRDFTQDDIQKVADLYHAWKTGAEVNGIA  490
              +++G+K  +RK E+LFIDAR++G M  R L++F+++DIQKVA+ YH+W+   +     
Sbjct  375  --GQNGKK--ERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGTNDKY---  427

Query  491  YEDQAGFCKSATLEEIKKHDFVLTPGRYVGATEELDDGIPFGEKMATLTSKLSDQFAESA  550
            YED AGFCK   LEE+K+++++LTPGRYVG ++  +D  PF +KM  +TS LS+QFA S 
Sbjct  428  YEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSK  487

Query  551  TLEAEIKKNLAGLGYDL  567
             LE +I+K+L GLGY++
Sbjct  488  ELEDQIRKSLEGLGYGV  504

199) Ser39006_0957 in NC_022268


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  447 bits (1684),  Expect = 9e-127, Method: Compositional matrix adjust.
 Identities = 269/559 (49%), Positives = 401/559 (72%), Gaps = 64/559 (11%)

Query  12   LDNKFWKAADKLRSNMDAANYKHVVLGLIFLKYVSDAFEARQQELLTLFRDIGNPDNIYA  71
            +++K+W+AADKLR++MDAA+YK+V LGLIFLKYVSD+FE +       +++         
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEK-------YKE---------  49

Query  72   MSRDDFATDEEYARAIQAELEVEDYYIEKNVFWVPKAARWDMLKSKATLPVGTVLWVDKT  131
            + +D +A +E+           +D Y+  N+FWVPK ARW+ ++ +A  P          
Sbjct  50   LKQDPYADEED-----------QDEYLAENIFWVPKEARWQYINDNAKKP----------  88

Query  132  GQEVVLRSVSWLIDNALDKIEESNEKLKGILNR-ISQYQLSNDVLIGLINTFSDANFSNP  190
                    ++ LID+A+  IE  NE LKG+L +  ++  L ++ L ++I+ F+   F   
Sbjct  89   -------EIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEKLGDIIDLFT---FKLG  138

Query  191  EYNGQKLQLKSKDILGHVYEYFLGQFALAEGKQGGQYYTPKSIVTLIVEMLQPYKGRVYD  250
            + +++K     +D+LG+VYEYF+++FA AEGK++G++YTP SIV L+VEM++PYKGR+YD
Sbjct  139  DTESRK-----QDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYD  193

Query  251  PAMGSGGFFVSSDRFIEEHAGEKHYNAAEQKRNISVYGQESNPTTWKLAAMNMAIRGIDF  310
            P  GSGG FV S+RF+E H G        +  +I++YGQESNPTTWKLA MN+AIRGID 
Sbjct  194  PCCGSGGMFVQSERFVEKHQG--------RLDDIAIYGQESNPTTWKLAKMNLAIRGIDN  245

Query  311  NFGKKNADTLLDDQHPDLRADFVMANPPFNMKEWWSAKLENDARWKYGTPPQGNANFAWM  370
            ++G +NADT+ +D H +L+AD+++ANPPFN  +W   +L +D RW++G PP+GNAN+AW+
Sbjct  246  DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWI  305

Query  371  QHMIHHLAPKGSMALLLANGSMSSNTNNEGDIRRNLIEADLVECMVALPGQLFTNTQIPA  430
            +HMI  LAP+G+ +++LANGSMS++ ++E +IR+NLIE DLVEC+V+LPGQLF +TQIP 
Sbjct  306  EHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPV  365

Query  431  CIWLLTKDKTGGNGKAHRKGEVLFIDARQIGFMRDRVLRDFTDKDIEKIADTFHAWQEDK  490
            C+W+++++K G NGK +RK E+LFIDAR+IG M  R L++F+D DI+K+A+T+H+W+  +
Sbjct  366  CLWFISNNK-GQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGTN  424

Query  491  D--YHDDAGFCFAATLEDIKKNDFVLTPGRYVGATEQEEDAEPFAEKMARLTQQLKVQLE  548
            D  Y+D AGFC    LE++K+N+++LTPGRYVG ++ EED EPF +KM R+T +L  Q+ 
Sbjct  425  DKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFA  484

Query  549  ESAELEKQIKANLGGLGYG  567
             S ELE QI+ +L GLGYG
Sbjct  485  KSKELEDQIRKSLEGLGYG  503

200) CGSHiGG_01525 in NC_009567


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  446 bits (1680),  Expect = 2e-126, Method: Compositional matrix adjust.
 Identities = 273/543 (51%), Positives = 383/543 (71%), Gaps = 57/543 (10%)

Query  26   LDEKLWASADKLRQQLDAANYKHIVLGLIFLKYISDSFTHQQEKIQAELSTPENPLYLDR  85
            ++EKLW +ADKLR  +DAA+YK++ LGLIFLKY+SDSF ++   ++              
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELK--------------  51

Query  86   TFFDTEEEYQEALTAELENRDYYTADNVFWVPVSARWQALQEVSILNTGAELPWGGKFSG  145
                 ++ Y +      E++D Y A+N+FWVP  ARWQ +++             +K + 
Sbjct  52   -----QDPYADE-----EDQDEYLAENIFWVPKEARWQYIND------------NAKKPE  89

Query  146  VAKLIDDAFDAIEKDNEKLKGVLQRISGY---AVNEDTLRGLIILFSDTNFTRPTYNGEP  202
            +++LID A  AIEK+NE LKGVL +   Y   A++ + L ++I LF        T++   
Sbjct  90   IGQLIDKAMIAIEKENESLKGVLPK--EYARPALDKEKLGDIIDLF--------TFKLGD  139

Query  203  VHLGAKDILGHVYEYFLGRFAQAEGKRGGQYFTPKSIVSLIVEMLEPYSGRVYDPAMGSG  262
             +   +D+LG+VYEYF+++FA AEGK +G+++TP SIV L+VEM+EPY GR+YDP  GSG
Sbjct  140  TESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSG  199

Query  263  GFFVQTERFITAHQGNINNVSIYGQEFNPTTWKLAAMNMAIRGIDYDFGKYNADSFTQPQ  322
            G FVQ+ERF+  HQG +++++IYGQE NPTTWKLA MN+AIRGID D+G  NAD+F +  
Sbjct  200  GMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDL  259

Query  323  HIDKKMDFIMANPPFNISDWWSESLADDPRWAYGTPPKGNANYAWIQHMIYHLSPNGKMA  382
            H + K D+I+ANPPFN SDW  E L DD RW +G PPKGNANYAWI+HMI  L+PNG  +
Sbjct  260  HKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAG  319

Query  383  LLLANGSMSSQTNNEGEIRKAIINADLIECMVALPGQLFTNTQIPACIWFL------NCN  436
            ++LANGSMS+  ++E EIRK +I+ DL+EC+V+LPGQLF +TQIP C+WF+      N +
Sbjct  320  FVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNGK  379

Query  437  KKRKGEVLFIDARQIGYMKDRVLRDFTADDIAKIANTLHAWQTSDG--YEDQAAFCKSAT  494
            K RK E+LFIDAR+IG M  R L++F+ +DI K+A+T H+W+ +++  YED A+FCK   
Sbjct  380  KERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGTNDKYYEDIAGFCKVVN  439

Query  495  LEEIKDNDFVLTPGRYVGTAEQEDDGVPFAEKMQNLTALLKEQFAKSAELEAEIKKNLGG  554
            LEE+K+N+++LTPGRYVG A+ E+D  PF +KM+ +T+ L EQFAKS ELE +I+K+L G
Sbjct  440  LEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEG  499

Query  555  LGY  557
            LGY
Sbjct  500  LGY  502

201) hsdM in NC_017080


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  446 bits (1681),  Expect = 2e-126, Method: Compositional matrix adjust.
 Identities = 259/530 (49%), Positives = 377/530 (72%), Gaps = 43/530 (8%)

Query  24   RNNLDAAQYKHAVLGLIFLKYVSDAFDARRERVLADLRDPDSESFYPDATEEDLHAELED  83
            R ++DAA+YK+  LGLIFLKYVSD+F+ +                Y +  ++    E ED
Sbjct  18   RGSMDAAEYKNVALGLIFLKYVSDSFEEK----------------YKELKQDPYADE-ED  60

Query  84   RDHYTAANTFWVPPLARWQNLQSWAKLPPQTTVEVKNGKTEKYTIKSTALLIDDALAAVE  143
            +D+Y A N FWVP  ARWQ ++  AK P                    + LID A+ A+E
Sbjct  61   QDEYLAENIFWVPKEARWQYINDNAKKP------------------EIGQLIDKAMIAIE  102

Query  144  HENEPLKNVLARDTYARLQLDPANLRGLIDLVAGIPFTHDRLQARDILGHVYEYFLGQFA  203
             ENE+LK VL+++ YAR  LD  +L ++IDL + + + +   + +D+LG+VYEYF+++FA
Sbjct  103  KENESLKGVLPKE-YARPALDKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFA  160

Query  204  LAEGKKGGQYFTPKSIVGLIVEMLQPYWGRVYDPAMGSGGFFVEIEKHVERAYDERTHGA  263
             AEGK++G+++TP SIV L+VEM++PY GR+YDP  GSGG FV+ E+     + E+ +G 
Sbjct  161  SAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSER-----FVEKHQGR  215

Query  264  SGGISVYGQESNPTTWRLAAMNMAIRGIDFNFGKTWANSFTQDQHPDLRADFVMANPPFN  323
             ++I++YGQESNPTTW+LA MN+AIRGID ++G   A++F +D H +L+AD+++ANPPFN
Sbjct  216  LDDIAIYGQESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFN  275

Query  324  VSDWWDAKLADDPRWTHGTPPKGNANFAWVQHMLHHLAPTGSMALLLANGSMSGTSGGEG  383
             SDW + +L DD RW  G PPKGNAN+AW++HM+  LAP G+ +++LANGSMS ++ +E 
Sbjct  276  ASDWGQERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDEL  335

Query  384  DIRRALVEADLVECMVALPGQLFTNTQIPACIWFLTKDKAARNGKRDRRGEVLFLDARGV  443
            +IR+ L+E DLVEC+V+LPGQLF +TQIP C+WF++++K ++NGK++R+ E+LF+DAR +
Sbjct  336  EIRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNK-GQNGKKERKNEILFIDAREI  394

Query  444  GYMKDRVLRDFTREDIQKLAGTFHAWQGLGDDEYADIPGFCKSATLAEIAAQGFVLTPGR  503
            G M  R L++F+ EDIQK+A T+H+W+G  D  Y DI+GFCK   L E+  + ++LTPGR
Sbjct  395  GHMVSRTLKEFSDEDIQKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGR  454

Query  504  YVGVAAAEDDGEPFAEKMARLTAELSGQFEESAALEAKIRRNLEGVGYEV  553
            YVG+A  E+D EPF +KM R+T+ELS QF  S  LE +IR++LEG+GY V
Sbjct  455  YVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

202) Tola_1220 in NC_012691


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  446 bits (1679),  Expect = 2e-126, Method: Compositional matrix adjust.
 Identities = 270/557 (49%), Positives = 393/557 (71%), Gaps = 57/557 (10%)

Query  11   DLEKKLWNAADKLRATLDAAQYKHAVLGLIFVKYVSDAFSIRQDEIKADLANPEHEYYLD  70
            ++E KLW+AADKLR+++DAA+YK+  LGLIF+KYVSD+F  +  E+K D        Y D
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDP-------YAD  57

Query  71   PDDFTPeelaeeiaieleQRDYYTEKNVFWLPTESRWKFLQDNGPLVIGGADLVIDSKPK  130
             +D               Q +Y +E N+FW+P E+RW++++DN+                
Sbjct  58   EED---------------QDEYLAE-NIFWVPKEARWQYINDNA----------------  85

Query  131  KITSVGHLIDNALEGIERDNPKLKGVLNKHYAALKIDQAKLNELINLIATIPFTHKSLNS  190
            K   +G+LID+A+ +IE++N  LKGVL K+YA   +D+ KL ++I+L+ T+ + +     
Sbjct  86   KKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEKLGDIIDLF-TFKLGDTESRK  144

Query  191  KDILGHIYEYFLGEFALAEGKKGGQFYTPASIVTLIVEMIEPFEGRVYDPAMGSGGFFVQ  250
            +D+LG++YEYF++ FA AEGK++G+FYTP+SIV L+VEMIEP+ GR+YDP  GSGG FVQ
Sbjct  145  QDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQ  204

Query  251  SEKFIERYAGKNNIDPLTQKQKISIYGQEYNYTTWQLAAMNMAIRGLDYDFGKEPASTYT  310
            SE+F+E+  G+ +         I+IYGQE N TTW+LA MN+AIRG+D D+G   A T+ 
Sbjct  205  SERFVEKHQGRLD--------DIAIYGQESNPTTWKLAKMNLAIRGIDNDLGERNADTFH  256

Query  311  NDQHPDLRADFIMANPPFNMKEWDAGVDDNDPRWKYGKPPSGNANFAWLQHMLYHLAPNG  370
            ND H +L+AD+I+ANPPFN  +W+     +D RW++G PP GNAN+AW++HM+  LAPNG
Sbjct  257  NDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNG  316

Query  371  SQALLLANGSMSSTTNNEGEIRKNLVTNDLIECMVALPGQLFTNTQIPACIWFLTNNKGE  430
            + +++LANGSMS++ ++E EIRKNL+ +DL+EC+V+LPGQLF +TQIP C+WF++NNKG+
Sbjct  317  TAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQ  376

Query  431  RTDKAGRKLRNRKGEVLFIDARQLGYMKDRVLRDFTMDDIQKVADIFHAWKMGEAVNGVA  490
               K      +RK E+LFIDAR++G M  R L++F+ +DIQKVA+ +H+W+   + N+  
Sbjct  377  NGKK------ERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWR---GTNDKY  427

Query  491  YEDQAGFCKSASLEEITKHDFVLTPGRYVGAAVEEDDGIPFTEKMATLTEKLSEQFAESA  550
            YED AGFCK  +LEE+ +++++LTPGRYVG A  E+D  PF +KM  +T  LSEQFA S 
Sbjct  428  YEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSK  487

Query  551  KLEAEIKQKLVGLGYEL  567
             LE +I++ L GLGY +
Sbjct  488  ELEDQIRKSLEGLGYGV  504

203) VEJY3_11790 in NC_016613


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  446 bits (1679),  Expect = 2e-126, Method: Compositional matrix adjust.
 Identities = 265/557 (48%), Positives = 395/557 (71%), Gaps = 59/557 (10%)

Query  12   LESKLWTAADKLRASLDASQYKHAVLGLIFVKYVSDAFTLRQEELKQD-FANPDHEYFLD  70
            +E KLW AADKLR+S+DA++YK+  LGLIF+KYVSD+F  +  ELKQD +A+ +++    
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ----  61

Query  71   PEGYTaeeleqeiaieleqRDYYKEKNVFWLPTESRWKFLQDNGPMVIGGADLVIDDKTK  130
                                D Y   N+FW+P E+RW++++DN+                
Sbjct  62   --------------------DEYLAENIFWVPKEARWQYINDNA----------------  85

Query  131  KITSVGHLIDNALEGIERDNQKLKGVLNKHYASLKIDQAKLNELINLIATIPFNHKSLNS  190
            K   +G+LID+A+ +IE++N+ LKGVL K+YA   +D+ KL ++I+L+ T+ + +     
Sbjct  86   KKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEKLGDIIDLF-TFKLGDTESRK  144

Query  191  KDILGHIYEYFLGQFALAEGKKGGQFYTPASIVSLIVEMIEPFEGRVYDPAMGSGGFFVQ  250
            +D+LG++YEYF+++FA AEGK++G+FYTP+SIV L+VEMIEP+ GR+YDP  GSGG FVQ
Sbjct  145  QDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQ  204

Query  251  SEKFIERRANQKEIDPLTQKQRISIYGQEYNYTTWQLAAMNMAIRGLDYDFGKEPASTYT  310
            SE+F+E++  + +         I+IYGQE N TTW+LA MN+AIRG+D D+G   A T+ 
Sbjct  205  SERFVEKHQGRLD--------DIAIYGQESNPTTWKLAKMNLAIRGIDNDLGERNADTFH  256

Query  311  NDQHPDLRADFIMANPPFNMKEWNTGVDDNDPRWVYGKPPSGNANFAWMQHMLYHLAPDG  370
            ND H +L+AD+I+ANPPFN  +W      +D RW +G PP GNAN+AW++HM+  LAP+G
Sbjct  257  NDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNG  316

Query  371  SQALLLANGSMSSTTNNEGEVRAALVENDLVECMVALPGQLFTNTQIPACIWFLTKNKKA  430
            + +++LANGSMS++ ++E E+R  L+E+DLVEC+V+LPGQLF +TQIP C+WF+++NK  
Sbjct  317  TAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNK--  374

Query  431  RTDKSGRKLRDRKGEVLFIDARNLGYMKDRVLRDFTQDDIQKVADLYHAWKTGEEVNGVA  490
              +++G+K  +RK E+LFIDAR++G M  R L++F+++DIQKVA+ YH+W+  ++     
Sbjct  375  --GQNGKK--ERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGTNDKY---  427

Query  491  YEDQAGFCKSATLEEIKKHDFVLTPGRYVGATEELDDGIPFGEKMATLTAKLSEQFAESA  550
            YED AGFCK   LEE+K+++++LTPGRYVG ++  +D  PF +KM  +T+ LSEQFA S 
Sbjct  428  YEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSK  487

Query  551  TLEAEIKKNLVGLGYEL  567
             LE +I+K+L GLGY +
Sbjct  488  ELEDQIRKSLEGLGYGV  504

204) CD241_2201 in NC_016782


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  445 bits (1678),  Expect = 3e-126, Method: Compositional matrix adjust.
 Identities = 258/523 (50%), Positives = 388/523 (75%), Gaps = 26/523 (4%)

Query  14   TSKEIKDTLWKSADKLRGSMDASQYKDVALGLVFLKYVSDSFEERQKEIRAELEGKGFDE  73
            ++  + + LW++ADKLRGSMDA++YK+VALGL+FLKYVSDSFEE+ KE++ +     + +
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQD----PYAD  57

Query  74   EYILEDLADVDAYTSENVFWVASNARWDFLKKYSKGMDLEGKHKSIGKLIDEAMQQLMAD  133
            E       D D Y +EN+FWV+ +ARW++++        ++K   IG+LID AM  +  +
Sbjct  58   E------EDQDEYLAENIFWVPKEARWQYIND-------NAKKPEIGQLIDKAMIAIEKE  104

Query  134  NESLLGTLPQIYGKDNIDQRRLGELVDLFSSTYFASTKDKKARDLLGEVYEYFLDKFAKA  193
            NESL G LP+ Y++  +D+ +LG+++DLF  T+  +  + + +D+LG VYEYF+ KFA A
Sbjct  105  NESLKGVLPKEYARPALDKEKLGDIIDLF--TFKLGDTESRKQDVLGRVYEYFIAKFASA  162

Query  194  EGKRGGEFYTPQPVVRTLVEILEPTEGRVYDPCCGSGGMFVQAEKFLEVTKRDRSNIAVY  253
            EGK +GEFYTP ++V+ LVE++EP  GR+YDPCCGSGGMFVQ+E+F+E  +    +IA+Y
Sbjct  163  EGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIY  222

Query  254  GQELNERTWRMAKMNLAIHAISSSGLGERWGDTFARDIHAGTKMDYIMANPPFNIKDWIC  313
            GQE N  TW++AKMNLAI++I  ++LGER +DTF  D+H G K DYI+ANPPFN  DW  
Sbjct  223  GQESNPTTWKLAKMNLAIRGI-DNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQ  281

Query  314  NE--EDARWKYGVPPAKNANFAWMQHIISKLKDHGEAGVVMANGTMTSQSSGEGEIRKNM  371
            +   +D RW++GVPP  NAN+AW++H+ISKL  +G AG V+ANG+M++ + +E EIRKN+
Sbjct  282  ERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNL  341

Query  372  VEDDVVSCVIALPAQLFRGTGIPVCVWFFAKDKSAGAGGSVDRRGEVLLIDARQLGHMID  431
            +E+D+V C+++LP+QLF +T IPVC+WF++++K  G  G  +R+ E+L+IDAR++GHM+ 
Sbjct  342  IEQDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVS  399

Query  432  RTERAFSDEDIAKIANAFRTWRGRKSAEGEYEDEAGFCKSATIEEIREAGYALTPGRYVG  491
            RT + FSDEDI K+A+++++WRG  + +  YED AGFCK   +EE+++  Y LTPGRYVG
Sbjct  400  RTLKEFSDEDIQKVAQTYHSWRG--TNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVG  457

Query  492  MpeaeeddepidekiaRLTAELTAALDESARLDAVVREQLGRL  534
            +++ EED+EP+++K+ R+T+EL+  +  S  L+  +R  L  L
Sbjct  458  LADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

205) CDHC01_2201 in NC_016786


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  445 bits (1678),  Expect = 3e-126, Method: Compositional matrix adjust.
 Identities = 258/523 (50%), Positives = 388/523 (75%), Gaps = 26/523 (4%)

Query  14   TSKEIKDTLWKSADKLRGSMDASQYKDVALGLVFLKYVSDSFEERQKEIRAELEGKGFDE  73
            ++  + + LW++ADKLRGSMDA++YK+VALGL+FLKYVSDSFEE+ KE++ +     + +
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQD----PYAD  57

Query  74   EYILEDLADVDAYTSENVFWVASNARWDFLKKYSKGMDLEGKHKSIGKLIDEAMQQLMAD  133
            E       D D Y +EN+FWV+ +ARW++++        ++K   IG+LID AM  +  +
Sbjct  58   E------EDQDEYLAENIFWVPKEARWQYIND-------NAKKPEIGQLIDKAMIAIEKE  104

Query  134  NESLLGTLPQIYGKDNIDQRRLGELVDLFSSTYFASTKDKKARDLLGEVYEYFLDKFAKA  193
            NESL G LP+ Y++  +D+ +LG+++DLF  T+  +  + + +D+LG VYEYF+ KFA A
Sbjct  105  NESLKGVLPKEYARPALDKEKLGDIIDLF--TFKLGDTESRKQDVLGRVYEYFIAKFASA  162

Query  194  EGKRGGEFYTPQPVVRTLVEILEPTEGRVYDPCCGSGGMFVQAEKFLEVTKRDRSNIAVY  253
            EGK +GEFYTP ++V+ LVE++EP  GR+YDPCCGSGGMFVQ+E+F+E  +    +IA+Y
Sbjct  163  EGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIY  222

Query  254  GQELNERTWRMAKMNLAIHAISSSGLGERWGDTFARDIHAGTKMDYIMANPPFNIKDWIC  313
            GQE N  TW++AKMNLAI++I  ++LGER +DTF  D+H G K DYI+ANPPFN  DW  
Sbjct  223  GQESNPTTWKLAKMNLAIRGI-DNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQ  281

Query  314  NE--EDARWKYGVPPAKNANFAWMQHIISKLKDHGEAGVVMANGTMTSQSSGEGEIRKNM  371
            +   +D RW++GVPP  NAN+AW++H+ISKL  +G AG V+ANG+M++ + +E EIRKN+
Sbjct  282  ERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNL  341

Query  372  VEDDVVSCVIALPAQLFRGTGIPVCVWFFAKDKSAGAGGSVDRRGEVLLIDARQLGHMID  431
            +E+D+V C+++LP+QLF +T IPVC+WF++++K  G  G  +R+ E+L+IDAR++GHM+ 
Sbjct  342  IEQDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVS  399

Query  432  RTERAFSDEDIAKIANAFRTWRGRKSAEGEYEDEAGFCKSATIEEIREAGYALTPGRYVG  491
            RT + FSDEDI K+A+++++WRG  + +  YED AGFCK   +EE+++  Y LTPGRYVG
Sbjct  400  RTLKEFSDEDIQKVAQTYHSWRG--TNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVG  457

Query  492  MpeaeeddepidekiaRLTAELTAALDESARLDAVVREQLGRL  534
            +++ EED+EP+++K+ R+T+EL+  +  S  L+  +R  L  L
Sbjct  458  LADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

206) MARHY0353 in NC_017067


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  445 bits (1677),  Expect = 3e-126, Method: Compositional matrix adjust.
 Identities = 263/564 (47%), Positives = 401/564 (72%), Gaps = 68/564 (12%)

Query  11   ALDDKLWKAADKLRANLDAANYKHVVLGLIFLKYVSDAfeerqeellerfKDENDDIYY-  69
            ++++KLW+AADKLR+++DAA+YK+V LGLIFLKYVSD+F               ++ Y  
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSF---------------EEKYKE  49

Query  70   LPPEDYDGDEDYQQALLEELEILDYYREANVFWVPKPARWSTLKEKAVLPVGTVLWQDDA  129
            L  + Y ++ED ++           Y   N+FWVPK ARW  ++++A             
Sbjct  50   LKQDPYADEEDQDE-----------YLAENIFWVPKEARWQYINDNA-------------  85

Query  130  GNDVKLRSVSWLIDNALEEIEKSNAKLKGILNR-ISQYQLDNDKLLGLINTFSDTSFTKP  188
                K   ++ LID+A+  IEK N  LKG+L +  ++  LD++KL ++I+ F+       
Sbjct  86   ----KKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEKLGDIIDLFT-------  134

Query  189  VFEGEKLSLHSKDILGHVYEYFLGQFALAEGKQGGQYYTPKSIVTLIVEMLQPYSGRVYD  248
             F       + +D+LG+VYEYF+++FA AEGK++G++YTP SIV L+VEM++PY GR+YD
Sbjct  135  -FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYD  193

Query  249  PAMGSGGFFVSSDKFIEEHASEQHYDASEQKKHISVYGQESNPTTWKLAAMNMAIRGIDF  308
            P  GSGG FV S++F+E H +        +  +I++YGQESNPTTWKLA MN+AIRGID 
Sbjct  194  PCCGSGGMFVQSERFVEKHQG--------RLDDIAIYGQESNPTTWKLAKMNLAIRGIDN  245

Query  309  NFGKKNADTFLDDQHPDLRADFVMANPPFNIKDWWSESLADDVRWKYGTPPKGNANFGWM  368
            ++G +NADTF +D H +L+AD+++ANPPFN  DW  E L DD RW++G PPKGNAN++W+
Sbjct  246  DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWI  305

Query  369  QHMLHHLAPTGSMALLLANGSMSSNTNNEGEIRKRLVEEDLVECMVALPGQLFTNTQIPA  428
            +HM+  LAP G+ +++LANGSMS++ ++E EIRK L+E+DLVEC+V+LPGQLF +TQIP 
Sbjct  306  EHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPV  365

Query  429  CIWFLTRDKANGMVRNEKKRDRREEFLFIDARNLGFMRDRVLRDFTNDDIAKITDTFHAW  488
            C+WF++ +K+     ++ K++R++E+LFIDAR++G M  R L++F+++DI K+++T+H+W
Sbjct  366  CLWFISNNKG-----QNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSW  420

Query  489  QKGKG--YEDIAGFCKSASLDEIKKHDFVLTPGRYVGAQEQEDDGEPFAEKMARLTGQLR  546
            +  ++  YEDIAGFCK  +L+E+K+++++LTPGRYVG  + E+D EPF +KM R+T++L 
Sbjct  421  RGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELS  480

Query  547  EQFAESDRLEGEIKRNIGGLGYVI  570
            EQFA S  LE++I++++ GLGY +
Sbjct  481  EQFAKSKELEDQIRKSLEGLGYGV  504

207) CD31A_2338 in NC_016799


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  445 bits (1676),  Expect = 4e-126, Method: Compositional matrix adjust.
 Identities = 257/523 (50%), Positives = 388/523 (75%), Gaps = 26/523 (4%)

Query  14   TSKEIKDTLWKSADKLRGSMDASQYKDVALGLVFLKYVSDSFEERQKEIRAELEGKGFDE  73
            ++  + + LW++ADKLRGSMDA++YK+VALGL+FLKYVSDSFEE+ KE++ +     + +
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQD----PYAD  57

Query  74   EYILEDLADVDAYTSENVFWVASNARWDFLKKYSKGMELEGKHKSIGKLIDEAMQQLMTD  133
            E       D D Y +EN+FWV+ +ARW++++        ++K   IG+LID AM  +  +
Sbjct  58   E------EDQDEYLAENIFWVPKEARWQYIND-------NAKKPEIGQLIDKAMIAIEKE  104

Query  134  NESLLGTLPQIYGKDNIDQRRLGELVDLFSSTYFASTKDKKARDLLGEVYEYFLDKFAKA  193
            NESL G LP+ Y++  +D+ +LG+++DLF  T+  +  + + +D+LG VYEYF+ KFA A
Sbjct  105  NESLKGVLPKEYARPALDKEKLGDIIDLF--TFKLGDTESRKQDVLGRVYEYFIAKFASA  162

Query  194  EGKRGGEFYTPQPVVRTLVEILEPTEGRVYDPCCGSGGMFVQAEKFLEATKRDRSNIAVY  253
            EGK +GEFYTP ++V+ LVE++EP  GR+YDPCCGSGGMFVQ+E+F+E  +    +IA+Y
Sbjct  163  EGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIY  222

Query  254  GQELNERTWRMAKMNLAIHAISSSGLGERWGDTFARDIHAGTKMDYIMANPPFNIKDWIC  313
            GQE N  TW++AKMNLAI++I  ++LGER +DTF  D+H G K DYI+ANPPFN  DW  
Sbjct  223  GQESNPTTWKLAKMNLAIRGI-DNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQ  281

Query  314  NE--EDAHWKYGVPPAKNANFAWMQHIISKLKDHGEAGVVMANGTMTSQSSGEGEIRKNM  371
            +   +D +W++GVPP  NAN+AW++H+ISKL  +G AG V+ANG+M++ + +E EIRKN+
Sbjct  282  ERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNL  341

Query  372  VEDDVVSCVIALPAQLFRGTGIPVCVWFFAKDKSAGAGGSVDRRGEVLLIDARQLGHMID  431
            +E+D+V C+++LP+QLF +T IPVC+WF++++K  G  G  +R+ E+L+IDAR++GHM+ 
Sbjct  342  IEQDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVS  399

Query  432  RTERAFSDEDIAKIANAFRTWRGRKSAEGEYEDEAGFCKSATIEEIREAGYALTPGRYVG  491
            RT + FSDEDI K+A+++++WRG  + +  YED AGFCK   +EE+++  Y LTPGRYVG
Sbjct  400  RTLKEFSDEDIQKVAQTYHSWRG--TNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVG  457

Query  492  MpeaeeddepidekiaRLTAELTAALDESARLDAVVREQLGRL  534
            +++ EED+EP+++K+ R+T+EL+  +  S  L+  +R  L  L
Sbjct  458  LADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

208) CDC7B_2290 in NC_016801


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  445 bits (1675),  Expect = 4e-126, Method: Compositional matrix adjust.
 Identities = 258/523 (50%), Positives = 389/523 (75%), Gaps = 26/523 (4%)

Query  14   TSKEIKDTLWKSADKLRGSMDASQYKDVALGLVFLKYVSDSFEERQKEIRAELEGQGIDE  73
            ++  + + LW++ADKLRGSMDA++YK+VALGL+FLKYVSDSFEE+ KE++        ++
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELK--------QD  53

Query  74   EYILEDLADVDAYTSENVFWVASNARWDFLKKYSKGMDLEGKHKSIGKLIDEAMQQLMAD  133
             Y  E+  D D Y +EN+FWV+ +ARW++++        ++K   IG+LID AM  +  +
Sbjct  54   PYADEE--DQDEYLAENIFWVPKEARWQYIND-------NAKKPEIGQLIDKAMIAIEKE  104

Query  134  NESLLGTLPQIYGKDNIDQRRLGELVDLFSSTYFASTKDKKARDLLGEVYEYFLDKFAKA  193
            NESL G LP+ Y++  +D+ +LG+++DLF  T+  +  + + +D+LG VYEYF+ KFA A
Sbjct  105  NESLKGVLPKEYARPALDKEKLGDIIDLF--TFKLGDTESRKQDVLGRVYEYFIAKFASA  162

Query  194  EGKRGGEFYTPQPVVRTLVEILEPTEGRVYDPCCGSGGMFVQAEKFLEATKRDRSNIAVY  253
            EGK +GEFYTP ++V+ LVE++EP  GR+YDPCCGSGGMFVQ+E+F+E  +    +IA+Y
Sbjct  163  EGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIY  222

Query  254  GQELNERTWRMAKMNLAIHAISSSGLGERWGDTFARDIHAGTKMDYIMANPPFNIKDWIC  313
            GQE N  TW++AKMNLAI++I  ++LGER +DTF  D+H G K DYI+ANPPFN  DW  
Sbjct  223  GQESNPTTWKLAKMNLAIRGI-DNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQ  281

Query  314  NE--EDARWKYGVPPAKNANFAWMQHIISKLKDHGEAGVVMANGTMTSQSSGEGEIRKKM  371
            +   +D RW++GVPP  NAN+AW++H+ISKL  +G AG V+ANG+M++ + +E EIRK++
Sbjct  282  ERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNL  341

Query  372  VEDDVVSCVIALPAQLFRGTGIPVCVWFFAKDKSAGAGGSVDRRGEVLLIDARQLGHMID  431
            +E+D+V C+++LP+QLF +T IPVC+WF++++K  G  G  +R+ E+L+IDAR++GHM+ 
Sbjct  342  IEQDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVS  399

Query  432  RTERAFSDEDIAKIANAFRTWRGRKSAEGEYEDEAGFCKSATIEEIREAGYALTPGRYVG  491
            RT + FSDEDI K+A+++++WRG  + +  YED AGFCK   +EE+++  Y LTPGRYVG
Sbjct  400  RTLKEFSDEDIQKVAQTYHSWRG--TNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVG  457

Query  492  MpeaeeddepidekiaRLTAELTAALDESVRLDAVVREQLGRL  534
            +++ EED+EP+++K+ R+T+EL+  +  S  L+  +R  L  L
Sbjct  458  LADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

209) hsdM in NC_000907


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  445 bits (1675),  Expect = 5e-126, Method: Compositional matrix adjust.
 Identities = 269/543 (50%), Positives = 382/543 (71%), Gaps = 57/543 (10%)

Query  44   LDEKLWASADKLRKQLDAANYKHIVLGLIFLKYISDSFTHQQEKIQAELSTPENPLYLDR  103
            ++EKLW +ADKLR  +DAA+YK++ LGLIFLKY+SDSF ++   ++              
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELK--------------  51

Query  104  TFFDTEEEYQEALTAELENRDYYTADNVFWVPASARWQALQEVSILNTGAELPWGGKFSG  163
                 ++ Y +      E++D Y A+N+FWVP  ARWQ +++             +K + 
Sbjct  52   -----QDPYADE-----EDQDEYLAENIFWVPKEARWQYIND------------NAKKPE  89

Query  164  VAKLIDDAFDAIEKDNEKLKGVLQRISGY---AVNEDTLRGLIILFSDTHFTRPTYNGEP  220
            +++LID A  AIEK+NE LKGVL +   Y   A++ + L ++I LF        T++   
Sbjct  90   IGQLIDKAMIAIEKENESLKGVLPK--EYARPALDKEKLGDIIDLF--------TFKLGD  139

Query  221  VHLGAKDILGHVYEYFLSRFAQAEGKRSGQYFTPKSIVSLIVEMLEPYSGRVYDPAMGSG  280
             +   +D+LG+VYEYF+++FA AEGK +G+++TP SIV L+VEM+EPY GR+YDP  GSG
Sbjct  140  TESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSG  199

Query  281  GFFVQTERFITAHQGNINNVSIYGQEFNPTTWKLAAMNMAIRGIDYDFGKYNADSFTQPQ  340
            G FVQ+ERF+  HQG +++++IYGQE NPTTWKLA MN+AIRGID D+G  NAD+F +  
Sbjct  200  GMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDL  259

Query  341  HIDKKMDFIMANPHFNDKEWWNESLADDPRWAYGTPPKGNANFAWLQHMIYHLSPNGKIA  400
            H + K D+I+ANP FN  +W +E L DD RW +G PPKGNAN+AW++HMI  L+PNG  +
Sbjct  260  HKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAG  319

Query  401  LLLANGSMSSQTNNEGEIRKAIINADLVECMVALPGQLFTNTKIPACIWFLNRN------  454
            ++LANGSMS+  ++E EIRK +I+ DLVEC+V+LPGQLF +T+IP C+WF++ N      
Sbjct  320  FVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNGK  379

Query  455  KKRKGEVLFIDARQIGYMKDRVLRDFTADDIAKIADTLHAWQTSDG--YEDQAAFCKSAT  512
            K RK E+LFIDAR+IG M  R L++F+ +DI K+A+T H+W+ +++  YED A+FCK   
Sbjct  380  KERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGTNDKYYEDIAGFCKVVN  439

Query  513  LEEIKNNDFVLTPGRYVGTAEQEDDGVPFAEKMQNLTALLKEQFAKSAELEAEIKKNLGG  572
            LEE+KNN+++LTPGRYVG A+ E+D  PF +KM+ +T+ L EQFAKS ELE +I+K+L G
Sbjct  440  LEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEG  499

Query  573  LGY  575
            LGY
Sbjct  500  LGY  502

210) EcE24377A_0286 in NC_009801


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  445 bits (1675),  Expect = 5e-126, Method: Compositional matrix adjust.
 Identities = 264/559 (48%), Positives = 398/559 (72%), Gaps = 65/559 (11%)

Query  12   LDNKFWKAADKLRANMDAANYKHVVLGLIFLKYVSDAFEARQQELTTLFRDVGNPDNIYA  71
            +++K+W+AADKLR++MDAA+YK+V LGLIFLKYVSD+FE +       +++         
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEK-------YKE---------  49

Query  72   MSRDDYGSDEEYAQAIQEELEVEDYYTEKNIFWVPKAARWDTLKNKAMLPTGTVLWVDET  131
            + +D Y+ +E+     Q+E      Y   NIFWVPK ARW+ ++++A  P          
Sbjct  50   LKQDPYADEED-----QDE------YLAENIFWVPKEARWQYINDNAKKP----------  88

Query  132  TGKDVTLRSVSWLVDNALDEIEKTNPKLKGILNR-ISQYQLGNEVLTGLINTFSDANFSN  190
                     ++ L+D+A+  IEK N  LKG+L +  ++  L++E L ++I+ F+      
Sbjct  89   --------EIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEKLGDIIDLFT------  134

Query  191  PEYNGEKLNLKSKDILGHVYEYFLGQFALAEGKQGGQYYTPKSIVTLIVEMLQPYNGRVY  250
              ++    + + +D+LG+VYEYF+++FA AEGK++G++YTP SIV L+VEM++PY+GR+Y
Sbjct  135  --FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIY  192

Query  251  DPAMGSGGFFVSSDRFIEEHAGEKQYNAAEQKRNISVYGQESNPTTWKLAAMNMAIRGID  310
            DP  GSGG FV S+RF+E H G  +        +I++YGQESNPTTWKLA MN+AIRGID
Sbjct  193  DPCCGSGGMFVQSERFVEKHQGRLD--------DIAIYGQESNPTTWKLAKMNLAIRGID  244

Query  311  FNFGSKNADTLLDDQHPDLRADFVMANPPFNMKEWWNAKLENDVRWKYGTPPQGNANFAW  370
             ++G +NADT+ +D H +L+AD+++ANPPFN  +W + +L +D RW++G PP+GNAN+AW
Sbjct  245  NDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAW  304

Query  371  MQHMIHHLAPKGSMALLLANGSMSSNTNNEGEIRRNLIKADLVECMVALPGQLFTNTQIP  430
            ++HMI  LAP+G+ +++LANGSMS++ ++E EIR+NLI  DLVEC+V+LPGQLF +TQIP
Sbjct  305  IEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIP  364

Query  431  ACIWFLTKDKSSGNGKAHRKGEVLFIDARKIGFMKDRVLRDFTREDIARIADTFHKWQAD  490
             C+WF++++K+  NGK +RK E+LFIDAR IG M  R L++F+ EDI ++A+T+H W++ 
Sbjct  365  VCLWFISNNKGQ-NGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGT  423

Query  491  KE--YEDEAGFCFSATLEDIQKNDFVLTPGRYVGAAEQAEDDEPFAEKMARLTAQLKGQL  548
            ++  YED AGFC    LE++++N+++LTPGRYVG A+  ED+EPF +KM R+T++L  Q+
Sbjct  424  NDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQF  483

Query  549  EESAKLEAQIKANLGGLGY  567
              S  LE QI+ +L GLGY
Sbjct  484  AKSKELEDQIRKSLEGLGY  502

211) Mvan_0034 in NC_008726


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  444 bits (1674),  Expect = 5e-126, Method: Compositional matrix adjust.
 Identities = 257/522 (50%), Positives = 384/522 (74%), Gaps = 31/522 (5%)

Query  21   LKDTLWKAADKLRGSLSASQYKDVILGLVFLKYVSDAYDERREAIRTELEADGLDAEQIE  80
            + + LW+AADKLRGS+ A++YK+V LGL+FLKYVSD+++E+   ++ +  AD        
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADE-------  58

Query  81   DLIEDPEEYQGYGVFVVPPGARWKFLAENAKGLPAAGGEPAKNIGQLIDEAMDAVMKANP  140
               ED +EY +  +F VP  ARW+++ +NAK           +IGQLID AM A+ K N 
Sbjct  59   ---EDQDEYLAENIFWVPKEARWQYINDNAK---------KPEIGQLIDKAMIAIEKENE  106

Query  141  TLQGTLPRLYNKDNIDQRRLGELIDLFNSARFSRQGDGRARDLMGEVYEYFLGNFARAEG  200
            +L+G LP+ Y +  +D+ +LG++IDLF + +++ + ++R +D++G VYEYF+++FA AEG
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLF-TFKLG-DTESRKQDVLGRVYEYFIAKFASAEG  164

Query  201  KRGGEFFTPPSVVKVIVEVLEPSRGRVYDPCCGSGGMFVQTEKFIYEHDGDPKEIAVYGQ  260
            K +GEF+TP+S+VK++VE++EP +GR+YDPCCGSGGMFVQ+E+F+  H+G   +IA+YGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  261  ESIEETWRMAKMNLAIHGIDNKGLGARWGDTFARDQHPDVQMDYVLANPPFNIKDWARNE  320
            ES   TW++AKMNLAI+GIDN +LG R +DTF  D H +++ DY+LANPPFN  DW+++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  321  --EDARWRFGVPPANNANYAWIQHILYKLASGGKAGVVMAngsmssnsngegDIRAQIVE  378
              +D RW+FGVPP  NANYAWI+H++ KLA+ G AG V+ANGSMS+++++E +IR +++E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  379  ADLVSCMIALPTQLFRSTGIPVCVWFFAKDKTAGKQGSVDRSGQVLFIDAREMGYMVDRA  438
             DLV C+++LP QLF ST IPVC+WF++++K  G++G  +R  ++LFIDARE+G MV R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRT  401

Query  439  ERALSDDDIVKIGDTFHAWRGSASAAAKGVVYQDVPGFCKSATLAEIKAADYALTPGRYV  498
             + +SD+DI K+++T+H+WRG+         Y+D++GFCK   L E+K  +Y LTPGRYV
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  499  GAAAVEDDGEPIDEKIARLKTELLAAFDESARLEKVVREQLE  540
            G A VE+D EP+++K+ R+ +EL   F  S  LE  +R  LE
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLE  498

212) Achl_1096 in NC_011886


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  444 bits (1673),  Expect = 6e-126, Method: Compositional matrix adjust.
 Identities = 270/525 (52%), Positives = 371/525 (71%), Gaps = 36/525 (6%)

Query  17   LKDTLWKAADKLRGSMDASQYKDVILGLVFLKYVSDAFDERRNQIQAELEADGLNEEQIA  76
            + + LW+AADKLRGSMDA++YK+V LGL+FLKYVSD+F+E+ +    EL  D   +E   
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYK----ELKQDPYADE---  58

Query  77   QLIDDVDEYTSRGVFWVSGRARWSYLAENAKGLPAMDGAAPKSIGLLIDDAMDLIMTDNK  136
               +D DEY +  +FWV+  ARW Y+ +NAK            IG LID AM  I  +N 
Sbjct  59   ---EDQDEYLAENIFWVPKEARWQYINDNAK---------KPEIGQLIDKAMIAIEKENE  106

Query  137  SLAATLPRIYNRDNVDQRRLGELLDLFNSARFT-GQGASKARDLLGEVYEYFLEKFAKAE  195
            SL + LP+ Y R  +D+ +LG+++DLF    F  G+  S+ +D+LG VYEYF+ KFA AE
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLFT---FKLGDTESRKQDVLGRVYEYFIAKFASAE  163

Query  196  GKRGGEFYTPAGVVRVLVEVLEPHRGRVYDPCCGSGGMFVQAEKFLEAHNMEGSDISVYG  255
            GK +GEFYTP+++V++LVE++EP +GR+YDPCCGSGGMFVQ+E+F+E H+    DI++YG
Sbjct  164  GKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYG  223

Query  256  QELNERTWRMAKMNLAIHGLNANLAARWGDTFARDQHPELTGNTGADFIMANPPFNIKVW  315
            QE N  TW++AKMNLAI+G++ +L+ R +DTF  D H  L     AD+I+ANPPFN   W
Sbjct  224  QESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLK----ADYILANPPFNASDW  279

Query  316  SRSE--SDPRWKYGVPPAGNANYAWIQHIISKLAPGGSAGVVMAngsmssnsggegeIRA  373
            ++     D RW++GVPP GNANYAWI+H+ISKLAP G+AG V+ANGSMS+++ +E EIR 
Sbjct  280  GQERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRK  339

Query  374  QLVEADLVSCMVALPTQLFRSTGIPVCTWFFAKDKTAGKKGSIDRTGQVLFIDARNLGYM  433
            +L+E DLV C+V+LP QLF ST IPVC WF++++K  G++G  +R  ++LFIDAR++G M
Sbjct  340  NLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHM  397

Query  434  VDRAERALSDEDITKIANTYHAWRGTASAVEAGLTYEDEAGFCYSASLAEIKAADYALTP  493
            V R+ + +SDEDI K+A+TYH+WRGT         YED AGFC   +L E+K  +Y LTP
Sbjct  398  VSRTLKEFSDEDIQKVAQTYHSWRGTNDKY-----YEDIAGFCKVVNLEEVKNNEYILTP  452

Query  494  GRYVGAVDVEDDGEPIEEKIARLSKELFAQFEESERRARLVREQL  538
            GRYVG  DVE+D EP+E+K+ R++ EL  QF  S      +R  L
Sbjct  453  GRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSL  497

213) hsdM1 in NC_020230


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  444 bits (1673),  Expect = 6e-126, Method: Compositional matrix adjust.
 Identities = 266/521 (52%), Positives = 390/521 (75%), Gaps = 28/521 (5%)

Query  9    FQDTLWKAADKLRGSMDSSQYKDIVLGLVFLKYVTdafdarrlellaeleeegataeeia  68
            F++ LW+AADKLRGSMD+++YK++ LGL+FLKYV+D+F+ +  EL  +   +    +E  
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDE--  63

Query  69   eeledrdaYLEKNVFWVAKEARWDYLQRHSKGKTDDAGGEFKSIGKLIDEAAEALMADNL  128
                    YL  N+FWV+KEARW+Y++ ++K K +        IG+LID A  A+  +N 
Sbjct  64   --------YLAENIFWVPKEARWQYINDNAK-KPE--------IGQLIDKAMIAIEKENE  106

Query  129  SLEGTLPHNYNSDSVDQRRLGELVDLFSTTRFTAEGPERARDLLGEVYEYFLARFASAEG  188
            SL G LP +Y   ++D+ +LG+++DLF+     ++   R +D+LG VYEYF+A+FASAEG
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLFTFK--LGDTESRKQDVLGRVYEYFIAKFASAEG  164

Query  189  KRGGEFYTPRSVVRTLVEILEPTEGRVYDPCCGSGGMFVQAEKFLDAHDKDPSAIAIYGQ  248
            K +GEFYTP S+V+ LVE++EP  GR+YDPCCGSGGMFVQ+E+F++ H+     IAIYGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  249  ELNERTWRLARMNLAIHALNSKGLGERWGDTFARDIHPGVEMDYVLANPPFNIKDWVRNT  308
            E N  TW+LA+MNLAI+++++ +LGER +DTF  D+H G+  DY+LANPPFN  DW ++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  309  --DDKRWSYGVPPAKNANFGWMQHIIYKLSPQGEAGVVMANGTMTTSTKEEFEIRKNMLE  366
              DD RW +GVPP  NAN++W++H+I KL+P+G AG V+ANG+M+TS K+E+EIRKN++E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  367  DDVVSCVVTLPAQLFRGTQIPVCVWFFAKDKGAGSKGSVDRRREFLLIDARELGHMVDRT  426
            +D+V C+VTLP+QLF +TQIPVC+WF++++KG  +K   +R+ E+L+IDARE+GHMV RT
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKK--ERKNEILFIDAREIGHMVSRT  401

Query  427  ERTFSDEDIQKIANTFRTWRGRSSAESEYEDIPGYCKSVSLDEIREADYALTPGRYVGFA  486
             + FSDEDIQK+A+T+++WRG  + +  YEDI+G+CK V+L+E+++ +Y LTPGRYVG+A
Sbjct  402  LKEFSDEDIQKVAQTYHSWRG--TNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLA  459

Query  487  eeeedgeptdeKIARLTAELTAALDESARLGAVVREQLGRL  527
            + EED EP ++K+ R+T+EL+  +  S  L   +R  L  L
Sbjct  460  DVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

214) CDHC04_2221 in NC_016788


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  444 bits (1673),  Expect = 6e-126, Method: Compositional matrix adjust.
 Identities = 258/515 (51%), Positives = 385/515 (75%), Gaps = 26/515 (5%)

Query  22   LWKSADKLRGSMDASQYKDVALGLVFLKYVSDSFDERQKEIRAELEGQGIDEEYILEDLA  81
            LW++ADKLRGSMDA++YK+VALGL+FLKYVSDSF+E+ KE++        ++ Y  E+  
Sbjct  10   LWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELK--------QDPYADEE--  59

Query  82   DVDAYTSENVFWVASNARWDFLKKYSKGMELEGKHKSIGKLIDEAMQQLMTDNESLLGTL  141
            D D Y +EN+FWV+ +ARW++++        ++K   IG+LID AM  +  +NESL G L
Sbjct  60   DQDEYLAENIFWVPKEARWQYIND-------NAKKPEIGQLIDKAMIAIEKENESLKGVL  112

Query  142  PQIYGKDNIDQRRLGELVDLFSSTYFASTKDKKARDLLGEVYEYFLDKFAKAEGKRGGEF  201
            P+ Y++  +D+ +LG+++DLF  T+  +  + + +D+LG VYEYF+ KFA AEGK +GEF
Sbjct  113  PKEYARPALDKEKLGDIIDLF--TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEF  170

Query  202  YTPQPVVRTLVEILEPTEGRVYDPCCGSGGMFVQAEKFLEATKRDRSNIAVYGQELNERT  261
            YTP ++V+ LVE++EP  GR+YDPCCGSGGMFVQ+E+F+E  +    +IA+YGQE N  T
Sbjct  171  YTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTT  230

Query  262  WRMAKMNLAIHAISSSGLGERWGDTFARDIHAGTKMDYIMANPPFNIKDWICNE--EDAR  319
            W++AKMNLAI++I  ++LGER +DTF  D+H G K DYI+ANPPFN  DW  +   +D R
Sbjct  231  WKLAKMNLAIRGI-DNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYR  289

Query  320  WKYGVPPAKNANFAWMQHIISKLKDHGEAGVVMANGTMTSQSSGEGEIRKNMVEDDIVSC  379
            W++GVPP  NAN+AW++H+ISKL  +G AG V+ANG+M++ + +E EIRKN++E+D+V C
Sbjct  290  WQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVEC  349

Query  380  VIALPAQLFRGTGIPVCVWFFAKDKSAGVGGSVDRRGEVLLIDARQLGHMIDRTERAFSD  439
            +++LP+QLF +T IPVC+WF++++K  G  G  +R+ E+L+IDAR++GHM+ RT + FSD
Sbjct  350  IVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRTLKEFSD  407

Query  440  EDIAKIANAFRTWRGRKSAEGEYEDEAGFCKSATIEEIREAGYALTPGRYVGMpeaeedd  499
            EDI K+A+++++WRG  + +  YED AGFCK   +EE+++  Y LTPGRYVG+++ EED+
Sbjct  408  EDIQKVAQTYHSWRG--TNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDE  465

Query  500  epidekiaRLTAELTAALDESARLDAVVREQLGRL  534
            EP+++K+ R+T+EL+  +  S  L+  +R  L  L
Sbjct  466  EPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

215) PACID_07550 in NC_019395


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  444 bits (1673),  Expect = 6e-126, Method: Compositional matrix adjust.
 Identities = 252/533 (48%), Positives = 382/533 (72%), Gaps = 42/533 (7%)

Query  17   LKDTLWKAADKLRGSMSAAQYKDVVLGLIFLKYVSDAFNERREQITEELRADGYDDEAIA  76
            + + LW+AADKLRGSM AA+YK+V LGLIFLKYVSD+F+E+      EL+ D Y DE   
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEK----YKELKQDPYADE---  58

Query  77   ETLEDRDEY-ASGAFWVDPDARWDSLVADAKVAGETTIGQRINEAMDLLMHDNPSLEGTL  135
               ED+DEY A   FWV  +ARW+ +  +AK      IGQ I+ AM  +  +N SL G L
Sbjct  59   ---EDQDEYLAENIFWVPKEARWQYINDNAK---KPEIGQLIDKAMIAIEKENESLKGVL  112

Query  136  PRLFNRDNVDQRRLAELLDLLNSVQFS-GMGAAKARDLLGEVYEYFLANFALSEGHRGGE  194
            P+ + R  +D+ +L++++DL+    F  G   ++ +D+LG VYEYF+A+FA +EG  +GE
Sbjct  113  PKEYARPALDKEKLGDIIDLFT---FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGE  169

Query  195  FYTPASVVRVIVEVLQPRKGRVYDPCCGSGGMFVQAEKFLDAHDADPTNLSVYGQELNES  254
            FYTP+S+V+++VE+++P KGR+YDPCCGSGGMFVQ+E+F++ H++   ++++YGQE N +
Sbjct  170  FYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPT  229

Query  255  TWRMAKMNLAIHGLNGDLGPHWGDTFAMPYHGDRQMDYVMANPPFNIKDWS--RRESDPR  312
            TW++AKMNLAI+G++ DLG + +DTF    H + + DY++ANPPFN  DW+  R   D R
Sbjct  230  TWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYR  289

Query  313  WVYGVPPAKNANYAWMQHIISKLAPGGMAGVVMANGSMTSTSNGEGDIRAQFVENDLVAA  372
            W +GVPP  NANYAW++H+ISKLAP G AG V+ANGSM++++++E +IR +++E+DLV  
Sbjct  290  WQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVEC  349

Query  373  MVALPDKLFRSTGIPACLWFFAKDKGAGDSGSVDRRGQVLFIDAREMGYMITRAQRGLKA  432
            +V+LP++LF ST IP CLWF++++K  G++G  +R+ ++LFIDARE+G M++R+ + +  
Sbjct  350  IVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRTLKEFSD  407

Query  433  EEIQRIADTFHAWRGMEQLSLATADVTVDDEDSVSASGTEYEDVPGFCKSVSIAEIKDAG  492
            E+IQ++A+T+H+WRG                    +++  YED++GFCK V++ E+K+  
Sbjct  408  EDIQKVAQTYHSWRG--------------------TNDKYYEDIAGFCKVVNLEEVKNNE  447

Query  493  YALTPGRYVGMAGAEEDDEPLDEKIARLTSELNKQLDEATALGATVREQLGRL  545
            Y LTPGRYVG+A+ EED+EP+++K+ R+TSEL+ Q+  +  L   +R  L  L
Sbjct  448  YILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

216) Maqu_3380 in NC_008740


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  444 bits (1673),  Expect = 6e-126, Method: Compositional matrix adjust.
 Identities = 262/564 (47%), Positives = 401/564 (72%), Gaps = 68/564 (12%)

Query  11   ALDDKLWKAADKLRANLDAANYKHVVLGLIFLKYVSDAfeerqeellerfKDQNDDIYY-  69
            ++++KLW+AADKLR+++DAA+YK+V LGLIFLKYVSD+F               ++ Y  
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSF---------------EEKYKE  49

Query  70   LPPEDYDGHEDYQQALLEELEILDYYREANVFWVPKPARWSTLKEKAVLPVGTVLWQDDA  129
            L  + Y ++ED ++           Y   N+FWVPK ARW  ++++A             
Sbjct  50   LKQDPYADEEDQDE-----------YLAENIFWVPKEARWQYINDNA-------------  85

Query  130  GNDVKLRSVSWLIDNALEEIEKSNAKLKGILNR-ISQYQLDNDKLLGLINTFSDTSFTRP  188
                K   ++ LID+A+  IEK N  LKG+L +  ++  LD++KL ++I+ F+       
Sbjct  86   ----KKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEKLGDIIDLFT-------  134

Query  189  VFEGEKLSLHSKDILGHVYEYFLGQFALAEGKQGGQYYTPKSIVTLIVEMLQPYSGRVYD  248
             F       + +D+LG+VYEYF+++FA AEGK++G++YTP SIV L+VEM++PY GR+YD
Sbjct  135  -FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYD  193

Query  249  PAMGSGGFFVSSDKFIEEHASEQHYDAGEQKKHISVYGQESNPTTWRLAAMNMAIRGIDF  308
            P  GSGG FV S++F+E H +        +  +I++YGQESNPTTW+LA MN+AIRGID 
Sbjct  194  PCCGSGGMFVQSERFVEKHQG--------RLDDIAIYGQESNPTTWKLAKMNLAIRGIDN  245

Query  309  NFGKKNADTFLDDQHPDLRADFVMANPPFNIKDWWSESLADDVRWKYGTPPKGNANFGWM  368
            ++G +NADTF +D H +L+AD+++ANPPFN  DW  E L DD RW++G PPKGNAN++W+
Sbjct  246  DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWI  305

Query  369  QHMLHHLAPTGSMALLLANGSMSSNTNNEGEIRKRLVEEDLVECMVALPGQLFTNTQIPA  428
            +HM+  LAP G+ +++LANGSMS++ ++E EIRK L+E+DLVEC+V+LPGQLF +TQIP 
Sbjct  306  EHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPV  365

Query  429  CIWFLTKDKANGMVRNEKKRDRREEFLFIDARNLGFMRDRVLRDFTNDDVAKIADTFHAW  488
            C+WF++++K+     ++ K++R++E+LFIDAR++G M  R L++F+++D+ K+A+T+H+W
Sbjct  366  CLWFISNNKG-----QNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSW  420

Query  489  QRGEG--YEDVAGFCKSASLDEIKKHDFVLTPGRYVGAQEQEDDGEPFAEKMARLTGQLR  546
            +  ++  YED+AGFCK  +L+E+K+++++LTPGRYVG  + E+D EPF +KM R+T++L 
Sbjct  421  RGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELS  480

Query  547  EQFAESDRLEAEIKRNLGGLGYEL  570
            EQFA S  LE +I+++L GLGY +
Sbjct  481  EQFAKSKELEDQIRKSLEGLGYGV  504

217) Desaf_3447 in NC_016629


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  444 bits (1673),  Expect = 7e-126, Method: Compositional matrix adjust.
 Identities = 272/555 (50%), Positives = 391/555 (71%), Gaps = 57/555 (10%)

Query  9    SELVYADTLWKAADTLRGQVDAAEYKHVVLGLLFLKYISDSFEARREELQAELQTDGITE  68
            + + + + LW+AAD LRG +DAAEYK+V LGL+FLKY+SDSFE +  EL+ +  +D    
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADE---  58

Query  69   PQLTALLENRDEYTAERVFWVPPEARWANLQNQatradiatliddailaiERDNPNLKSK  128
                   E++DEY AE +FWVP EARW  ++++A +++I+ LID A++AIE++N +LK+ 
Sbjct  59   -------EDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGV  111

Query  129  LPRDYARRGIESGRLKRLIELIADVGFK--GDRAKARDTLGRVYEYFLGKFAQAEGKLGG  186
            LP++YAR +++  +L  +I+L++   FK  +  ++ +D LGRVYEYF++KFA AEGK +G
Sbjct  112  LPKEYARPALDKEKLGDIIDLFT---FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAG  168

Query  187  EFYTPRCVVRLLVEMIEPYNGRVYDPCCGSGGMFVQSERFVEAHGGQKTDISIFGQESNP  246
            EFYTP  +V+LLVEMIEPY+GR+YDPCCGSGGMFVQSERFVE H G+  DI+I+GQESNP
Sbjct  169  EFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNP  228

Query  247  TTWRLAHMNLAIRSIEANLGSQPADTFLRNLHSDLRADYILANPPFNVSDWSGKLLQDDV  306
            TTW+LA MNLAIR+I+ +LG + ADTF  +LH +L+ADYILANPPFN SDW+   L DD 
Sbjct  229  TTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDY  288

Query  307  RWRYGTPPLGNANYAWIQHFIHHLALPNGRGGGVAGFVMANGSLSSNAGGEGEIRQRIVE  366
            RW++G PP GNANYAWI+H I  LA       G AGFV+ANGS+S+++ +E EIR+ ++E
Sbjct  289  RWQFGVPPKGNANYAWIEHMISKLA-----PNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  367  ADLVDAIVALPAQLFFTTGIPVCLWFLTRDKTGKNLKNGCPNRPDGRKGETLFIDARKLG  426
             DLV+ IV+LP+QLF++T IPVCLWF++ +K  +  K+        RK E LFIDAR +G
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKKE--------RKNEILFIDAREIG  395

Query  427  IMQTRTLRVLTGGDSGETLLADGIGDPKPDSDIGRIVYAFRQWRGEPKPEWWDEEKHGGW  486
             M +RTL+ ++                  D DI ++  +++ WRG        ++K    
Sbjct  396  HMVSRTLKEFS------------------DEDIQKVAQTYHSWRG-------TNDKY---  427

Query  487  AYCDISGFCKATHIEEIKEQGFVLTPGRYVGAEEQANDNEPFIEKYPQLLAELEECFVEG  546
             Y DI+GFCK  ++EE+K++ ++LTPGRYVG  +  +D+EPF +K  ++ +EL E F  +
Sbjct  428  -YEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKS  486

Query  547  QRLTAEVRRILGGVA  561
            + L  ++R+ L G++
Sbjct  487  KELEDQIRKSLEGLG  501

218) AMIS_67070 in NC_017093


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  443 bits (1670),  Expect = 1e-125, Method: Compositional matrix adjust.
 Identities = 259/524 (50%), Positives = 388/524 (75%), Gaps = 28/524 (5%)

Query  18   STKQIQDILWKAADKLRGSMDAAQYKEFVLGLVFLKYVSDAFAERRAQIAEELTDMPEDR  77
            +T  +++ LW+AADKLRGSMDAA+YK+  LGL+FLKYVSD+F E+  ++ ++    +++ 
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQD--PYADE-  58

Query  78   RAEFLDERDEYTAENVFWVPEIARWDYLVENAPN-GVGMLLDDAMDAVMRENPPLIGVLP  136
                 +++DEY AEN+FWVP  ARW+Y+ +NA +  +G L+D AM A+ +EN +L GVLP
Sbjct  59   -----EDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLP  113

Query  137  KIFNRDNVDQKRLKELVDLISDARFT-GHGERSAQDVLGEVYEYFLEKFARAEGKRAGEF  195
            K + R  +D+ +L +++DL++   F  G+ E   QDVLG VYEYF+ KFA AEGK AGEF
Sbjct  114  KEYARPALDKEKLGDIIDLFT---FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEF  170

Query  196  YTPASVVKLIVEILEPYEGRVYDPCCGSGGMFVQAGKFVAAHAGRDHTHDIAVYGQEANE  255
            YTP+S+VKL+VE++EPY GR+YDPCCGSGGMFVQ+ +FV  H GR   +DIA+YGQE+N 
Sbjct  171  YTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGR--LDDIAIYGQESNP  228

Query  256  RTWRLAKMNLAIHGMDPKGIGDRWADTFAEDKHPDMQADFIMANPPFNMSDWARKE--TD  313
             TW+LAKMNLAI+G+D +++G+R ADTF +D H +++AD+I+ANPPFN SDW++     D
Sbjct  229  TTWKLAKMNLAIRGID-NDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDD  287

Query  314  QRWRYGVPPQSNANYAWLQHMVSKLGDRGSAGVVLANGSMSSKQSGEGEIRREMIEQDLI  373
             RW++GVPP++NANYAW++HM+SKL+  G+AG VLANGSMS+   +E EIR+++IEQDL+
Sbjct  288  YRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLV  347

Query  374  ACMVALPPNLFRTTAIPACLWFLTKDKSSQGNRALTDRRGQTLFINAQASGTMVDRTERI  433
             C+V+LP +LF +T IP CLWF++++K+ +G++   +R+ + LFI+A+  G MV RT + 
Sbjct  348  ECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKK---ERKNEILFIDAREIGHMVSRTLKE  404

Query  434  LTDTDLSRIADTYHSWRGTKSAKAKGQAYQDVPGFCYSATLDEIGAFDHVLTPGWYVgat  493
            ++D D+ ++A+TYHSWRGT     +++ Y+D++GFC    L+E+   + +LTPG+YV   
Sbjct  405  FSDEDIQKVAQTYHSWRGT-----NDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYV--G  457

Query  494  egeeeseaeppaDRIERLTKDLYAHFDESSRIQALIREQLGGIN  537
             ++ E + EP  +++ R+T +L  +F  S  ++  IR  L G+ 
Sbjct  458  LADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLG  501

219) Ndas_3080 in NC_014210


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  443 bits (1668),  Expect = 2e-125, Method: Compositional matrix adjust.
 Identities = 266/531 (51%), Positives = 391/531 (74%), Gaps = 35/531 (6%)

Query  14   GSKDLKDTLWKAADKLRGSMDAAEYKHFVLGLIFLKYVSDAFAERRVHIEKELREEGGYS  73
            ++ ++ + LW+AADKLRGSMDAAEYK+  LGLIFLKYVSD+F E+     KEL+++  Y+
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKY----KELKQDP-YA  56

Query  74   ETDIAETLEDREEYIGYGVFWVPQAARWEAIAERAKTGAGEDGVGKLLDDAMKAVANTNP  133
            +       ED++EY++  +FWVP+ ARW+ I + AK       +G+L+D AM A+ + N 
Sbjct  57   DE------EDQDEYLAENIFWVPKEARWQYINDNAKKPE----IGQLIDKAMIAIEKENE  106

Query  134  SLRNSLPQGLFNARGVDERRLGELVDLINRIGFGDQLDPDGNRRSARDVLGEVYEYCLGK  193
            SL+  LP+  +   ++D  +LG+++DL     F  +L+   +R+  +DVLG VYEY ++K
Sbjct  107  SLKGVLPKE-YARPALDKEKLGDIIDL-----FTFKLGDTESRK--QDVLGRVYEYFIAK  158

Query  194  FALAEGRRGGEYYTPACVVELIVAMLEPQKGERVYDPACGSGGMFVQAEKFVESHGGNAR  253
            FA AEG+ +GE+YTP+ +V L+V M+EP KG R+YDP CGSGGMFVQ+E+FVE H G   
Sbjct  159  FASAEGKNAGEFYTPSSIVKLLVEMIEPYKG-RIYDPCCGSGGMFVQSERFVEKHQGRLD  217

Query  254  DIAVYGQELNQNTWRLAKMNLAIHGISADLGTKWDDTFHNDHHPDLRAHVVMANPPFNIS  313
            DIA+YGQE N  TW+LAKMNLAI+GI  DLG +  DTFHND H +L+A+ ++ANPPFN S
Sbjct  218  DIAIYGQESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNAS  277

Query  314  DWGGDRLVMDPRWQWGVPPVGNANYAWLQHMAYKLAPKAGRAGIVLANGSMSSKQSGEGD  373
            DWG +RL+ D RWQ GVPP GNANYAW++HM  KLAP+ G AG+VLANGSMS+   +E +
Sbjct  278  DWGQERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPN-GTAGFVLANGSMSTSGKDELE  336

Query  374  IRRAMVEDGLVACMVALPGQLFRSTQIPACVWILAKDRGAKGGRGSIDRTGQVLFIDARE  433
            IR+ ++E++LV C+V+LPGQLF STQIP C+W++++++G +G +   +R  ++LFIDARE
Sbjct  337  IRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKK---ERKNEILFIDARE  393

Query  434  LGEMVTRTEKQLTEDEIKQISNTFHAWLGTSSAKRNGLTYEDIGGFCKSVSLDEIREHDF  493
            +G+MV+RT K++++++I+++++T+H+W GT+        YEDI+GFCK V+L+E++++++
Sbjct  394  IGHMVSRTLKEFSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCKVVNLEEVKNNEY  448

Query  494  ILTPGRYVGaaeveedpdaepldeKVARLQKELFEHFDASARLEAVVREQL  544
            ILTPGRYVG    + + D EP+++K+ R+  EL E+F  S  LE  +R  L
Sbjct  449  ILTPGRYVG--LADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSL  497

220) hsdM1 in NC_010545


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  442 bits (1664),  Expect = 3e-125, Method: Compositional matrix adjust.
 Identities = 265/522 (51%), Positives = 391/522 (75%), Gaps = 28/522 (5%)

Query  9    FEDTLWKAADKLRGSMDASQYKDIVLGLVFLKYVTdafdarrlellaeleeegataeeia  68
            FE+ LW+AADKLRGSMDA++YK++ LGL+FLKYV+D+F+ +  EL  +   +    +E  
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDE--  63

Query  69   eeledrdaYLEKNVFWVAKEARWDYLQRHSKGKTDDAGGEFKSIGKLIDEAAEALMTDNL  128
                    YL  N+FWV+KEARW+Y++ ++K K +        IG+LID A  A+  +N 
Sbjct  64   --------YLAENIFWVPKEARWQYINDNAK-KPE--------IGQLIDKAMIAIEKENE  106

Query  129  SLEGTLPHNYNSDSVDQRRLGELVDLFSTTRFTAEGPERARDLLGEVYEYFLARFASAEG  188
            SL G LP +Y   ++D+ +LG+++DLF+     ++   R +D+LG VYEYF+A+FASAEG
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLFTFK--LGDTESRKQDVLGRVYEYFIAKFASAEG  164

Query  189  KRGGEFYTPRSVVRTLVEILEPTEGRVYDPCCGSGGMFVQAEKFLDAHDKDPSAIAIYGQ  248
            K +GEFYTP S+V+ LVE++EP  GR+YDPCCGSGGMFVQ+E+F++ H+     IAIYGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  249  ELNERTWRLARMNLAIHALNSKGLGERWGDTFARDIHPGVEMDYVLANPPFNIKDWVRNT  308
            E N  TW+LA+MNLAI+++++ +LGER +DTF  D+H G+  DY+LANPPFN  DW ++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  309  --DDKRWSYGVPPAKNANFGWMQHIISKLSAQGEAGVVMANGTMTSNTSGEGEIRKNMLE  366
              DD RW +GVPP  NAN++W++H+ISKL+++G AG V+ANG+M+++  +E EIRKN++E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  367  DDIVSCVVTLPAQLFRGTQIPVCVWFFAKDKGAGSKGFVDRRGEFLLIDARELGHMVDRT  426
            +D+V C+VTLP+QLF +TQIPVC+WF++++KG  +K   +R+ E+L+IDARE+GHMV RT
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKK--ERKNEILFIDAREIGHMVSRT  401

Query  427  ERTFSDEDIQKIANTFRTWRGRSSAEGEYEDAPGYCKSVSLDEIREADYALTPGRYVGFA  486
             + FSDEDIQK+A+T+++WRG  + +  YED +G+CK V+L+E+++ +Y LTPGRYVG+A
Sbjct  402  LKEFSDEDIQKVAQTYHSWRG--TNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLA  459

Query  487  eeeedgepideKIARLTAELTAALDESARLNAVVREQLGRLG  528
            + EED EP+++K+ R+T+EL+  +  S  L+  +R  L  LG
Sbjct  460  DVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLG  501

221) CYCME_0988 in NC_021917


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  442 bits (1666),  Expect = 3e-125, Method: Compositional matrix adjust.
 Identities = 263/573 (46%), Positives = 397/573 (70%), Gaps = 79/573 (13%)

Query  12   LDVKLWASADRLRNNLDAANYKHVVLGLIFLKYVSDAFEERQEELRHLFTQDVPFPNGDD  71
            ++ KLW +AD+LR ++DAA+YK+V LGLIFLKYVSD+FEE+  EL++             
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQ-------------  52

Query  72   NIYYMPREDYESDEEYNEAVNAELELHEYYQEKNVFWVPKQARWEFLKSSAALPIGTEIE  131
                   + Y  +E+           ++ Y   N+FWVPK+ARW++++ +A  P      
Sbjct  53   -------DPYADEED-----------QDEYLAENIFWVPKEARWQYINDNAKKP------  88

Query  132  LESGDKFKLTSISKLIDNALESIETYKIDDKLANPKLKGVLPR-ISRYEVDNHNLTELIN  190
                       I++LID+A+ +IE         N  LKGVLP+  +R  +D+++L ++I+
Sbjct  89   ----------EIGQLIDKAMIAIEK-------ENESLKGVLPKEYARPALDKEKLGDIID  131

Query  191  RFSDTSFRNPEYNGEKLDLHSKDILGHVYEYFLGQFALAEGKQGGQYYTPKSIVTLIVEM  250
             F+   F+  + ++ K     +D+LG+VYEYF+++FA AEGK++G++YTP SIV L+VEM
Sbjct  132  LFT---FKLGDTESRK-----QDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEM  183

Query  251  LQPYQGRVYDPAMGAGGFFVSNDKFIEAHAADKHYNAADQRKHISVYGQESNPTTWKLAA  310
            ++PY+GR+YDP  G+GG FV +++F+E H +        +  +I++YGQESNPTTWKLA 
Sbjct  184  IEPYKGRIYDPCCGSGGMFVQSERFVEKHQG--------RLDDIAIYGQESNPTTWKLAK  235

Query  311  MNMAIRGIDFNFGKKNADTFLDDQHPDLRADFVMANPPFNIKDWWHAKLEGDIRWKHGTP  370
            MN+AIRGID ++G +NADTF +D H +L+AD+++ANPPFN  DW + +L +D RW+ G P
Sbjct  236  MNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVP  295

Query  371  PQGNANYGWIQHMLHHLNDNGSMGLLLANGSMSSNTNNEGEIRKALIEADLVECMVALPG  430
            P+GNANY+WI+HM+  L  NG+ G++LANGSMS++ ++E EIRK LIE DLVEC+V+LPG
Sbjct  296  PKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPG  355

Query  431  QLFTNTQIPACIWFLTKNKKGGTSPTQKGKRDRRGETLFIDARNLGFMKDRVLRDFTNDD  490
            QLF +TQIP C+WF+++NK       Q+GK++R+ E LFIDAR++G M  R L++F+++D
Sbjct  356  QLFYSTQIPVCLWFISNNK------GQNGKKERKNEILFIDAREIGHMVSRTLKEFSDED  409

Query  491  IAKIADVFHAWQSGTG--YEDEKGFCFSAKLEDLKKHDYVLTPGRFVGAADAEEDSEPFP  548
            I K+A+ +H+W++  +  YED  GFC   +LE++K+++Y+LTPGR+VG AD EED EPF 
Sbjct  410  IQKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFE  469

Query  549  EKMQRLTAQLKSQFEESDRLEKAIKDNLAGIGY  581
            +KM+R+T++L  QF  S  LE  I+ +L G+GY
Sbjct  470  QKMKRITSELSEQFAKSKELEDQIRKSLEGLGY  502

222) BN4_12245 in NC_020409


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  442 bits (1663),  Expect = 4e-125, Method: Compositional matrix adjust.
 Identities = 256/537 (48%), Positives = 387/537 (73%), Gaps = 41/537 (7%)

Query  14   EKRLWAAACKLLPSLDAAVYKHVVLGLVFLKYVGDSFVQRQEELKAQ-FANPDHEYFldd  72
            E +LW AA KL  S+DAA YK+V LGL+FLKYV+DSF ++  ELK + +A+ +++     
Sbjct  7    EEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ-----  61

Query  73   dledeellndeleeRDYYTEANVFWVPEKGRWSTLLECVKLNPGSKLPWGAEFKSVGNLL  132
                           D Y   N+FWVP  +RW  +      N  +K P       +G+L+
Sbjct  62   ---------------DEYLAENIFWVPKEARWQYI------NDNAKKP------EIGQLI  94

Query  133  DDAMDAIEKENPVLKNVLSKDFARLQVESSKLAEVMDLINTIPFEHESLKAKDILGHVYE  192
            D AM AIEKEN  LK VL+K++AR  ++  KL++++DL+ T+ + +   + +D+LG+VYE
Sbjct  95   DKAMIAIEKENESLKGVLPKEYARPALDKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYE  153

Query  193  YFLGQFAAAEGKKGGQYYTPKSIVTLIVEMLRPYQGRVYDPACGSGGFFVSSEEFVEAHG  252
            YF+++FA+AEGK++G++YTP SIV L+VEM+ PY+GR+YDP CGSGG FV SE FVE H 
Sbjct  154  YFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQ  213

Query  253  GKVGNLSIYGQESNPTTWKLAAMNMAIRGIEFDFGKEPADTFGNDQHADKRFDYIMANPP  312
            G++++++IYGQESNPTTWKLA MN+AIRGI+ D+G   ADTF ND H + + DYI+ANPP
Sbjct  214  GRLDDIAIYGQESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPP  273

Query  313  FNISGWGANKLADDVRWKYGLPPDSNANFAWMQHMIHHLGPKGKMALLLANGSMSTATNG  372
            FN S+WG ++L DD RW++G+PP +NAN+AW++HMI  L+P+G  +++LANGSMST+ ++
Sbjct  274  FNASDWGQERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKD  333

Query  373  EADIRRQIVDADLVECIVALPGQLFTNTQIPACIWFLNKDKSNGQNIETLRDRTGEVLFI  432
            E +IR+++++ DLVECIV+LPGQLF +TQIP C+WF++++K++  +    ++R  E+LFI
Sbjct  334  ELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNGK----KERKNEILFI  389

Query  433  DARNCGYMIDRVLRDLDREKDILRIAHTLLNWQMGDKAETPYADEAGFCASVELKDIRKH  492
            DAR+ G M+ R L+++  + DI ++A+T  +W+  +  +  Y D AGFC  V+L +++++
Sbjct  390  DAREIGHMVSRTLKEFS-DEDIQKVAQTYHSWR--GTNDKYYEDIAGFCKVVNLEEVKNN  446

Query  493  DYVLTPGRYVGAPEEVDDGIPFGEKMAVLTSTLFEQMAEGQRLDGEIRANLEKLGYA  549
            +Y+LTPGRYVG ++  +D  PF +KM  +TS L EQ A ++ L+++IR +LE LGY+
Sbjct  447  EYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYG  503

223) EpC_05870 in NC_012214


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  442 bits (1664),  Expect = 4e-125, Method: Compositional matrix adjust.
 Identities = 268/560 (48%), Positives = 395/560 (71%), Gaps = 64/560 (11%)

Query  12   LDSKFWKAADKLRANMDAANYKHVVLGLIFLKYVSDAFEARQQELTKLFRQVGNADNTYA  71
            ++ K+W+AADKLR++MDAA+YK+V LGLIFLKYVSD+FE + +EL               
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELK--------------  51

Query  72   IPREEYDSEAEYQQAIDQELEVEDYYAEKNVFWVPKAARWETLKSQAALPVGSVLGRDEN  131
                        Q++  +E + ++Y AE N+FWVPK ARW+ ++ +A  P          
Sbjct  52   ------------QDPYADEEDQDEYLAE-NIFWVPKEARWQYINDNAKKP----------  88

Query  132  GKELKLRSVSLLIDNALDKIEQSNGKLKGVLNR-IAHYQLGNEVLIGLINTFSDANFSNP  190
                    ++ LID+A+  IE+ N  LKGVL +  A+  L++E L ++I+ F+       
Sbjct  89   -------EIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEKLGDIIDLFT-------  134

Query  191  QYNGEQLKLSSKDILGHVYEYFLGQFALAEGKQGGQYYTPKSIVTLIVEMLQPYQGRVYD  250
             ++  +     +D+LG+VYEYF+++FA AEGK++G++YTP SIV L+VEM++PY+GR+YD
Sbjct  135  -FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYD  193

Query  251  PAMGSGGFFVSSDRFIEQHADAQRYNAAEQKQKIVVYGQESNPTTWRLAAMNMAIRGIDF  310
            P  GSGG FV S+RF+E+H +        + + I +YGQESNPTTW+LA MN+AIRGID 
Sbjct  194  PCCGSGGMFVQSERFVEKHQG--------RLDDIAIYGQESNPTTWKLAKMNLAIRGIDN  245

Query  311  DFGTKNADTLLDDQHPDLRADFVMANPPFNMKEWWSAKLENDVRWQYGTPPQGNANFAWM  370
            D+G +NADT+ +D H +L+AD+++ANPPFN  +W   +L +D RWQ+G PP+GNAN+AW+
Sbjct  246  DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWI  305

Query  371  QHMIHHLAPQGSMALLLANGSMSSNTNNEGEIRRKLVEADLVECMVALPGQLFTNTQIPA  430
            +HMI  LAP+G+ +++LANGSMS++ ++E EIR++L+E DLVEC+V+LPGQLF +TQIP 
Sbjct  306  EHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPV  365

Query  431  CIWLLTKNKSGGNGKAHRKGEVLFIDARQTGFMKDRVLRDFTTEDIAKIAATFHAWQTDK  490
            C+W++++NK G NGK +RK E+LFIDAR+ G M  R L++F+ EDI K+A T+H+W+  +
Sbjct  366  CLWFISNNK-GQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGTN  424

Query  491  D--YQDQAGFCFAASLADIQKNDFVLTPGRYVGAAEQEEDAEPFAEKMTRLTQQLKVQLA  548
            D  Y+D AGFC   +L ++++N+++LTPGRYVG A+ EED EPF +KM R+T +L  Q+A
Sbjct  425  DKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFA  484

Query  549  ESAELEKQIKANLGGLGYEL  568
             S ELE QI+ +L GLGY +
Sbjct  485  KSKELEDQIRKSLEGLGYGV  504

224) SHJG_6168 in NC_017765


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  438 bits (1648),  Expect = 6e-124, Method: Compositional matrix adjust.
 Identities = 266/532 (50%), Positives = 378/532 (72%), Gaps = 41/532 (7%)

Query  18   LWKSADKLRGSLDAAEYKHFVLGLVFLKYVSDAMEEKREQLEKALRGGSLLAEMGLEGGA  77
            LW++ADKLRGS+DAAEYK+  LGL+FLKYVSD+ EEK     K L+ ++   E       
Sbjct  10   LWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKY----KELKQDPYADE-------  58

Query  78   SEELIQRTVEDPKQYTGAGIFYVPPAARWDEVLKRAKVSTDGPSVGEVIDSAMGTIEKFN  137
                     ED  +Y +  IF VP  ARW+ +   AK     P +G++ID AM +IEK N
Sbjct  59   ---------EDQDEYLAENIFWVPKEARWQYINDNAK----KPEIGQLIDKAMIAIEKEN  105

Query  138  LTLKDTLPKIYNSGRVDETTLAELVKLLDQLTFQSQLSLDGRRTGARDLMGEVYEYFLEQ  197
             +LK+ LPK Y    +D   L++++ L+        + L++  +  +D++G VYEYF+ +
Sbjct  106  ESLKGVLPKEYARPALDKEKLGDIIDLFT-------FKLGDTESRKQDVLGRVYEYFIAK  158

Query  198  FALAEGRKGGEYYTPPSVVQLLVAMLEPQEGERVLDPACGSGGMFVQCEKFVELHEGNRF  257
            FA AEG+++GE+YTP+S+V+LLV M+EP  G R+ DP CGSGGMFVQ E+FVE H+G   
Sbjct  159  FASAEGKNAGEFYTPSSIVKLLVEMIEPYKG-RIYDPCCGSGGMFVQSERFVEKHQGRLD  217

Query  258  NVSVFGQERNQTTWRLAKMNLAIHGIEVDLGEEPADSFHNDQHGDVKADVVLANPPFNIS  317
            +++++GQE N TTW+LAKMNLAI+GI+ DLGE  AD+FHND H ++KAD +LANPPFN S
Sbjct  218  DIAIYGQESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNAS  277

Query  318  DWGGERLVTDDRWKYGTPPAGNANFAWIQHMISKLAVGGRAGIVLANGSMSSKSGGEGDI  377
            DWG ERL+ D RW++G PP GNAN+AWI+HMISKLA  G AG+VLANGSMS+ + +E +I
Sbjct  278  DWGQERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEI  337

Query  378  RRAMIEDDLVACMVALPGQLFRSTQIPACLWFLAESKGKPRGKKPWISPERAGQILFIDA  437
            R+ +IE+DLV C+V+LPGQLF STQIP CLWF++++KG   GKK     ER  +ILFIDA
Sbjct  338  RKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNKG-QNGKK-----ERKNEILFIDA  391

Query  438  RELGYMKTRTMRDLSSEELERIAGTFRVWRGASKETEYKDVPGFCRSVTLEELSEHDFAL  497
            RE+G M +RT++++S E+++++A T++ WRG++ +  Y D++GFC+ V LEE+ ++++ L
Sbjct  392  REIGHMVSRTLKEFSDEDIQKVAQTYHSWRGTN-DKYYEDIAGFCKVVNLEEVKNNEYIL  450

Query  498  TPGRYVGTAEVAEDPNAESIEAKIDRLATLLREQLTESEQLAKVVDEQLKRL  549
            TPGRYVG A+V ED   E++E K+ R+++ L EQ++ S +L   +   L  L
Sbjct  451  TPGRYVGLADVEED--EEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

225) SHJGH_5930 in NC_020895


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  438 bits (1648),  Expect = 6e-124, Method: Compositional matrix adjust.
 Identities = 266/532 (50%), Positives = 378/532 (72%), Gaps = 41/532 (7%)

Query  18   LWKSADKLRGSLDAAEYKHFVLGLVFLKYVSDAMEEKREQLEKALRGGSLLAEMGLEGGA  77
            LW++ADKLRGS+DAAEYK+  LGL+FLKYVSD+ EEK     K L+ ++   E       
Sbjct  10   LWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKY----KELKQDPYADE-------  58

Query  78   SEELIQRTVEDPKQYTGAGIFYVPPAARWDEVLKRAKVSTDGPSVGEVIDSAMGTIEKFN  137
                     ED  +Y +  IF VP  ARW+ +   AK     P +G++ID AM +IEK N
Sbjct  59   ---------EDQDEYLAENIFWVPKEARWQYINDNAK----KPEIGQLIDKAMIAIEKEN  105

Query  138  LTLKDTLPKIYNSGRVDETTLAELVKLLDQLTFQSQLSLDGRRTGARDLMGEVYEYFLEQ  197
             +LK+ LPK Y    +D   L++++ L+        + L++  +  +D++G VYEYF+ +
Sbjct  106  ESLKGVLPKEYARPALDKEKLGDIIDLFT-------FKLGDTESRKQDVLGRVYEYFIAK  158

Query  198  FALAEGRKGGEYYTPPSVVQLLVAMLEPQEGERVLDPACGSGGMFVQCEKFVELHEGNRF  257
            FA AEG+++GE+YTP+S+V+LLV M+EP  G R+ DP CGSGGMFVQ E+FVE H+G   
Sbjct  159  FASAEGKNAGEFYTPSSIVKLLVEMIEPYKG-RIYDPCCGSGGMFVQSERFVEKHQGRLD  217

Query  258  NVSVFGQERNQTTWRLAKMNLAIHGIEVDLGEEPADSFHNDQHGDVKADVVLANPPFNIS  317
            +++++GQE N TTW+LAKMNLAI+GI+ DLGE  AD+FHND H ++KAD +LANPPFN S
Sbjct  218  DIAIYGQESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNAS  277

Query  318  DWGGERLVTDDRWKYGTPPAGNANFAWIQHMISKLAVGGRAGIVLANGSMSSKSGGEGDI  377
            DWG ERL+ D RW++G PP GNAN+AWI+HMISKLA  G AG+VLANGSMS+ + +E +I
Sbjct  278  DWGQERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEI  337

Query  378  RRAMIEDDLVACMVALPGQLFRSTQIPACLWFLAESKGKPRGKKPWISPERAGQILFIDA  437
            R+ +IE+DLV C+V+LPGQLF STQIP CLWF++++KG   GKK     ER  +ILFIDA
Sbjct  338  RKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNKG-QNGKK-----ERKNEILFIDA  391

Query  438  RELGYMKTRTMRDLSSEELERIAGTFRVWRGASKETEYKDVPGFCRSVTLEELSEHDFAL  497
            RE+G M +RT++++S E+++++A T++ WRG++ +  Y D++GFC+ V LEE+ ++++ L
Sbjct  392  REIGHMVSRTLKEFSDEDIQKVAQTYHSWRGTN-DKYYEDIAGFCKVVNLEEVKNNEYIL  450

Query  498  TPGRYVGTAEVAEDPNAESIEAKIDRLATLLREQLTESEQLAKVVDEQLKRL  549
            TPGRYVG A+V ED   E++E K+ R+++ L EQ++ S +L   +   L  L
Sbjct  451  TPGRYVGLADVEED--EEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

226) hsdM in NC_019951


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  437 bits (1644),  Expect = 1e-123, Method: Compositional matrix adjust.
 Identities = 257/524 (50%), Positives = 385/524 (74%), Gaps = 31/524 (5%)

Query  18   LKDTLWKAADKLRGSVSASQYKDVILGLVFLKYVSDAYDerreairaelaaDGMEESQIE  77
            + + LW+AADKLRGS+ A++YK+V LGL+FLKYVSD+++E+          +  +++  +
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYK--------ELKQDPYAD  57

Query  78   DLIDDPEEYQGYGVFVVPVSARWKFLAENTKGKPAVGGEPAKNIGQLIDEAMDAVMKANP  137
            +  +D +EY +  +F VP  ARW+++ +N+K KP        +IGQLID AM A+ K N 
Sbjct  58   E--EDQDEYLAENIFWVPKEARWQYINDNAK-KP--------EIGQLIDKAMIAIEKENE  106

Query  138  TLGGTLPRLYNKDNIDQRRLGELIDLFNSARFSRQGEHRARDLMGEVYEYFLGNFARAEG  197
            +L G LP+ Y +  +D+ +LG++IDLF + +++ + E R +D++G VYEYF+++FA AEG
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLF-TFKLG-DTESRKQDVLGRVYEYFIAKFASAEG  164

Query  198  KRGGEFFTPPSVVKVIVEVLEPSSGRVYDPCCGSGGMFVQTEKFIYEHDGDPKDVSIYGQ  257
            K +GEF+TP+S+VK++VE++EP  GR+YDPCCGSGGMFVQ+E+F+  H+G   D++IYGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  258  ESIEETWRMAKMNLAIHGIDNTGLGARWGDSFARDQHPDVRMDYVMANPPFNIKDWARNE  317
            ES   TW++AKMNLAI+GIDN +LG R +D+F  D H +++ DY++ANPPFN  DW+++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  318  --EDPRWRFGVPPANNANYAWIQHILYKLAPGGRAGVVMAngsmssnsngegDIRAQIVE  375
              +D RW+FGVPP  NANYAWI+H++ KLAP G AG V+ANGSMS+++++E +IR +++E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  376  ADLVSCMVALPTQLFRSTGIPVCLWFFAKDKAAGKQGSIDRCGQVLFIDARELGYMVDRA  435
             DLV C+V+LP QLF ST IPVCLWF++++K  G++G  +R  ++LFIDARE+G MV R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRT  401

Query  436  ERALTNEEIVRIGDTYHAWRGSKSAAAKGIMYEDVPGFCKSATLAEIKATDYALTPGRYV  495
             + +++E+I ++++TYH+WRG++        YED++GFCK   L E+K  +Y LTPGRYV
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  496  GTPAVEDDGEPIDEKMARLTKALLEAFDESARLERVVREQLGRL  539
            G + VE+D EP+++KM R+T  L E F  S  LE  +R  L  L
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

227) Acav_4677 in NC_015138


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  435 bits (1639),  Expect = 3e-123, Method: Compositional matrix adjust.
 Identities = 273/517 (53%), Positives = 373/517 (73%), Gaps = 29/517 (5%)

Query  8    TLWATADKLRANMDAAEYKHLVLGLIFLKYISDTFtartaelaarlrDPDDEYFYGDASD  67
             LW +ADKLR++MDAAEYK++ LGLIFLKY+SD+F  +                Y +  +
Sbjct  9    KLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEK----------------YKELKQ  52

Query  68   EDIAAELEDRDYYTSANVFWVPeaarweairaaaKQTTIGKHIDDALGLIEAENPKLKGI  127
            +  A E ED+D Y + N+FWVP  ARW+ I   AK+  IG+ ID A+  IE EN  LKG+
Sbjct  53   DPYADE-EDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGV  111

Query  128  LDKRYARAQLPGGKLGELVDLVSTIGFGTDPAVARDVLGQVYEYFLGMFASAEGKRGGQF  187
            L K YAR+ L   KLG+++DL  T+ +G   +  +DVLG+VYEYF++ FASAEGK +G+F
Sbjct  112  LPKEYARPALDKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEF  170

Query  188  YTPASIVKTLVAVLAPHHGKVYDPCCGSGGMFVQSEKFIEAHGGKLGDVSIYGQEANPTT  247
            YTP+SIVK LV ++ P  G++YDPCCGSGGMFVQSE+F+E H G+L+D++IYGQE+NPTT
Sbjct  171  YTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTT  230

Query  248  WRLAAMNLAIRGIDFNLGREPADTFTHNQHPDLRADYILANPPFNISDWWHGSLAGDARW  307
            W+LA MNLAIRGID +LG   ADTF ++ H +L+ADYILANPPFN SDW +  L +D RW
Sbjct  231  WKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRW  290

Query  308  HYGDPPQGNANYAWLQHMLHHLKPTGRAGIVLANGSMSSSQNNEGVIRaamvdadvvevm  367
            ++G PP+GNANYAW++HM+  L P G AG+VLANGSMS+S ++E  IR  +++ D+VE +
Sbjct  291  QFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECI  350

Query  368  vaLPGQLFFNTQIPACLWFLSQ------RKKRKGEVLFIDARKLGKMISRVQAELDDaai  421
            V+LPGQLF++TQIP CLWF+S+      +K RK E+LFIDAR +G M+SR   E+ D  I
Sbjct  351  VTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDI  410

Query  422  ariaetvaaWRGEVEAGATITTYADVPGFCRSVPLPEIAQHGHVLTPGRYVGAEAVENDD  481
             ++A+T  +WRG  +       Y D++GFC+ V L E+ ++  +LTPGRYVG   VE+D+
Sbjct  411  QKVAQTYHSWRGTND-----KYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDE  465

Query  482  EAFAEKMQKLTEKLGEQMAKGAELDALIRQKLGGLGY  518
            E+F +KM+++T  L+EQ AK+ EL+  IR+ L GLGY
Sbjct  466  EPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGY  502

228) hsdM in NC_004578


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  435 bits (1639),  Expect = 3e-123, Method: Compositional matrix adjust.
 Identities = 263/521 (51%), Positives = 378/521 (73%), Gaps = 29/521 (5%)

Query  59   LEKTLWATADKMRANMDPAEYKHIVLGLIFLKYISDSFAGRRAELERKFSdagddyylgg  118
            +E  LW +ADK+R++MD+AEYK++ LGLIFLKY+SDSF  +  EL +             
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQD------------  53

Query  119  ddptyLASELEERDYYKEVNVFWVPEPARWESLRAAAKQVDIGKRIDDALADIEAENPQL  178
                  A E ++ +Y  E N+FWVP  ARW+ +   AK+ +IG+ ID A+  IE EN  L
Sbjct  54   ----PYADEEDQDEYLAE-NIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESL  108

Query  179  KNILDKRYARAQLPDGKLGELVDMISIIGFSSDANKARDLLGQVYEYFLGQFASAEGKRG  238
            K +L K YAR+ L   KLG+++D++++  ++   ++ +D+LG+VYEYF+++FASAEGK +
Sbjct  109  KGVLPKEYARPALDKEKLGDIIDLFTF-KLGDTESRKQDVLGRVYEYFIAKFASAEGKNA  167

Query  239  GQFYTPASIVKTLVAVLNPHHGKVYDPCCGSGGMFVQSEKFIEAHGGKLGDVSIYGQESN  298
            G+FYTP+SIVK LV +++P  G++YDPCCGSGGMFVQSE+F+E H G+L+D++IYGQESN
Sbjct  168  GEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESN  227

Query  299  PTTWRLAAMNLAIRGMDFNLGKEPADSFIRNQHSDLRADFVLANPPFNISDWWHGSLDGD  358
            PTTW+LA MNLAIRG+D +LG   AD+F  + H +L+AD++LANPPFN SDW +  L +D
Sbjct  228  PTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDD  287

Query  359  SRWVYGTPPQGNANYAWLQHMLFHLKSSGRAGIVLANGSMSSSQNSEGDIRRamveadvv  418
             RW +G PP+GNANYAW++HM+  L ++G AG+VLANGSMS+S + E +IR+ ++E D+V
Sbjct  288  YRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLV  347

Query  419  evmvaLPGQLFFNTQIPACLWFLAKQ-----KNKRPGEVLFIDARKLGTNISRVQIELLD  473
            E +V+LPGQLF++TQIP CLWF++++     K+ R  E+LFIDAR +G  +SR   E+ D
Sbjct  348  ECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSD  407

Query  474  SDIESIAQTVANWRGVPLEVDGEIAEYADVAGFCRSVPLAEIAEHGHVLTPGRYVGaeav  533
             DI+ +AQT  +WRG       +   Y D+AGFC+ V L E+ ++  +LTPGRYVG   V
Sbjct  408  EDIQKVAQTYHSWRGT------NDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADV  461

Query  534  edddeafadKMQDLTALLGEQLAKGTELDQLIRHKLGGLGY  574
            E+D+E+F +KM+ +T+ L+EQ+AK+ EL++ IR  L GLGY
Sbjct  462  EEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGY  502

229) hsdM in NC_011852


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  435 bits (1639),  Expect = 3e-123, Method: Compositional matrix adjust.
 Identities = 258/540 (48%), Positives = 384/540 (72%), Gaps = 52/540 (9%)

Query  31   LDADLWKAADKLRQQLDAANYKHIVLGLIFLKYVSDSFSAQQEIIKQRYTDPTSDFYLDP  90
            ++  LW+AADKLR  +DAA+YK++ LGLIFLKYVSDSF        ++Y +      L  
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFE-------EKYKE------LKQ  52

Query  91   TAYSESELADILNAELEERDNYAQDNVFWVPQQARWDEIKVVARANIGDKIWDEKTFKGI  150
             +Y++ E          ++D+Y  +N+FWVP++ARW+ I+  A+               I
Sbjct  53   DPYADEE----------DQDEYLAENIFWVPKEARWQYINDNAKKP------------EI  90

Query  151  ANLIDDAFDAIEQDNPKLKNVIQR-ISPYKVDESILLGLIDLFSDTNFTRPTLDGKPISL  209
            ++LID A  AIE++N  LK V+ +  +   +D   L ++IDLF+   F     +++    
Sbjct  91   GQLIDKAMIAIEKENESLKGVLPKEYARPALDKEKLGDIIDLFT---FKLGDTESRK---  144

Query  210  AAKDILGHVYEYFLGQFALAEGKKGGQYFTPKSIVTLIIEMLEPYKGRIYDPAMGSGGFF  269
              +D+LG+VYEYF+++FA AEGK++G+++TP SIV L++EM+EPYKGRIYDP  GSGG F
Sbjct  145  --QDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMF  202

Query  270  VQTERFIREHQGNVSEVSIFGQEFNPTTWKLAAMNMAIRGIEFDFGKGNADTFSNPQHRD  329
            VQ+ERF+  HQG + +++I+GQE NPTTWKLA MN+AIRGI+ D+G  NADTF N  H++
Sbjct  203  VQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKG  262

Query  330  KKMDFVMANPPFNMKDWWNESLAQDPRWQYGIPPEGNANFAWLQHMIYHLSPNGRMALLL  389
             K D+++ANPPFN  DW +E L +D RWQ+G+PP GNAN+AW++HMI  L+PNG  +++L
Sbjct  263  LKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVL  322

Query  390  ANGSMSSNTNNEGEIRKNILKADLVEAMIALPSQLFTNTQIPACIWILNKNKA------R  443
            ANGSMS++ ++E EIRKN++  DLVE +++LP+QLF +TQIP C+W++++NK+      R
Sbjct  323  ANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKKER  382

Query  444  KGEVLFIDARQLGYMKDRVLRDFTADDIAKVADTYHSWQQSAD--YQNIPAFCYTASLDE  501
            K E+LFIDAR++G M  R L++F+ +DI KVA+TYHSW+ + D  Y++I++FC   +L+E
Sbjct  383  KNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEE  442

Query  502  IAQNDFVLTPGRYVGAAEQEDDGVPFAEKMQELTALLQQQFQQSAELEAKIKANLGGLGY  561
            + +N+++LTPGRYVG A+ E+D  PF +KM+ +T+ L +QF +S ELE +I+ +L GLGY
Sbjct  443  VKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGY  502

230) Sbal223_4473 in NC_011668


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  435 bits (1638),  Expect = 4e-123, Method: Compositional matrix adjust.
 Identities = 264/554 (48%), Positives = 381/554 (69%), Gaps = 57/554 (10%)

Query  12   LEGKLWNAADKLRSTLDAAQYKHAVLGLIFVKYVSDAFKLRQDEIKADIANPEHEYYLDP  71
            +E KLW+AADKLR+++DAA+YK+  LGLIF+KYVSD+F  +  E+K D        Y D 
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDP-------YADE  58

Query  72   ADYSeeelaeeiaieleQRDFYTEKNVFWLPTESRWQFLQDNGPLVIGGAELDINGKAKK  131
             D                +D Y   N+FW+P E+RWQ+++DN+                K
Sbjct  59   ED----------------QDEYLAENIFWVPKEARWQYINDNA----------------K  86

Query  132  ITSVGHLIDNALEGIERDNPKLKGVLNKSYSSLKIDQAKLNELINLIATIPFVHADLNSK  191
               +G+LID+A+ +IE++N  LKGVL K Y+   +D+ KL ++I+L+ T+ + +++   +
Sbjct  87   KPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEKLGDIIDLF-TFKLGDTESRKQ  145

Query  192  DILGHVYEYMLGQFALAEGKKGGQFYTPASIVSLIVEMIEPFEGRVYDPAMGSGGFFVQS  251
            D+LG+VYEY +++FA AEGK++G+FYTP+SIV L+VEMIEP+ GR+YDP  GSGG FVQS
Sbjct  146  DVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQS  205

Query  252  EKFIERHAHEKQVDALTQKHKISIYGQEYNYTTWQLAAMNMAIRGLDYDFGKEPASTYTN  311
            E+F+E+H          + + I+IYGQE N TTW+LA MN+AIRG+D D+G   A T+ N
Sbjct  206  ERFVEKHQ--------GRLDDIAIYGQESNPTTWKLAKMNLAIRGIDNDLGERNADTFHN  257

Query  312  VQHPDLRADFIMANPPFNMKEWNTGVDDNDPRFKYGQPPSGNANFAWMQHMLHHLAPEGS  371
              H +L+AD+I+ANPPFN  +W      +D R ++G PP GNAN+AW++HM+  LAP+G+
Sbjct  258  DLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGT  317

Query  372  QALLLANGSMSSTTNNEGTIRQALIENDLIECMVALPGQLFTNTQIPACIWFLTKNKNPR  431
             +++LANGSMS++ ++E  IR+ LIE+DL+EC+V+LPGQLF +TQIP C+WF+++NK   
Sbjct  318  AGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQN  377

Query  432  VDKAGRKLRGRKGEVLFIDARNLGYMKDRVLRDFSFEDIQKVADVFHAWKTGETVNGVTY  491
              K       RK E+LFIDAR++G M  R L++FS EDIQKVA+ +H+W+     N+  Y
Sbjct  378  GKKE------RKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWR---GTNDKYY  428

Query  492  EDQAGFCKSATLAEIAKHDFVLTPGRYVGAADEIDDGVPFAEKMEMLTTKLSEQFTESAK  551
            ED AGFCK   L E+ +++++LTPGRYVG AD  +D  PF +KM  +T+ LSEQF+ S  
Sbjct  429  EDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKE  488

Query  552  LEAEIKKNLAGLGY  565
            LE +I+K+L GLGY
Sbjct  489  LEDQIRKSLEGLGY  502

231) hsdM in NC_019950


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  434 bits (1633),  Expect = 1e-122, Method: Compositional matrix adjust.
 Identities = 256/524 (49%), Positives = 385/524 (74%), Gaps = 31/524 (5%)

Query  18   LKDTLWKAADKLRGSLSASQYKDVILGLVFLKYVSDAYDerreairaelaaDGMEESQIE  77
            + + LW+AADKLRGS+ A++YK+V LGL+FLKYVSD+++E+          +  +++  +
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYK--------ELKQDPYAD  57

Query  78   DLIDDPEEYQGYGVFVVPVSARWKFLAENTKGKPAVGGEPAKNIGQLIDEAMDAVMKANP  137
            +  +D +EY +  +F VP  ARW+++ +N+K KP        +IGQLID AM A+ K N 
Sbjct  58   E--EDQDEYLAENIFWVPKEARWQYINDNAK-KP--------EIGQLIDKAMIAIEKENE  106

Query  138  TLGGTLPLLYNKDNIDQRRLGELIDLFNSARFSRQGEHRARDLMGEVYEYFLGNFARAEG  197
            +L G LP  Y +  +D+ +LG++IDLF + +++ + E R +D++G VYEYF+++FA AEG
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLF-TFKLG-DTESRKQDVLGRVYEYFIAKFASAEG  164

Query  198  KRGGEFFTPPSVVKVIVEVLEPSSGRVYDPCCGSGGMFVQTEKFIYEHDGDPKDVSIYGQ  257
            K +GEF+TP+S+VK++VE++EP  GR+YDPCCGSGGMFVQ+E+F+  H+G   D++IYGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  258  ESIEETWRMAKMNLAIHGIDNKGLGARWGDTFARDQHPDMQMDYVMANPPFNIKDWARNE  317
            ES   TW++AKMNLAI+GIDN +LG R +DTF  D H +++ DY++ANPPFN  DW+++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  318  --EDPRWRFGVPPANNANYAWIQHILYKLAPGGRAGVVMAngsmssnsngegDIRAQIVE  375
              +D RW+FGVPP  NANYAWI+H++ KLAP G AG V+ANGSMS+++++E +IR +++E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  376  ADLVSCMVALPTQLFRSTGIPVCLWFFAKDKAAGKQGSIDRCGQVLFIDARELGDLVDRA  435
             DLV C+V+LP QLF ST IPVCLWF++++K  G++G  +R  ++LFIDARE+G++V R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRT  401

Query  436  ERALTNEEIVRIGDTFHAWRGSKSAAAKGIMYEDVPGFCKSATLAEIKATDYALTPGRYV  495
             + +++E+I ++++T+H+WRG++        YED++GFCK   L E+K  +Y LTPGRYV
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  496  GTPAVEDDGEPIDEKMARLTKALLEAFDESARLERVVREQLGRL  539
            G + VE+D EP+++KM R+T  L E F  S  LE  +R  L  L
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

232) hsdM in NC_002945


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  434 bits (1635),  Expect = 6e-123, Method: Compositional matrix adjust.
 Identities = 255/524 (49%), Positives = 383/524 (74%), Gaps = 31/524 (5%)

Query  18   LKDTLWKAADKLRGSLSASQYKDVILGLVFLKYVSDAYDerreairaelaaeGMEESQIE  77
            + + LW+AADKLRGS+ A++YK+V LGL+FLKYVSD+++E+            + +    
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYK---------ELKQDPYA  56

Query  78   DLIDDPEQYQGYGVFVVPVSARWKFLAENTKGKPAVGGEPAKNIGQLIDEAMDAVMKANP  137
            D  +D ++Y +  +F VP  ARW+++ +N+K KP        +IGQLID AM A+ K N 
Sbjct  57   D-EEDQDEYLAENIFWVPKEARWQYINDNAK-KP--------EIGQLIDKAMIAIEKENE  106

Query  138  TLGGTLPRLYNKDNIDQRRLGELIDLFNSARFSRQGEHRARDLMGEVYEYFLGNFARAEG  197
            +L G LP+ Y +  +D+ +LG++IDLF + +++ + E R +D++G VYEYF+++FA AEG
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLF-TFKLG-DTESRKQDVLGRVYEYFIAKFASAEG  164

Query  198  KRGGEFFTPPSVVKVIVEVLEPSSGRVYDPCCGSGGMFVQTEKFIYEHDGDPKDVSIYGQ  257
            K +GEF+TP+S+VK++VE++EP  GR+YDPCCGSGGMFVQ+E+F+  H+G   D++IYGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  258  ESIEETWRMAKMNLAIHGIDNKGLGARWSDTFARDQHPDVQMDYVMANPPFNIKDWARNE  317
            ES   TW++AKMNLAI+GIDN +LG R +DTF  D H +++ DY++ANPPFN  DW+++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  318  --EDPRWRFGVPPANNANYAWIQHILYKLAPGGRAGVVMAngsmssnsngegDIRAQIVE  375
              +D RW+FGVPP  NANYAWI+H++ KLAP G AG V+ANGSMS+++++E +IR +++E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  376  ADLVSCMVALPTQLFRSTGIPVCLWFFAKDKAAGKQGSIDRCGQVLFIDARELGDLVDRA  435
             DLV C+V+LP QLF ST IPVCLWF++++K  G++G  +R  ++LFIDARE+G++V R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRT  401

Query  436  ERALTNEEIVRIGDTFHAWRGSKSAAVKGIMYEDVPGFCKSATLAEIKATDYALTPGRYV  495
             + +++E+I ++++T+H+WRG++        YED++GFCK   L E+K  +Y LTPGRYV
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  496  GTPAVEDDGEPIDEKMARLSKALLEAFDESARLERVVREQLGRL  539
            G + VE+D EP+++KM R++  L E F  S  LE  +R  L  L
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

233) K60_028500 in NC_020245


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  434 bits (1635),  Expect = 6e-123, Method: Compositional matrix adjust.
 Identities = 255/524 (49%), Positives = 383/524 (74%), Gaps = 31/524 (5%)

Query  18   LKDTLWKAADKLRGSLSASQYKDVILGLVFLKYVSDAYDerreairaelaaeGMEESQIE  77
            + + LW+AADKLRGS+ A++YK+V LGL+FLKYVSD+++E+            + +    
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYK---------ELKQDPYA  56

Query  78   DLIDDPEQYQGYGVFVVPVSARWKFLAENTKGKPAVGGEPAKNIGQLIDEAMDAVMKANP  137
            D  +D ++Y +  +F VP  ARW+++ +N+K KP        +IGQLID AM A+ K N 
Sbjct  57   D-EEDQDEYLAENIFWVPKEARWQYINDNAK-KP--------EIGQLIDKAMIAIEKENE  106

Query  138  TLGGTLPRLYNKDNIDQRRLGELIDLFNSARFSRQGEHRARDLMGEVYEYFLGNFARAEG  197
            +L G LP+ Y +  +D+ +LG++IDLF + +++ + E R +D++G VYEYF+++FA AEG
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLF-TFKLG-DTESRKQDVLGRVYEYFIAKFASAEG  164

Query  198  KRGGEFFTPPSVVKVIVEVLEPSSGRVYDPCCGSGGMFVQTEKFIYEHDGDPKDVSIYGQ  257
            K +GEF+TP+S+VK++VE++EP  GR+YDPCCGSGGMFVQ+E+F+  H+G   D++IYGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  258  ESIEETWRMAKMNLAIHGIDNKGLGARWSDTFARDQHPDVQMDYVMANPPFNIKDWARNE  317
            ES   TW++AKMNLAI+GIDN +LG R +DTF  D H +++ DY++ANPPFN  DW+++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  318  --EDPRWRFGVPPANNANYAWIQHILYKLAPGGRAGVVMAngsmssnsngegDIRAQIVE  375
              +D RW+FGVPP  NANYAWI+H++ KLAP G AG V+ANGSMS+++++E +IR +++E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  376  ADLVSCMVALPTQLFRSTGIPVCLWFFAKDKAAGKQGSIDRCGQVLFIDARELGDLVDRA  435
             DLV C+V+LP QLF ST IPVCLWF++++K  G++G  +R  ++LFIDARE+G++V R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRT  401

Query  436  ERALTNEEIVRIGDTFHAWRGSKSAAVKGIMYEDVPGFCKSATLAEIKATDYALTPGRYV  495
             + +++E+I ++++T+H+WRG++        YED++GFCK   L E+K  +Y LTPGRYV
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  496  GTPAVEDDGEPIDEKMARLSKALLEAFDESARLERVVREQLGRL  539
            G + VE+D EP+++KM R++  L E F  S  LE  +R  L  L
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

234) hsdM in NC_016804


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  434 bits (1635),  Expect = 6e-123, Method: Compositional matrix adjust.
 Identities = 255/524 (49%), Positives = 383/524 (74%), Gaps = 31/524 (5%)

Query  18   LKDTLWKAADKLRGSLSASQYKDVILGLVFLKYVSDAYDerreairaelaaeGMEESQIE  77
            + + LW+AADKLRGS+ A++YK+V LGL+FLKYVSD+++E+            + +    
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYK---------ELKQDPYA  56

Query  78   DLIDDPEQYQGYGVFVVPVSARWKFLAENTKGKPAVGGEPAKNIGQLIDEAMDAVMKANP  137
            D  +D ++Y +  +F VP  ARW+++ +N+K KP        +IGQLID AM A+ K N 
Sbjct  57   D-EEDQDEYLAENIFWVPKEARWQYINDNAK-KP--------EIGQLIDKAMIAIEKENE  106

Query  138  TLGGTLPRLYNKDNIDQRRLGELIDLFNSARFSRQGEHRARDLMGEVYEYFLGNFARAEG  197
            +L G LP+ Y +  +D+ +LG++IDLF + +++ + E R +D++G VYEYF+++FA AEG
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLF-TFKLG-DTESRKQDVLGRVYEYFIAKFASAEG  164

Query  198  KRGGEFFTPPSVVKVIVEVLEPSSGRVYDPCCGSGGMFVQTEKFIYEHDGDPKDVSIYGQ  257
            K +GEF+TP+S+VK++VE++EP  GR+YDPCCGSGGMFVQ+E+F+  H+G   D++IYGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  258  ESIEETWRMAKMNLAIHGIDNKGLGARWSDTFARDQHPDVQMDYVMANPPFNIKDWARNE  317
            ES   TW++AKMNLAI+GIDN +LG R +DTF  D H +++ DY++ANPPFN  DW+++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  318  --EDPRWRFGVPPANNANYAWIQHILYKLAPGGRAGVVMAngsmssnsngegDIRAQIVE  375
              +D RW+FGVPP  NANYAWI+H++ KLAP G AG V+ANGSMS+++++E +IR +++E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  376  ADLVSCMVALPTQLFRSTGIPVCLWFFAKDKAAGKQGSIDRCGQVLFIDARELGDLVDRA  435
             DLV C+V+LP QLF ST IPVCLWF++++K  G++G  +R  ++LFIDARE+G++V R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRT  401

Query  436  ERALTNEEIVRIGDTFHAWRGSKSAAVKGIMYEDVPGFCKSATLAEIKATDYALTPGRYV  495
             + +++E+I ++++T+H+WRG++        YED++GFCK   L E+K  +Y LTPGRYV
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  496  GTPAVEDDGEPIDEKMARLSKALLEAFDESARLERVVREQLGRL  539
            G + VE+D EP+++KM R++  L E F  S  LE  +R  L  L
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

235) hsdM in NC_008769


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  434 bits (1635),  Expect = 6e-123, Method: Compositional matrix adjust.
 Identities = 255/524 (49%), Positives = 383/524 (74%), Gaps = 31/524 (5%)

Query  18   LKDTLWKAADKLRGSLSASQYKDVILGLVFLKYVSDAYDerreairaelaaeGMEESQIE  77
            + + LW+AADKLRGS+ A++YK+V LGL+FLKYVSD+++E+            + +    
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYK---------ELKQDPYA  56

Query  78   DLIDDPEQYQGYGVFVVPVSARWKFLAENTKGKPAVGGEPAKNIGQLIDEAMDAVMKANP  137
            D  +D ++Y +  +F VP  ARW+++ +N+K KP        +IGQLID AM A+ K N 
Sbjct  57   D-EEDQDEYLAENIFWVPKEARWQYINDNAK-KP--------EIGQLIDKAMIAIEKENE  106

Query  138  TLGGTLPRLYNKDNIDQRRLGELIDLFNSARFSRQGEHRARDLMGEVYEYFLGNFARAEG  197
            +L G LP+ Y +  +D+ +LG++IDLF + +++ + E R +D++G VYEYF+++FA AEG
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLF-TFKLG-DTESRKQDVLGRVYEYFIAKFASAEG  164

Query  198  KRGGEFFTPPSVVKVIVEVLEPSSGRVYDPCCGSGGMFVQTEKFIYEHDGDPKDVSIYGQ  257
            K +GEF+TP+S+VK++VE++EP  GR+YDPCCGSGGMFVQ+E+F+  H+G   D++IYGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  258  ESIEETWRMAKMNLAIHGIDNKGLGARWSDTFARDQHPDVQMDYVMANPPFNIKDWARNE  317
            ES   TW++AKMNLAI+GIDN +LG R +DTF  D H +++ DY++ANPPFN  DW+++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  318  --EDPRWRFGVPPANNANYAWIQHILYKLAPGGRAGVVMAngsmssnsngegDIRAQIVE  375
              +D RW+FGVPP  NANYAWI+H++ KLAP G AG V+ANGSMS+++++E +IR +++E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  376  ADLVSCMVALPTQLFRSTGIPVCLWFFAKDKAAGKQGSIDRCGQVLFIDARELGDLVDRA  435
             DLV C+V+LP QLF ST IPVCLWF++++K  G++G  +R  ++LFIDARE+G++V R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRT  401

Query  436  ERALTNEEIVRIGDTFHAWRGSKSAAVKGIMYEDVPGFCKSATLAEIKATDYALTPGRYV  495
             + +++E+I ++++T+H+WRG++        YED++GFCK   L E+K  +Y LTPGRYV
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  496  GTPAVEDDGEPIDEKMARLSKALLEAFDESARLERVVREQLGRL  539
            G + VE+D EP+++KM R++  L E F  S  LE  +R  L  L
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

236) hsdM in NC_012207


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  434 bits (1635),  Expect = 6e-123, Method: Compositional matrix adjust.
 Identities = 255/524 (49%), Positives = 383/524 (74%), Gaps = 31/524 (5%)

Query  18   LKDTLWKAADKLRGSLSASQYKDVILGLVFLKYVSDAYDerreairaelaaeGMEESQIE  77
            + + LW+AADKLRGS+ A++YK+V LGL+FLKYVSD+++E+            + +    
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYK---------ELKQDPYA  56

Query  78   DLIDDPEQYQGYGVFVVPVSARWKFLAENTKGKPAVGGEPAKNIGQLIDEAMDAVMKANP  137
            D  +D ++Y +  +F VP  ARW+++ +N+K KP        +IGQLID AM A+ K N 
Sbjct  57   D-EEDQDEYLAENIFWVPKEARWQYINDNAK-KP--------EIGQLIDKAMIAIEKENE  106

Query  138  TLGGTLPRLYNKDNIDQRRLGELIDLFNSARFSRQGEHRARDLMGEVYEYFLGNFARAEG  197
            +L G LP+ Y +  +D+ +LG++IDLF + +++ + E R +D++G VYEYF+++FA AEG
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLF-TFKLG-DTESRKQDVLGRVYEYFIAKFASAEG  164

Query  198  KRGGEFFTPPSVVKVIVEVLEPSSGRVYDPCCGSGGMFVQTEKFIYEHDGDPKDVSIYGQ  257
            K +GEF+TP+S+VK++VE++EP  GR+YDPCCGSGGMFVQ+E+F+  H+G   D++IYGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  258  ESIEETWRMAKMNLAIHGIDNKGLGARWSDTFARDQHPDVQMDYVMANPPFNIKDWARNE  317
            ES   TW++AKMNLAI+GIDN +LG R +DTF  D H +++ DY++ANPPFN  DW+++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  318  --EDPRWRFGVPPANNANYAWIQHILYKLAPGGRAGVVMAngsmssnsngegDIRAQIVE  375
              +D RW+FGVPP  NANYAWI+H++ KLAP G AG V+ANGSMS+++++E +IR +++E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  376  ADLVSCMVALPTQLFRSTGIPVCLWFFAKDKAAGKQGSIDRCGQVLFIDARELGDLVDRA  435
             DLV C+V+LP QLF ST IPVCLWF++++K  G++G  +R  ++LFIDARE+G++V R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRT  401

Query  436  ERALTNEEIVRIGDTFHAWRGSKSAAVKGIMYEDVPGFCKSATLAEIKATDYALTPGRYV  495
             + +++E+I ++++T+H+WRG++        YED++GFCK   L E+K  +Y LTPGRYV
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  496  GTPAVEDDGEPIDEKMARLSKALLEAFDESARLERVVREQLGRL  539
            G + VE+D EP+++KM R++  L E F  S  LE  +R  L  L
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

237) hsdM in NC_015848


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  434 bits (1635),  Expect = 6e-123, Method: Compositional matrix adjust.
 Identities = 255/524 (49%), Positives = 383/524 (74%), Gaps = 31/524 (5%)

Query  18   LKDTLWKAADKLRGSLSASQYKDVILGLVFLKYVSDAYDerreairaelaaeGMEESQIE  77
            + + LW+AADKLRGS+ A++YK+V LGL+FLKYVSD+++E+            + +    
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYK---------ELKQDPYA  56

Query  78   DLIDDPEQYQGYGVFVVPVSARWKFLAENTKGKPAVGGEPAKNIGQLIDEAMDAVMKANP  137
            D  +D ++Y +  +F VP  ARW+++ +N+K KP        +IGQLID AM A+ K N 
Sbjct  57   D-EEDQDEYLAENIFWVPKEARWQYINDNAK-KP--------EIGQLIDKAMIAIEKENE  106

Query  138  TLGGTLPRLYNKDNIDQRRLGELIDLFNSARFSRQGEHRARDLMGEVYEYFLGNFARAEG  197
            +L G LP+ Y +  +D+ +LG++IDLF + +++ + E R +D++G VYEYF+++FA AEG
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLF-TFKLG-DTESRKQDVLGRVYEYFIAKFASAEG  164

Query  198  KRGGEFFTPPSVVKVIVEVLEPSSGRVYDPCCGSGGMFVQTEKFIYEHDGDPKDVSIYGQ  257
            K +GEF+TP+S+VK++VE++EP  GR+YDPCCGSGGMFVQ+E+F+  H+G   D++IYGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  258  ESIEETWRMAKMNLAIHGIDNKGLGARWSDTFARDQHPDVQMDYVMANPPFNIKDWARNE  317
            ES   TW++AKMNLAI+GIDN +LG R +DTF  D H +++ DY++ANPPFN  DW+++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  318  --EDPRWRFGVPPANNANYAWIQHILYKLAPGGRAGVVMAngsmssnsngegDIRAQIVE  375
              +D RW+FGVPP  NANYAWI+H++ KLAP G AG V+ANGSMS+++++E +IR +++E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  376  ADLVSCMVALPTQLFRSTGIPVCLWFFAKDKAAGKQGSIDRCGQVLFIDARELGDLVDRA  435
             DLV C+V+LP QLF ST IPVCLWF++++K  G++G  +R  ++LFIDARE+G++V R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRT  401

Query  436  ERALTNEEIVRIGDTFHAWRGSKSAAVKGIMYEDVPGFCKSATLAEIKATDYALTPGRYV  495
             + +++E+I ++++T+H+WRG++        YED++GFCK   L E+K  +Y LTPGRYV
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  496  GTPAVEDDGEPIDEKMARLSKALLEAFDESARLERVVREQLGRL  539
            G + VE+D EP+++KM R++  L E F  S  LE  +R  L  L
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

238) J112_14765 in NC_021054


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  434 bits (1635),  Expect = 6e-123, Method: Compositional matrix adjust.
 Identities = 255/524 (49%), Positives = 383/524 (74%), Gaps = 31/524 (5%)

Query  18   LKDTLWKAADKLRGSLSASQYKDVILGLVFLKYVSDAYDerreairaelaaeGMEESQIE  77
            + + LW+AADKLRGS+ A++YK+V LGL+FLKYVSD+++E+            + +    
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYK---------ELKQDPYA  56

Query  78   DLIDDPEQYQGYGVFVVPVSARWKFLAENTKGKPAVGGEPAKNIGQLIDEAMDAVMKANP  137
            D  +D ++Y +  +F VP  ARW+++ +N+K KP        +IGQLID AM A+ K N 
Sbjct  57   D-EEDQDEYLAENIFWVPKEARWQYINDNAK-KP--------EIGQLIDKAMIAIEKENE  106

Query  138  TLGGTLPRLYNKDNIDQRRLGELIDLFNSARFSRQGEHRARDLMGEVYEYFLGNFARAEG  197
            +L G LP+ Y +  +D+ +LG++IDLF + +++ + E R +D++G VYEYF+++FA AEG
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLF-TFKLG-DTESRKQDVLGRVYEYFIAKFASAEG  164

Query  198  KRGGEFFTPPSVVKVIVEVLEPSSGRVYDPCCGSGGMFVQTEKFIYEHDGDPKDVSIYGQ  257
            K +GEF+TP+S+VK++VE++EP  GR+YDPCCGSGGMFVQ+E+F+  H+G   D++IYGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  258  ESIEETWRMAKMNLAIHGIDNKGLGARWSDTFARDQHPDVQMDYVMANPPFNIKDWARNE  317
            ES   TW++AKMNLAI+GIDN +LG R +DTF  D H +++ DY++ANPPFN  DW+++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  318  --EDPRWRFGVPPANNANYAWIQHILYKLAPGGRAGVVMAngsmssnsngegDIRAQIVE  375
              +D RW+FGVPP  NANYAWI+H++ KLAP G AG V+ANGSMS+++++E +IR +++E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  376  ADLVSCMVALPTQLFRSTGIPVCLWFFAKDKAAGKQGSIDRCGQVLFIDARELGDLVDRA  435
             DLV C+V+LP QLF ST IPVCLWF++++K  G++G  +R  ++LFIDARE+G++V R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRT  401

Query  436  ERALTNEEIVRIGDTFHAWRGSKSAAVKGIMYEDVPGFCKSATLAEIKATDYALTPGRYV  495
             + +++E+I ++++T+H+WRG++        YED++GFCK   L E+K  +Y LTPGRYV
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  496  GTPAVEDDGEPIDEKMARLSKALLEAFDESARLERVVREQLGRL  539
            G + VE+D EP+++KM R++  L E F  S  LE  +R  L  L
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

239) CCDC5180_2499 in NC_017522


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  434 bits (1635),  Expect = 6e-123, Method: Compositional matrix adjust.
 Identities = 255/524 (49%), Positives = 383/524 (74%), Gaps = 31/524 (5%)

Query  18   LKDTLWKAADKLRGSLSASQYKDVILGLVFLKYVSDAYDerreairaelaaeGMEESQIE  77
            + + LW+AADKLRGS+ A++YK+V LGL+FLKYVSD+++E+            + +    
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYK---------ELKQDPYA  56

Query  78   DLIDDPEQYQGYGVFVVPVSARWKFLAENTKGKPAVGGEPAKNIGQLIDEAMDAVMKANP  137
            D  +D ++Y +  +F VP  ARW+++ +N+K KP        +IGQLID AM A+ K N 
Sbjct  57   D-EEDQDEYLAENIFWVPKEARWQYINDNAK-KP--------EIGQLIDKAMIAIEKENE  106

Query  138  TLGGTLPRLYNKDNIDQRRLGELIDLFNSARFSRQGEHRARDLMGEVYEYFLGNFARAEG  197
            +L G LP+ Y +  +D+ +LG++IDLF + +++ + E R +D++G VYEYF+++FA AEG
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLF-TFKLG-DTESRKQDVLGRVYEYFIAKFASAEG  164

Query  198  KRGGEFFTPPSVVKVIVEVLEPSSGRVYDPCCGSGGMFVQTEKFIYEHDGDPKDVSIYGQ  257
            K +GEF+TP+S+VK++VE++EP  GR+YDPCCGSGGMFVQ+E+F+  H+G   D++IYGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  258  ESIEETWRMAKMNLAIHGIDNKGLGARWSDTFARDQHPDVQMDYVMANPPFNIKDWARNE  317
            ES   TW++AKMNLAI+GIDN +LG R +DTF  D H +++ DY++ANPPFN  DW+++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  318  --EDPRWRFGVPPANNANYAWIQHILYKLAPGGRAGVVMAngsmssnsngegDIRAQIVE  375
              +D RW+FGVPP  NANYAWI+H++ KLAP G AG V+ANGSMS+++++E +IR +++E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  376  ADLVSCMVALPTQLFRSTGIPVCLWFFAKDKAAGKQGSIDRCGQVLFIDARELGDLVDRA  435
             DLV C+V+LP QLF ST IPVCLWF++++K  G++G  +R  ++LFIDARE+G++V R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRT  401

Query  436  ERALTNEEIVRIGDTFHAWRGSKSAAVKGIMYEDVPGFCKSATLAEIKATDYALTPGRYV  495
             + +++E+I ++++T+H+WRG++        YED++GFCK   L E+K  +Y LTPGRYV
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  496  GTPAVEDDGEPIDEKMARLSKALLEAFDESARLERVVREQLGRL  539
            G + VE+D EP+++KM R++  L E F  S  LE  +R  L  L
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

240) hsdM in NC_002755


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  434 bits (1635),  Expect = 6e-123, Method: Compositional matrix adjust.
 Identities = 255/524 (49%), Positives = 383/524 (74%), Gaps = 31/524 (5%)

Query  18   LKDTLWKAADKLRGSLSASQYKDVILGLVFLKYVSDAYDerreairaelaaeGMEESQIE  77
            + + LW+AADKLRGS+ A++YK+V LGL+FLKYVSD+++E+            + +    
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYK---------ELKQDPYA  56

Query  78   DLIDDPEQYQGYGVFVVPVSARWKFLAENTKGKPAVGGEPAKNIGQLIDEAMDAVMKANP  137
            D  +D ++Y +  +F VP  ARW+++ +N+K KP        +IGQLID AM A+ K N 
Sbjct  57   D-EEDQDEYLAENIFWVPKEARWQYINDNAK-KP--------EIGQLIDKAMIAIEKENE  106

Query  138  TLGGTLPRLYNKDNIDQRRLGELIDLFNSARFSRQGEHRARDLMGEVYEYFLGNFARAEG  197
            +L G LP+ Y +  +D+ +LG++IDLF + +++ + E R +D++G VYEYF+++FA AEG
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLF-TFKLG-DTESRKQDVLGRVYEYFIAKFASAEG  164

Query  198  KRGGEFFTPPSVVKVIVEVLEPSSGRVYDPCCGSGGMFVQTEKFIYEHDGDPKDVSIYGQ  257
            K +GEF+TP+S+VK++VE++EP  GR+YDPCCGSGGMFVQ+E+F+  H+G   D++IYGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  258  ESIEETWRMAKMNLAIHGIDNKGLGARWSDTFARDQHPDVQMDYVMANPPFNIKDWARNE  317
            ES   TW++AKMNLAI+GIDN +LG R +DTF  D H +++ DY++ANPPFN  DW+++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  318  --EDPRWRFGVPPANNANYAWIQHILYKLAPGGRAGVVMAngsmssnsngegDIRAQIVE  375
              +D RW+FGVPP  NANYAWI+H++ KLAP G AG V+ANGSMS+++++E +IR +++E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  376  ADLVSCMVALPTQLFRSTGIPVCLWFFAKDKAAGKQGSIDRCGQVLFIDARELGDLVDRA  435
             DLV C+V+LP QLF ST IPVCLWF++++K  G++G  +R  ++LFIDARE+G++V R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRT  401

Query  436  ERALTNEEIVRIGDTFHAWRGSKSAAVKGIMYEDVPGFCKSATLAEIKATDYALTPGRYV  495
             + +++E+I ++++T+H+WRG++        YED++GFCK   L E+K  +Y LTPGRYV
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  496  GTPAVEDDGEPIDEKMARLSKALLEAFDESARLERVVREQLGRL  539
            G + VE+D EP+++KM R++  L E F  S  LE  +R  L  L
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

241) J114_14705 in NC_021194


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  434 bits (1635),  Expect = 6e-123, Method: Compositional matrix adjust.
 Identities = 255/524 (49%), Positives = 383/524 (74%), Gaps = 31/524 (5%)

Query  18   LKDTLWKAADKLRGSLSASQYKDVILGLVFLKYVSDAYDerreairaelaaeGMEESQIE  77
            + + LW+AADKLRGS+ A++YK+V LGL+FLKYVSD+++E+            + +    
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYK---------ELKQDPYA  56

Query  78   DLIDDPEQYQGYGVFVVPVSARWKFLAENTKGKPAVGGEPAKNIGQLIDEAMDAVMKANP  137
            D  +D ++Y +  +F VP  ARW+++ +N+K KP        +IGQLID AM A+ K N 
Sbjct  57   D-EEDQDEYLAENIFWVPKEARWQYINDNAK-KP--------EIGQLIDKAMIAIEKENE  106

Query  138  TLGGTLPRLYNKDNIDQRRLGELIDLFNSARFSRQGEHRARDLMGEVYEYFLGNFARAEG  197
            +L G LP+ Y +  +D+ +LG++IDLF + +++ + E R +D++G VYEYF+++FA AEG
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLF-TFKLG-DTESRKQDVLGRVYEYFIAKFASAEG  164

Query  198  KRGGEFFTPPSVVKVIVEVLEPSSGRVYDPCCGSGGMFVQTEKFIYEHDGDPKDVSIYGQ  257
            K +GEF+TP+S+VK++VE++EP  GR+YDPCCGSGGMFVQ+E+F+  H+G   D++IYGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  258  ESIEETWRMAKMNLAIHGIDNKGLGARWSDTFARDQHPDVQMDYVMANPPFNIKDWARNE  317
            ES   TW++AKMNLAI+GIDN +LG R +DTF  D H +++ DY++ANPPFN  DW+++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  318  --EDPRWRFGVPPANNANYAWIQHILYKLAPGGRAGVVMAngsmssnsngegDIRAQIVE  375
              +D RW+FGVPP  NANYAWI+H++ KLAP G AG V+ANGSMS+++++E +IR +++E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  376  ADLVSCMVALPTQLFRSTGIPVCLWFFAKDKAAGKQGSIDRCGQVLFIDARELGDLVDRA  435
             DLV C+V+LP QLF ST IPVCLWF++++K  G++G  +R  ++LFIDARE+G++V R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRT  401

Query  436  ERALTNEEIVRIGDTFHAWRGSKSAAVKGIMYEDVPGFCKSATLAEIKATDYALTPGRYV  495
             + +++E+I ++++T+H+WRG++        YED++GFCK   L E+K  +Y LTPGRYV
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  496  GTPAVEDDGEPIDEKMARLSKALLEAFDESARLERVVREQLGRL  539
            G + VE+D EP+++KM R++  L E F  S  LE  +R  L  L
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

242) M943_14240 in NC_021740


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  434 bits (1635),  Expect = 6e-123, Method: Compositional matrix adjust.
 Identities = 255/524 (49%), Positives = 383/524 (74%), Gaps = 31/524 (5%)

Query  18   LKDTLWKAADKLRGSLSASQYKDVILGLVFLKYVSDAYDerreairaelaaeGMEESQIE  77
            + + LW+AADKLRGS+ A++YK+V LGL+FLKYVSD+++E+            + +    
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYK---------ELKQDPYA  56

Query  78   DLIDDPEQYQGYGVFVVPVSARWKFLAENTKGKPAVGGEPAKNIGQLIDEAMDAVMKANP  137
            D  +D ++Y +  +F VP  ARW+++ +N+K KP        +IGQLID AM A+ K N 
Sbjct  57   D-EEDQDEYLAENIFWVPKEARWQYINDNAK-KP--------EIGQLIDKAMIAIEKENE  106

Query  138  TLGGTLPRLYNKDNIDQRRLGELIDLFNSARFSRQGEHRARDLMGEVYEYFLGNFARAEG  197
            +L G LP+ Y +  +D+ +LG++IDLF + +++ + E R +D++G VYEYF+++FA AEG
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLF-TFKLG-DTESRKQDVLGRVYEYFIAKFASAEG  164

Query  198  KRGGEFFTPPSVVKVIVEVLEPSSGRVYDPCCGSGGMFVQTEKFIYEHDGDPKDVSIYGQ  257
            K +GEF+TP+S+VK++VE++EP  GR+YDPCCGSGGMFVQ+E+F+  H+G   D++IYGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  258  ESIEETWRMAKMNLAIHGIDNKGLGARWSDTFARDQHPDVQMDYVMANPPFNIKDWARNE  317
            ES   TW++AKMNLAI+GIDN +LG R +DTF  D H +++ DY++ANPPFN  DW+++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  318  --EDPRWRFGVPPANNANYAWIQHILYKLAPGGRAGVVMAngsmssnsngegDIRAQIVE  375
              +D RW+FGVPP  NANYAWI+H++ KLAP G AG V+ANGSMS+++++E +IR +++E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  376  ADLVSCMVALPTQLFRSTGIPVCLWFFAKDKAAGKQGSIDRCGQVLFIDARELGDLVDRA  435
             DLV C+V+LP QLF ST IPVCLWF++++K  G++G  +R  ++LFIDARE+G++V R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRT  401

Query  436  ERALTNEEIVRIGDTFHAWRGSKSAAVKGIMYEDVPGFCKSATLAEIKATDYALTPGRYV  495
             + +++E+I ++++T+H+WRG++        YED++GFCK   L E+K  +Y LTPGRYV
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  496  GTPAVEDDGEPIDEKMARLSKALLEAFDESARLERVVREQLGRL  539
            G + VE+D EP+++KM R++  L E F  S  LE  +R  L  L
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

243) hsdM in NC_020559


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  434 bits (1635),  Expect = 6e-123, Method: Compositional matrix adjust.
 Identities = 255/524 (49%), Positives = 383/524 (74%), Gaps = 31/524 (5%)

Query  18   LKDTLWKAADKLRGSLSASQYKDVILGLVFLKYVSDAYDerreairaelaaeGMEESQIE  77
            + + LW+AADKLRGS+ A++YK+V LGL+FLKYVSD+++E+            + +    
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYK---------ELKQDPYA  56

Query  78   DLIDDPEQYQGYGVFVVPVSARWKFLAENTKGKPAVGGEPAKNIGQLIDEAMDAVMKANP  137
            D  +D ++Y +  +F VP  ARW+++ +N+K KP        +IGQLID AM A+ K N 
Sbjct  57   D-EEDQDEYLAENIFWVPKEARWQYINDNAK-KP--------EIGQLIDKAMIAIEKENE  106

Query  138  TLGGTLPRLYNKDNIDQRRLGELIDLFNSARFSRQGEHRARDLMGEVYEYFLGNFARAEG  197
            +L G LP+ Y +  +D+ +LG++IDLF + +++ + E R +D++G VYEYF+++FA AEG
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLF-TFKLG-DTESRKQDVLGRVYEYFIAKFASAEG  164

Query  198  KRGGEFFTPPSVVKVIVEVLEPSSGRVYDPCCGSGGMFVQTEKFIYEHDGDPKDVSIYGQ  257
            K +GEF+TP+S+VK++VE++EP  GR+YDPCCGSGGMFVQ+E+F+  H+G   D++IYGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  258  ESIEETWRMAKMNLAIHGIDNKGLGARWSDTFARDQHPDVQMDYVMANPPFNIKDWARNE  317
            ES   TW++AKMNLAI+GIDN +LG R +DTF  D H +++ DY++ANPPFN  DW+++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  318  --EDPRWRFGVPPANNANYAWIQHILYKLAPGGRAGVVMAngsmssnsngegDIRAQIVE  375
              +D RW+FGVPP  NANYAWI+H++ KLAP G AG V+ANGSMS+++++E +IR +++E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  376  ADLVSCMVALPTQLFRSTGIPVCLWFFAKDKAAGKQGSIDRCGQVLFIDARELGDLVDRA  435
             DLV C+V+LP QLF ST IPVCLWF++++K  G++G  +R  ++LFIDARE+G++V R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRT  401

Query  436  ERALTNEEIVRIGDTFHAWRGSKSAAVKGIMYEDVPGFCKSATLAEIKATDYALTPGRYV  495
             + +++E+I ++++T+H+WRG++        YED++GFCK   L E+K  +Y LTPGRYV
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  496  GTPAVEDDGEPIDEKMARLSKALLEAFDESARLERVVREQLGRL  539
            G + VE+D EP+++KM R++  L E F  S  LE  +R  L  L
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

244) TBHG_02688 in NC_022350


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  434 bits (1635),  Expect = 6e-123, Method: Compositional matrix adjust.
 Identities = 255/524 (49%), Positives = 383/524 (74%), Gaps = 31/524 (5%)

Query  18   LKDTLWKAADKLRGSLSASQYKDVILGLVFLKYVSDAYDerreairaelaaeGMEESQIE  77
            + + LW+AADKLRGS+ A++YK+V LGL+FLKYVSD+++E+            + +    
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYK---------ELKQDPYA  56

Query  78   DLIDDPEQYQGYGVFVVPVSARWKFLAENTKGKPAVGGEPAKNIGQLIDEAMDAVMKANP  137
            D  +D ++Y +  +F VP  ARW+++ +N+K KP        +IGQLID AM A+ K N 
Sbjct  57   D-EEDQDEYLAENIFWVPKEARWQYINDNAK-KP--------EIGQLIDKAMIAIEKENE  106

Query  138  TLGGTLPRLYNKDNIDQRRLGELIDLFNSARFSRQGEHRARDLMGEVYEYFLGNFARAEG  197
            +L G LP+ Y +  +D+ +LG++IDLF + +++ + E R +D++G VYEYF+++FA AEG
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLF-TFKLG-DTESRKQDVLGRVYEYFIAKFASAEG  164

Query  198  KRGGEFFTPPSVVKVIVEVLEPSSGRVYDPCCGSGGMFVQTEKFIYEHDGDPKDVSIYGQ  257
            K +GEF+TP+S+VK++VE++EP  GR+YDPCCGSGGMFVQ+E+F+  H+G   D++IYGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  258  ESIEETWRMAKMNLAIHGIDNKGLGARWSDTFARDQHPDVQMDYVMANPPFNIKDWARNE  317
            ES   TW++AKMNLAI+GIDN +LG R +DTF  D H +++ DY++ANPPFN  DW+++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  318  --EDPRWRFGVPPANNANYAWIQHILYKLAPGGRAGVVMAngsmssnsngegDIRAQIVE  375
              +D RW+FGVPP  NANYAWI+H++ KLAP G AG V+ANGSMS+++++E +IR +++E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  376  ADLVSCMVALPTQLFRSTGIPVCLWFFAKDKAAGKQGSIDRCGQVLFIDARELGDLVDRA  435
             DLV C+V+LP QLF ST IPVCLWF++++K  G++G  +R  ++LFIDARE+G++V R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRT  401

Query  436  ERALTNEEIVRIGDTFHAWRGSKSAAVKGIMYEDVPGFCKSATLAEIKATDYALTPGRYV  495
             + +++E+I ++++T+H+WRG++        YED++GFCK   L E+K  +Y LTPGRYV
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  496  GTPAVEDDGEPIDEKMARLSKALLEAFDESARLERVVREQLGRL  539
            G + VE+D EP+++KM R++  L E F  S  LE  +R  L  L
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

245) MRGA423_17110 in NC_017528


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  434 bits (1635),  Expect = 6e-123, Method: Compositional matrix adjust.
 Identities = 255/524 (49%), Positives = 383/524 (74%), Gaps = 31/524 (5%)

Query  18   LKDTLWKAADKLRGSLSASQYKDVILGLVFLKYVSDAYDerreairaelaaeGMEESQIE  77
            + + LW+AADKLRGS+ A++YK+V LGL+FLKYVSD+++E+            + +    
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYK---------ELKQDPYA  56

Query  78   DLIDDPEQYQGYGVFVVPVSARWKFLAENTKGKPAVGGEPAKNIGQLIDEAMDAVMKANP  137
            D  +D ++Y +  +F VP  ARW+++ +N+K KP        +IGQLID AM A+ K N 
Sbjct  57   D-EEDQDEYLAENIFWVPKEARWQYINDNAK-KP--------EIGQLIDKAMIAIEKENE  106

Query  138  TLGGTLPRLYNKDNIDQRRLGELIDLFNSARFSRQGEHRARDLMGEVYEYFLGNFARAEG  197
            +L G LP+ Y +  +D+ +LG++IDLF + +++ + E R +D++G VYEYF+++FA AEG
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLF-TFKLG-DTESRKQDVLGRVYEYFIAKFASAEG  164

Query  198  KRGGEFFTPPSVVKVIVEVLEPSSGRVYDPCCGSGGMFVQTEKFIYEHDGDPKDVSIYGQ  257
            K +GEF+TP+S+VK++VE++EP  GR+YDPCCGSGGMFVQ+E+F+  H+G   D++IYGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  258  ESIEETWRMAKMNLAIHGIDNKGLGARWSDTFARDQHPDVQMDYVMANPPFNIKDWARNE  317
            ES   TW++AKMNLAI+GIDN +LG R +DTF  D H +++ DY++ANPPFN  DW+++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  318  --EDPRWRFGVPPANNANYAWIQHILYKLAPGGRAGVVMAngsmssnsngegDIRAQIVE  375
              +D RW+FGVPP  NANYAWI+H++ KLAP G AG V+ANGSMS+++++E +IR +++E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  376  ADLVSCMVALPTQLFRSTGIPVCLWFFAKDKAAGKQGSIDRCGQVLFIDARELGDLVDRA  435
             DLV C+V+LP QLF ST IPVCLWF++++K  G++G  +R  ++LFIDARE+G++V R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRT  401

Query  436  ERALTNEEIVRIGDTFHAWRGSKSAAVKGIMYEDVPGFCKSATLAEIKATDYALTPGRYV  495
             + +++E+I ++++T+H+WRG++        YED++GFCK   L E+K  +Y LTPGRYV
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  496  GTPAVEDDGEPIDEKMARLSKALLEAFDESARLERVVREQLGRL  539
            G + VE+D EP+++KM R++  L E F  S  LE  +R  L  L
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

246) MT7199_2789 in NC_020089


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  434 bits (1635),  Expect = 6e-123, Method: Compositional matrix adjust.
 Identities = 255/524 (49%), Positives = 383/524 (74%), Gaps = 31/524 (5%)

Query  18   LKDTLWKAADKLRGSLSASQYKDVILGLVFLKYVSDAYDerreairaelaaeGMEESQIE  77
            + + LW+AADKLRGS+ A++YK+V LGL+FLKYVSD+++E+            + +    
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYK---------ELKQDPYA  56

Query  78   DLIDDPEQYQGYGVFVVPVSARWKFLAENTKGKPAVGGEPAKNIGQLIDEAMDAVMKANP  137
            D  +D ++Y +  +F VP  ARW+++ +N+K KP        +IGQLID AM A+ K N 
Sbjct  57   D-EEDQDEYLAENIFWVPKEARWQYINDNAK-KP--------EIGQLIDKAMIAIEKENE  106

Query  138  TLGGTLPRLYNKDNIDQRRLGELIDLFNSARFSRQGEHRARDLMGEVYEYFLGNFARAEG  197
            +L G LP+ Y +  +D+ +LG++IDLF + +++ + E R +D++G VYEYF+++FA AEG
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLF-TFKLG-DTESRKQDVLGRVYEYFIAKFASAEG  164

Query  198  KRGGEFFTPPSVVKVIVEVLEPSSGRVYDPCCGSGGMFVQTEKFIYEHDGDPKDVSIYGQ  257
            K +GEF+TP+S+VK++VE++EP  GR+YDPCCGSGGMFVQ+E+F+  H+G   D++IYGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  258  ESIEETWRMAKMNLAIHGIDNKGLGARWSDTFARDQHPDVQMDYVMANPPFNIKDWARNE  317
            ES   TW++AKMNLAI+GIDN +LG R +DTF  D H +++ DY++ANPPFN  DW+++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  318  --EDPRWRFGVPPANNANYAWIQHILYKLAPGGRAGVVMAngsmssnsngegDIRAQIVE  375
              +D RW+FGVPP  NANYAWI+H++ KLAP G AG V+ANGSMS+++++E +IR +++E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  376  ADLVSCMVALPTQLFRSTGIPVCLWFFAKDKAAGKQGSIDRCGQVLFIDARELGDLVDRA  435
             DLV C+V+LP QLF ST IPVCLWF++++K  G++G  +R  ++LFIDARE+G++V R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRT  401

Query  436  ERALTNEEIVRIGDTFHAWRGSKSAAVKGIMYEDVPGFCKSATLAEIKATDYALTPGRYV  495
             + +++E+I ++++T+H+WRG++        YED++GFCK   L E+K  +Y LTPGRYV
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  496  GTPAVEDDGEPIDEKMARLSKALLEAFDESARLERVVREQLGRL  539
            G + VE+D EP+++KM R++  L E F  S  LE  +R  L  L
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

247) hsdM in NC_015758


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  434 bits (1635),  Expect = 7e-123, Method: Compositional matrix adjust.
 Identities = 255/524 (49%), Positives = 382/524 (73%), Gaps = 31/524 (5%)

Query  18   LKDTLWKAADKLRGSLSASQYKDVILGLVFLKYVSDAYDerreairaelaaeGMEESQIE  77
            + + LW+AADKLRGS+ A++YK+V LGL+FLKYVSD+++E+            + +    
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYK---------ELKQDPYA  56

Query  78   DLIDDPEQYQGYGVFVVPVSARWKFLAENTKGKPAVGGEPAKNIGQLIDEAMDAVMKANP  137
            D  +D ++Y +  +F VP  ARW+++ +N+K KP        +IGQLID AM A+ K N 
Sbjct  57   D-EEDQDEYLAENIFWVPKEARWQYINDNAK-KP--------EIGQLIDKAMIAIEKENE  106

Query  138  TLGGTLPRLYNKDNIDQRRLGELIDLFNSARFSRQGEHRARDLMGEVYEYFLGNFARAEG  197
            +L G LP+ Y +  +D+ +LG++IDLF + +++ + E R +D++G VYEYF+++FA AEG
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLF-TFKLG-DTESRKQDVLGRVYEYFIAKFASAEG  164

Query  198  KRGGEFFTPPSVVKVIVEVLEPSSGRVYDPCCGSGGMFVQTEKFIYEHDGDPKDVSIYGQ  257
            K +GEF+TP+S+VK++VE++EP  GR+YDPCCGSGGMFVQ+E+F+  H+G   D++IYGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  258  ESIEETWRMAKMNLAIHGIDNKGLGARWSDTFARDQHPDVQMDYVMANPPFNIKDWARNE  317
            ES   TW++AKMNLAI+GIDN +LG R +DTF  D H +++ DY++ANPPFN  DW+++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  318  --EDPRWRFGVPPANNANYAWIQHILYKLAPGGRAGVVMAngsmssnsngegDIRAQIVE  375
              +D RW+FGVPP  NANYAWI+H++ KLAP G AG V+ANGSMS+++++E +IR +++E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  376  ADLVSCMVALPTQLFRSTGIPVCLWFFAKDKAAGKQGSIDRCGQVLFIDARELGDLVDRA  435
             DLV C+V+LP QLF ST IPVCLWF++++K  G++G  +R  ++LFIDARE+G++V R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRT  401

Query  436  ERALTNEEIVRIGDTFHAWRGSNSAAVKGIMYEDVPGFCKSATLAAIKATDYALTPGRYV  495
             + +++E+I ++++T+H+WRG+N        YED++GFCK   L  +K  +Y LTPGRYV
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  496  GTPAVEDDGEPIDEKMARLSKALLEAFDESARLERVVREQLGRL  539
            G + VE+D EP+++KM R++  L E F  S  LE  +R  L  L
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

248) hsdM in NC_017390


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  434 bits (1635),  Expect = 7e-123, Method: Compositional matrix adjust.
 Identities = 265/557 (48%), Positives = 392/557 (71%), Gaps = 64/557 (11%)

Query  12   LDSKFWKAADKLRANMDAANYKHVVLGLIFLKYVSDAFEARQQELTKLFRQVGNADNTYA  71
            ++ K+W+AADKLR++MDAA+YK+V LGLIFLKYVSD+FE + +EL               
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELK--------------  51

Query  72   IPREEYDSEAEYQQAIDQELEVEDYYAEKNVFWVPKAARWETLKSQAALPVGSVLGRDEN  131
                        Q++  +E + ++Y AE N+FWVPK ARW+ ++ +A  P          
Sbjct  52   ------------QDPYADEEDQDEYLAE-NIFWVPKEARWQYINDNAKKP----------  88

Query  132  GKELKLRSVSLLIDNALDKIEQSNGKLKGVLNR-IAHYQLGNEVLIGLINTFSDANFSNP  190
                    ++ LID+A+  IE+ N  LKGVL +  A+  L++E L ++I+ F+       
Sbjct  89   -------EIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEKLGDIIDLFT-------  134

Query  191  QYNGEQLKLSSKDILGHVYEYFLGQFALAEGKQGGQYYTPKSIVTLIVEMLQPYQGRVYD  250
             ++  +     +D+LG+VYEYF+++FA AEGK++G++YTP SIV L+VEM++PY+GR+YD
Sbjct  135  -FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYD  193

Query  251  PAMGSGGFFVSSDRFIEQHADAQRYNAAEQKQKIVVYGQESNPTTWRLAAMNMAIRGIDF  310
            P  GSGG FV S+RF+E+H +        + + I +YGQESNPTTW+LA MN+AIRGID 
Sbjct  194  PCCGSGGMFVQSERFVEKHQG--------RLDDIAIYGQESNPTTWKLAKMNLAIRGIDN  245

Query  311  DFGTKNADTLLDDQHPDLRADFVMANPPFNMKEWWSAKLENDVRWQYGTPPQGNANFAWM  370
            D+G +NADT+ +D H +L+AD+++ANPPFN  +W   +L +D RWQ+G PP+GNAN+AW+
Sbjct  246  DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWI  305

Query  371  QHMIHHLAPQGSMALLLANGSMSSNTNNEGEIRRKLVEADLVECMVALPGQLFTNTQIPA  430
            +HMI  LAP+G+ +++LANGSMS++ ++E EIR++L+E DLVEC+V+LPGQLF +TQIP 
Sbjct  306  EHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPV  365

Query  431  CIWLLTKNKSGGNGKAHRKGEVLFIDARQTGFMKDRVLRDFTTEDIAKIAATFHAWQTDK  490
            C+W++++NK G NGK +RK E+LFIDAR+ G M  R L++F+ EDI K+A T+H+W+  +
Sbjct  366  CLWFISNNK-GQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGTN  424

Query  491  D--YQDQAGFCFAASLADIQKNDFVLTPGRYVGAAEQEEDAEPFAEKMTRLTQQLKVQLA  548
            D  Y+D AGFC   +L ++++N+++LTPGRYVG A+ EED EPF +KM R+T +L  Q+A
Sbjct  425  DKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFA  484

Query  549  ESAELEKQIKANRGGVG  565
             S ELE QI+ +  G+G
Sbjct  485  KSKELEDQIRKSLEGLG  501

249) J113_19130 in NC_021193


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  434 bits (1633),  Expect = 8e-123, Method: Compositional matrix adjust.
 Identities = 255/524 (49%), Positives = 383/524 (74%), Gaps = 31/524 (5%)

Query  18   LKDTLWKAADKLRGSLSASQYKDVILGLVFLKYVSDAYDerreairaelaaeGMEESQIE  77
            + + LW+AADKLRGS+ A++YK+V LGL+FLKYVSD+++E+            + +    
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYK---------ELKQDPYA  56

Query  78   DLIDDPEQYQGYGVFVVPVSARWKFLAENTKGKPAVGGEPAKNIGQLIDEAMDAVMKANP  137
            D  +D ++Y +  +F VP  ARW+++ +N+K KP        +IGQLID AM A+ K N 
Sbjct  57   D-EEDQDEYLAENIFWVPKEARWQYINDNAK-KP--------EIGQLIDKAMIAIEKENE  106

Query  138  TLGGTLPRLYNKDNIDQRRLGELIDLFNSARFSRQDEHRARDLMGEVYEYFLGNFARAEG  197
            +L G LP+ Y +  +D+ +LG++IDLF + +++ + E R +D++G VYEYF+++FA AEG
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLF-TFKLG-DTESRKQDVLGRVYEYFIAKFASAEG  164

Query  198  KRGGEFFTPPSVVKVIVEVLEPSSGRVYDPCCGSGGMFVQTEKFIYEHDGDPKDVSIYGQ  257
            K +GEF+TP+S+VK++VE++EP  GR+YDPCCGSGGMFVQ+E+F+  H+G   D++IYGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  258  ESIEETWRMAKMNLAIHGIDNKGLGARWSDTFARDQHPDVQMDYVMANPPFNIKDWARNE  317
            ES   TW++AKMNLAI+GIDN +LG R +DTF  D H +++ DY++ANPPFN  DW+++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  318  --EDPRWRFGVPPANNANYAWIQHILYKLAPGGRAGVVMAngsmssnsngegDIRAQIVE  375
              +D RW+FGVPP  NANYAWI+H++ KLAP G AG V+ANGSMS+++++E +IR +++E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  376  ADLVSCMVALPTQLFRSTGIPVCLWFFAKDKAAGKQGSIDRCGQVLFIDARELGDLVDRA  435
             DLV C+V+LP QLF ST IPVCLWF++++K  G++G  +R  ++LFIDARE+G++V R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRT  401

Query  436  ERALTNEEIVRIGDTFHAWRGSKSAAVKGIMYEDVPGFCKSATLAEIKATDYALTPGRYV  495
             + +++E+I ++++T+H+WRG++        YED++GFCK   L E+K  +Y LTPGRYV
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  496  GTPAVEDDGEPIDEKMARLSKALLEAFDESARLERVVREQLGRL  539
            G + VE+D EP+++KM R++  L E F  S  LE  +R  L  L
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

250) PT7_2210 in NC_015458


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  433 bits (1632),  Expect = 1e-122, Method: Compositional matrix adjust.
 Identities = 271/517 (53%), Positives = 380/517 (74%), Gaps = 29/517 (5%)

Query  8    TLWAAADKLRANMDAAEYKHLVLGLIFVKYISDSFAAHRAALTKRFADQGDDYVLPDADE  67
             LW AADKLR++MDAAEYK++ LGLIF+KY+SDSF      L +      D Y       
Sbjct  9    KLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQ------DPY-------  55

Query  68   ALIASELEERDYYTAANIFWVPeaarwealraaaKQPDIGKRIDDALTAIEAENPKLKGI  127
                ++ E++D Y A NIFWVP  ARW+ +   AK+P+IG+ ID A+ AIE EN  LKG+
Sbjct  56   ----ADEEDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGV  111

Query  128  LDKRYGRAQLPDGKLGELVDMISTIGFGGDANTARDILGQVYEYFLGQFASAEGKKGGQF  187
            L K Y+R+ L   KLG+++D++ T+ +G+  +  +D+LG+VYEYF+++FASAEGK++G+F
Sbjct  112  LPKEYARPALDKEKLGDIIDLF-TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEF  170

Query  188  YTPASIVNTLVAVLAPHKGQVYDPCCGSGGMFVQSEKFIEAHGGNIGDVSIYGQESNPTT  247
            YTP+SIV+ LV ++ P KG++YDPCCGSGGMFVQSE+F+E H G ++D++IYGQESNPTT
Sbjct  171  YTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTT  230

Query  248  WRLAAMNLAIRGIDFNLGKEPADTFTRNQHPDLRADFILANPPFNISDWWHGSLEGDPRW  307
            W+LA MNLAIRGID +LG   ADTF  + H +L+AD+ILANPPFN SDW +  L +D RW
Sbjct  231  WKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRW  290

Query  308  QYGDPPKGNANYAWLQHMLHHLKPTGRAGIVLANGSMSSSQNNEGVIRaamvdadvvevm  367
            Q+G PPKGNANYAW++HM+  L P G AG+VLANGSMS+S ++E  IR  +++ D+VE +
Sbjct  291  QFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECI  350

Query  368  iaLPGQLFFNTQIPACLWFLAKQ------KKRKGEVLFIDARKMGRMISRVQAELDDAAI  421
            ++LPGQLF++TQIP CLWF++++      K RK E+LFIDAR +G+M+SR   E+ D  I
Sbjct  351  VTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDI  410

Query  422  TRIAETVAAWRGEVEDGATITEYQDVPGFCRSVPLAEIAQHGHVLTTGRYVGaeeveddd  481
             ++A+T  +WRG  +       Y+D++GFC+ V L E+ ++  +LT GRYVG  +VE+D+
Sbjct  411  QKVAQTYHSWRGTND-----KYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDE  465

Query  482  eafaeKMQKLTEKLGEQMAKGAELDAVIRQKLGGLGY  518
            E+F +KM+++T  L+EQ AK+ EL+  IR+ L GLGY
Sbjct  466  EPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGY  502

251) hsdM in NC_019965


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  433 bits (1631),  Expect = 1e-122, Method: Compositional matrix adjust.
 Identities = 255/524 (49%), Positives = 385/524 (74%), Gaps = 31/524 (5%)

Query  18   LKDTLWKAADKLRGSLSASQYKDVILGLVFLKYVSDAYDerreairaelaaDGMEESQIE  77
            + + LW+AADKLRGS+ A++YK+V LGL+FLKYVSD+++E+          +  +++  +
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYK--------ELKQDPYAD  57

Query  78   DLIDDPEEYQGYGVFVVPVSTRWKFLAENTKGKPAVSGEPAKNIGQLIDEAMDAVMKANP  137
            +  +D +EY +  +F VP  +RW+++ +N+K KP        +IGQLID AM A+ K N 
Sbjct  58   E--EDQDEYLAENIFWVPKEARWQYINDNAK-KP--------EIGQLIDKAMIAIEKENE  106

Query  138  TLGGTLPLLYNKDNIDQRRLGELIDLFNSARFSRQGEHRARDLMGEVYEYFLGNFARAEG  197
            +L G LP  Y +  +D+ +LG++IDLF + +++ + E R +D++G VYEYF+++FA AEG
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLF-TFKLG-DTESRKQDVLGRVYEYFIAKFASAEG  164

Query  198  KRGGEFFTPPSVVKVIVEVLEPSSGRVYDPCCGSGGMFVQTEKFIYEHDGDPKDVSIYGQ  257
            K +GEF+TP+S+VK++VE++EP  GR+YDPCCGSGGMFVQ+E+F+  H+G   D++IYGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  258  ESIEETWRMAKMNLAIHGIDNKGLGARWGDTFARDQHPDMQMDYVMANPPFNIKDWARNE  317
            ES   TW++AKMNLAI+GIDN +LG R +DTF  D H +++ DY++ANPPFN  DW+++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  318  --EDPRWRFGVPPANNANYAWIQHILYKLAPGGRAGVVMAngsmssnsngegDIRAQIVE  375
              +D RW+FGVPP  NANYAWI+H++ KLAP G AG V+ANGSMS+++++E +IR +++E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  376  ADLVSCMVALPTQLFRSTGIPVCLWFFAKDKAAGKQGSIDRCGQVLFIDARELGDLVDRA  435
             DLV C+V+LP QLF ST IPVCLWF++++K  G++G  +R  ++LFIDARE+G++V R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRT  401

Query  436  ERALTNEEIVRIGDTFHAWRGSKSAAVKGIMYEDVPGFCKSATLAEIKATDYALTPGRYV  495
             + +++E+I ++++T+H+WRG++        YED++GFCK   L E+K  +Y LTPGRYV
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  496  GTPAVEDDGEPIDEKMARLTKALLEAFDESARLERVVREQLGRL  539
            G + VE+D EP+++KM R+T  L E F  S  LE  +R  L  L
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

252) hsdM in NC_019952


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  432 bits (1627),  Expect = 3e-122, Method: Compositional matrix adjust.
 Identities = 255/524 (49%), Positives = 381/524 (73%), Gaps = 31/524 (5%)

Query  18   LKDTLWKAADKLRGSLSASQYKDVILGLVFLKYVSDAYNerreairaelaaDGMDESQIE  77
            + + LW+AADKLRGS+ A++YK+V LGL+FLKYVSD+++E+            + +    
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKY---------KELKQDPYA  56

Query  78   DLIDDPGEYQGYGVFVVPPSARWKFLAENAKGKPAVGGESAKNIGQLIDEAMDAVMKANP  137
            D  +D +EY +  +F VP  ARW+++ +NAK KP        +IGQLID AM A+ K N 
Sbjct  57   D-EEDQDEYLAENIFWVPKEARWQYINDNAK-KP--------EIGQLIDKAMIAIEKENE  106

Query  138  TLGGTLPRLYNKDNIDQRRLGELIDLFNSARFSRQGAHRARDLMGEVYEYFLGNFARAEG  197
            +L G LP+ Y +  +D+ +LG++IDLF + +++ +   R +D++G VYEYF+++FA AEG
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLF-TFKLG-DTESRKQDVLGRVYEYFIAKFASAEG  164

Query  198  KRGGEFFTPPSVVKVIVEVLEPSSGRVYDPCCGSGGMFVQTEKFIYEHDGDPKNVVIYGQ  257
            K +GEF+TP+S+VK++VE++EP  GR+YDPCCGSGGMFVQ+E+F+  H+G   ++ IYGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  258  ESIEETWRMAKMNLAIHGIDNKGLGARWGDTFARDQHPDVRMDYVMANPPFNIKDWARNE  317
            ES   TW++AKMNLAI+GIDN +LG R +DTF  D H +++ DY++ANPPFN  DW+++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  318  --EDPRWRFGVPPANNANYAWIQHILYKLAPGGRAGVVMAngsmssnsngegDIRAQIVE  375
              +D RW+FGVPP  NANYAWI+H++ KLAP G AG V+ANGSMS+++++E +IR +++E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  376  ADVVSCMVALPTQLFRSTGIPVCLWFFAKDKAAGKQGSIDRCGQVLFIDGRELGYMVDRA  435
             D+V C+V+LP QLF ST IPVCLWF++++K  G++G  +R  ++LFID+RE+G MV R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRT  401

Query  436  ERALTNEEIVRIGDTFHAWRGSKSAAAKGITYEDVPGFCKSATLAEIKAADYALTPGRYV  495
             + +++E+I ++++T+H+WRG++        YED++GFCK   L E+K  +Y LTPGRYV
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  496  GAPEVEDDGEPIDQKIARLTKELLAAFDESARLERVVREQLGRL  539
            G ++VE+D EP++QK+ R+T EL   F  S  LE  +R  L  L
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

253) Plabr_4421 in NC_015174


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  432 bits (1627),  Expect = 3e-122, Method: Compositional matrix adjust.
 Identities = 264/551 (48%), Positives = 383/551 (70%), Gaps = 51/551 (9%)

Query  7    SDLSYADTLWKAADALRGQVDAAEYKHVVLGLLFLKYISDSFQSRRDELEAELTSDGIKG  66
            + +++ + LW+AAD LRG +DAAEYK+V LGL+FLKY+SDSF+ +  EL  +  +D    
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADE---  58

Query  67   EQLENLLESRDEYTAERVFWVPPESRWTNLQDQATRPDIATLIDDAILAVERDNPNLKSK  126
                   E +DEY AE +FWVP E+RW  ++D+A +P+I+ LID A++A+E++N +LK+ 
Sbjct  59   -------EDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGV  111

Query  127  LPRDYARRGIEPVKLKGLIDLIADIGFNGTREKARDTLGRVYEYFLGKFAAAEGKLGGEF  186
            LP++YAR +++  KL ++IDL++ + + +T  + +D LGRVYEYF++KFA+AEGK +GEF
Sbjct  112  LPKEYARPALDKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEF  170

Query  187  YTPRSIVRVLVEMLEPYQGRIYDPACGSGGMFVQSEKFVEAHGGNRTDVSVFGQESNPTT  246
            YTP SIV++LVEM+EPY+GRIYDP CGSGGMFVQSE+FVE H G   D++++GQESNPTT
Sbjct  171  YTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTT  230

Query  247  WRLAHMNLAIHGIEANLGPQPADTFLKPQHPGLQADFVLANPPFNVSDYSGQLLRGDKRF  306
            W+LA MNLAI+GI+ +LG + ADTF +  H GL+AD++LANPPFN SD + + L +D R 
Sbjct  231  WKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRW  290

Query  307  SFGDPPVGNANYAWIQHFIHHLAFPNGQGGGVAGFVMANGSLSSNTGGEGDIRRKIVEAD  366
             FG PP GNANYAWI+H I  LA       G AGFV+ANGS+S++  +E +IR++++E D
Sbjct  291  QFGVPPKGNANYAWIEHMISKLA-----PNGTAGFVLANGSMSTSGKDELEIRKNLIEQD  345

Query  367  LVDCIVAMPAQLFFTTGIPVCLWFLTRDKTGKNIRKGTPNRPEGRQGETLFIDARKLGSM  426
            LV+CIV++P+QLF++T IPVCLWF++ +K G+N +K        R+ E LFIDAR +G M
Sbjct  346  LVECIVTLPGQLFYSTQIPVCLWFISNNK-GQNGKK-------ERKNEILFIDAREIGHM  397

Query  427  QTRTLRVLSGLEEAEYVPGTSDPLPTSDIGRIVYAYRLWRGEPQPDWWNKKEYGEWTFMP  486
             +RTL+                 ++  DI ++  +Y+ WRG       N K Y +     
Sbjct  398  VSRTLK----------------EFSDEDIQKVAQTYHSWRGT------NDKYYED-----  430

Query  487  TPGFASPATIEQIAKHGYALTPGRYVGAEVIEEDDEPFAEKYPRLVAeveeslregerls  546
             +GF     +E++ ++ Y LTPGRYVG   +EED+EPF +K  R+ +E+ E +  +  L 
Sbjct  431  IAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELE  490

Query  547  svIRQTLRGVG  557
              IR++L G+G
Sbjct  491  DQIRKSLEGLG  501

254) hsdM in NC_017524


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  431 bits (1623),  Expect = 6e-122, Method: Compositional matrix adjust.
 Identities = 254/524 (49%), Positives = 382/524 (73%), Gaps = 31/524 (5%)

Query  18   LKDTLWKAADKLRGSLSASQYKDVILGLVFLKYVSDAYDerreairaelaaeGMEESQIE  77
            + + LW+AADKLRGS+ A++YK+V LGL+FLKYVSD+++E+            + +    
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYK---------ELKQDPYA  56

Query  78   DLIDDPEQYQGYGVFVVPVSARWKFLAENTKGKPAVGGEPAKNIGQLIDEAMDAVMKANP  137
            D  +D ++Y +  +F VP  ARW+++ +N+K KP        +IGQLID AM A+ K N 
Sbjct  57   D-EEDQDEYLAENIFWVPKEARWQYINDNAK-KP--------EIGQLIDKAMIAIEKENE  106

Query  138  TLGGTLPRLYNKDNIDQRRLGELIDLFNSARFSRQGEHRARDLMGEVYEYFLGNFARAEG  197
            +L G LP+ Y +  +D+ +LG++IDLF + +++ + E R +D++G VYEYF+++FA AEG
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLF-TFKLG-DTESRKQDVLGRVYEYFIAKFASAEG  164

Query  198  KRGGEFFTPPSVVKVIVEVLEPSSGRVYDPCCGSGGMFVQTEKFIYEHDGDPKDVSIYGQ  257
            K +GEF+TP+S+VK++VE++EP  GR+YDPCCGSGGMFVQ+E+F+  H+G   D++IYGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  258  ESIEETWRMAKMNLAIHGIDNKGLGARWSDTFARDQHPDVQMDYVMANLPFNIKDWARNE  317
            ES   TW++AKMNLAI+GIDN +LG R +DTF  D H +++ DY++AN PFN  DW+++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  318  --EDPRWRFGVPPANNANYAWIQHILYKLAPGGRAGVVMAngsmssnsngegDIRAQIVE  375
              +D RW+FGVPP  NANYAWI+H++ KLAP G AG V+ANGSMS+++++E +IR +++E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  376  ADLVSCMVALPTQLFRSTGIPVCLWFFAKDKAAGKQGSIDRCGQVLFIDARELGDLVDRA  435
             DLV C+V+LP QLF ST IPVCLWF++++K  G++G  +R  ++LFIDARE+G++V R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRT  401

Query  436  ERALTNEEIVRIGDTFHAWRGSKSAAVKGIMYEDVPGFCKSATLAEIKATDYALTPGRYV  495
             + +++E+I ++++T+H+WRG++        YED++GFCK   L E+K  +Y LTPGRYV
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  496  GTPAVEDDGEPIDEKMARLSKALLEAFDESARLERVVREQLGRL  539
            G + VE+D EP+++KM R++  L E F  S  LE  +R  L  L
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

255) TBFG_12769 in NC_009565


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  431 bits (1623),  Expect = 6e-122, Method: Compositional matrix adjust.
 Identities = 254/524 (49%), Positives = 382/524 (73%), Gaps = 31/524 (5%)

Query  18   LKDTLWKAADKLRGSLSASQYKDVILGLVFLKYVSDAYDerreairaelaaeGMEESQIE  77
            + + LW+AADKLRGS+ A++YK+V LGL+FLKYVSD+++E+            + +    
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYK---------ELKQDPYA  56

Query  78   DLIDDPEQYQGYGVFVVPVSARWKFLAENTKGKPAVGGEPAKNIGQLIDEAMDAVMKANP  137
            D  +D ++Y +  +F VP  ARW+++ +N+K KP        +IGQLID AM A+ K N 
Sbjct  57   D-EEDQDEYLAENIFWVPKEARWQYINDNAK-KP--------EIGQLIDKAMIAIEKENE  106

Query  138  TLGGTLPRLYNKDNIDQRRLGELIDLFNSARFSRQGEHRARDLMGEVYEYFLGNFARAEG  197
            +L G LP+ Y +  +D+ +LG++IDLF + +++ + E R +D++G VYEYF+++FA AEG
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLF-TFKLG-DTESRKQDVLGRVYEYFIAKFASAEG  164

Query  198  KRGGEFFTPPSVVKVIVEVLEPSSGRVYDPCCGSGGMFVQTEKFIYEHDGDPKDVSIYGQ  257
            K +GEF+TP+S+VK++VE++EP  GR+YDPCCGSGGMFVQ+E+F+  H+G   D++IYGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  258  ESIEETWRMAKMNLAIHGIDNKGLGARWSDTFARDQHPDVQMDYVMANLPFNIKDWARNE  317
            ES   TW++AKMNLAI+GIDN +LG R +DTF  D H +++ DY++AN PFN  DW+++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  318  --EDPRWRFGVPPANNANYAWIQHILYKLAPGGRAGVVMAngsmssnsngegDIRAQIVE  375
              +D RW+FGVPP  NANYAWI+H++ KLAP G AG V+ANGSMS+++++E +IR +++E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  376  ADLVSCMVALPTQLFRSTGIPVCLWFFAKDKAAGKQGSIDRCGQVLFIDARELGDLVDRA  435
             DLV C+V+LP QLF ST IPVCLWF++++K  G++G  +R  ++LFIDARE+G++V R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRT  401

Query  436  ERALTNEEIVRIGDTFHAWRGSKSAAVKGIMYEDVPGFCKSATLAEIKATDYALTPGRYV  495
             + +++E+I ++++T+H+WRG++        YED++GFCK   L E+K  +Y LTPGRYV
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  496  GTPAVEDDGEPIDEKMARLSKALLEAFDESARLERVVREQLGRL  539
            G + VE+D EP+++KM R++  L E F  S  LE  +R  L  L
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

256) hsdM in NC_009525


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  431 bits (1623),  Expect = 6e-122, Method: Compositional matrix adjust.
 Identities = 254/524 (49%), Positives = 382/524 (73%), Gaps = 31/524 (5%)

Query  18   LKDTLWKAADKLRGSLSASQYKDVILGLVFLKYVSDAYDerreairaelaaeGMEESQIE  77
            + + LW+AADKLRGS+ A++YK+V LGL+FLKYVSD+++E+            + +    
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYK---------ELKQDPYA  56

Query  78   DLIDDPEQYQGYGVFVVPVSARWKFLAENTKGKPAVGGEPAKNIGQLIDEAMDAVMKANP  137
            D  +D ++Y +  +F VP  ARW+++ +N+K KP        +IGQLID AM A+ K N 
Sbjct  57   D-EEDQDEYLAENIFWVPKEARWQYINDNAK-KP--------EIGQLIDKAMIAIEKENE  106

Query  138  TLGGTLPRLYNKDNIDQRRLGELIDLFNSARFSRQGEHRARDLMGEVYEYFLGNFARAEG  197
            +L G LP+ Y +  +D+ +LG++IDLF + +++ + E R +D++G VYEYF+++FA AEG
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLF-TFKLG-DTESRKQDVLGRVYEYFIAKFASAEG  164

Query  198  KRGGEFFTPPSVVKVIVEVLEPSSGRVYDPCCGSGGMFVQTEKFIYEHDGDPKDVSIYGQ  257
            K +GEF+TP+S+VK++VE++EP  GR+YDPCCGSGGMFVQ+E+F+  H+G   D++IYGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  258  ESIEETWRMAKMNLAIHGIDNKGLGARWSDTFARDQHPDVQMDYVMANLPFNIKDWARNE  317
            ES   TW++AKMNLAI+GIDN +LG R +DTF  D H +++ DY++AN PFN  DW+++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  318  --EDPRWRFGVPPANNANYAWIQHILYKLAPGGRAGVVMAngsmssnsngegDIRAQIVE  375
              +D RW+FGVPP  NANYAWI+H++ KLAP G AG V+ANGSMS+++++E +IR +++E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  376  ADLVSCMVALPTQLFRSTGIPVCLWFFAKDKAAGKQGSIDRCGQVLFIDARELGDLVDRA  435
             DLV C+V+LP QLF ST IPVCLWF++++K  G++G  +R  ++LFIDARE+G++V R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRT  401

Query  436  ERALTNEEIVRIGDTFHAWRGSKSAAVKGIMYEDVPGFCKSATLAEIKATDYALTPGRYV  495
             + +++E+I ++++T+H+WRG++        YED++GFCK   L E+K  +Y LTPGRYV
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  496  GTPAVEDDGEPIDEKMARLSKALLEAFDESARLERVVREQLGRL  539
            G + VE+D EP+++KM R++  L E F  S  LE  +R  L  L
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

257) RVBD_2756c in NC_018143


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  431 bits (1623),  Expect = 6e-122, Method: Compositional matrix adjust.
 Identities = 254/524 (49%), Positives = 382/524 (73%), Gaps = 31/524 (5%)

Query  18   LKDTLWKAADKLRGSLSASQYKDVILGLVFLKYVSDAYDerreairaelaaeGMEESQIE  77
            + + LW+AADKLRGS+ A++YK+V LGL+FLKYVSD+++E+            + +    
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYK---------ELKQDPYA  56

Query  78   DLIDDPEQYQGYGVFVVPVSARWKFLAENTKGKPAVGGEPAKNIGQLIDEAMDAVMKANP  137
            D  +D ++Y +  +F VP  ARW+++ +N+K KP        +IGQLID AM A+ K N 
Sbjct  57   D-EEDQDEYLAENIFWVPKEARWQYINDNAK-KP--------EIGQLIDKAMIAIEKENE  106

Query  138  TLGGTLPRLYNKDNIDQRRLGELIDLFNSARFSRQGEHRARDLMGEVYEYFLGNFARAEG  197
            +L G LP+ Y +  +D+ +LG++IDLF + +++ + E R +D++G VYEYF+++FA AEG
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLF-TFKLG-DTESRKQDVLGRVYEYFIAKFASAEG  164

Query  198  KRGGEFFTPPSVVKVIVEVLEPSSGRVYDPCCGSGGMFVQTEKFIYEHDGDPKDVSIYGQ  257
            K +GEF+TP+S+VK++VE++EP  GR+YDPCCGSGGMFVQ+E+F+  H+G   D++IYGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  258  ESIEETWRMAKMNLAIHGIDNKGLGARWSDTFARDQHPDVQMDYVMANLPFNIKDWARNE  317
            ES   TW++AKMNLAI+GIDN +LG R +DTF  D H +++ DY++AN PFN  DW+++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  318  --EDPRWRFGVPPANNANYAWIQHILYKLAPGGRAGVVMAngsmssnsngegDIRAQIVE  375
              +D RW+FGVPP  NANYAWI+H++ KLAP G AG V+ANGSMS+++++E +IR +++E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  376  ADLVSCMVALPTQLFRSTGIPVCLWFFAKDKAAGKQGSIDRCGQVLFIDARELGDLVDRA  435
             DLV C+V+LP QLF ST IPVCLWF++++K  G++G  +R  ++LFIDARE+G++V R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRT  401

Query  436  ERALTNEEIVRIGDTFHAWRGSKSAAVKGIMYEDVPGFCKSATLAEIKATDYALTPGRYV  495
             + +++E+I ++++T+H+WRG++        YED++GFCK   L E+K  +Y LTPGRYV
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  496  GTPAVEDDGEPIDEKMARLSKALLEAFDESARLERVVREQLGRL  539
            G + VE+D EP+++KM R++  L E F  S  LE  +R  L  L
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

258) hsdM in NC_000962


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  431 bits (1623),  Expect = 6e-122, Method: Compositional matrix adjust.
 Identities = 254/524 (49%), Positives = 382/524 (73%), Gaps = 31/524 (5%)

Query  18   LKDTLWKAADKLRGSLSASQYKDVILGLVFLKYVSDAYDerreairaelaaeGMEESQIE  77
            + + LW+AADKLRGS+ A++YK+V LGL+FLKYVSD+++E+            + +    
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYK---------ELKQDPYA  56

Query  78   DLIDDPEQYQGYGVFVVPVSARWKFLAENTKGKPAVGGEPAKNIGQLIDEAMDAVMKANP  137
            D  +D ++Y +  +F VP  ARW+++ +N+K KP        +IGQLID AM A+ K N 
Sbjct  57   D-EEDQDEYLAENIFWVPKEARWQYINDNAK-KP--------EIGQLIDKAMIAIEKENE  106

Query  138  TLGGTLPRLYNKDNIDQRRLGELIDLFNSARFSRQGEHRARDLMGEVYEYFLGNFARAEG  197
            +L G LP+ Y +  +D+ +LG++IDLF + +++ + E R +D++G VYEYF+++FA AEG
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLF-TFKLG-DTESRKQDVLGRVYEYFIAKFASAEG  164

Query  198  KRGGEFFTPPSVVKVIVEVLEPSSGRVYDPCCGSGGMFVQTEKFIYEHDGDPKDVSIYGQ  257
            K +GEF+TP+S+VK++VE++EP  GR+YDPCCGSGGMFVQ+E+F+  H+G   D++IYGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  258  ESIEETWRMAKMNLAIHGIDNKGLGARWSDTFARDQHPDVQMDYVMANLPFNIKDWARNE  317
            ES   TW++AKMNLAI+GIDN +LG R +DTF  D H +++ DY++AN PFN  DW+++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  318  --EDPRWRFGVPPANNANYAWIQHILYKLAPGGRAGVVMAngsmssnsngegDIRAQIVE  375
              +D RW+FGVPP  NANYAWI+H++ KLAP G AG V+ANGSMS+++++E +IR +++E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  376  ADLVSCMVALPTQLFRSTGIPVCLWFFAKDKAAGKQGSIDRCGQVLFIDARELGDLVDRA  435
             DLV C+V+LP QLF ST IPVCLWF++++K  G++G  +R  ++LFIDARE+G++V R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRT  401

Query  436  ERALTNEEIVRIGDTFHAWRGSKSAAVKGIMYEDVPGFCKSATLAEIKATDYALTPGRYV  495
             + +++E+I ++++T+H+WRG++        YED++GFCK   L E+K  +Y LTPGRYV
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  496  GTPAVEDDGEPIDEKMARLSKALLEAFDESARLERVVREQLGRL  539
            G + VE+D EP+++KM R++  L E F  S  LE  +R  L  L
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

259) TBMG_01219 in NC_012943


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  431 bits (1623),  Expect = 6e-122, Method: Compositional matrix adjust.
 Identities = 254/524 (49%), Positives = 382/524 (73%), Gaps = 31/524 (5%)

Query  18   LKDTLWKAADKLRGSLSASQYKDVILGLVFLKYVSDAYDerreairaelaaeGMEESQIE  77
            + + LW+AADKLRGS+ A++YK+V LGL+FLKYVSD+++E+            + +    
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYK---------ELKQDPYA  56

Query  78   DLIDDPEQYQGYGVFVVPVSARWKFLAENTKGKPAVGGEPAKNIGQLIDEAMDAVMKANP  137
            D  +D ++Y +  +F VP  ARW+++ +N+K KP        +IGQLID AM A+ K N 
Sbjct  57   D-EEDQDEYLAENIFWVPKEARWQYINDNAK-KP--------EIGQLIDKAMIAIEKENE  106

Query  138  TLGGTLPRLYNKDNIDQRRLGELIDLFNSARFSRQGEHRARDLMGEVYEYFLGNFARAEG  197
            +L G LP+ Y +  +D+ +LG++IDLF + +++ + E R +D++G VYEYF+++FA AEG
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLF-TFKLG-DTESRKQDVLGRVYEYFIAKFASAEG  164

Query  198  KRGGEFFTPPSVVKVIVEVLEPSSGRVYDPCCGSGGMFVQTEKFIYEHDGDPKDVSIYGQ  257
            K +GEF+TP+S+VK++VE++EP  GR+YDPCCGSGGMFVQ+E+F+  H+G   D++IYGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  258  ESIEETWRMAKMNLAIHGIDNKGLGARWSDTFARDQHPDVQMDYVMANLPFNIKDWARNE  317
            ES   TW++AKMNLAI+GIDN +LG R +DTF  D H +++ DY++AN PFN  DW+++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  318  --EDPRWRFGVPPANNANYAWIQHILYKLAPGGRAGVVMAngsmssnsngegDIRAQIVE  375
              +D RW+FGVPP  NANYAWI+H++ KLAP G AG V+ANGSMS+++++E +IR +++E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  376  ADLVSCMVALPTQLFRSTGIPVCLWFFAKDKAAGKQGSIDRCGQVLFIDARELGDLVDRA  435
             DLV C+V+LP QLF ST IPVCLWF++++K  G++G  +R  ++LFIDARE+G++V R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRT  401

Query  436  ERALTNEEIVRIGDTFHAWRGSKSAAVKGIMYEDVPGFCKSATLAEIKATDYALTPGRYV  495
             + +++E+I ++++T+H+WRG++        YED++GFCK   L E+K  +Y LTPGRYV
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  496  GTPAVEDDGEPIDEKMARLSKALLEAFDESARLERVVREQLGRL  539
            G + VE+D EP+++KM R++  L E F  S  LE  +R  L  L
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

260) TBSG_01229 in NC_016768


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  431 bits (1623),  Expect = 6e-122, Method: Compositional matrix adjust.
 Identities = 254/524 (49%), Positives = 382/524 (73%), Gaps = 31/524 (5%)

Query  18   LKDTLWKAADKLRGSLSASQYKDVILGLVFLKYVSDAYDerreairaelaaeGMEESQIE  77
            + + LW+AADKLRGS+ A++YK+V LGL+FLKYVSD+++E+            + +    
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYK---------ELKQDPYA  56

Query  78   DLIDDPEQYQGYGVFVVPVSARWKFLAENTKGKPAVGGEPAKNIGQLIDEAMDAVMKANP  137
            D  +D ++Y +  +F VP  ARW+++ +N+K KP        +IGQLID AM A+ K N 
Sbjct  57   D-EEDQDEYLAENIFWVPKEARWQYINDNAK-KP--------EIGQLIDKAMIAIEKENE  106

Query  138  TLGGTLPRLYNKDNIDQRRLGELIDLFNSARFSRQGEHRARDLMGEVYEYFLGNFARAEG  197
            +L G LP+ Y +  +D+ +LG++IDLF + +++ + E R +D++G VYEYF+++FA AEG
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLF-TFKLG-DTESRKQDVLGRVYEYFIAKFASAEG  164

Query  198  KRGGEFFTPPSVVKVIVEVLEPSSGRVYDPCCGSGGMFVQTEKFIYEHDGDPKDVSIYGQ  257
            K +GEF+TP+S+VK++VE++EP  GR+YDPCCGSGGMFVQ+E+F+  H+G   D++IYGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  258  ESIEETWRMAKMNLAIHGIDNKGLGARWSDTFARDQHPDVQMDYVMANLPFNIKDWARNE  317
            ES   TW++AKMNLAI+GIDN +LG R +DTF  D H +++ DY++AN PFN  DW+++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  318  --EDPRWRFGVPPANNANYAWIQHILYKLAPGGRAGVVMAngsmssnsngegDIRAQIVE  375
              +D RW+FGVPP  NANYAWI+H++ KLAP G AG V+ANGSMS+++++E +IR +++E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  376  ADLVSCMVALPTQLFRSTGIPVCLWFFAKDKAAGKQGSIDRCGQVLFIDARELGDLVDRA  435
             DLV C+V+LP QLF ST IPVCLWF++++K  G++G  +R  ++LFIDARE+G++V R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRT  401

Query  436  ERALTNEEIVRIGDTFHAWRGSKSAAVKGIMYEDVPGFCKSATLAEIKATDYALTPGRYV  495
             + +++E+I ++++T+H+WRG++        YED++GFCK   L E+K  +Y LTPGRYV
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  496  GTPAVEDDGEPIDEKMARLSKALLEAFDESARLERVVREQLGRL  539
            G + VE+D EP+++KM R++  L E F  S  LE  +R  L  L
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

261) TBXG_001209 in NC_018078


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  431 bits (1623),  Expect = 6e-122, Method: Compositional matrix adjust.
 Identities = 254/524 (49%), Positives = 382/524 (73%), Gaps = 31/524 (5%)

Query  18   LKDTLWKAADKLRGSLSASQYKDVILGLVFLKYVSDAYDerreairaelaaeGMEESQIE  77
            + + LW+AADKLRGS+ A++YK+V LGL+FLKYVSD+++E+            + +    
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYK---------ELKQDPYA  56

Query  78   DLIDDPEQYQGYGVFVVPVSARWKFLAENTKGKPAVGGEPAKNIGQLIDEAMDAVMKANP  137
            D  +D ++Y +  +F VP  ARW+++ +N+K KP        +IGQLID AM A+ K N 
Sbjct  57   D-EEDQDEYLAENIFWVPKEARWQYINDNAK-KP--------EIGQLIDKAMIAIEKENE  106

Query  138  TLGGTLPRLYNKDNIDQRRLGELIDLFNSARFSRQGEHRARDLMGEVYEYFLGNFARAEG  197
            +L G LP+ Y +  +D+ +LG++IDLF + +++ + E R +D++G VYEYF+++FA AEG
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLF-TFKLG-DTESRKQDVLGRVYEYFIAKFASAEG  164

Query  198  KRGGEFFTPPSVVKVIVEVLEPSSGRVYDPCCGSGGMFVQTEKFIYEHDGDPKDVSIYGQ  257
            K +GEF+TP+S+VK++VE++EP  GR+YDPCCGSGGMFVQ+E+F+  H+G   D++IYGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  258  ESIEETWRMAKMNLAIHGIDNKGLGARWSDTFARDQHPDVQMDYVMANLPFNIKDWARNE  317
            ES   TW++AKMNLAI+GIDN +LG R +DTF  D H +++ DY++AN PFN  DW+++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  318  --EDPRWRFGVPPANNANYAWIQHILYKLAPGGRAGVVMAngsmssnsngegDIRAQIVE  375
              +D RW+FGVPP  NANYAWI+H++ KLAP G AG V+ANGSMS+++++E +IR +++E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  376  ADLVSCMVALPTQLFRSTGIPVCLWFFAKDKAAGKQGSIDRCGQVLFIDARELGDLVDRA  435
             DLV C+V+LP QLF ST IPVCLWF++++K  G++G  +R  ++LFIDARE+G++V R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRT  401

Query  436  ERALTNEEIVRIGDTFHAWRGSKSAAVKGIMYEDVPGFCKSATLAEIKATDYALTPGRYV  495
             + +++E+I ++++T+H+WRG++        YED++GFCK   L E+K  +Y LTPGRYV
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  496  GTPAVEDDGEPIDEKMARLSKALLEAFDESARLERVVREQLGRL  539
            G + VE+D EP+++KM R++  L E F  S  LE  +R  L  L
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

262) hsdM in NC_016934


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  431 bits (1623),  Expect = 6e-122, Method: Compositional matrix adjust.
 Identities = 254/524 (49%), Positives = 382/524 (73%), Gaps = 31/524 (5%)

Query  18   LKDTLWKAADKLRGSLSASQYKDVILGLVFLKYVSDAYDerreairaelaaeGMEESQIE  77
            + + LW+AADKLRGS+ A++YK+V LGL+FLKYVSD+++E+            + +    
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYK---------ELKQDPYA  56

Query  78   DLIDDPEQYQGYGVFVVPVSARWKFLAENTKGKPAVGGEPAKNIGQLIDEAMDAVMKANP  137
            D  +D ++Y +  +F VP  ARW+++ +N+K KP        +IGQLID AM A+ K N 
Sbjct  57   D-EEDQDEYLAENIFWVPKEARWQYINDNAK-KP--------EIGQLIDKAMIAIEKENE  106

Query  138  TLGGTLPRLYNKDNIDQRRLGELIDLFNSARFSRQGEHRARDLMGEVYEYFLGNFARAEG  197
            +L G LP+ Y +  +D+ +LG++IDLF + +++ + E R +D++G VYEYF+++FA AEG
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLF-TFKLG-DTESRKQDVLGRVYEYFIAKFASAEG  164

Query  198  KRGGEFFTPPSVVKVIVEVLEPSSGRVYDPCCGSGGMFVQTEKFIYEHDGDPKDVSIYGQ  257
            K +GEF+TP+S+VK++VE++EP  GR+YDPCCGSGGMFVQ+E+F+  H+G   D++IYGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  258  ESIEETWRMAKMNLAIHGIDNKGLGARWSDTFARDQHPDVQMDYVMANLPFNIKDWARNE  317
            ES   TW++AKMNLAI+GIDN +LG R +DTF  D H +++ DY++AN PFN  DW+++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  318  --EDPRWRFGVPPANNANYAWIQHILYKLAPGGRAGVVMAngsmssnsngegDIRAQIVE  375
              +D RW+FGVPP  NANYAWI+H++ KLAP G AG V+ANGSMS+++++E +IR +++E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  376  ADLVSCMVALPTQLFRSTGIPVCLWFFAKDKAAGKQGSIDRCGQVLFIDARELGDLVDRA  435
             DLV C+V+LP QLF ST IPVCLWF++++K  G++G  +R  ++LFIDARE+G++V R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRT  401

Query  436  ERALTNEEIVRIGDTFHAWRGSKSAAVKGIMYEDVPGFCKSATLAEIKATDYALTPGRYV  495
             + +++E+I ++++T+H+WRG++        YED++GFCK   L E+K  +Y LTPGRYV
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  496  GTPAVEDDGEPIDEKMARLSKALLEAFDESARLERVVREQLGRL  539
            G + VE+D EP+++KM R++  L E F  S  LE  +R  L  L
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

263) VFMJ11_B0053 in NC_011185


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  430 bits (1618),  Expect = 1e-121, Method: Compositional matrix adjust.
 Identities = 254/513 (50%), Positives = 376/513 (74%), Gaps = 19/513 (3%)

Query  9    AFFDTLWDSAVALRGALQPSEYKHPVLGLLFIKYVSDSFTELQVNLKEWVADANHDYYGM  68
            +F + LW++A  LRG+++++EYK+  LGL+F+KYVSDSF E   +LK       +D Y+ 
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELK-------QDPYA-  56

Query  69   DINDPDLYEAENVFWVPEEARWDFLVGSAKQTNIAKLLDEAVKAIEDNNSQLKGMLYRGF  128
            D +D D Y AEN+FWVP EARW+++ ++AK+ +I++L+D A+ AIE +N  LKG+L + +
Sbjct  57   DEEDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY  116

Query  129  GLLKIPSSKLGELIDLLGKLTFNSKEHRSADVLGQAYEFFLGKFALAEGASAGAFYTPES  188
            +   +   KLG++IDL+  + +   E R  DVLG+ YE+F++KFA AEG +AG FYTP S
Sbjct  117  ARPALDKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSS  175

Query  189  IVSTIVEVIAPTKGQLYEPAIGSGGMVVCSEKFMERNGGERGDISVYGQEYTHTTWKMAA  248
            IV  +VE+I P KG++Y+P  GSGGM V SE+F+E++ G  +DI++YGQE   TTWK+A 
Sbjct  176  IVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAK  235

Query  249  MNLTIRGLDFDLGKENADTLLNDLHKDLRADYIMANPPFNQEKWGAAKVAGDVRWKWGQP  308
            MNL+IRG+D DLG  NADT+ NDLHK+L+ADYI+ANPPFN   WG  ++ +D RW+ G P
Sbjct  236  MNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVP  295

Query  309  SDSNANYAWIQHMLYHLNETGRAGVVMANGAMTSTANNEDAIRKAIIEDDLVECMVALPP  368
            + +NANYAWI+HM+  L   G AG V+ANG+M++++++E  IRK +IE+DLVEC+V+LP 
Sbjct  296  PKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPG  355

Query  369  KLFINTQIPSCIFFFNKN------KKRKGETLFIDARHLGRLESRAQLVFDEEHIMEIAN  422
            +LF +TQIP C+ F+++N      K RK E LFIDAR++G++ SR+   F +E+I  +A+
Sbjct  356  QLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQ  415

Query  423  TYHAWAKTDFAEKDSKYVDIAGFCKSGKLEDIEKAGFVLSPGRYVGAAEVEEDEASYQED  482
            TYH+W  T+    D  Y DIAGFCK  +LE++ +  ++L+PGRYVG A+VEEDE ++++ 
Sbjct  416  TYHSWRGTN----DKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQK  471

Query  483  MATLTGQLSEQIKKSVSLDEQIKASLAEVGYDI  515
            M  +T++LSEQ+ KS  L++QI+ SL  +GY++
Sbjct  472  MKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

264) Desal_2735 in NC_012881


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  430 bits (1619),  Expect = 1e-121, Method: Compositional matrix adjust.
 Identities = 259/538 (49%), Positives = 383/538 (72%), Gaps = 42/538 (7%)

Query  12   DLDKRLWDAACKLLPSLDAAVYKHVVLGLVFLKYVGDSFEQRKYELLKN--FTNP-DHEY  68
            +++ +LW+AA KL  S+DAA YK+V LGL+FLKYV+DSFE+ KY  LK+  +++  D++ 
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEE-KYKELKQDPYADEEDQDE  63

Query  69   FLeddedpmeeieerdyyveeNVFWVPESGRWVNLMDCAKLNPGEPLPWGDKTFKSVGAL  128
            +L +                 N+FWVP  +RW  + D AK +P             +G L
Sbjct  64   YLAE-----------------NIFWVPKEARWQYINDNAK-KP------------EIGQL  93

Query  129  IDDAMTAVEKENPVLKNVLNKDYARLEVPDGKLSEVMDLINSIPFEHESLKSKDILGHVY  188
            ID AM A+EKEN  LK VL K+YAR  +   KL++++DL+ ++ + +   + +D+LG+VY
Sbjct  94   IDKAMIAIEKENESLKGVLPKEYARPALDKEKLGDIIDLF-TFKLGDTESRKQDVLGRVY  152

Query  189  EYFLgefaaaegkkggQYYTPKSIVNLITEMLRPYKGRIYDPACGSGGFFVSSEEFVETH  248
            EYF++ FA+AEGK++G++YTP SIV+L+ EM+ PYKGRIYDP CGSGG FV SE FVE H
Sbjct  153  EYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKH  212

Query  249  THRPADLAIYGQESNPTTWRLAAMNMAIRGIEYDFGKEPADTFTNDQHGTMRFDYIMANP  308
              R  D+AIYGQESNPTTW+LA MN+AIRGI+ D+G   ADTF ND H  ++ DYI+ANP
Sbjct  213  QGRLDDIAIYGQESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANP  272

Query  309  PFNLKGWGADSLANDVRWKYGLPPDNNANFAWMQHMIHHLSPKGKMGLLLANGSMSSATS  368
            PFN  +WG + L +D RW++G+PP  NAN+AW++HMI  L+P+G  G++LANGSMS++  
Sbjct  273  PFNASDWGQERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGK  332

Query  369  GEGDIRRKIIEDDLVECIVALPGQLFTNTQIPACIWFLNKDKSNGQNIEDLRNRTGEVLF  428
            +E +IR+++IE+DLVECIV+LPGQLF +TQIP C+WF++++K++  +    ++R  E+LF
Sbjct  333  DELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNGK----KERKNEILF  388

Query  429  IDARNCGYMLDRVLRDFHPEKDIQRIAHTLLSWQVGEKSAVKYEDVPGFCAAVTLDDIRK  488
            IDAR+ G M+ R L++F ++ DIQ++A+T  SW+  +     YED++GFC  V L+++++
Sbjct  389  IDAREIGHMVSRTLKEF-SDEDIQKVAQTYHSWRGTNDKY--YEDIAGFCKVVNLEEVKN  445

Query  489  HDYVLTPGRYVGAEEIEDNGPPFEEKMGELSTSLYEQMREGERLDKLIRENLAILGFG  546
            ++Y+LTPGRYVG  ++E++  PFE+KM  +++ L EQ   +  L+  IR +L  LG+G
Sbjct  446  NEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYG  503

265) FNFX1_0641 in NC_017450


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  425 bits (1600),  Expect = 4e-120, Method: Compositional matrix adjust.
 Identities = 254/516 (50%), Positives = 379/516 (74%), Gaps = 17/516 (3%)

Query  9    NTKSMEETLWDSANKLRGSVESSEYKHIVLGLIFLKFVSDTFEERREQLIAEGKEAFIDM  68
             T + EE LW++A+KLRGS++++EYK++ LGLIFLK+VSD+FEE+  +L  +      D 
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  69   VEFYTMENVFYLPEESRWSYIKQNAKQDDIALKIDTALSTIEKNNPSLKGALPDNYFSRL  128
             E Y  EN+F +P E+RW YI++NAK+ +I+  ID A+ +IEK+N SLKG LP +Y +R 
Sbjct  62   DE-YLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-ARP  119

Query  129  GLDVSKLSSLIDtinnintiAD-KGNDIVGRVYEYFLSKFAIAEGKGKGEFYTPKSIVNL  187
            +LD  KL+ +ID +      ++ + +D++GRVYEYF++KFA AEGK  GEFYTP SIV+L
Sbjct  120  ALDKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKL  179

Query  188  IANMIEPYKGKIYDPACGSGGMFVQSIKFIEAHKGNKKDISIYGQEYTGTTYKLAKMNLA  247
            + +MIEPYKG+IYDP CGSGGMFVQS +F+E H+G   DI+IYGQE   TT KLAKMNLA
Sbjct  180  LVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLA  239

Query  248  IRGISANLGDVPADTFFKDQHPDLKADFIMANPPFNQKDWRGANELLDDPRWAGYDVPPK  307
            IRGI  +LG+  ADTF +D H +LKAD+I+ANPPFN  DW G + LLDD RW  ++VPPK
Sbjct  240  IRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYRWQ-FGVPPK  297

Query  308  SNANYGWILNIVSKLSQNGVAGFILANGALSGGG-EEYKIRKKLIENDLVEAILILPQNM  366
            +NANY+WI +++SKL+ NG AGF+LANG++S +G +E  IRK+LIE+DLVE I+ LP ++
Sbjct  298  GNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQL  357

Query  367  FYTTNISVTIWILNANKKQREFEQNGKQKNHRDRTKEILFMDLRQKGVPFEKKFIQFDEE  426
            FY+T+I+V +W+++ NK      QNGK    ++R +EILF+D R+ G    + + +F +E
Sbjct  358  FYSTQIPVCLWFISNNK-----GQNGK----KERKNEILFIDAREIGHMVSRTLKEFSDE  408

Query  427  NIQEISDTYHTWQSDKEA-YQDIPEYCKSVTLEEVRAKDYSLVPSKYIEFVNRDENID-F  484
            +IQ +++TYH+W++ ++  Y+DI+ +CK V LEEV+ ++Y L P++Y+ + + +E+ + F
Sbjct  409  DIQKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPF  468

Query  485  DEKMKNLQTEFRellkqeeqskqellTVFKELGYEI  520
            ++KMK + +E+ E + +  +  +++   +  LGY +
Sbjct  469  EQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

266) NT08PM_1864 in NC_017764


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  424 bits (1597),  Expect = 6e-120, Method: Compositional matrix adjust.
 Identities = 250/559 (45%), Positives = 394/559 (71%), Gaps = 65/559 (11%)

Query  12   LDAKLWKSADKLRSSMDAANYKHVILSLIFLKYVSDAFLSRQQSIQQQLTDPEHLYYLDP  71
            ++ KLW++ADKLR+SMDAA+YK+V L+LIFLKYVSD+F  + + ++Q   DP        
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQ---DP--------  54

Query  72   SFYDSEEEYQQALANELEELDYYTEENVFWVPKTARWDVLKTKATTPVGAVLWQDEKGED  131
              Y  EE+ ++           Y  EN+FWVPK ARW+ ++                 ++
Sbjct  55   --YADEEDQDE-----------YLAENIFWVPKEARWQYIN-----------------DN  84

Query  132  VKMRNVSWLVDLALDTIEKSNDKLKAILSR-ISQYQVEDNRLIDLIGLFSDTSFANPEYN  190
             K  +++ L+D A+ +IEK N+ LK++L++  ++  ++ ++L D+I+LF+        ++
Sbjct  85   AKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEKLGDIIDLFT--------FK  136

Query  191  GEKLNLKSKDILGHVYEYFLGQFALAEGKQGGQYYTPKSIVNLIVEMLQPYQGRVFDPAM  250
                + + +D+LG+VYEYF+++FA AEGK++G++YTP SIV+L+VEM++PY+GR++DP  
Sbjct  137  LGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCC  196

Query  251  GSGGFFVSNDKFIETHAKEKHYTSDEQRRRISIYGQEANPTTWKLAAMNMVIRGIDFNFG  310
            GSGG FV +++F+E H        + +   I+IYGQE+NPTTWKLA MN+ IRGID ++G
Sbjct  197  GSGGMFVQSERFVEKH--------QGRLDDIAIYGQESNPTTWKLAKMNLAIRGIDNDLG  248

Query  311  KKHADSFTEDQHPDLRADFVMANPPFNLKEWWHKSLEQDARWQYGTPPEGNANFAWMQHM  370
             ++AD+F +D H +L+AD+++ANPPFN  +W +  L +D RWQ+G PP GNAN+AW++HM
Sbjct  249  ERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWIEHM  308

Query  371  LYHLAPTGSMALLLANGSMSSNTGGEGEIRKRLIDEDVVECMVALPGQLFTNTQIPACIW  430
            +  LAP G+ +++LANGSMS++  +E EIRK LI++D+VEC+V+LPGQLF +TQIP C+W
Sbjct  309  ISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVCLW  368

Query  431  FLSKDKKNGVSFDKKKRNRSGEVLFIDARQLGYMKDRVLRDFNDADTQKIVQTFHNWQYG  490
            F+S++K      ++ K++R  E+LFIDAR++G M  R L++F+D D QK+ QT+H+W+  
Sbjct  369  FISNNKG-----QNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGT  423

Query  491  EN--YQDEAGFCYSAKLADIQKHDYILTPGRYVGAVAQEEDCEPFAEKMQKLTALLNQQM  548
            ++  Y+D AGFC   +L ++++++YILTPGRYVG    EED EPF +KM+++T+ L++Q 
Sbjct  424  NDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQF  483

Query  549  AEGERLNAEIKKNLAGLGY  567
            A +  L+ +I+K+L GLGY
Sbjct  484  AKSKELEDQIRKSLEGLGY  502

267) VCD_001188 in NC_012668


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  420 bits (1580),  Expect = 1e-118, Method: Compositional matrix adjust.
 Identities = 239/515 (47%), Positives = 371/515 (73%), Gaps = 19/515 (3%)

Query  18   SFEETLWDAANKLRGSVESSEYKHIVLSLIFLKFISDTFEKQRQKLIDAGLEKHIDMVPA  77
            +FEE LW+AA+KLRGS++++EYK++ L+LIFLK++SD+FE + + L +     + D    
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ-DE  63

Query  78   YTKDNVFYLPEESRWSFIQKNAKQEDIALKIDTALSTIEKTNKALQGALPDNYFSRLGLD  137
            Y  +N+F +P E+RW +I+ NAK+ +I+  ID A+ +IEK N +L+G LP +Y +R +LD
Sbjct  64   YLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-ARPALD  122

Query  138  VSKLAALIDVIN-NIDTLANPHEDVVGRVYEYFLSKFAIAEGKGKGEFYTPKSIVNLIAE  196
              KL+ +ID++  +++   +  +DV+GRVYEYF++KFA AEGK  GEFYTP SIV+L+ E
Sbjct  123  KEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVE  182

Query  197  LIEPYKGKIYDPCCGSGGMFVQSMKFIENHKGNKKDISVYGQEYTGATYKLAKMNLAIRG  256
            +IEPYKG+IYDPCCGSGGMFVQS +F+E+H+G   DI++YGQE   +T KLAKMNLAIRG
Sbjct  183  MIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRG  242

Query  257  ISANLGAAAKDTFANDQHETLKADFIMANPPFNQKDWRASDELVDDHRWDGYETPPTSNA  316
            I  +LG    DTF ND H  LKAD+I+ANPPFN  DW + + L+DD RW+ +  PP +NA
Sbjct  243  IDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYRWQ-FGVPPKGNA  300

Query  317  NYGWILHMVSKLSENGVAGFILSNGALSGDGTEK-EIRKKLIENNLVEAIILLPRNMFYT  375
            NY+WI HM+SKL+ NG AGF+L+NG++S  G +  EIRK+LIE++LVE I+ LP ++FY+
Sbjct  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360

Query  376  TDISVTLWILNKNKKAHTVPHEDVTRNYRDREEEILFMDLRQRGEPFEKKFIQFSEQDIK  435
            T+I+V LW++++NK  +           ++R +EILF+D R+ G+   + + +FS++DI+
Sbjct  361  TQIPVCLWFISNNKGQNGK---------KERKNEILFIDAREIGHMVSRTLKEFSDEDIQ  411

Query  436  ELADTLHTWQQVGAEDK-YKDIAEYCYSATKEEIATKDYSLVPSKYIEFTNRDENIN-FD  493
             +A+T H+W+  G++DK Y DIA +C     EE+  ++Y L P++Y+ +++ +E+ + F+
Sbjct  412  KVAQTYHSWR--GTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFE  469

Query  494  EKMSNLKEQFSQLLAQEEKSKNELLNVFKELGYEI  528
            +KM  +  ++S+ +A+     +++ + +  LGY +
Sbjct  470  QKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

268) VCD_002511 in NC_012668


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  420 bits (1580),  Expect = 1e-118, Method: Compositional matrix adjust.
 Identities = 239/515 (47%), Positives = 371/515 (73%), Gaps = 19/515 (3%)

Query  18   SFEETLWDAANKLRGSVESSEYKHIVLSLIFLKFISDTFEKQRQKLIDAGLEKHIDMVPA  77
            +FEE LW+AA+KLRGS++++EYK++ L+LIFLK++SD+FE + + L +     + D    
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ-DE  63

Query  78   YTKDNVFYLPEESRWSFIQKNAKQEDIALKIDTALSTIEKTNKALQGALPDNYFSRLGLD  137
            Y  +N+F +P E+RW +I+ NAK+ +I+  ID A+ +IEK N +L+G LP +Y +R +LD
Sbjct  64   YLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-ARPALD  122

Query  138  VSKLAALIDVIN-NIDTLANPHEDVVGRVYEYFLSKFAIAEGKGKGEFYTPKSIVNLIAE  196
              KL+ +ID++  +++   +  +DV+GRVYEYF++KFA AEGK  GEFYTP SIV+L+ E
Sbjct  123  KEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVE  182

Query  197  LIEPYKGKIYDPCCGSGGMFVQSMKFIENHKGNKKDISVYGQEYTGATYKLAKMNLAIRG  256
            +IEPYKG+IYDPCCGSGGMFVQS +F+E+H+G   DI++YGQE   +T KLAKMNLAIRG
Sbjct  183  MIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRG  242

Query  257  ISANLGAAAKDTFANDQHETLKADFIMANPPFNQKDWRASDELVDDHRWDGYETPPTSNA  316
            I  +LG    DTF ND H  LKAD+I+ANPPFN  DW + + L+DD RW+ +  PP +NA
Sbjct  243  IDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYRWQ-FGVPPKGNA  300

Query  317  NYGWILHMVSKLSENGVAGFILSNGALSGDGTEK-EIRKKLIENNLVEAIILLPRNMFYT  375
            NY+WI HM+SKL+ NG AGF+L+NG++S  G +  EIRK+LIE++LVE I+ LP ++FY+
Sbjct  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360

Query  376  TDISVTLWILNKNKKAHTVPHEDVTRNYRDREEEILFMDLRQRGEPFEKKFIQFSEQDIK  435
            T+I+V LW++++NK  +           ++R +EILF+D R+ G+   + + +FS++DI+
Sbjct  361  TQIPVCLWFISNNKGQNGK---------KERKNEILFIDAREIGHMVSRTLKEFSDEDIQ  411

Query  436  ELADTLHTWQQVGAEDK-YKDIAEYCYSATKEEIATKDYSLVPSKYIEFTNRDENIN-FD  493
             +A+T H+W+  G++DK Y DIA +C     EE+  ++Y L P++Y+ +++ +E+ + F+
Sbjct  412  KVAQTYHSWR--GTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFE  469

Query  494  EKMSNLKEQFSQLLAQEEKSKNELLNVFKELGYEI  528
            +KM  +  ++S+ +A+     +++ + +  LGY +
Sbjct  470  QKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

269) VCD_002618 in NC_012668


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  420 bits (1580),  Expect = 1e-118, Method: Compositional matrix adjust.
 Identities = 239/515 (47%), Positives = 371/515 (73%), Gaps = 19/515 (3%)

Query  18   SFEETLWDAANKLRGSVESSEYKHIVLSLIFLKFISDTFEKQRQKLIDAGLEKHIDMVPA  77
            +FEE LW+AA+KLRGS++++EYK++ L+LIFLK++SD+FE + + L +     + D    
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ-DE  63

Query  78   YTKDNVFYLPEESRWSFIQKNAKQEDIALKIDTALSTIEKTNKALQGALPDNYFSRLGLD  137
            Y  +N+F +P E+RW +I+ NAK+ +I+  ID A+ +IEK N +L+G LP +Y +R +LD
Sbjct  64   YLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-ARPALD  122

Query  138  VSKLAALIDVIN-NIDTLANPHEDVVGRVYEYFLSKFAIAEGKGKGEFYTPKSIVNLIAE  196
              KL+ +ID++  +++   +  +DV+GRVYEYF++KFA AEGK  GEFYTP SIV+L+ E
Sbjct  123  KEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVE  182

Query  197  LIEPYKGKIYDPCCGSGGMFVQSMKFIENHKGNKKDISVYGQEYTGATYKLAKMNLAIRG  256
            +IEPYKG+IYDPCCGSGGMFVQS +F+E+H+G   DI++YGQE   +T KLAKMNLAIRG
Sbjct  183  MIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRG  242

Query  257  ISANLGAAAKDTFANDQHETLKADFIMANPPFNQKDWRASDELVDDHRWDGYETPPTSNA  316
            I  +LG    DTF ND H  LKAD+I+ANPPFN  DW + + L+DD RW+ +  PP +NA
Sbjct  243  IDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYRWQ-FGVPPKGNA  300

Query  317  NYGWILHMVSKLSENGVAGFILSNGALSGDGTEK-EIRKKLIENNLVEAIILLPRNMFYT  375
            NY+WI HM+SKL+ NG AGF+L+NG++S  G +  EIRK+LIE++LVE I+ LP ++FY+
Sbjct  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360

Query  376  TDISVTLWILNKNKKAHTVPHEDVTRNYRDREEEILFMDLRQRGEPFEKKFIQFSEQDIK  435
            T+I+V LW++++NK  +           ++R +EILF+D R+ G+   + + +FS++DI+
Sbjct  361  TQIPVCLWFISNNKGQNGK---------KERKNEILFIDAREIGHMVSRTLKEFSDEDIQ  411

Query  436  ELADTLHTWQQVGAEDK-YKDIAEYCYSATKEEIATKDYSLVPSKYIEFTNRDENIN-FD  493
             +A+T H+W+  G++DK Y DIA +C     EE+  ++Y L P++Y+ +++ +E+ + F+
Sbjct  412  KVAQTYHSWR--GTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFE  469

Query  494  EKMSNLKEQFSQLLAQEEKSKNELLNVFKELGYEI  528
            +KM  +  ++S+ +A+     +++ + +  LGY +
Sbjct  470  QKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

270) VCD_003046 in NC_012668


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  420 bits (1580),  Expect = 1e-118, Method: Compositional matrix adjust.
 Identities = 239/515 (47%), Positives = 371/515 (73%), Gaps = 19/515 (3%)

Query  18   SFEETLWDAANKLRGSVESSEYKHIVLSLIFLKFISDTFEKQRQKLIDAGLEKHIDMVPA  77
            +FEE LW+AA+KLRGS++++EYK++ L+LIFLK++SD+FE + + L +     + D    
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ-DE  63

Query  78   YTKDNVFYLPEESRWSFIQKNAKQEDIALKIDTALSTIEKTNKALQGALPDNYFSRLGLD  137
            Y  +N+F +P E+RW +I+ NAK+ +I+  ID A+ +IEK N +L+G LP +Y +R +LD
Sbjct  64   YLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-ARPALD  122

Query  138  VSKLAALIDVIN-NIDTLANPHEDVVGRVYEYFLSKFAIAEGKGKGEFYTPKSIVNLIAE  196
              KL+ +ID++  +++   +  +DV+GRVYEYF++KFA AEGK  GEFYTP SIV+L+ E
Sbjct  123  KEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVE  182

Query  197  LIEPYKGKIYDPCCGSGGMFVQSMKFIENHKGNKKDISVYGQEYTGATYKLAKMNLAIRG  256
            +IEPYKG+IYDPCCGSGGMFVQS +F+E+H+G   DI++YGQE   +T KLAKMNLAIRG
Sbjct  183  MIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRG  242

Query  257  ISANLGAAAKDTFANDQHETLKADFIMANPPFNQKDWRASDELVDDHRWDGYETPPTSNA  316
            I  +LG    DTF ND H  LKAD+I+ANPPFN  DW + + L+DD RW+ +  PP +NA
Sbjct  243  IDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYRWQ-FGVPPKGNA  300

Query  317  NYGWILHMVSKLSENGVAGFILSNGALSGDGTEK-EIRKKLIENNLVEAIILLPRNMFYT  375
            NY+WI HM+SKL+ NG AGF+L+NG++S  G +  EIRK+LIE++LVE I+ LP ++FY+
Sbjct  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360

Query  376  TDISVTLWILNKNKKAHTVPHEDVTRNYRDREEEILFMDLRQRGEPFEKKFIQFSEQDIK  435
            T+I+V LW++++NK  +           ++R +EILF+D R+ G+   + + +FS++DI+
Sbjct  361  TQIPVCLWFISNNKGQNGK---------KERKNEILFIDAREIGHMVSRTLKEFSDEDIQ  411

Query  436  ELADTLHTWQQVGAEDK-YKDIAEYCYSATKEEIATKDYSLVPSKYIEFTNRDENIN-FD  493
             +A+T H+W+  G++DK Y DIA +C     EE+  ++Y L P++Y+ +++ +E+ + F+
Sbjct  412  KVAQTYHSWR--GTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFE  469

Query  494  EKMSNLKEQFSQLLAQEEKSKNELLNVFKELGYEI  528
            +KM  +  ++S+ +A+     +++ + +  LGY +
Sbjct  470  QKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

271) MM_0429 in NC_003901


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  420 bits (1582),  Expect = 1e-118, Method: Compositional matrix adjust.
 Identities = 262/570 (46%), Positives = 395/570 (70%), Gaps = 74/570 (12%)

Query  11   DLDNQLWRAADKLRSNLDAANYKHVVLGLIFLKYVSDAFEERQQELTELFQKDDDDNIYY  70
            +++++LW+AADKLR+++DAA+YK+V LGLIFLKYVSD+FEE+ +EL              
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELK-------------  51

Query  71   LPREDYDSDEAYQQAIAEELEIGDYYTEKNVFWVPKTARWNKLRDVITLPTGSVIWQDEQ  130
                        Q++ A+E + ++Y +E N+FWVPK ARW+ + D               
Sbjct  52   ------------QDPYADEEDQDEYLAE-NIFWVPKEARWQYIND---------------  83

Query  131  GEDVKLRSVSWLIDNAFDDIEKANPKLKGILNR-ISQYQLDADKLIGLINEFSLTSFNNP  189
              + K   ++ LID+A   IEK N  LKG+L +  ++  LD +KL ++I+ F+       
Sbjct  84   --NAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEKLGDIIDLFT-------  134

Query  190  EYNGEKLNLKSKDILGHVYEYFLGQFALAEGKQGGQYYTPKSIVTLIVEMLEPYKGRVYD  249
             ++    + + +D+LG+VYEYF+++FA AEGK++G++YTP SIV L+VEM+EPYKGR+YD
Sbjct  135  -FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYD  193

Query  250  PAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDF  309
            P  GSGG FV S++F+EKH          +  +I++YGQESNPTTWKLA MN+ IRGID 
Sbjct  194  PCCGSGGMFVQSERFVEKHQG--------RLDDIAIYGQESNPTTWKLAKMNLAIRGIDN  245

Query  310  NFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPT  369
            ++G +NAD+F +D H +L+AD++++NPPFN  DW +E+L DD RW +          PP 
Sbjct  246  DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGV--------PPK  297

Query  370  GNANFAWMLHMLYHLAPTGSMALLLANGSMSSNTNNEGEIRKTLVEQDLVECMVALPGQL  429
            GNAN+AW+ HM+  LAP G+ +++LANGSMS++ ++E EIRK L+EQDLVEC+V+LPGQL
Sbjct  298  GNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQL  357

Query  430  FTNTQIPACIWFLTKDKNAKNGKRDRRGQVLFIDARKLGYMKDRVLRDFKDEDIQKLADT  489
            F +TQIP C+WF++++K ++NGK++R+ ++LFIDAR +G M  R L++F DEDIQK+A+T
Sbjct  358  FYSTQIPVCLWFISNNK-GQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQT  416

Query  490  FHNWQQEWSEE---NNQAGFCFSADLALIRKNDFVLTPGRYVGAEAEEDDGILFADKMAV  546
            +H+W+   +++   ++ AGFC   +L  +++N+++LTPGRYVG    E+D   F +KM  
Sbjct  417  YHSWRG--TNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKR  474

Query  547  LTSQLKEQFEESRKLEAQIKQNLAGLGFDV  576
            +TS+L EQF  S+ LE QI+++L GLG++V
Sbjct  475  ITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

272) hsdM in NC_020547


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  420 bits (1580),  Expect = 2e-118, Method: Compositional matrix adjust.
 Identities = 259/552 (47%), Positives = 377/552 (69%), Gaps = 68/552 (12%)

Query  24   RSSLDAANYKHIVLGLIFLKYVSDAFDERQSELKTLFAHQDDNNIYYMARDHYDSDEEYQ  83
            R+S+DAA+YK++ LGLIFLKYVSD+F+E+  ELK               +D Y  +E+ +
Sbjct  18   RGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELK---------------QDPYADEEDQD  62

Query  84   QAIADELEILDYYQEKNVFWVPKAARWLSIRNAAALPIGSIIWQDEQGQDVKLRSVSWLI  143
            +           Y   N+FWVPK ARW  I + A  P        E GQ         LI
Sbjct  63   E-----------YLAENIFWVPKEARWQYINDNAKKP--------EIGQ---------LI  94

Query  144  DNAFDEIEKANPKLKGILNR-IGQYQLDNDKLLDLINTFSDTSFTNPEYNGEQLSLHSKD  202
            D+A   IEK N  LKG+L +  ++  LD++KL D+I+ F+        ++  +   + +D
Sbjct  95   DKAMIAIEKENESLKGVLPKEYARPALDKEKLGDIIDLFT--------FKLGDTESRKQD  146

Query  203  ILGHVYEYFLGQFALAEGKQGGQYYTPKSIVTLIVEMLQPYKGRVYDPAMGSGGFFVSSE  262
            +LG+VYEYF+++FA AEGK++G++YTP SIV L+VEM++PYKGR+YDP  GSGG FV SE
Sbjct  147  VLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSE  206

Query  263  KFIEQHAQEKHYKASEQKKHISIYGQESNPTTWKLAAMNMAIRGIDFNFGKKNADSFLDD  322
            +F+E+H          +  +I+IYGQESNPTTWKLA MN+AIRGID ++G +NAD+F +D
Sbjct  207  RFVEKHQ--------GRLDDIAIYGQESNPTTWKLAKMNLAIRGIDNDLGERNADTFHND  258

Query  323  QHPDLRADFVMANPPFNIKDWWHASLESDVRWKYGTPPQGNANFAWMQHMLHHLSPTGSM  382
             H +L+AD+++ANPPFN  DW +  L  D RW++G PP+GNAN+AW++HM+  L+P G+ 
Sbjct  259  LHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTA  318

Query  383  ALLLANGSMSSNTNNEGEIRKNLIEADLVECIVALPGQLFTNTQIPACIWFLTKDKKNGL  442
            +++LANGSMS++ ++E EIRKNLIE DLVECIV+LPGQLF +TQIP C+WF++++K    
Sbjct  319  GFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNKG---  375

Query  443  SLDKKKANREGKTLFIDARNLGYMKDRVLRDFTDADIAKITNALHAWQQGENFEGEAYQD  502
              ++ K +R    LFIDAR++G M  R L++F+D DI K++++ H+W+  ++     Y+D
Sbjct  376  --QNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGTND---KYYED  430

Query  503  EKGFCFSAELKDIQKHDYVLTPGRYVGAVEQEDDGEPFAEKMLRLTAQLKEQFAESAVLE  562
              GFC   +L ++++++Y+LTPGRYVG  + E+D EPF +KM R+T++L EQFA S  LE
Sbjct  431  IAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELE  490

Query  563  SEIKKNLKGLGY  574
             +I+K+L GLGY
Sbjct  491  DQIRKSLEGLGY  502

273) Mbur_0483 in NC_007955


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  420 bits (1580),  Expect = 2e-118, Method: Compositional matrix adjust.
 Identities = 262/561 (47%), Positives = 390/561 (70%), Gaps = 66/561 (11%)

Query  12   FETKLWKAADKLRSNMDVANYKHVVLGLIFLKYVSDAFEERQNELVELFKKDDDENIYYL  71
            FE KLW+AADKLR++MD A+YK+V LGLIFLKYVSD+FEE+       +K         L
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEK-------YKE--------L  50

Query  72   PREDYSSTEEYQHAIAEELEIRDYYAEKNVFWVPKTARWDILKEKSVLSLNTVIWQNEQG  131
             ++ Y+  E+           +D Y   N+FWVPK ARW+ +++++              
Sbjct  51   KQDPYADEED-----------QDEYLAENIFWVPKEARWQYINDNA--------------  85

Query  132  KDVKLKSVSWLIDNALDEIEKANPKLKGILNR-IGQYQLDSEKLIGLINNFSNTRFHHPE  190
               K   ++ LID+A+  IEK N  LKG+L +  ++  LD EKL ++I+ F+   F   +
Sbjct  86   ---KKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEKLGDIIDLFT---FKLGD  139

Query  191  FNDKKLNLKSKDILGHVYEYFLGQFALAEGKQGGQYYTPKSIVTLIVEMLEPYKGRVYDP  250
             + +K     +D+LG+VYEYF+++FA AEGK++G++YTP SIV L+VEM+EPYKGR+YDP
Sbjct  140  TESRK-----QDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDP  194

Query  251  AMGSGGFFVSSDKFIENHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMAIRGIDFN  310
              GSGG FV S++F+E+H          +  +I++YGQESNPTTWKLA MN+AIRGID +
Sbjct  195  CCGSGGMFVQSERFVEKHQG--------RLDDIAIYGQESNPTTWKLAKMNLAIRGIDND  246

Query  311  FGKKNADSFLDDQHPDLRADFVMANPPFNMKEWWHEKLADDPRWKYGTPPKNNANFAWMQ  370
            +G +NAD+F +D H +L+AD+++ANPPFN  +W +E+L DD RW++G PPK NAN+AW++
Sbjct  247  LGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWIE  306

Query  371  HMLHHLAPTGSMALLLANGSMSSNTNNEGKIRKTLVENDIVECMVALPGQLFTNTQIPAC  430
            HM+  LAP G+ +++LANGSMS++ ++E  IRK L+E+D+VEC+V+LPGQLF +TQIP C
Sbjct  307  HMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVC  366

Query  431  ICFLTkdkaakddkRNRHGEILFIDARNLGFMKDRVLRDFKDEDIQRIADTFHTWQHNWS  490
            + F++ ++ ++++K++R  EILFIDAR++G M  R L++F DEDIQ++A+T+H+W+   +
Sbjct  367  LWFIS-NNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRG--T  423

Query  491  EDK---NEPGFCFSANHATIEKHNFVLTPGRYVGAEAEVDDGIPFDAKMASLTSKLKTQF  547
            +DK   + +GFC   N   + +++++LTPGRYVG     +D  PF+ KM  +TS L  QF
Sbjct  424  NDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQF  483

Query  548  EESDKLEEQIRKNLAGLGYDI  568
              S  LE+QIRK+L GLGY++
Sbjct  484  AKSKELEDQIRKSLEGLGYGV  504

274) Pedsa_1279 in NC_015177


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  419 bits (1577),  Expect = 2e-118, Method: Compositional matrix adjust.
 Identities = 248/512 (49%), Positives = 370/512 (73%), Gaps = 17/512 (3%)

Query  11   EEILWDSANKLRGSVEPSEYKHVVLSLIFLKFASDKFIRRREELIKEGQNAFLEIPEFYQ  70
            EE LW++A+KLRGS++++EYK+V L+LIFLK+ SD F  +  EL K++  A  E  + Y 
Sbjct  7    EEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKEL-KQDPYADEEDQDEYL  65

Query  71   AENVFYLPVESRWTYIIENAKQEDITLKVDSALKTIERTNKSLEGALPDNYFSRLGLDQS  130
            AEN+F +P E+RW YI +NAK+ +I   +D A+ +IE+ N SL G LP +Y +R +LD+ 
Sbjct  66   AENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-ARPALDKE  124

Query  131  KFSALLDTIN-NIDTLRDEAQDIVGRVYEYFLSKFAIAEGKGKGEFYTPKSIVNLIAEMI  189
            K++ ++D +  +++      QD++GRVYEYF++KFA AEGK  GEFYTP SIV+L+ EMI
Sbjct  125  KLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMI  184

Query  190  EPYKGKIYDPSCGSGGMFVQSLKFIEKHQGNKKDISIYGQELTNTTFKLAKMNLAIRGIS  249
            EPYKG+IYDP CGSGGMFVQS +F+EKHQG   DI+IYGQE   TT KLAKMNLAIRGI 
Sbjct  185  EPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGID  244

Query  250  ANLGNKAADTFADDQHKELKADYIMANPPFNLKDWRAENELTDDTRWTGYEVPPKSNANY  309
             +LG++ ADTF +D HK LKADYI+ANPPFN  DW +++ L DD RW  + VPPK+NANY
Sbjct  245  NDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYRWQ-FGVPPKGNANY  302

Query  310  AWILNMISKLSQNGVAGFILANGALSGGG-EEYKIRKQIIENDLVEAIVILPRAMFYSTD  368
            AWI +MISKL+ NG AGF+LANG++S +G +E  IRK++IE+DLVE IV LP  +FYST+
Sbjct  303  AWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQ  362

Query  369  ISVTLWILNRNKTERTVEVNDGIKNYRNRKGEVLFMDLRQKGEPFEKKFIQFSENDIEYI  428
            I+V LW+++ NK +            ++RK E+LF+D R+ G+   + + +FS++DI+ +
Sbjct  363  IPVCLWFISNNKGQNGK---------KERKNEILFIDAREIGHMVSRTLKEFSDEDIQKV  413

Query  429  TGTYHNWQQKDFESKYTNEAEYCYSANVEEIRKKDYSLVPSKYIEFVNRDENLD-YDTQM  487
            + TYH+W+  + +  Y + A +C   N+EE+++++Y L P++Y+ + + +E+ + ++ +M
Sbjct  414  AQTYHSWRGTN-DKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKM  472

Query  488  QSLQTELKDLFQQEEALKQEVANVFKSLGYEL  519
            + + +EL + F +   L +++ + + +LGY +
Sbjct  473  KRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

275) Fluta_2798 in NC_015321


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  419 bits (1577),  Expect = 2e-118, Method: Compositional matrix adjust.
 Identities = 247/518 (48%), Positives = 372/518 (72%), Gaps = 21/518 (4%)

Query  8    NTKSIEETLWDSANKLRGTVESSEYKHVVLALIFLKFTSDKFEERRQELVAEGKDKYLEM  67
             T ++EE LW++A+KLRG+++++EYK+V L+LIFLK+ SD FEE+ +EL    +D Y + 
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKEL---KQDPYADE  58

Query  68   --PEFYNMKNVFFLAEESRWSYIIANAKQNDISLKIDTALHTVEKNNASLKGALPDNYFS  125
               + Y   N+F ++ E+RW YI  NAK+ +I+  ID A+ ++EK+N SLKG LP +Y +
Sbjct  59   EDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-A  117

Query  126  RLNMDVSKLAALLDTIN-NIDTLKDKQQDIVGRVYEYFLSKFALAEGKGKGEFYTPKSIV  184
            R  +D  KL+ ++D +  +++    ++QD++GRVYEYF++KFA AEGK  GEFYTP SIV
Sbjct  118  RPALDKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIV  177

Query  185  NLIAEMIEPYKGVIYDPACGSGGMFVQSMKFIQSHHGNTKDISIYGQEYTNTTYKLAKMN  244
            +L+ EMIEPYKG IYDP CGSGGMFVQS +F++ H+G   DI+IYGQE   TT KLAKMN
Sbjct  178  KLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMN  237

Query  245  LAIRGISANLGAVAADTFAKDQHPDLKADFIMANPPFNQKDWRASDELTDDPRWKGYDLP  304
            LAIRGI  +LG   ADTF +D H +LKAD+I+ANPPFN  DW + + L DD RW+ +++P
Sbjct  238  LAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYRWQ-FGVP  295

Query  305  PTSNANYAWILNMASKLSENGVAGFILANGALSGGG-EEYKIRKKLIENGVVEAVVILPR  363
            P +NANYAWI +M SKL+ NG AGF+LANG++S +G +E  IRK+LIE+++VE +V LP 
Sbjct  296  PKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPG  355

Query  364  SMFYTTDISVTLWILNNNKTERVVKHPDETRNYRNRKDEILFMDLREIGEPFEKKFTQFS  423
             +FY+T+I+V LW+++NNK +   K         +RK+EILF+D REIG+   + + +FS
Sbjct  356  QLFYSTQIPVCLWFISNNKGQNGKK---------ERKNEILFIDAREIGHMVSRTLKEFS  406

Query  424  EDHIKEIAGTYHTWQQKNSN-YKDIPEYCYSATLENVKSKDYSLVPSKYIEFVNRDENID  482
            +++I+ +A TYH+W+  N + Y DI+ +C    LE+VK+++Y L P++Y+ + + +E+ +
Sbjct  407  DEDIQKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEE  466

Query  483  -FDDKMKSLQAEFTELLKAEESSKKDLMNVFKELGYGI  519
             F++KMK + +E++E +        ++ + +  LGYG+
Sbjct  467  PFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

276) EJP617_05140 in NC_017445


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  419 bits (1576),  Expect = 3e-118, Method: Compositional matrix adjust.
 Identities = 265/560 (48%), Positives = 398/560 (72%), Gaps = 64/560 (11%)

Query  12   LDSKFWKAADKLRANMDAANYKHVVLGLIFLKYVSDAFEARQKELTKLFREVGNADNSYA  71
            ++ K+W+AADKLR++MDAA+YK+V LGLIFLKYVSD+FE + KEL               
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELK--------------  51

Query  72   IPREEYDSEAAYQQAIDQELEVEDYYAEKNVFWVPKAARWETLKSQAALPVGSVLGLDAK  131
                    + +Y +  DQ+    +Y AE N+FWVPK ARW+ ++ +A  P          
Sbjct  52   --------QDPYADEEDQD----EYLAE-NIFWVPKEARWQYINDNAKKP----------  88

Query  132  GKEVTLRSVSLLIDNALDKIEQSNDKLKGIINR-IAHYQLGNEVLIGLINTFSDANFSNP  190
                    ++ LID+A+  IE+ N+ LKG++ +  A+  L++E L ++I+ F+       
Sbjct  89   -------EIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEKLGDIIDLFT-------  134

Query  191  QYNGEQLKLSSKDILGHVYEYFLGQFALAEGKQGGQYYTPKSIVTLIVEMLQPYQGRVYD  250
             ++  +     +D+LG+VYEYF+++FA AEGK++G++YTP SIV L+VEM++PY+GR+YD
Sbjct  135  -FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYD  193

Query  251  PAMGSGGFFVSSDRFIEQHADAQRYNAAEQKQKIVVYGQESNPTTWRLAAMNMAIRGIDF  310
            P  GSGG FV S+RF+E+H +        + + I +YGQESNPTTW+LA MN+AIRGID 
Sbjct  194  PCCGSGGMFVQSERFVEKHQG--------RLDDIAIYGQESNPTTWKLAKMNLAIRGIDN  245

Query  311  EFGTKNADTLLDDQHPDLRADFVMANPPFNMKEWWNAKLENDVRWQYGTPPQGNANFAWM  370
            ++G +NADT+ +D H +L+AD+++ANPPFN  +W + +L +D RWQ+G PP+GNAN+AW+
Sbjct  246  DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWI  305

Query  371  QHMIHHLAPKgamalllangsmssnsnnegeIRRKLVEADLVECMVALPGQLFTNTQIPA  430
            +HMI  LAP+G+ +++LANGSMS+++++E EIR++L+E DLVEC+V+LPGQLF +TQIP 
Sbjct  306  EHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPV  365

Query  431  CIWLLTKDKSGGNGKAHRKGEVLFIDARQTGFMKDRVLRDFTTEDIAKIADTFHAWQTDK  490
            C+W+++++K G NGK +RK E+LFIDAR+ G M  R L++F+ EDI K+A+T+H+W+  +
Sbjct  366  CLWFISNNK-GQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGTN  424

Query  491  D--YQDQAGFCFAASLADIQKNDFVLTPGRYVGAAEQEEDAEPFAEKMTRLTQQLKVQLA  548
            D  Y+D AGFC   +L ++++N+++LTPGRYVG A+ EED EPF +KM R+T +L  Q+A
Sbjct  425  DKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFA  484

Query  549  ESAGLEKQIKANLGGLGYEL  568
             S  LE QI+ +L GLGY +
Sbjct  485  KSKELEDQIRKSLEGLGYGV  504

277) hsdM in NC_002663


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  418 bits (1574),  Expect = 5e-118, Method: Compositional matrix adjust.
 Identities = 245/559 (44%), Positives = 390/559 (70%), Gaps = 65/559 (11%)

Query  12   LDAKLWKSADKLRSNIEAANYKHVILSLIFLKYVSDAFLARQHSIQQQLTDPEHLYYLDP  71
            ++ KLW++ADKLR++++AA+YK+V L+LIFLKYVSD+F  +   ++Q   DP        
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQ---DP--------  54

Query  72   SFYDSEEEYQQALANELEQLDYYTEENVFWVPKTARWDVLKTKATTPVGAVLWQDEQGED  131
              Y  EE+ ++           Y  EN+FWVPK ARW+ ++                 ++
Sbjct  55   --YADEEDQDE-----------YLAENIFWVPKEARWQYIN-----------------DN  84

Query  132  VKMRNVSWLVDLALDTIEKSNDKLKNILARI-SQYQVEDNRLIELISLFSDTYFANPEYQ  190
             K  +++ L+D A+ +IEK N+ LK +L++  ++  ++ ++L ++I LF+        ++
Sbjct  85   AKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEKLGDIIDLFT--------FK  136

Query  191  GEKLNLKSKDILGHVYEYFLGKFALAEGKNGGEYYTPKSIVNLIVEMLQPYQGRVFDPAM  250
                + + +D+LG+VYEYF++KFA AEGKN+GE+YTP SIV+L+VEM++PY+GR++DP  
Sbjct  137  LGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCC  196

Query  251  GSGGFFVSNDKFIETHAKEKHYASDEQRRRISIYGQESTSTTWKLAVMNMVIRGIDFNFG  310
            GSGG FV +++F+E H        + +   I+IYGQES +TTWKLA MN+ IRGID ++G
Sbjct  197  GSGGMFVQSERFVEKH--------QGRLDDIAIYGQESNPTTWKLAKMNLAIRGIDNDLG  248

Query  311  KKHADSFTEDQHPDLRADFVMANPPFNKDDWWHESLEHDARWQYGTPPVGNANFAWVQHM  370
             ++AD+F +D H +L+AD+++ANPPFN  DW +E L +D RWQ+G PP GNAN+AW++HM
Sbjct  249  ERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWIEHM  308

Query  371  LYHLAPTGSMALLLANGSMSSNTGGEGEIRKRLIDEDVVECMVSLPDKLFTNTRIPACIW  430
            +  LAP G+ +++LANGSMS++  +E EIRK LI++D+VEC+V+LP++LF +T+IP C+W
Sbjct  309  ISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVCLW  368

Query  431  FLTKDKKNGVSFDKKKRNRSGEVLFIDARQLGYMKDRVLRDFTDADTQKIVQTFHNWQYG  490
            F++++K      ++ K++R  E+LFIDAR++G M  R L++F+D D QK+ QT+H+W+  
Sbjct  369  FISNNKG-----QNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGT  423

Query  491  ES--YQDEAGFCYSAKLADIQKHDYILTPGRYVGAVAQEEDCEPFAEKMQKLTALLNQQM  548
            +   Y+D AGFC   +L ++++++YILTPGRYVG    EED EPF +KM+++T+ L++Q 
Sbjct  424  NDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQF  483

Query  549  TEGERLNAEIKKNLAGLGY  567
            + +  L+ +I+K+L GLGY
Sbjct  484  AKSKELEDQIRKSLEGLGY  502

278) I917_19320 in NC_021192


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  417 bits (1571),  Expect = 8e-118, Method: Compositional matrix adjust.
 Identities = 251/524 (48%), Positives = 378/524 (73%), Gaps = 31/524 (5%)

Query  18   LKDTLWKAADKLRGSLXXSQYKDVILGLVFLKYVSDAYDerreairaelaaeGMEESQIE  77
            + + LW+AADKLRGS+  ++YK+V LGL+FLKYVSD+++E+            + +    
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYK---------ELKQDPYA  56

Query  78   DLIDDPEQYQGYGVFVVPVSARWKFLAENXKGKPAVGGEPAKNIGQLIDEAMDAVMKANP  137
            D  +D ++Y +  +F VP  ARW+++ +N K KP        +IGQLID AM A+ K N 
Sbjct  57   D-EEDQDEYLAENIFWVPKEARWQYINDNAK-KP--------EIGQLIDKAMIAIEKENE  106

Query  138  TLGGTLPRLYNKDNIDQRRLGELIDLFNSARFSRQGEHRARDLMGEVYEYFLGNFARAEG  197
            +L G LP+ Y +  +D+ +LG++IDLF + +++ + E R +D++G VYEYF+++FA AEG
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLF-TFKLG-DTESRKQDVLGRVYEYFIAKFASAEG  164

Query  198  KRGGEFFTPPSVVKVIVEVLEPSSGRVYDPCCGSGGMFVQTEKFIYEHDGDPKDVSIYGQ  257
            K +GEF+TP+S+VK++VE++EP  GR+YDPCCGSGGMFVQ+E+F+  H+G   D++IYGQ
Sbjct  165  KNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQ  224

Query  258  ESIEETWRMAKMNLAIHGIDNKGLGARWSDTFARDQHPDVQMDYVMANPPFNIKDWARNE  317
            ES   TW++AKMNLAI+GIDN +LG R +DTF  D H +++ DY++ANPPFN  DW+++ 
Sbjct  225  ESNPTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQER  283

Query  318  --EDPRWRFxxppannanYAWIQHILYKLAPGGRAGVVMAngsmssnsngegDIRAQIVE  375
              +D RW+F  PP  NANYAWI+H++ KLAP G AG V+ANGSMS+++++E +IR +++E
Sbjct  284  LLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIE  343

Query  376  ADLVSCMVALPTQLFRSTGIPVCLWFFAKDKAAGKQGSIDRCGQVLFIDARELGDLVDRA  435
             DLV C+V+LP QLF ST IPVCLWF++++K  G++G  +R  ++LFIDARE+G++V R+
Sbjct  344  QDLVECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRT  401

Query  436  ERALTNEEIVRIGDTFHAWRGSKSAAVKGIMYEDVPGFCKSATLAEIKATDYALTPGRYV  495
             + +++E+I ++++T+H+WRG++        YED++GFCK   L E+K  +Y LTPGRYV
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  496  GTPAVEDDGEPIDEKMARLSKALLEAFDESARLXRVVREQLGRL  539
            G + VE+D EP+++KM R++  L E F  S  L   +R  L  L
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

279) Metok_1382 in NC_015636


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  416 bits (1566),  Expect = 2e-117, Method: Compositional matrix adjust.
 Identities = 261/524 (50%), Positives = 378/524 (73%), Gaps = 34/524 (6%)

Query  17   LWGSAEKLRGSVDPSRYKDIVLGIIFLKYASDMFEERRRELIDLSKNPKSDYYCETEDEL  76
            LW +A+KLRGS+D++ YK++ LG+IFLKY SD FEE+ +EL       K D Y + ED+ 
Sbjct  10   LWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKEL-------KQDPYADEEDQ-  61

Query  77   IGLLEDNEEYISENVFYVPEQSRWDYLIKNAKNPNIAKLLDDAMILLEKHNSKLKGVLPK  136
                   +EY++EN+F VP ++RW+Y+  NAK+P+I++L+D AMI +EK+N  LKGVLPK
Sbjct  62   -------DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPK  114

Query  137  EYVRAEIPHEKLGALLDLFNNINYKEFIENKDESIGDVFGTIYGYFMRNFSQKLGQKGGE  196
            EY R+ +  EKLG ++DLF    +K  + + +    DV+G +Y YF+ +F+   G+++GE
Sbjct  115  EYARPALDKEKLGDIIDLFT---FK--LGDTESRKQDVLGRVYEYFIAKFASAEGKNAGE  169

Query  197  FFTPECIVKLLVELVEPLRGRIYDPACGSGGMFVQSSKFVKEYLKNGNGIDLAIYGQELN  256
            F+TP  IVKLLVE++EP +GRIYDP CGSGGMFVQS +FV     +G   D+AIYGQE N
Sbjct  170  FYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEK--HQGRLDDIAIYGQESN  227

Query  257  SSNVRICKMNLAIHRLSHD-QIKQGDTLSNDKHRDLKADYIITNPPFNYKDYDQKVLEGD  315
            ++  ++ KMNLAI+ + +D   +++DT+ ND H++LKADYI++NPPFN  D +Q  L +D
Sbjct  228  PTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDD  287

Query  316  VRFPYGIVPKKAENAKSGNANFLWIQHFIYHLSDNGIAAFIMANGSLSAggkegeirkki  375
             R  +G+ PK       GNAN+ WI+H I  L+ NG A+F++ANGS+S++GK+    +K 
Sbjct  288  YRWQFGVPPK-------GNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKN  340

Query  376  ieegi-VDCIISLPNKMFYTTQIPACIWVIDKNKENGRFRSRKWETLFIDAREIYTPVAR  434
            + E   V+CI++LP ++FY+TQIP C+W I +NK +   + RK E LFIDAREI   V+R
Sbjct  341  LIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSR  400

Query  435  NQNEFSDEQIKKIADVYRCYRG-EDGYPDYKDEKGFCKVATIDEIREQDYILTPGRYVGI  493
              +EFSDE+I+K+A+ Y+  RG +D Y  Y D  GFCKV  ++E+++++YILTPGRYVG+
Sbjct  401  TLKEFSDEDIQKVAQTYHSWRGTNDKY--YEDIAGFCKVVNLEEVKNNEYILTPGRYVGL  458

Query  494  ADVEEDSEPFEDKMERLTKELSEHFKKSRELEERIKNNLSELGF  537
            ADVEED EPFE+KM R+T ELSE+F KS+ELE++I+++L  LG+
Sbjct  459  ADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGY  502

280) D650_9870 in NC_020833


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  416 bits (1565),  Expect = 3e-117, Method: Compositional matrix adjust.
 Identities = 251/544 (47%), Positives = 380/544 (70%), Gaps = 56/544 (10%)

Query  72   LDQTLWTAADKLRKNLDAANYKHIVLGFIFLKYISDSFTDFQAKLKTQLTTPESELYLDP  131
            +++ LW AADKLR ++DAA+YK++ LG+IFLKY+SDSF   + K K           L  
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSF---EEKYKE----------LKQ  52

Query  132  ALFDEQEFSQILAEELEQRDYYAAENIFWVPEQARWDNIKSLSKLNLGDELPWGDKFKGV  191
              + ++E          ++D Y AENIFWVP +ARW+ I+  +K               +
Sbjct  53   DPYADEE----------DQDEYLAENIFWVPKEARWQYINDNAKKP------------EI  90

Query  192  SRLIDDAFEAIERENPKLKGVLQRIAGFGVPD---EMLTGLIDLFSRTNFTQPMHNGEPV  248
            ++LID A  AIE+EN  LKGVL +   ++ P    E L ++IDLF+   F   + + E+ 
Sbjct  91   GQLIDKAMIAIEKENESLKGVLPK--EYARPALDKEKLGDIIDLFT---FK--LGDTES-  142

Query  249  HLQAKDILGHVYEYFLGQFALAEGKKGGQYFTPKSIVTLIVEMLEPYSGRIYDPAMGSGG  308
              + +D+LG+VYEYF+++FA AEGK++G+++TP SIV L+VEM+EPY GRIYDP  GSGG
Sbjct  143  --RKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGG  200

Query  309  FFVQADRFIQAHAGNRNAISVYGQESNSTTRKLAVMNMAIRGIPFDFGDKPEDTLLNPLH  368
             FVQ++RF++ H G  + I++YGQESN+TT+KLA MN+AIRGI  D+G++  DT+ N LH
Sbjct  201  MFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLH  260

Query  369  IDKKMDVVMANPPFNQKEWWNESLANDPRWAYGTPPQGNANFAWLQHMIYHLSPKGKMAL  428
             + K D ++ANPPFN  +W +E L +D RW +G PP+GNAN+AW++HMI  L+P+G  ++
Sbjct  261  KGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGF  320

Query  429  LLANGSMSSQTSGEGDIRKNIVQADLVEAMIALPNQLFTNTQIPACIWIINKAKA-----  483
            +LANGSMS+   +E +IRKN+++ DLVE +++LP QLF +TQIP C+W+I++ K+     
Sbjct  321  VLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKK  380

Query  484  -RKGEVLFINATQIGYLKDRVLRDFTADDIAKISDTYHNWQKQNG--YENIPAFCYCATL  540
             RK E+LFI+A +IG +  R L++F+ +DI K+++TYH+W+  N+  YE+I++FC    L
Sbjct  381  ERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGTNDKYYEDIAGFCKVVNL  440

Query  541  DEIAKNDFVLTAGRYVGAVQEENDGVPFAEKMQELTALLNEQFKQGRELEQQIAENLKGL  600
            +E+ +N+++LT+GRYVG  + E+D  PF +KM+ +T+ L+EQF +++ELE+QI  +L GL
Sbjct  441  EEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

Query  601  GYGI  604
            GYG+
Sbjct  501  GYGV  504

281) Aflv_2059 in NC_011567


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  414 bits (1559),  Expect = 6e-117, Method: Compositional matrix adjust.
 Identities = 241/516 (47%), Positives = 372/516 (73%), Gaps = 23/516 (4%)

Query  5    ADIDFQKDLFEAANKMRGSVAPADYKHYVLPLIFLRYLSNKYEQRRKELEQIVKDPSSDW  64
            A I+F+  L +AA+K+RGS+ +A+YK+  L LIFL+Y+S+ +E++ KEL Q   DP    
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQ---DP----  54

Query  65   YTEDDEMRQIIITDPDQYKAENVFVVPEEASWSYIMKNAKQPNIKEILDNAMKRLEEENP  124
            Y++++        D D+Y AEN+F VP EA W YI  NAK+P+I +++D+AM  +E EN 
Sbjct  55   YADEE--------DQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENE  106

Query  125  ELEGILPRIYQGSNLPAENVAGLIEIFSRDVFSANTHESVDILGRTYEYFISSFAASEGN  184
             L G+LP+ Y  + L  E+++++I++F+  +  ++++   D+LGR YEYFI+ FA++EG+
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLFTFKLGDTESRKQ-DVLGRVYEYFIAKFASAEGK  165

Query  185  RGGEFFTPSSIVKLLVAMLEPKSGIVFDPACGSGGMFIQSEEYAPNKHA----LSFYGQE  240
             +GEF+TPSSIVKLLV M+EP  G ++DP CGSGGMF+QSE +  + ++    +++YGQE
Sbjct  166  NAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQE  225

Query  241  NVVTTVRLGKMNVLLHGINAEI--RLGDSLLNDQFPDLKADYIIANPPFNQKDWGADRLS  298
            +  TT +L+KMN+ ++GI+ ++  R +D++ ND   +LKADYI+ANPPFN  DWG +RL 
Sbjct  226  SNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLL  285

Query  299  KNDPRLIGPVTNSNANYMWMQHFLYHLNDTGTAGFVMANGAMTTNVKEEKEVRQKLVDEG  358
             +  + +G   ++NANY W++H +  L   GTAGFV+ANG+M+T+ K+E E+R++L++++
Sbjct  286  DDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQD  345

Query  359  YIDCIVQLPEKLFFTTGIPCCLFFLSKNRDGKNGYRARKNEILFIDARKMGTLVSRKQKA  418
             ++CIV LP +LF++T IP CL F+S+N+ G+NG + RKNEILFIDAR +G +VSR  K 
Sbjct  346  LVECIVTLPGQLFYSTQIPVCLWFISNNK-GQNGKKERKNEILFIDAREIGHMVSRTLKE  404

Query  419  LSKEEIDKIAAVYHAYKYEEAEGYEDVTGFCKVATIEEVQANDYKLTPGIYVGTEVSDED  478
            +S E+I+K+A  YH+ +  +   YED++GFCKV  +EEV+ N+Y LTPG YVG    +ED
Sbjct  405  FSDEDIQKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEED  464

Query  479  DTPFEEKMAELTQRLLEQFEESNRLQEKIKRDLEGL  514
            + PFE+KM  +T  L EQF  S+ L+++I++ LEGL
Sbjct  465  EEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

282) GHH_c13080 in NC_020210


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  414 bits (1558),  Expect = 8e-117, Method: Compositional matrix adjust.
 Identities = 241/516 (47%), Positives = 369/516 (72%), Gaps = 23/516 (4%)

Query  5    ADIDFQKDLFEAANKMRGSVAPADYKHYVLPLIFLRYLSNKYEQRRKELEQIVKDPSSDW  64
            A I+F+  L +AA+K+RGS+ +A+YK+  L LIFL+Y+S+ +E++ KEL Q   DP    
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQ---DP----  54

Query  65   YTEDDEMRQVIITDPDQYKAENVFVVPEEASWSYIMKNAKQPNIKEILDNAMKRLEEENP  124
            Y++++        D D+Y AEN+F VP EA W YI  NAK+P+I +++D+AM  +E EN 
Sbjct  55   YADEE--------DQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENE  106

Query  125  ELEGILPRIYQGSNLPPENVAGLIEIFSRDVFSANTDDSVDILGRTYEYFISSFAASEGN  184
             L G+LP+ Y  + L  E+++++I++F+  + +       D+LGR YEYFI+ FA++EG+
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLFTFKL-GDTESRKQDVLGRVYEYFIAKFASAEGK  165

Query  185  RGGEFFTPSSIVKLLVAMLEPKSGIVFDPACGSGGMFIQSEEYAPNKHA----LSFYGQE  240
             +GEF+TPSSIVKLLV M+EP  G ++DP CGSGGMF+QSE +  + ++    +++YGQE
Sbjct  166  NAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQE  225

Query  241  NVVTTVRLGKMNVLLHGINAEI--RLGDSLLNDQFPDLKADYVIANPPFNQKDWGADRLS  298
            +  TT +L+KMN+ ++GI+ ++  R +D++ ND   +LKADY++ANPPFN  DWG +RL 
Sbjct  226  SNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLL  285

Query  299  KNDPRLIGPVTNSNANYMWMQHFLYHLNDTGTAGFVMANGAMTTNVKEEKEVRQKLVDEG  358
             +  + +G   ++NANY W++H +  L   GTAGFV+ANG+M+T+ K+E E+R++L++++
Sbjct  286  DDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQD  345

Query  359  YIDCIVQLPEKLFFTTGIPCCLFFLSKNRDGKNGYRARKNEILFIDARKMGTLVSRKQKA  418
             ++CIV LP +LF++T IP CL F+S+N+ G+NG + RKNEILFIDAR +G +VSR  K 
Sbjct  346  LVECIVTLPGQLFYSTQIPVCLWFISNNK-GQNGKKERKNEILFIDAREIGHMVSRTLKE  404

Query  419  LSKEEIDKIAAVYHAYKYEEAEQYEDVAGFCKVATIDEVRANDYKLTPGIYVGTEVSNED  478
            +S E+I+K+A  YH+ +  +   YED+AGFCKV  ++EV+ N+Y LTPG YVG    +ED
Sbjct  405  FSDEDIQKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEED  464

Query  479  DVPFEEKMAELTQRLLEQFEESNRLQEKIKKDLEGL  514
            + PFE+KM  +T  L EQF  S+ L+++I+K LEGL
Sbjct  465  EEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

283) hsdM in NC_010612


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  414 bits (1557),  Expect = 9e-117, Method: Compositional matrix adjust.
 Identities = 233/502 (47%), Positives = 356/502 (71%), Gaps = 40/502 (7%)

Query  9    LKDTLWKGAEKLRGSIPASQYKDVILGLVFLKFVSDARDGR------KPFV---------  53
            + + LW++A+KLRGS+ A++YK+V LGL+FLK+VSD+ + +       P+          
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDEYL  65

Query  54   ------VPPEARWEALAGNAKSPDIGQLIDTAMLSVMTANPSLAATLPQLYHK--VDQRR  105
                  VP EARW+ + +NAK P+IGQLID AM+++   N SL + LP+ Y +  +D+ +
Sbjct  66   AENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEK  125

Query  106  LGELVEVLGAARFS-GRPSHRARDLMGEVYEYFLGNFARAEGRRGGEFFTPPSVVRVIVE  164
            LG++++++    F  G    R +D++G VYEYF+++FA AEG+ +GEF+TP+S+V+++VE
Sbjct  126  LGDIIDLFT---FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVE  182

Query  165  ILEPSSGRIYDPCCGSGGMFVQTERFICAHDGDPAQISIYGQESVEQTWRMAKMNLAVHG  224
            ++EP  GRIYDPCCGSGGMFVQ+ERF+  H+G   +I+IYGQES   TW++AKMNLA++G
Sbjct  183  MIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRG  242

Query  225  IDDAGLGARWGDTFATDQHDGVPMDYVMANPPFNIKDWARDE--QDPRWRFGTPPAANAN  282
            ID+ +LG R +DTF  D H G+  DY++ANPPFN  DW+++   +D RW+FG PP +NAN
Sbjct  243  IDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNAN  301

Query  283  FAWIQHILSKLAPTGQAGVVMANGSMSSKTNGEDRIRAGIIDADLVSCMVALPTQLFRST  342
            +AWI+H++SKLAP G AG V+ANGSMS+  ++E  IR  +I+ DLV C+V+LP QLF ST
Sbjct  302  YAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYST  361

Query  343  GIPVCLWFFAKD-----KKARSGQVLFIDARGLGSMVDRCERTLTDDDVARIGDTYHGWF  397
             IPVCLWF++++     KK R  ++LFIDAR +G MV R  + ++D+D+ ++++TYH+W 
Sbjct  362  QIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWR  421

Query  398  GSASSVAKGTVYQDIPGFCRSASLDEIRAEGYVLTPGRYVGTGASCADGEPIGDKlarlt  457
            G+     ++  Y+DI+GFC+  +L+E++ + Y+LTPGRYVG +    D EP+ +K+ R+T
Sbjct  422  GT-----NDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRIT  476

Query  458  tqllaalDESTKLDEAVRAQLG  479
            ++L   +  S  L++ +R  L 
Sbjct  477  SELSEQFAKSKELEDQIRKSLE  498

284) Belba_2142 in NC_018010


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  412 bits (1550),  Expect = 3e-116, Method: Compositional matrix adjust.
 Identities = 243/513 (48%), Positives = 366/513 (72%), Gaps = 23/513 (4%)

Query  14   EVTLWEAANKLRGSVEPAEYKHVVLSLIFLKFASDKFEAHRAKLIAEGKEKYIEM--PAF  71
            E  LW+AA+KLRGS+++AEYK+V L+LIFLK+ SD FE     L    ++ Y +      
Sbjct  7    EEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKEL---KQDPYADEEDQDE  63

Query  72   YNQNNVFFLEESSRWNFLIKKSKQNDIALLIDTALHTIEKNNKSLKGALPDNYFSRLGLD  131
            Y  +N+F +   +RW+++  ++K+ +I+ LID A+ +IEK+N SLKG LP +Y +R +LD
Sbjct  64   YLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-ARPALD  122

Query  132  VTKLASLLDTIN-DIDTNKDPKQDLVGKVYEYFLSKFALAEGKGKGEFYTPKSIVNLIAE  190
              KL+ ++D +   ++     KQD++G+VYEYF++KFA AEGK  GEFYTP SIV+L+ E
Sbjct  123  KEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVE  182

Query  191  MIEPYKGIIYDPACGSGGMFVQSIKFIEAHHGNKKEISIYGQEYTNTTYKLAKMNLAIRG  250
            MIEPYKG IYDP CGSGGMFVQS +F+E H+G   +I+IYGQE   TT KLAKMNLAIRG
Sbjct  183  MIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRG  242

Query  251  ISGNLGEKAADTFGDDQHKDLKADFIMANPPFNQKDWRASNELTDDPRWMGYDVPPKSNA  310
            I  +LGE+ ADTF +D HK+LKAD+I+ANPPFN  DW + + L DD RW  ++VPPK+NA
Sbjct  243  IDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYRWQ-FGVPPKGNA  300

Query  311  NYGWILNMVSKLSDNGIAGFILANGALSGGG-EEYKIRRKLIENNLVEAILVLPRNLFYT  369
            NY+WI +M+SKL+ NG AGF+LANG++S +G +E  IR++LIE++LVE I+ LP +LFY+
Sbjct  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360

Query  370  TDISVTLWILNKNKKDQTRKIGDETRNYRDRENEILFMDLRQMGEPFEKKYTQFSDDDIQ  429
            T+I+V LW++++NK ++ +K         +R NEILF+D R++G+   +   +FSD+DIQ
Sbjct  361  TQIPVCLWFISNNKGQNGKK---------ERKNEILFIDAREIGHMVSRTLKEFSDEDIQ  411

Query  430  KVVNTYHQWQVEE---IENVPEFCYAATLEEVEKKDFSLVPSKYIEFVNRDENID-FDDK  485
            KV +TYH W+  +    E+++ FC    LEEV ++++ L P++Y+ + + +E+ + F++K
Sbjct  412  KVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQK  471

Query  486  MNALKTEFTELLKAEAQSKNDLLTVFKELGYEI  518
            M+ + +E++E +    +  +++   +  LGY +
Sbjct  472  MKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

285) F382_03170 in NC_021743


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  411 bits (1545),  Expect = 1e-115, Method: Compositional matrix adjust.
 Identities = 251/544 (47%), Positives = 380/544 (70%), Gaps = 56/544 (10%)

Query  101  LDQTLWTAADKLRKNLDAANYKHIVLGFIFLKYISDSFTDFQAKLKTQLTTPESELYLDP  160
            +++ LW AADKLR ++DAA+YK++ LG+IFLKY+SDSF   + K K           L  
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSF---EEKYKE----------LKQ  52

Query  161  ALFDEQEFSQILAEELEQRDYYAAENIFWVPEQARWDNIKSLSKLNLGDELPWGDKFKGV  220
              + ++E          ++D Y AENIFWVP +ARW+ I+  +K               +
Sbjct  53   DPYADEE----------DQDEYLAENIFWVPKEARWQYINDNAKKP------------EI  90

Query  221  SRLIDDAFEAIERENPKLKGVLQRIAGFGVPD---EMLTGLIDLFSRTNFTQPMHNGEPV  277
            ++LID A  AIE+EN  LKGVL +   ++ P    E L ++IDLF+   F   + + E+ 
Sbjct  91   GQLIDKAMIAIEKENESLKGVLPK--EYARPALDKEKLGDIIDLFT---FK--LGDTES-  142

Query  278  HLQAKDILGHVYEYFLGQFALAEGKKGGQYFTPKSIVTLIVEMLEPYSGRIYDPAMGSGG  337
              + +D+LG+VYEYF+++FA AEGK++G+++TP SIV L+VEM+EPY GRIYDP  GSGG
Sbjct  143  --RKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGG  200

Query  338  FFVQADRFIQAHAGNRNAISVYGQESNSTTRKLAVMNMAIRGIPFDFGDKPEDTLLNPLH  397
             FVQ++RF++ H G  + I++YGQESN+TT+KLA MN+AIRGI  D+G++  DT+ N LH
Sbjct  201  MFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLH  260

Query  398  IDKKMDVVMANPPFNQKEWWNESLANDPRWAYGTPPQGNANFAWLQHMIYHLSPKGKMAL  457
             + K D ++ANPPFN  +W +E L +D RW +G PP+GNAN+AW++HMI  L+P+G  ++
Sbjct  261  KGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGF  320

Query  458  LLANGSMSSQTSGEGDIRKNIVQADLVEAMIALPNQLFTNTQIPACIWIINKAKA-----  512
            +LANGSMS+   +E +IRKN+++ DLVE +++LP QLF +TQIP C+W+I++ K+     
Sbjct  321  VLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKK  380

Query  513  -RKGEVLFINATQIGYLKDRVLRDFTADDIAKISDTYHNWQKQNG--YENIPAFCYCATL  569
             RK E+LFI+A +IG +  R L++F+ +DI K+++TYH+W+  N+  YE+I++FC    L
Sbjct  381  ERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGTNDKYYEDIAGFCKVVNL  440

Query  570  DEIAKNDFVLTAGRYVGAVQEENDGVPFAEKMQELTALLNEQFKQGRELEQQIAENLKGL  629
            +E+ +N+++LT+GRYVG  + E+D  PF +KM+ +T+ L+EQF +++ELE+QI  +L GL
Sbjct  441  EEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

Query  630  GYGI  633
            GYG+
Sbjct  501  GYGV  504

286) hsdM in NC_020133


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  411 bits (1546),  Expect = 6e-116, Method: Compositional matrix adjust.
 Identities = 231/502 (47%), Positives = 356/502 (71%), Gaps = 40/502 (7%)

Query  9    LKDTLWKGAEKLRGSIPASQYKDVILGLVFLKFVSDARDGR------KPFV---------  53
            + + LW++A+KLRGS+ A++YK+V LGL+FLK+VSD+ + +       P+          
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDEYL  65

Query  54   ------VPPEARWEALAGNAKSPDIGQLIDTAMLSVMTANPSLAATLPQLYHK--VDQRR  105
                  VP EARW+ + +NAK P+IGQLID AM+++   N SL + LP+ Y +  +D+ +
Sbjct  66   AENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEK  125

Query  106  LGELVEVLGAARFS-GRPSHRARDLMGEVYEYFLGNFARAEGRRGGEFFTPPSVVRVIVE  164
            LG++++++    F  G    R +D++G VYEYF+++FA AEG+ +GEF+TP+S+V+++VE
Sbjct  126  LGDIIDLFT---FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVE  182

Query  165  ILEPSSGRIYDPCCGSGGMFVQTERFICAHDGDPAQISIYGQESVEQTWRMAKLNLAVHG  224
            ++EP  GRIYDPCCGSGGMFVQ+ERF+  H+G   +I+IYGQES   TW++AK+NLA++G
Sbjct  183  MIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRG  242

Query  225  IDDAGLGARWGDTFATDQHDGVPMDYVMANPPFNIKDWARDE--QDPRWRFGTPPAANAN  282
            ID+ +LG R +DTF  D H G+  DY++ANPPFN  DW+++   +D RW+FG PP +NAN
Sbjct  243  IDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNAN  301

Query  283  FAWIQHILSKLAPTGQAGVVMANGSMSSKTNGEDRIRAGIIDADLVSCMVALPTQLFRST  342
            +AWI+H++SKLAP G AG V+ANGSMS+  ++E  IR  +I+ DLV C+V+LP QLF ST
Sbjct  302  YAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYST  361

Query  343  GIPVCLWFFAKD-----KKARSGQVLFIDARGLGSMLDRCERTLTDDDVARIGDTYHGWF  397
             IPVCLWF++++     KK R  ++LFIDAR +G M+ R  + ++D+D+ ++++TYH+W 
Sbjct  362  QIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWR  421

Query  398  GSASAVAKGAVYQDIPGFCRSASLDEIRAEGYVLTPGRYVGTGASCADGEPIGDKltrlt  457
            G+     ++  Y+DI+GFC+  +L+E++ + Y+LTPGRYVG +    D EP+ +K+ R+T
Sbjct  422  GT-----NDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRIT  476

Query  458  tqllaalDESTKLDEAVRAQLG  479
            ++L   +  S  L++ +R  L 
Sbjct  477  SELSEQFAKSKELEDQIRKSLE  498

287) Belba_0101 in NC_018010


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  410 bits (1544),  Expect = 1e-115, Method: Compositional matrix adjust.
 Identities = 249/516 (49%), Positives = 369/516 (72%), Gaps = 19/516 (3%)

Query  10   AIEETLWQSCDKLRGSVEPAEYKHVVLGLIFLKFASDKFEQRRKELIAEGKEKYVEMKDF  69
            ++EE LWQ+ DKLRGS+++AEYK+V LGLIFLK+ SD FE++ KEL  +      +  ++
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDEY  64

Query  70   YAMKNVFYLEEISRWSYIIKNAKQNDISLKIDTALNTIEKNNPALKGALPDNYFSRLALD  129
             A  N+F +   +RW YI  NAK+ +I+  ID A+ +IEK+N +LKG LP +Y +R ALD
Sbjct  65   LA-ENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-ARPALD  122

Query  130  KTKLASLLDTIN-DIDTLKDNGQDVIGRVYEYFLGKFALKESSGKGKGEFYTPKTIVNLM  188
            K KL+ ++D +   ++      QDV+GRVYEYF++KFA   + GK  GEFYTP +IV+L+
Sbjct  123  KEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFA--SAEGKNAGEFYTPSSIVKLL  180

Query  189  AELIEPYKGIIYDPCCGTGGMFVQSIKFIEAHQGSKKEVSIYGQENTPTTYKLAKMNLAI  248
             E+IEPYKG IYDPCCG+GGMFVQS +F+E HQG   +++IYGQE+ PTT KLAKMNLAI
Sbjct  181  VEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI  240

Query  249  RGIAANLGDKHADTFSNDQHKDLKADYIMANPPFNLKDWRGENELLDDPRWMGYEVPPKS  308
            RGI  +LG+++ADTF ND HK+LKADYI+ANPPFN  DW G++ LLDD RW  + VPPK+
Sbjct  241  RGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYRWQ-FGVPPKG  298

Query  309  NANYGWILNMVSKLSENGVAGFILANGALSGSG-EEYKIRRKLIENDLVEAIIIIPRNTF  367
            NANY+WI +M+SKL+ NG AGF+LANG++S SG +E  IR++LIE+DLVE I+ +P + F
Sbjct  299  NANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLF  358

Query  368  YTTDISVTLWILNKNKNQRTDNTKEKPKNYRDRTGEILFMDLRRWGSEYEKKYIELTEDD  427
            Y+T+I+V LW++++NK Q            ++R  EILF+D R  G    +   E++++D
Sbjct  359  YSTQIPVCLWFISNNKGQNGK---------KERKNEILFIDAREIGHMVSRTLKEFSDED  409

Query  428  IQQVALNFHNWQQADYETTYKDIPEYCKSASFEDLEANDFSLVPSKYIEFVDKDSGID-F  486
            IQ+VA  +H+W+ ++ +  Y DI+ +CK  ++E++  N++ L P++Y+ + D + + + F
Sbjct  410  IQKVAQTYHSWRGTN-DKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPF  468

Query  487  DTEMKRIQQDFKTllqeekesqeqlINAFKTLGYSL  522
            +  MKRI  ++   +   KE ++Q+ +++  LGY++
Sbjct  469  EQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

288) Fphi_0190 in NC_010336


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  410 bits (1541),  Expect = 2e-115, Method: Compositional matrix adjust.
 Identities = 254/524 (49%), Positives = 375/524 (72%), Gaps = 24/524 (4%)

Query  9    NTKSMEETLWDSANKLRGSVESSEYKHIVLGLIFLKFVSDTFEERREQLIAEGKEAFIDM  68
             T + EE LW++A+KLRGS++++EYK++ LGLIFLK+VSD+FEE+  +L  +      D 
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ  61

Query  69   VEFYTMENVFYLPEESRWSYIKQNAKQDDIALKIDTALSTIEKNNPSLKGALPDNYFSRL  128
             E Y  EN+F +P E+RW YI++NAK+ +I+  ID A+ +IEK+N SLKG LP +Y +R 
Sbjct  62   DE-YLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-ARP  119

Query  129  GLDVSKLSSLIDtinnintiAD-KGNDIVGRVYEYFLSKFAIAEGKGKGEFYTPKSIVNL  187
            +LD  KL+ +ID +      ++ + +D++GRVYEYF++KFA AEGK  GEFYTP SIV+L
Sbjct  120  ALDKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKL  179

Query  188  IANMIEPYKGKIYDPACGSGGMFVQSIKFIEAHKGNKKDISIYGQEYTGTTYKLAKMNLA  247
            + +MIEPYKG+IYDP CGSGGMFVQS +F+E H+G   DI+IYGQE   TT KLAKMNLA
Sbjct  180  LVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLA  239

Query  248  ICGISANLGDVPADTFFKDQHPDLKADFIMANPPFNQKDWRGVNELLDDPRWAGYDVPPK  307
            I GI  +LG+  ADTF +D H +LKAD+I+ANPPFN  DW G + LLDD RW  ++VPPK
Sbjct  240  IRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYRWQ-FGVPPK  297

Query  308  SNANYGWILNIVSKLSQNGVAGFILANGALSGGG-EEYKIRKKLIENDLVEAILILPQNM  366
            +NANY+WI +++SKL+ NG AGF+LANG++S +G +E  IRK+LIE+DLVE I+ LP ++
Sbjct  298  GNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQL  357

Query  367  FYTTNISVTIWILNANKKQREFEQNGKQKNHRDRTKEILFMDLRQKGVPFEKKFIQFDEK  426
            FY+T+I+V +W+++ NK      QNGK    ++R +EILF+D R+ G    + + +F + 
Sbjct  358  FYSTQIPVCLWFISNNK-----GQNGK----KERKNEILFIDAREIGHMVSRTLKEFSDE  408

Query  427  NIQEISNTYHTWQSIGGHSKIDSESQGYKDIPEYCKSVTLDEVIAKDYSLVPSKYIEFVN  486
            +IQ +++TYH+W+  G + K       Y DI+ +CK V L+EV  ++Y L P++Y+ + +
Sbjct  409  DIQKVAQTYHSWR--GTNDKY------YEDIAGFCKVVNLEEVKNNEYILTPGRYVGLAD  460

Query  487  RDENID-FDEKMKNLQTEFRellkqeeqskkellkVFKELGYEI  529
             +E+ + F++KMK + +E+ E + +  +   ++ K +  LGY +
Sbjct  461  VEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

289) RBAM_007140 in NC_009725


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  408 bits (1537),  Expect = 3e-115, Method: Compositional matrix adjust.
 Identities = 254/514 (50%), Positives = 373/514 (73%), Gaps = 21/514 (4%)

Query  13   EETLWDSANKLRGSVEASEYKHVVLGLIFLKFASDKFEERKAELLDEGKEKYVDMVEF--  70
            EE LW++A+KLRGS++A+EYK+V LGLIFLK+ SD FEE+  EL ++    Y D  +   
Sbjct  7    EEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDP---YADEEDQDE  63

Query  71   YTMKNVFYLSETSRWSYLVENAKQEDIALKIDTALFTVEKNNPALKGALPDNYYSRLNLD  130
            Y   N+F ++  +RW Y+ +NAK+ +I+  ID A++++EK+N +LKG LP +Y +R  LD
Sbjct  64   YLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-ARPALD  122

Query  131  VSKLASLidtin-nintikdkqqDIVGRIYEYFLSKFALAEGKGKGEFYTPKSIVNLIAE  189
              KL+ +ID +  ++     ++QD++GR+YEYF++KFA AEGK  GEFYTP SIV+L+ E
Sbjct  123  KEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVE  182

Query  190  MLEPYKGKIYDPACGSGGMFVQSVKFIESHQGNKKDISIYGQEYTTTTYKLAKMNLAIRG  249
            M+EPYKG+IYDP CGSGGMFVQS +F+E HQG   DI+IYGQE   TT KLAKMNLAIRG
Sbjct  183  MIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRG  242

Query  250  ISANLGETAADTFFNDQHKDLKADFIMANPPFNQKQWRAENELTDDPRWAGYEVPPRGNA  309
            I  +LGE  ADTF ND HK+LKAD+I+ANPPFN  +W +++ L DD RW  + VPP+GNA
Sbjct  243  IDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYRWQ-FGVPPKGNA  300

Query  310  NYAWILNIVSKLSENGVAGFLLANGALSGGG-DEYKIRKKLIENDLVESIIVLPQNMFYT  368
            NYAWI +++SKL+ NG AGF+LANG++S +G DE  IRK+LIE+DLVE I+ LP ++FY+
Sbjct  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360

Query  369  TNISVTLWILNKNKKARTIDQNGSLKKYRNREKEVLFMDLREMGVPFEKKYTQFSEDDIT  428
            T+I+V LW++++NK     +QNG     ++R +E+LF+D RE+G    +   +FS++DI 
Sbjct  361  TQIPVCLWFISNNK-----GQNGK----KERKNEILFIDAREIGHMVSRTLKEFSDEDIQ  411

Query  429  KVTNIYHNWQQTDYETKYQNIPEFSYSATFEEVVNKDFSLVPSKYIEFANRDEDID-FDE  487
            KV++ YH+W+ T+ +  Y++I+ F     +EEV N+++ L P++Y+ +A+ +ED + F++
Sbjct  412  KVAQTYHSWRGTN-DKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQ  470

Query  488  KMKLIQSEFVDLLKAEEDSKKDLLKVFKELGYEI  521
            KMK I SE+ + +    +   ++ K +  LGY +
Sbjct  471  KMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

290) RTO_30870 in NC_021015


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  408 bits (1535),  Expect = 5e-115, Method: Compositional matrix adjust.
 Identities = 248/517 (48%), Positives = 365/517 (71%), Gaps = 22/517 (4%)

Query  11   ISMEEALWKSADKLRGSVEPAEYKHVVLSLFFLKFASDKFEECRNKIIATHGEKYADMKP  70
            I+ EE LW++ADKLRGS+++AEYK+V L+L+FLK+ SD FEE   K      + YAD   
Sbjct  4    IGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEE---KYKELKQDPYADEED  60

Query  71   F--YTQENVFYLPEESRWKYIIENAKQDDIALKIDTALYTIEKNNPALKGALPDNYYSRL  128
               Y  EN+F +P E+RW+YI +NAK+ +I+  ID A+ +IEK+N +LKG LP +Y +R 
Sbjct  61   QDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-ARP  119

Query  129  HIDTAKLASLLD--EINRINTDDKENDIIGRVYEYFLSKFALAEGKGKGEFYTPKCIVNL  186
             +D  KL+ ++D   ++  +T+ + +D++GRVYEYF++KFA AEGK  GEFYTP  IV+L
Sbjct  120  ALDKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKL  179

Query  187  IAEMLEPYDGILYDPCCGSGGMFVQSIKFVEAHSGNKKKVSIYGQEYTNTTFKLAKMNLA  246
            + EM+EPY G +YDPCCGSGGMFVQS +FVE H G    ++IYGQE   TT KLAKMNLA
Sbjct  180  LVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLA  239

Query  247  IRGISANLGEMAANTFTNDQHKDLKADFIMANPPFNQKQWRAENELVDDPRWNGYEVPPT  306
            IRGI  +LGE  A+TF ND HK+LKAD+I+ANPPFN  +W +++ L+DD RW+ + VPP 
Sbjct  240  IRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYRWQ-FGVPPK  297

Query  307  SNANYGWILNIVSKLSRNGVAGFLLANGALSDDGT-ELKIRQQLIENHLVEAIIILPRNL  365
            +NANY+WI +++SKL+ NG AGF+LANG++S  G  EL IR++LIE++LVE I+ LP +L
Sbjct  298  GNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQL  357

Query  366  FYTTDISVTLWVLNKNKKARVVEQNGKLKRYRDREDEILFMDLRQMGSPYEKKYIELTEE  425
            FY+T+I+V LW +++NK      QNGK    ++R +EILF+D R++G    +   E+++E
Sbjct  358  FYSTQIPVCLWFISNNK-----GQNGK----KERKNEILFIDAREIGHMVSRTLKEFSDE  408

Query  426  DRAKVTSVYHNWQQEGYEETYENVPEFCYSASFEEVKEKGFTLVPSRYIEFVNRDENID-  484
            D  KV+  YH+W+    +  YE+++ FC   ++EEVK++ + L P+RY+ + + +E+ + 
Sbjct  409  DIQKVAQTYHSWRGTN-DKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEP  467

Query  485  FDTKMKSLQGELKELLVQEEKSKSDLLAVFKELGYEI  521
            F+ KMK + +EL E + +      ++   +  LGY +
Sbjct  468  FEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

291) EUS_01180 in NC_021011


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  408 bits (1534),  Expect = 6e-115, Method: Compositional matrix adjust.
 Identities = 240/513 (47%), Positives = 362/513 (71%), Gaps = 20/513 (3%)

Query  2    EEALWKSADKLRGSVEPAEYKHVVLSLFFLKFAGDKFDAQ-REMIAKQYGEKFVDTVAFY  60
            EE LW++ADKLRGS+++AEYK+V L+L+FLK+ +D F+ + +E+    Y++   +    Y
Sbjct  7    EEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADE--EDQDEY  64

Query  61   TKDNVFYLPPESRWSYIMENAKQDDIALKIDTALYTIEKNNPALKGALPDNYYSRLQLDT  120
              +N+F +P E+RW YI +NAK+ +I+  ID A+ +IEK+N +LKG LP +Y +R  LD 
Sbjct  65   LAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-ARPALDK  123

Query  121  AKLASLLD--EINRINTDDKENDIIGRIYEYFLSKFALAEGKGKGEFYTPKCIVNLIAEM  178
             KL+ ++D   ++  +T+ + +D++GR+YEYF++KFA AEGK  GEFYTP  IV+L+ EM
Sbjct  124  EKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEM  183

Query  179  LEPYDGILYDPCCGSGGMFVQSMKFVEAHHGNKKQVSIYGQEYTNTTYKLCKMNLAIRGI  238
            +EPY G +YDPCCGSGGMFVQS +FVE H+G   +++IYGQE   TT KL KMNLAIRGI
Sbjct  184  IEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGI  243

Query  239  SANLGETAANTFTNDQHKDLKADYIMANPPFNQKAWRAENELIDDPRWDGYEVPPTSNAN  298
              +LGE  A+TF ND HK+LKADYI+ANPPFN   W +++ L+DD RW+ + VPP +NAN
Sbjct  244  DNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYRWQ-FGVPPKGNAN  301

Query  299  YGWILNIVSKLSQNGVAGFLLANGALSDDGT-ELKIRKQLIENNLVEAIIILPRNLFYTT  357
            Y+WI +++SKL+ NG AGF+LANG++S  G  EL IRK+LIE++LVE I+ LP +LFY+T
Sbjct  302  YAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYST  361

Query  358  DISVTLWILNKNKKARVVEQNGQLKRYRDREREILFMDLRQMGGPYEKKYIELTDKDRAK  417
            +I+V LW++++NK      QNG+    ++R  EILF+D R++G    +   E++D D  K
Sbjct  362  QIPVCLWFISNNK-----GQNGK----KERKNEILFIDAREIGHMVSRTLKEFSDEDIQK  412

Query  418  VTSVYHNWQQEGYEETYENIPEFCYSASFVEVAEKGFTLVPSRYIEFVNRDENID-FDAK  476
            V+  YH+W+    +  YE+I+ FC   ++ EV ++ + L P+RY+ + + +E+ + F+ K
Sbjct  413  VAQTYHSWRGTN-DKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQK  471

Query  477  MKTLQAELKELLVQEEQSKADLLAVFKELGYEI  509
            MK + +EL E + +  +   ++   +  LGY +
Sbjct  472  MKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

292) Geoth_2026 in NC_015660


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  408 bits (1534),  Expect = 6e-115, Method: Compositional matrix adjust.
 Identities = 238/516 (47%), Positives = 365/516 (71%), Gaps = 23/516 (4%)

Query  5    ADIDFQKDLFEAANKMRGSVAPADYKHYVLPLIFLRYLSNKYEKRRKELEQIVKDPSSDW  64
            A I+F+  L +AA+K+RGS+ +A+YK+  L LIFL+Y+S+ +E + KEL Q   DP    
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQ---DP----  54

Query  65   YTEDDEMRQIIITDPDQYKAENVFVVPEEASWSYIMKNAKQPNIKEILDNAMKRLEEENP  124
            Y++++        D D+Y AEN+F VP EA W YI  NAK+P+I +++D+AM  +E EN 
Sbjct  55   YADEE--------DQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENE  106

Query  125  ELEGILPRIYQGSNLPPENVAGLIEIFSRDVFSANTDDSVDILGRTYEYFISSFAASEGN  184
             L G+LP+ Y  + L  E+++++I++F+  + +       D+LGR YEYFI+ FA++EG+
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLFTFKL-GDTESRKQDVLGRVYEYFIAKFASAEGK  165

Query  185  RGGEFFTPSSIVKLLVAMLEPKSGIVFDPACGSGGMFIQSEEYAPNKHA----LSFYGQE  240
             +GEF+TPSSIVKLLV M+EP  G ++DP CGSGGMF+QSE +  + ++    +++YGQE
Sbjct  166  NAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQE  225

Query  241  NVVTTVRLGKMNVLLHGINAEI--RLGDSLLNDQFPDLKADYVIANPPFNQKDWGADRLS  298
            +  TT +L+KMN+ ++GI+ ++  R +D++ ND   +LKADY++ANPPFN  DWG +RL 
Sbjct  226  SNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLL  285

Query  299  KNDPRLIGPVTNSNANYMWMQHFLYHLNDTGTAGFVMANGAMTTNVKEEKEVRQKLVDEG  358
             +  + +G   ++NANY W++H +  L   GTAGFV+ANG+M+T+ K+E E+R++L++++
Sbjct  286  DDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQD  345

Query  359  YIDCIVQLPEKLFFTTGIPCCLFFLSKNRDGKNGYRARKNEILFIDARKMGTLVSRKQKA  418
             ++CIV LP +LF++T IP CL F+S+N+ G+NG + RKNEILFIDAR +G +VSR  K 
Sbjct  346  LVECIVTLPGQLFYSTQIPVCLWFISNNK-GQNGKKERKNEILFIDAREIGHMVSRTLKE  404

Query  419  LSKEEIDKIAAVYRAYKYEGAEGYEDVVGFCKVATIDEVRANDYKLTPGIYVGTEVSDED  478
            +S E+I+K+A  Y++ +      YED+ GFCKV  ++EV+ N+Y LTPG YVG    +ED
Sbjct  405  FSDEDIQKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEED  464

Query  479  DIPFEEKMAELTQRLLEQFEESNRLQEKIKKDLEEL  514
            + PFE+KM  +T  L EQF  S+ L+++I+K LE L
Sbjct  465  EEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

293) ASU2_03895 in NC_018690


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  407 bits (1530),  Expect = 1e-114, Method: Compositional matrix adjust.
 Identities = 237/528 (45%), Positives = 365/528 (70%), Gaps = 46/528 (8%)

Query  2    KAADKLRQQLDAANYKHIVLGLIFLKYVSDSFTAQRERLSAQFQDPNSDYYLPDATQEEI  61
            +AADKLR  +DAA+YK++ LGLIFLKYVSDSF         ++++ + D Y  +  Q+E 
Sbjct  12   QAADKLRGSMDAAEYKNVALGLIFLKYVSDSF-------EEKYKELKQDPYADEEDQDE-  63

Query  62   ESELEERDYYTQDNVFWVPQTARWDEIKAVVRSNLGDTIFGDKTFKGVANLIDEAFDAIE  121
                     Y  +N+FWVP+ ARW+ I+   +               +++LID A  AIE
Sbjct  64   ---------YLAENIFWVPKEARWQYINDNAKKP------------EIGQLIDKAMIAIE  102

Query  122  KDNPKLKGVIQR-ISSYNVDESILIGLVELFSDTNFTRPTLNGKPVSLAAKDILGHVYEY  180
            K+N  LKGV+ +  +   +D   L ++++LF+   F     +++      +D+LG+VYEY
Sbjct  103  KENESLKGVLPKEYARPALDKEKLGDIIDLFT---FKLGDTESRK-----QDVLGRVYEY  154

Query  181  FLGQFALAEGKKGGQYFTPKSIVTLIIEMLEPYEGRIYDPAMGSGGFFVQTERFIREHQG  240
            F+++FA AEGK++G+++TP SIV L++EM+EPY GRIYDP  GSGG FVQ+ERF+  HQG
Sbjct  155  FIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQG  214

Query  241  NPNRVSIYGQEFNPTTWKLAAMNMAIHGLSFDFGKGNADTFSNPQHLDKRMDFVMANPPF  300
              + ++IYGQE NPTTWKLA MN+AI+G+  D+G  NADTF N  H + + D+++ANPPF
Sbjct  215  RLDDIAIYGQESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPF  274

Query  301  NMNEWWNQSLANDPRWKFGTPPSSNANFAWLQHMIYHLSEKGKMALLLANGSMSSNTNNE  360
            N ++W ++ L +D RW+FG PP +NAN+AW++HMI  L+ +G  +++LANGSMS++ ++E
Sbjct  275  NASDWGQERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDE  334

Query  361  GEIRRNIVRADLVEAMIALPSQLFTNTQIPACIWVLNKAKP------RKGEVLFIDARQL  414
             EIR+N++  DLVE +++LP+QLF +TQIP C+W +++ K       RK E+LFIDAR++
Sbjct  335  LEIRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREI  394

Query  415  GYMKTRVMRDFTPKDIASVAETYHQWQKGEG--YQDVPAFCKSATLAEIESHDFVLTPGR  472
            G M +R +++F+  DI  VA+TYH W+  ++  Y+D+++FCK   L E+ +++++LTPGR
Sbjct  395  GHMVSRTLKEFSDEDIQKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGR  454

Query  473  YVGTAEVEDDGIPFAEKIQNLTALLDQQFKQGAELEAKIRANLKTLGF  520
            YVG A+VE+D  PF +K++ +T+ L +QF ++ ELE +IR +L  LG+
Sbjct  455  YVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGY  502

294) GY4MC1_1947 in NC_014650


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  407 bits (1533),  Expect = 7e-115, Method: Compositional matrix adjust.
 Identities = 240/516 (47%), Positives = 366/516 (71%), Gaps = 23/516 (4%)

Query  5    ADIDFQKDLFEAANKMRGSVAPADYKHYVLPLIFLRYLSNKYEKRRKELEQIVKDPSSDW  64
            A I+F+  L +AA+K+RGS+ +A+YK+  L LIFL+Y+S+ +E + KEL Q   DP    
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQ---DP----  54

Query  65   YTEDDEMRQIIITDPDQYKAENVFVVPEEASWSYIMKNAKQPNIKEILDNAMKRLEEENP  124
            Y++++        D D+Y AEN+F VP EA W YI  NAK+P+I +++D+AM  +E EN 
Sbjct  55   YADEE--------DQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENE  106

Query  125  ELEGILPRIYQGSNLPPENVAGLIEIFSRDVFSANTDDSVDILGRTYEYFISSFAASEGN  184
             L G+LP+ Y  + L  E+++++I++F+  + +       D+LGR YEYFI+ FA++EG+
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLFTFKL-GDTESRKQDVLGRVYEYFIAKFASAEGK  165

Query  185  RGGEFFTPSSIVKLLVAMLEPKSGIVFDPACGSGGMFIQSEEYAPNKHA----LSFYGQE  240
             +GEF+TPSSIVKLLV M+EP  G ++DP CGSGGMF+QSE +  + ++    +++YGQE
Sbjct  166  NAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQE  225

Query  241  NVVTTVRLGKMNVLLHGINAEI--RLGDSLLNDQFPDLKADYVIANPPFNQKDWGADRLS  298
            +  TT +L+KMN+ ++GI+ ++  R +D++ ND   +LKADY++ANPPFN  DWG +RL 
Sbjct  226  SNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLL  285

Query  299  KNDPRLIGPVTNSNANYMWMQHFLYHLNDTGTAGFVMANGAMTTNVKEEKEVRQKLVDEG  358
             +  + +G   ++NANY W++H +  L   GTAGFV+ANG+M+T+ K+E E+R++L++++
Sbjct  286  DDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQD  345

Query  359  YIDCIVQLPEKLFFTTGIPCCLFFLSKNRDGKNGYRARKNEILFIDARKMGTLVSRKQKA  418
             ++CIV LP +LF++T IP CL F+S+N+ G+NG + RKNEILFIDAR +G +VSR  K 
Sbjct  346  LVECIVTLPGQLFYSTQIPVCLWFISNNK-GQNGKKERKNEILFIDAREIGHMVSRTLKE  404

Query  419  LSKEEIDQIAAVYRAYKYDGAEKYEDIVGFCKVAKIEEVRANDYKLTPGIYVGTEVSNED  478
            +S E+I+++A  Y++ +      YEDI GFCKV ++EEV+ N+Y LTPG YVG    +ED
Sbjct  405  FSDEDIQKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEED  464

Query  479  DVPFEEKMAELTQRLLEQFEESNRLQEKIRKDLEEL  514
            + PFE+KM  +T  L EQF  S+ L+++IRK LE L
Sbjct  465  EEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

295) hsdM1 in NC_021251


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  406 bits (1528),  Expect = 2e-114, Method: Compositional matrix adjust.
 Identities = 241/501 (49%), Positives = 363/501 (73%), Gaps = 31/501 (6%)

Query  1    MILGLVFLKYVSDAYDerreairaelaaeGMEESQIEDLIDDPEQYQGYGVFVVPVSARW  60
            + LGL+FLKYVSD+++E+            + +    D  +D ++Y +  +F VP  ARW
Sbjct  29   VALGLIFLKYVSDSFEEKYK---------ELKQDPYAD-EEDQDEYLAENIFWVPKEARW  78

Query  61   KFLAENTKGKPAVGGEPAKNIGQLIDEAMDAVMKANPTLGGTLPRLYNKDNIDQRRLGEL  120
            +++ +N+K KP        +IGQLID AM A+ K N +L G LP+ Y +  +D+ +LG++
Sbjct  79   QYINDNAK-KP--------EIGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEKLGDI  129

Query  121  IDLFNSARFSRQGEHRARDLMGEVYEYFLGNFARAEGKRGGEFFTPPSVVKVIVEVLEPS  180
            IDLF + +++ + E R +D++G VYEYF+++FA AEGK +GEF+TP+S+VK++VE++EP 
Sbjct  130  IDLF-TFKLG-DTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPY  187

Query  181  SGRVYDPCCGSGGMFVQTEKFIYEHDGDPKDVSIYGQESIEETWRMAKMNLAIHGIDNKG  240
             GR+YDPCCGSGGMFVQ+E+F+  H+G   D++IYGQES   TW++AKMNLAI+GIDN +
Sbjct  188  KGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGIDN-D  246

Query  241  LGARWSDTFARDQHPDVQMDYVMANPPFNIKDWARNE--EDPRWRFGVPPANNANYAWIQ  298
            LG R +DTF  D H +++ DY++ANPPFN  DW+++   +D RW+FGVPP  NANYAWI+
Sbjct  247  LGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWIE  306

Query  299  HILYKLAPGGRAGVVMAngsmssnsngegDIRAQIVEADLVSCMVALPTQLFRSTGIPVC  358
            H++ KLAP G AG V+ANGSMS+++++E +IR +++E DLV C+V+LP QLF ST IPVC
Sbjct  307  HMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVC  366

Query  359  LWFFAKDKAAGKQGSIDRCGQVLFIDARELGDLVDRAERALTNEEIVRIGDTFHAWRGSK  418
            LWF++++K  G++G  +R  ++LFIDARE+G++V R+ + +++E+I ++++T+H+WRG++
Sbjct  367  LWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGTN  424

Query  419  SAAVKGIMYEDVPGFCKSATLAEIKATDYALTPGRYVGTPAVEDDGEPIDEKMARLSKAL  478
                    YED++GFCK   L E+K  +Y LTPGRYVG + VE+D EP+++KM R++  L
Sbjct  425  DK-----YYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSEL  479

Query  479  LEAFDESARLERVVREQLGRL  499
             E F  S  LE  +R  L  L
Sbjct  480  SEQFAKSKELEDQIRKSLEGL  500

296) Dacet_2667 in NC_013943


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  406 bits (1527),  Expect = 2e-114, Method: Compositional matrix adjust.
 Identities = 231/512 (46%), Positives = 367/512 (72%), Gaps = 17/512 (3%)

Query  11   EEILWDSANKLRGSVEPSEYKHVVLSLIFLKFASDKFEERKKELIAEGKEKYTDMVEFYT  70
            EE LW++A+KLRGS++++EYK+V L+LIFLK+ SD FEE+ KEL  +      D  E Y 
Sbjct  7    EEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDE-YL  65

Query  71   MRNVFYLPEESRWSHIKKNSKQSNIALIVDTALSTVEKNNAALKGALPDNYFSRLGLETS  130
              N+F +P E+RW  I+ N+K+++I+ ++D A+ ++EK+N +LKG LP +Y +R +L+  
Sbjct  66   AENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-ARPALDKE  124

Query  131  KLAALIDTIS-NIDTLKDKERDIVGKVYEYFLSKFALAEGKGKGEFYTPKSIVNLIAEMI  189
            KL+ +ID ++ +++    + +D++G+VYEYF++KFA AEGK  GEFYTP SIV+L+ EMI
Sbjct  125  KLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMI  184

Query  190  EPYKGKIYDPCCGSGGMFVQSMKFIDAHKGNRKDVSIYGQELTAATYKLAKMNLAIRGIS  249
            EPYKG+IYDPCCGSGGMFVQS +F++ H+G   D++IYGQE  ++T KLAKMNLAIRGI 
Sbjct  185  EPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGID  244

Query  250  ANLGEIGKDTFLNDQFPDLKADYIMANPPFNQKDWRAGTELTSDPRWNGYETPPVGNANY  309
             +LGE   DTF ND   +LKADYI+ANPPFN  DW +   L  D RW+ +  PP GNANY
Sbjct  245  NDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYRWQ-FGVPPKGNANY  302

Query  310  GWILHMVSKLSENGVAGFILANGALSGGG-DEYKIRKKIIENNLVEAIIILPQNMFYTTN  368
            +WI HM+SKL+ NG AGF+LANG++S +G DE  IRK++IE++LVE I+ LP ++FY+T+
Sbjct  303  AWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQ  362

Query  369  ISVTLWIINKNKKERVVNIPDSTREYRSREKEVLFMDLRQEGEPFEKKYIQFHEDHIKRF  428
            I+V LW+I++NK +      ++ +E   R +E+LF+D R+ G+   +   +F +++I++ 
Sbjct  363  IPVCLWFISNNKGQ------NGKKE---RKNEILFIDAREIGHMVSRTLKEFSDEDIQKV  413

Query  429  ARTFHTWQTKQFHDEFDNVPEYCYSATFDEIKAKDFSLVPSKYIEFVNRDEDID-FDEKM  487
            A+T+H+W+  + +  +++++ +C    ++E+K +++ L P++Y+ + + +ED + F++KM
Sbjct  414  AQTYHSWRGTN-DKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKM  472

Query  488  RSLKDDFTELLKGEEKSKAELLKVFKELGYEI  519
            + +  +++E +        ++ K +  LGY +
Sbjct  473  KRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

297) LBU_1048 in NC_017469


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  406 bits (1529),  Expect = 9e-115, Method: Compositional matrix adjust.
 Identities = 231/362 (64%), Positives = 305/362 (85%), Gaps = 3/362 (0%)

Query  8    LNFEDKLWKAADALRGNMDASEYRNVVLGLIFLKYVSDAFEEKHQELLKSDFPedaedrd  67
            + FE+KLW+AAD LRG+MDA+EY+NV LGLIFLKYVSD+FEEK +EL +  ++++ ++ +
Sbjct  4    IGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDE  63

Query  68   ayeaeNIFWIPKQARWENIAGASKTQQIGEVIDQAMEAIEKENPSIQGILSKNYESPDLD  127
                 NIFW+PK+ARW+ I + +K  +IG++ID+AM AIEKEN S++G+L+K+Y  P LD
Sbjct  64   YLAE-NIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALD  122

Query  128  KSRLGKVVDLISDIDVGSKESQDRDVLGRVYEYFLQQFASAEGRGGGEFYTPRSIVKTLV  187
            K +LG ++DL++ + +G  ES+ +DVLGRVYEYF+ +FASAEG+ +GEFYTP SIVK LV
Sbjct  123  KEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLV  181

Query  188  EMIEPYKGRVYDPCCGSGGMFVQSEEFVKEHQGRIDDLAVYGEESNPTTWKLAKMNLAIR  247
            EMIEPYKGR+YDPCCGSGGMFVQSE FV  HQGR+DD+A+YG+ESNPTTWKLAKMNLAIR
Sbjct  182  EMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  248  GIDNDLGPHQGDTFANDMHKGTHFDYILANPPFNIKDWGGEKLKDDARWKYGVPPESNAN  307
            GIDNDLG +++DTF ND+HKG   DYILANPPFN  DWG E+L DD RW++GVPP +NAN
Sbjct  242  GIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNAN  301

Query  308  YAWMEHIISKLQPDGKAGFVLANGALSTSRKEELAIRKAVLEDDKIDAIVALPGANVLFN  367
            YAW+EH+ISKL P+G AGFVLANG++STS K+EL IRK ++E+D ++ IV+LPG +++++
Sbjct  302  YAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPG-QLFYS  360

Query  368  TD  369
            T+
Sbjct  361  TQ  362

298) J450_02370 in NC_021738


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  405 bits (1525),  Expect = 3e-114, Method: Compositional matrix adjust.
 Identities = 249/543 (46%), Positives = 375/543 (70%), Gaps = 56/543 (10%)

Query  21   DLDQTLWTAADKLRKNLDAANYKHIVLGFIFLKYISDSFTDFQAKLKTQLTTPESELYLD  80
            ++++ LW AADKLR ++DAA+YK++ LG+IFLKY+SDSF +   K K           L 
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEE---KYKE----------LK  51

Query  81   PALFDEQEFSQILAEELEQRDYYAAENIFWVPEQARWDNIKSLSKLNLGDELPWGDKFKG  140
               + ++E          ++D Y AENIFWVP +ARW+ I+  +K               
Sbjct  52   QDPYADEE----------DQDEYLAENIFWVPKEARWQYINDNAKKP------------E  89

Query  141  VSRLIDDAFEAIERENPKLKGVLQRIAGFGVPD---EMLTGLIDLFSRTNFTQPMHNGEP  197
            +++LID A  AIE+EN  LKGVL +   ++ P    E L ++IDLF+   F   + + E+
Sbjct  90   IGQLIDKAMIAIEKENESLKGVLPK--EYARPALDKEKLGDIIDLFT---FK--LGDTES  142

Query  198  VHLQAKDILGHVYEYFLGQFALAEGKKGGQYFTPKSIVTLIVEMLKPYSGRIYDPAMGSG  257
               + +D+LG+VYEYF+++FA AEGK++G+++TP SIV L+VEM+ PY GRIYDP  GSG
Sbjct  143  ---RKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSG  199

Query  258  GFFVQADRFIPAHQGNRNAISVYGQESNPNTRKLAVMNMAIRGIPFDFGDKPEDTLLNPL  317
            G FVQ++RF+  HQG  + I++YGQESNP T+KLA MN+AIRGI  D+G++  DT+ N L
Sbjct  200  GMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDL  259

Query  318  HIDKKMDVVMANPPFNQKAWWSESLANDPRWAYGTPPQGNANFAWLQHMIYHLSPKGKMA  377
            H + K D ++ANPPFN   W  E L +D RW +G PP+GNAN+AW++HMI  L+P+G  +
Sbjct  260  HKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAG  319

Query  378  LLLANGSMSSQTSGEGDIRKNIVQADLVEAMIALPNQLFTNTQIPACIWIINKAKA----  433
            ++LANGSMS+   +E +IRKN+++ DLVE +++LP QLF +TQIP C+W+I++ K+    
Sbjct  320  FVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNGK  379

Query  434  --RKKEVLFINATQIGYMKDRVLRDFTADDIAKISDTYHNWQKQDG--YENIPAFCYCAT  489
              RK+E+LFI+A +IG M  R L++F+ +DI K+++TYH+W+  ++  YE+I++FC    
Sbjct  380  KERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGTNDKYYEDIAGFCKVVN  439

Query  490  LDEIAKNDFVLTAGRYVGAAVEEDDGVPFAQKMQELTALLNEQFRQGRALEEKIVANLKG  549
            L+E+ +N+++LT+GRYVG A  E+D  PF QKM+ +T+ L+EQF +++ LE++I  +L G
Sbjct  440  LEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEG  499

Query  550  LGF  552
            LG+
Sbjct  500  LGY  502

299) M493_07015 in NC_022080


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  405 bits (1523),  Expect = 4e-114, Method: Compositional matrix adjust.
 Identities = 238/516 (47%), Positives = 366/516 (71%), Gaps = 23/516 (4%)

Query  5    ADIDFQKDLFEAANKMRGSVAPADYKHYVLPLIFLRYLSNKYEKRRKELEQIVKDPKSDW  64
            A I+F+  L +AA+K+RGS+ +A+YK+  L LIFL+Y+S+ +E + KEL Q   DP    
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQ---DP----  54

Query  65   YTEDDEMRQIIITDPDQYKAENVFVVPEEASWSYIMKNAKQPNIKEILDNAMKRLEEENP  124
            Y++++        D D+Y AEN+F VP EA W YI  NAK+P+I +++D+AM  +E EN 
Sbjct  55   YADEE--------DQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENE  106

Query  125  ELEGILPRIYQGSNLPPENVAGLIEIFSRDVFSANTDDSVDILGRTYEYFISSFAASEGN  184
             L G+LP+ Y  + L  E+++++I++F+  + +       D+LGR YEYFI+ FA++EG+
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLFTFKL-GDTESRKQDVLGRVYEYFIAKFASAEGK  165

Query  185  RGGEFFTPSSIVKLLVAMLEPKSGIVFDPACGSGGMFIQSEEYAPNKHA----LSFYGQE  240
             +GEF+TPSSIVKLLV M+EP  G ++DP CGSGGMF+QSE +  + ++    +++YGQE
Sbjct  166  NAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQE  225

Query  241  NVVTTVRLGKMNVLLHGINAEI--RLGDSLLNDQFPDLKADYVIANPPFNQKDWGADRLS  298
            +  TT +L+KMN+ ++GI+ ++  R +D++ ND   +LKADY++ANPPFN  DWG +RL 
Sbjct  226  SNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLL  285

Query  299  KNDPRLIGPVTNSNANYMWMQHFLYHLNDTGTAGFVMANGAMTTNVKEEKEVRQKLVDEG  358
             +  + +G   ++NANY W++H +  L   GTAGFV+ANG+M+T+ K+E E+R++L++++
Sbjct  286  DDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQD  345

Query  359  YIDCIVQLPEKLFFTTGIPCCLFFLSKNRDGKNGYRARKNEILFIDARKMGTLVSRKQKA  418
             ++CIV LP +LF++T IP CL F+S+N+ G+NG + RKNEILFIDAR +G +VSR  K 
Sbjct  346  LVECIVTLPGQLFYSTQIPVCLWFISNNK-GQNGKKERKNEILFIDAREIGHMVSRTLKE  404

Query  419  LSKEEIDQIAAVYRAYKYEGAERYEDIAGFCKVATIDEVRANDYKLTPGIYVGTEVSNED  478
            +S E+I+++A  Y++ +      YEDIAGFCKV  ++EV+ N+Y LTPG YVG    +ED
Sbjct  405  FSDEDIQKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEED  464

Query  479  DVPFEEKMAELTQRLLEQFEESNCLQEKIKRDLEEL  514
            + PFE+KM  +T  L EQF  S+ L+++I++ LE L
Sbjct  465  EEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

300) GK1380 in NC_006510


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  403 bits (1518),  Expect = 1e-113, Method: Compositional matrix adjust.
 Identities = 237/508 (47%), Positives = 363/508 (72%), Gaps = 23/508 (4%)

Query  1    MFEAANKMRGSVAPADYKHYVLPLIFLRYLSNKYEQRRKELEQIVKDPGSDWYTEDDEMR  60
            + +AA+K+RGS+ +A+YK+  L LIFL+Y+S+ +E++ KEL Q   DP    Y++++   
Sbjct  10   LWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQ---DP----YADEE---  59

Query  61   QIIITDPDQYKAENVFVVPEEASWSYIMKNAKQPNIKEILDNAMKRLEEENPELEGILPR  120
                 D D+Y AEN+F VP EA W YI  NAK+P+I +++D+AM  +E EN  L G+LP+
Sbjct  60   -----DQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPK  114

Query  121  IYQGSNLPPENVAGLIEIFSRDVFSANTDDSVDILGRTYEYFISSFAASEGNRGGEFFTP  180
             Y  + L  E+++++I++F+  + +       D+LGR YEYFI+ FA++EG+ +GEF+TP
Sbjct  115  EYARPALDKEKLGDIIDLFTFKL-GDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTP  173

Query  181  SSIVKLLVAMLEPKSGIVFDPACGSGGMFIQSEEYAPNKHA----LSFYGQENVVTTVRL  236
            SSIVKLLV M+EP  G ++DP CGSGGMF+QSE +  + ++    +++YGQE+  TT +L
Sbjct  174  SSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKL  233

Query  237  GKMNVLLHGINAEI--RLGDSLLNDQFPDLKADYVIANPPFNQKDWGADRLSKNDPRLIG  294
            +KMN+ ++GI+ ++  R +D++ ND   +LKADY++ANPPFN  DWG +RL  +  + +G
Sbjct  234  AKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFG  293

Query  295  PVTNSNANYMWMQHFLYHLNDTGTAGFVMANGAMTTNVKEEKEVRQKLVDEGYIDCIVQL  354
               ++NANY W++H +  L   GTAGFV+ANG+M+T+ K+E E+R++L++++ ++CIV L
Sbjct  294  VPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTL  353

Query  355  PEKLFFTTGIPCCLFFLSKNRDGKNGYRARKNEILFIDARKMGTLVSRKQKALSKEEIDK  414
            P +LF++T IP CL F+S+N+ G+NG + RKNEILFIDAR +G +VSR  K +S E+I+K
Sbjct  354  PGQLFYSTQIPVCLWFISNNK-GQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQK  412

Query  415  IAAVYRAYKYDGAEGYEDIAGFCKVATIEEVRANDYKLTPGIYVGTEVSNEDDVPFEEKM  474
            +A  Y++ +      YEDIAGFCKV  +EEV+ N+Y LTPG YVG    +ED+ PFE+KM
Sbjct  413  VAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKM  472

Query  475  AELTQRLLEQFEESNRLQEKIKQDLEGL  502
              +T  L EQF  S+ L+++I++ LEGL
Sbjct  473  KRITSELSEQFAKSKELEDQIRKSLEGL  500

301) UMN179_00643 in NC_015460


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  402 bits (1512),  Expect = 3e-113, Method: Compositional matrix adjust.
 Identities = 232/461 (51%), Positives = 340/461 (74%), Gaps = 29/461 (6%)

Query  31   RDNYTAENIFWVPAQARWENLKNVVILRKGSELPWGGTFRGVANLIDDAFTAIEKENPKL  90
            +D+Y AENIFWVP +ARW+ +++             +    +++LID A  AIEKEN  L
Sbjct  61   QDEYLAENIFWVPKEARWQYIND------------NAKKPEIGQLIDKAMIAIEKENESL  108

Query  91   KGIIQR-ISGFDVEEQTLIGLVNLFSDTHFNQPTYNGEPISLAAKDILGHVYEYFLGEFA  149
            KG++ +  +   ++ + L ++++LF        T++        +D+LG+VYEYF++ FA
Sbjct  109  KGVLPKEYARPALDKEKLGDIIDLF--------TFKLGDTESRKQDVLGRVYEYFIAKFA  160

Query  150  LAEGKKGGQYFTPKSIVTLIVEMLQPYQGRIYDPAMGSGGFFVQTEKFIEAHQGNINQVS  209
             AEGK++G+++TP SIV L+VEM++PY+GRIYDP  GSGG FVQ+E+F+E HQG +++++
Sbjct  161  SAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIA  220

Query  210  IYGQESNPTTWKLAAMNMAIRGIEFDFGKSNADSFKQPQHIDKKMDFVMANPPFNMKDWW  269
            IYGQESNPTTWKLA MN+AIRGI+ D+G  NAD+F +  H + K D+++ANPPFN  DW 
Sbjct  221  IYGQESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWG  280

Query  270  NESLQDDPRWQYGIPPEGNANFAWLQHMLYHLSPNGRMGLLLANGSMSSQTGGEGEIRQR  329
            +E L DD RWQ+G+PP GNAN+AW++HM+  L+PNG  G++LANGSMS+   +E EIR+ 
Sbjct  281  QERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKN  340

Query  330  LLEADLVECMVALPGQLFTNTQIPACIWFLNKNKP------RAKEVLFIDAREIGYMKDR  383
            L+E DLVEC+V+LPGQLF +TQIP C+WF+++NK       R +E+LFIDAREIG M  R
Sbjct  341  LIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSR  400

Query  384  VLRDFTTEDIAKIADTYHAWQQNNG--YENQAGFCYAASLDEIANNDFVLTPGRYVGTAE  441
             L++F+ EDI K+A+TYH+W+  N+  YE+ AGFC   +L+E+ NN+++LTPGRYVG A+
Sbjct  401  TLKEFSDEDIQKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLAD  460

Query  442  QQDDGIPFAEKMQKLTALLNQQFEQGRELESEIRKNLLMLG  482
             ++D  PF +KM+++T+ L++QF +++ELE +IRK+L  LG
Sbjct  461  VEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLG  501

302) hsdM3 in NC_009053


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  401 bits (1509),  Expect = 5e-113, Method: Compositional matrix adjust.
 Identities = 238/528 (46%), Positives = 365/528 (70%), Gaps = 46/528 (8%)

Query  3    KAADKLRQQLDAANYKHIVLGLIFLKYVSDSFTAQRERLSAQFRDPNSDYYlsditteei  62
            +AADKLR  +DAA+YK++ LGLIFLKYVSDSF         ++++ + D Y  +   +E 
Sbjct  12   QAADKLRGSMDAAEYKNVALGLIFLKYVSDSF-------EEKYKELKQDPYADEEDQDEY  64

Query  63   eseleerdyyTQDNVFWVPQIARWNEIKAVVRANLGDTIFENKTFKGVANLIDEAFDAIE  122
             +          +N+FWVP+ ARW+ I+   +               +++LID A  AIE
Sbjct  65   LA----------ENIFWVPKEARWQYINDNAKKP------------EIGQLIDKAMIAIE  102

Query  123  KDNPKLKGVIQR-ISSYNVDESILIGLVELFSDTNFTHPTLNGKPVSLAAKDILGHVYEY  181
            K+N  LKGV+ +  +   +D   L ++++LF+   F     +++      +D+LG+VYEY
Sbjct  103  KENESLKGVLPKEYARPALDKEKLGDIIDLFT---FKLGDTESRK-----QDVLGRVYEY  154

Query  182  FLGQFALAEGKKGGQYFTPKSIVTLIIEMLEPYEGRIYDPAMGSGGFFVQTERFIREHQG  241
            F+++FA AEGK++G+++TP SIV L++EM+EPY GRIYDP  GSGG FVQ+ERF+  HQG
Sbjct  155  FIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQG  214

Query  242  NPNRVSIYGQEFNPTTWKLAAMNMAIRGLSFDFGKGNADTFSNPQHLDKRMDFVMANPPF  301
              + ++IYGQE NPTTWKLA MN+AIRG+  D+G  NADTF N  H + + D+++ANPPF
Sbjct  215  RLDDIAIYGQESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPF  274

Query  302  NMNEWWNQSLANDPRWKFGTPPSSNANFAWLQHMIYHLSEKGKMALLLANGSMSSNTNNE  361
            N ++W ++ L +D RW+FG PP +NAN+AW++HMI  L+ +G  +++LANGSMS++ ++E
Sbjct  275  NASDWGQERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDE  334

Query  362  GEIRRNIVRADLVEAMIALPSQLFTNTQIPACIWVLNKAKP------RKGEVLFIDARQL  415
             EIR+N++  DLVE +++LP+QLF +TQIP C+W +++ K       RK E+LFIDAR++
Sbjct  335  LEIRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREI  394

Query  416  GYMKTRVMRDFTPKDIASVAETYHQWQKGEG--YQDVPAFCKSATLAEIESHDFVLTPGR  473
            G M +R +++F+  DI  VA+TYH W+  ++  Y+D+++FCK   L E+ +++++LTPGR
Sbjct  395  GHMVSRTLKEFSDEDIQKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGR  454

Query  474  YVGAAEVEDDGIPFAEKMQNLTALLNEQFKQGAELEAKIRANLATLGF  521
            YVG A+VE+D  PF +KM+ +T+ L+EQF ++ ELE +IR +L  LG+
Sbjct  455  YVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGY  502

303) CCDC5079_2529 in NC_017523


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  397 bits (1494),  Expect = 7e-112, Method: Compositional matrix adjust.
 Identities = 229/461 (50%), Positives = 343/461 (75%), Gaps = 21/461 (4%)

Query  11   DDPEQYQGYGVFVVPVSARWKFLAENTKGKPAVGGEPAKNIGQLIDEAMDAVMKANPTLG  70
            +D ++Y +  +F VP  ARW+++ +N+K KP        +IGQLID AM A+ K N +L 
Sbjct  59   EDQDEYLAENIFWVPKEARWQYINDNAK-KP--------EIGQLIDKAMIAIEKENESLK  109

Query  71   GTLPRLYNKDNIDQRRLGELIDLFNSARFSRQGEHRARDLMGEVYEYFLGNFARAEGKRG  130
            G LP+ Y +  +D+ +LG++IDLF + +++ + E R +D++G VYEYF+++FA AEGK +
Sbjct  110  GVLPKEYARPALDKEKLGDIIDLF-TFKLG-DTESRKQDVLGRVYEYFIAKFASAEGKNA  167

Query  131  GEFFTPPSVVKVIVEVLEPSSGRVYDPCCGSGGMFVQTEKFIYEHDGDPKDVSIYGQESI  190
            GEF+TP+S+VK++VE++EP  GR+YDPCCGSGGMFVQ+E+F+  H+G   D++IYGQES 
Sbjct  168  GEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESN  227

Query  191  EETWRMAKMNLAIHGIDNKGLGARWSDTFARDQHPDVQMDYVMANPPFNIKDWARNE--E  248
              TW++AKMNLAI+GIDN +LG R +DTF  D H +++ DY++ANPPFN  DW+++   +
Sbjct  228  PTTWKLAKMNLAIRGIDN-DLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLD  286

Query  249  DPRWRFGVPPANNANYAWIQHILYKLAPGGRAGVVMAngsmssnsngegDIRAQIVEADL  308
            D RW+FGVPP  NANYAWI+H++ KLAP G AG V+ANGSMS+++++E +IR +++E DL
Sbjct  287  DYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDL  346

Query  309  VSCMVALPTQLFRSTGIPVCLWFFAKDKAAGKQGSIDRCGQVLFIDARELGDLVDRAERA  368
            V C+V+LP QLF ST IPVCLWF++++K  G++G  +R  ++LFIDARE+G++V R+ + 
Sbjct  347  VECIVTLPGQLFYSTQIPVCLWFISNNK--GQNGKKERKNEILFIDAREIGHMVSRTLKE  404

Query  369  LTNEEIVRIGDTFHAWRGSKSAAVKGIMYEDVPGFCKSATLAEIKATDYALTPGRYVGTP  428
            +++E+I ++++T+H+WRG++        YED++GFCK   L E+K  +Y LTPGRYVG +
Sbjct  405  FSDEDIQKVAQTYHSWRGTNDK-----YYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLA  459

Query  429  AVEDDGEPIDEKMARLSKALLEAFDESARLERVVREQLGRL  469
             VE+D EP+++KM R++  L E F  S  LE  +R  L  L
Sbjct  460  DVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

304) infB in NC_009566


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  397 bits (1492),  Expect = 9e-112, Method: Compositional matrix adjust.
 Identities = 236/453 (53%), Positives = 330/453 (73%), Gaps = 33/453 (7%)

Query  1    MPASARWQALQEVSILNTGAELPWGGKFAGVARLIDDAFDAIEKDNEKLKGVLQRISGYA  60
            +P  ARWQ +++             +K + +++LID A  AIEK+NE LKGVL +   YA
Sbjct  72   VPKEARWQYIND------------NAKKPEIGQLIDKAMIAIEKENESLKGVLPK--EYA  117

Query  61   ---VNEDTLRGLIILFSDTHFTRPTYNGEPVHLGAKDILGHVYEYFLGRFAQAEGKRGGQ  117
               ++ + L ++I LF        T++    +   +D+LG+VYEYF+++FA AEGK +G+
Sbjct  118  RPALDKEKLGDIIDLF--------TFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGE  169

Query  118  YFTPKSIVSLIVEMLEPYSGRVYDPAMGSGGFFVQTERFITAHQGNINNVSIYGQEFNPT  177
            ++TP SIV L+VEM+EPY GR+YDP  GSGG FVQ+ERF+  HQG +++++IYGQE NPT
Sbjct  170  FYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPT  229

Query  178  TWKLAAMNMAIRGIDYDFGKYNADSFTQPQHIDKKMDFIMANPPFNISDWWSESLADDPR  237
            TWKLA MN+AIRGID D+G  NAD+F +  H + K D+I+ANPPFN SDW  E L DD R
Sbjct  230  TWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYR  289

Query  238  WAYGTPPKGNANFAWLQHMIYHLSPNGKMALLLANGSMSSQTNNEGEIRKGIINANLVEC  297
            W +G PPKGNAN+AW++HMI  L+PNG  +++LANGSMS+  ++E EIRK +I+ +LVEC
Sbjct  290  WQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVEC  349

Query  298  MVALPGQLFTNTQIPACIWFLNRN------KKRKGEVLFIDARQIGYMKDRVLRDFTADD  351
            +V+LPGQLF +TQIP C+WF++ N      K RK E+LFIDAR+IG M  R L++F+ +D
Sbjct  350  IVTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDED  409

Query  352  IAKIANTLHAWQKSDG--YEDQAAFCKSTTLEEIKDNDFVLTPGRYVGTAEQEDDGVPFA  409
            I K+A+T H+W+ +++  YED A+FCK   LEE+K+N+++LTPGRYVG A+ E+D  PF 
Sbjct  410  IQKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFE  469

Query  410  EKMQNLTALLKEQFAKSAELEAEIKKNLGGLGY  442
            +KM+ +T+ L EQFAKS ELE +I+K+L GLGY
Sbjct  470  QKMKRITSELSEQFAKSKELEDQIRKSLEGLGY  502

305) ZPR_3435 in NC_014041


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  395 bits (1486),  Expect = 4e-111, Method: Compositional matrix adjust.
 Identities = 230/476 (49%), Positives = 344/476 (73%), Gaps = 17/476 (3%)

Query  16   LWDAANKLRGSIEPSEYKHVVLGLIFLKFASDKFEVRREELIAEGKEKYLEMKDFYNMKN  75
            LW+AA+KLRGS++++EYK+V LGLIFLK+ SD FE +  EL  +      +  + Y   N
Sbjct  10   LWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDE-YLAEN  68

Query  76   VFFLAETSRWNYLIKNAKQDDIALKIDTALNQIEKNNPSLKGALPDNYFSRLGLDKSKLS  135
            +F ++  +RW+Y+  NAK+ +I+  ID A+  IEK+N SLKG LP +Y +R +LDK KL+
Sbjct  69   IFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-ARPALDKEKLG  127

Query  136  ALLDTIN-KIDTQKDKSQDIVGRVYEYFLSKFALAEGKGKGEFYTPKSIVNLIAEMIEPY  194
             ++D +  K++    + QD++GRVYEYF++KFA AEGK  GEFYTP SIV+L+ EMIEPY
Sbjct  128  DIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPY  187

Query  195  KGIIYDPACGSGGMFVQSIKFIESHHGSKREISIYGQEYTNTTYKLAKMNLAIRGISANL  254
            KG IYDP CGSGGMFVQS +F+E H+G   +I+IYGQE   TT KLAKMNLAIRGI  +L
Sbjct  188  KGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGIDNDL  247

Query  255  GDKAADTFSNDQHKDLKADYIMANPPFNQKDWRGPQELIDDPRWQGYEVPPKSNANYGWI  314
            G++ ADTF ND HK+LKADYI+ANPPFN  DW G + L+DD RWQ + VPPK+NANY+WI
Sbjct  248  GERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYRWQ-FGVPPKGNANYAWI  305

Query  315  LNMVSKLSDDGVAGFILANGALSGGG-EEYKIRRKLVENNLVEAIIILPQNMFYTTNISV  373
             +M+SKL+ +G AGF+LANG++S +G +E  IR++L+E++LVE I+ LP ++FY+T+I+V
Sbjct  306  EHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPV  365

Query  374  TVWILNRNKTAHTRSIGdeerhyrdrheeVLFMDLRQNGEPFEKKFIQFSGTQIKDIART  433
             +W+++ NK  + +          +R +E+LF+D R+ G+   + + +FS+ +I+ +A+T
Sbjct  366  CLWFISNNKGQNGKK---------ERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQT  416

Query  434  YHDWQQEDTN-YKDIPEYCYSATKADIEKKDFSLVPSKYIEFVNRDENID-FDTKM  487
            YH W+  + + Y DI+ +C      ++ ++++ L P++Y+ + + +E+ + F+ KM
Sbjct  417  YHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKM  472

306) VAA_01699 in NC_015633


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  391 bits (1470),  Expect = 7e-110, Method: Compositional matrix adjust.
 Identities = 220/468 (48%), Positives = 332/468 (71%), Gaps = 18/468 (3%)

Query  18   SFEETLWDAANKLRGSVESSEYKHIVLSLIFLKFISDTFEKQRQKLIDAGLEKHIDMVPA  77
            +FEE LW+AA+KLRGS++++EYK++ L+LIFLK++SD+FE + + L +     + D    
Sbjct  5    GFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQ-DE  63

Query  78   YTKDNVFYLPEESRWSFIQKNAKQEDIALKIDTALSTIEKTNKALQGALPDNYFSRLGLD  137
            Y  +N+F +P E+RW +I+ NAK+ +I+  ID A+ +IEK N +L+G LP +Y +R +LD
Sbjct  64   YLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY-ARPALD  122

Query  138  VSKLAALIDVIN-NIDTLANPHEDVVGRVYEYFLSKFAIAEGKGKGEFYTPKSIVNLIAE  196
              KL+ +ID++  +++   +  +DV+GRVYEYF++KFA AEGK  GEFYTP SIV+L+ E
Sbjct  123  KEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVE  182

Query  197  LIEPYKGTIYDPCCGSGGMFVQSLSFIESHKGNKKDVSVYGQEYTGTTYKLAKMNLAIRG  256
            +IEPYKG IYDPCCGSGGMFVQS  F+E H+G   D+++YGQE   TT KLAKMNLAIRG
Sbjct  183  MIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRG  242

Query  257  ISANLGSKDKNTFTDDQHPTLKADFIMANPPYNQKNWRESDELVDDARWDGYETPPTSNA  316
            I  +LG ++ +TF +D H  LKAD+I+ANPP+N  +W   + L+DD RW+ +  PP +NA
Sbjct  243  IDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYRWQ-FGVPPKGNA  300

Query  317  NYAWILHMVSKLSEGGVAGFILSNGVLSSGGTEQ-KIREKLIRNKLVEAIIVLPMNMFYT  375
            NYAWI HM+SKL+  G AGF+L+NG +S++G ++  IR +LI + LVE I+ LP ++FY+
Sbjct  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360

Query  376  TDTSVSLWIINKNKKKQVIEHTVDETVTLRDRENETLFIDARNFGSVYDKKFIEFLYERD  435
            T+ +V LW+I++NK ++            ++R NE LFIDAR++G +  + + EF  + D
Sbjct  361  TQIPVCLWFISNNKGQN----------GKKERKNEILFIDAREIGHMVSRTLKEFS-DED  409

Query  436  IQKIVSIFRSWRGEGFEDNYQNIDELCYSASISEIESKGFSLVPSSYI  483
            IQK+   ++SWRG   +  Y++I  +C   ++ E+ ++ + L P+ Y+
Sbjct  410  IQKVAQTYHSWRGTN-DKYYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

307) J451_03480 in NC_021739


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  378 bits (1421),  Expect = 4e-106, Method: Compositional matrix adjust.
 Identities = 224/468 (48%), Positives = 339/468 (73%), Gaps = 33/468 (7%)

Query  2    EQRDYYAAENIFWVPEQARWDNIKSLSKLNLGDELPWGDKFKGVSRLIDDAFEAIERENP  61
            E++D Y AENIFWVP +ARW+ I+  +K               +++LID A  AIE+EN 
Sbjct  59   EDQDEYLAENIFWVPKEARWQYINDNAKKP------------EIGQLIDKAMIAIEKENE  106

Query  62   KLKGVLQRIAGFGVPD---EMLTGLIDLFSRTNFTQPMHNGEPVHLQAKDILGHVYEYFL  118
             LKGVL +   ++ P    E L ++IDLF+   F   + + E+   + +D+LG+VYEYF+
Sbjct  107  SLKGVLPK--EYARPALDKEKLGDIIDLFT---FK--LGDTES---RKQDVLGRVYEYFI  156

Query  119  GQFALAEGKKGGQYFTPKSIVTLIVEMLEPYSGRIYDPAMGSGGFFVQADRFIQAHAGNR  178
            ++FA AEGK++G+++TP SIV L+VEM+EPY GRIYDP  GSGG FVQ++RF++ H G  
Sbjct  157  AKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRL  216

Query  179  NAISVYGQESNSTTRKLAVMNMAIRGIPFDFGDKPEDTLLNPLHIDKKMDVVMANPPFNQ  238
            + I++YGQESN+TT+KLA MN+AIRGI  D+G++  DT+ N LH + K D ++ANPPFN 
Sbjct  217  DDIAIYGQESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNA  276

Query  239  KEWWNESLANDPRWAYGTPPQGNANFAWLQHMIYHLSPKGKMALLLANGSMSSQTSGEGD  298
             +W +E L +D RW +G PP+GNAN+AW++HMI  L+P+G  +++LANGSMS+   +E +
Sbjct  277  SDWGQERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELE  336

Query  299  IRKNIVQADLVEAMIALPNQLFTNTQIPACIWIINKAKA------RKGEVLFINATQIGY  352
            IRKN+++ DLVE +++LP QLF +TQIP C+W+I++ K+      RK E+LFI+A +IG 
Sbjct  337  IRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGH  396

Query  353  LKDRVLRDFTADDIAKISDTYHNWQKQNG--YENIPAFCYCATLDEIAKNDFVLTAGRYV  410
            +  R L++F+ +DI K+++TYH+W+  N+  YE+I++FC    L+E+ +N+++LT+GRYV
Sbjct  397  MVSRTLKEFSDEDIQKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  411  GAVQEENDGVPFAEKMQELTALLNEQFKQGRELEQQIAENLKGLGYGI  458
            G  + E+D  PF +KM+ +T+ L+EQF +++ELE+QI  +L GLGYG+
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

308) D648_15970 in NC_020834


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  378 bits (1421),  Expect = 4e-106, Method: Compositional matrix adjust.
 Identities = 224/468 (48%), Positives = 339/468 (73%), Gaps = 33/468 (7%)

Query  2    EQRDYYAAENIFWVPEQARWDNIKSLSKLNLGDELPWGDKFKGVSRLIDDAFEAIERENP  61
            E++D Y AENIFWVP +ARW+ I+  +K               +++LID A  AIE+EN 
Sbjct  59   EDQDEYLAENIFWVPKEARWQYINDNAKKP------------EIGQLIDKAMIAIEKENE  106

Query  62   KLKGVLQRIAGFGVPD---EMLTGLIDLFSRTNFTQPMHNGEPVHLQAKDILGHVYEYFL  118
             LKGVL +   ++ P    E L ++IDLF+   F   + + E+   + +D+LG+VYEYF+
Sbjct  107  SLKGVLPK--EYARPALDKEKLGDIIDLFT---FK--LGDTES---RKQDVLGRVYEYFI  156

Query  119  GQFALAEGKKGGQYFTPKSIVTLIVEMLEPYSGRIYDPAMGSGGFFVQADRFIQAHAGNR  178
            ++FA AEGK++G+++TP SIV L+VEM+EPY GRIYDP  GSGG FVQ++RF++ H G  
Sbjct  157  AKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRL  216

Query  179  NAISVYGQESNSTTRKLAVMNMAIRGIPFDFGDKPEDTLLNPLHIDKKMDVVMANPPFNQ  238
            + I++YGQESN+TT+KLA MN+AIRGI  D+G++  DT+ N LH + K D ++ANPPFN 
Sbjct  217  DDIAIYGQESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNA  276

Query  239  KEWWNESLANDPRWAYGTPPQGNANFAWLQHMIYHLSPKGKMALLLANGSMSSQTSGEGD  298
             +W +E L +D RW +G PP+GNAN+AW++HMI  L+P+G  +++LANGSMS+   +E +
Sbjct  277  SDWGQERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELE  336

Query  299  IRKNIVQADLVEAMIALPNQLFTNTQIPACIWIINKAKA------RKGEVLFINATQIGY  352
            IRKN+++ DLVE +++LP QLF +TQIP C+W+I++ K+      RK E+LFI+A +IG 
Sbjct  337  IRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGH  396

Query  353  LKDRVLRDFTADDIAKISDTYHNWQKQNG--YENIPAFCYCATLDEIAKNDFVLTAGRYV  410
            +  R L++F+ +DI K+++TYH+W+  N+  YE+I++FC    L+E+ +N+++LT+GRYV
Sbjct  397  MVSRTLKEFSDEDIQKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  411  GAVQEENDGVPFAEKMQELTALLNEQFKQGRELEQQIAENLKGLGYGI  458
            G  + E+D  PF +KM+ +T+ L+EQF +++ELE+QI  +L GLGYG+
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

309) N220_08960 in NC_021883


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  378 bits (1421),  Expect = 4e-106, Method: Compositional matrix adjust.
 Identities = 224/468 (48%), Positives = 339/468 (73%), Gaps = 33/468 (7%)

Query  2    EQRDYYAAENIFWVPEQARWDNIKSLSKLNLGDELPWGDKFKGVSRLIDDAFEAIERENP  61
            E++D Y AENIFWVP +ARW+ I+  +K               +++LID A  AIE+EN 
Sbjct  59   EDQDEYLAENIFWVPKEARWQYINDNAKKP------------EIGQLIDKAMIAIEKENE  106

Query  62   KLKGVLQRIAGFGVPD---EMLTGLIDLFSRTNFTQPMHNGEPVHLQAKDILGHVYEYFL  118
             LKGVL +   ++ P    E L ++IDLF+   F   + + E+   + +D+LG+VYEYF+
Sbjct  107  SLKGVLPK--EYARPALDKEKLGDIIDLFT---FK--LGDTES---RKQDVLGRVYEYFI  156

Query  119  GQFALAEGKKGGQYFTPKSIVTLIVEMLEPYSGRIYDPAMGSGGFFVQADRFIQAHAGNR  178
            ++FA AEGK++G+++TP SIV L+VEM+EPY GRIYDP  GSGG FVQ++RF++ H G  
Sbjct  157  AKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRL  216

Query  179  NAISVYGQESNSTTRKLAVMNMAIRGIPFDFGDKPEDTLLNPLHIDKKMDVVMANPPFNQ  238
            + I++YGQESN+TT+KLA MN+AIRGI  D+G++  DT+ N LH + K D ++ANPPFN 
Sbjct  217  DDIAIYGQESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNA  276

Query  239  KEWWNESLANDPRWAYGTPPQGNANFAWLQHMIYHLSPKGKMALLLANGSMSSQTSGEGD  298
             +W +E L +D RW +G PP+GNAN+AW++HMI  L+P+G  +++LANGSMS+   +E +
Sbjct  277  SDWGQERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELE  336

Query  299  IRKNIVQADLVEAMIALPNQLFTNTQIPACIWIINKAKA------RKGEVLFINATQIGY  352
            IRKN+++ DLVE +++LP QLF +TQIP C+W+I++ K+      RK E+LFI+A +IG 
Sbjct  337  IRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGH  396

Query  353  LKDRVLRDFTADDIAKISDTYHNWQKQNG--YENIPAFCYCATLDEIAKNDFVLTAGRYV  410
            +  R L++F+ +DI K+++TYH+W+  N+  YE+I++FC    L+E+ +N+++LT+GRYV
Sbjct  397  MVSRTLKEFSDEDIQKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYV  456

Query  411  GAVQEENDGVPFAEKMQELTALLNEQFKQGRELEQQIAENLKGLGYGI  458
            G  + E+D  PF +KM+ +T+ L+EQF +++ELE+QI  +L GLGYG+
Sbjct  457  GLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

310) K756_04795 in NC_021521


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  374 bits (1407),  Expect = 5e-105, Method: Compositional matrix adjust.
 Identities = 213/421 (51%), Positives = 317/421 (76%), Gaps = 17/421 (4%)

Query  31   IANLIDDAFDAIEQDNPKLKNVIQR-ISPYKVDESILLGLIDLFSDTNFTRPTLDGKPIS  89
            I++LID A  AIE++N  LK V+ +  +   +D   L ++IDLF+   F     +++   
Sbjct  90   IGQLIDKAMIAIEKENESLKGVLPKEYARPALDKEKLGDIIDLFT---FKLGDTESRK--  144

Query  90   LAAKDILGHVYEYFLGQFALAEGKKGGQYFTPKSIVTLIIEMLEPYKGRIYDPAMGSGGF  149
               +D+LG+VYEYF+++FA AEGK++G+++TP SIV L++EM+EPYKGRIYDP  GSGG 
Sbjct  145  ---QDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGM  201

Query  150  FVQTERFIREHQGNVSEVSIFGQEFNPTTWKLAAMNMAIRGIEFDFGKGNADTFSNPQHR  209
            FVQ+ERF+  HQG + +++I+GQE NPTTWKLA MN+AIRGI+ D+G  NADTF N  H+
Sbjct  202  FVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHK  261

Query  210  DKKMDFVMANPPFNMKDWWNESLAQDPRWQYGIPPEGNANFAWLQHMIYHLSPNGRMALL  269
            + K D+++ANPPFN  DW +E L +D RWQ+G+PP GNAN+AW++HMI  L+PNG  +++
Sbjct  262  GLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFV  321

Query  270  LANGSMSSNTNNEGEIRKNILKADLVEAMIALPSQLFTNTQIPACIWILNKNKA------  323
            LANGSMS++ ++E EIRKN++  DLVE +++LP+QLF +TQIP C+W++++NK+      
Sbjct  322  LANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKKE  381

Query  324  RKGEVLFIDARQLGYMKDRVLRDFTADDIAKVADTYHHWQQSAD--YQNIPAFCYTATLD  381
            RK E+LFIDAR++G M  R L++F+ +DI KVA+TYH W+ + D  Y++I++FC    L+
Sbjct  382  RKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWRGTNDKYYEDIAGFCKVVNLE  441

Query  382  ELAQKDFVLTPGRYVGAAEQEDDGVPFAEKMQELTALLQQQFKQSAELEAKIKANLASLG  441
            E+ +++++LTPGRYVG A+ E+D  PF +KM+ +T+ L +QF +S ELE +I+ +L +LG
Sbjct  442  EVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLG  501

Query  442  Y  442
            Y
Sbjct  502  Y  502

311) P700755_000890 in NC_018721


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  368 bits (1383),  Expect = 5e-103, Method: Compositional matrix adjust.
 Identities = 225/539 (42%), Positives = 358/539 (67%), Gaps = 44/539 (8%)

Query  8    ADINFEQELWKAANELRGAVAENQYKDYILPLIFLKHISEKYEVRKEELFQALNDKGSDY  67
            A I FE+ LW+AA+ LRG++   +YK+  L LIFLK +S+ +E +    ++ L++     
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEK----YKELKQDP---  54

Query  68   YTNDTEEQNYVLEDPDEYLSKNTYIIPKEATWQYLQDNAEQDNIKVLVDNAFDLLDDTLA  127
            Y+++        ED DEYL+ N + +PKEA WQY++DNA + +I  L+D+A   ++    
Sbjct  55   YADE--------EDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKE--  104

Query  128  EFRPELKGILPRIFVKSQLTPKQVAGLINLLAKPKLSEKENPGSDILGRVYEYYIGKFAI  187
                 LKG+LP+ + ++ L   +++++I+L++  KL++ E+   D+LGRVYEY+I+KFA 
Sbjct  105  --NESLKGVLPKEYARPALDKEKLGDIIDLFT-FKLGDTESRKQDVLGRVYEYFIAKFAS  161

Query  188  AEGSGAGQFFTPSSIVRLLVEMIEPYQGKIFDNACGSGGMFIQSLKFLQAHGGDKKNISI  247
            AEG  AG+F+TPSSIV+LLVEMIEPY+G+I+D  CGSGGMF+QS +F++ H G   +I+I
Sbjct  162  AEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAI  221

Query  248  YGQERYDGTLRLCKMNLALRDLSFDV--RLGDSLLQDKFPDLEADFIIVNPPFNVSQWHP  305
            YGQE    T +L KMNLA+R++  D+  R +D++ +D   +L AD+I+ NPPFN S+W  
Sbjct  222  YGQESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQ  281

Query  306  EDLPENDPRLFGTKEEFTTDGNANYMWMQTFWNHLSDTGTAAVVMANGAMTSNTKGEKNV  365
            E L ++  + FG        GNANY W++   + L+  GTA+ V+ANG+M+++ K+E ++
Sbjct  282  ERLLDDYRWQFGV----PPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEI  337

Query  366  RQHMVDHGMVDCIVRLPDKLFLTTGIPACIFILSKNRDGKDGKHRKRDNEVLFIDLSKHG  425
            R++++++++V+CIV LP++LF +T IP C+ ++S+N+ G++GK + R NE+LFID    G
Sbjct  338  RKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNK-GQNGK-KERKNEILFIDAREIG  395

Query  426  RMESRKLRVFDEADLQKATDTYHAWRNIKDSVTSSDSAKAELYREADTYIDQPGFSYSAN  485
            +M SR L+ F + D+QK ++TYH+WR  +D            Y     Y D +GF    N
Sbjct  396  HMVSRTLKEFSDEDIQKVAQTYHSWRGTNDK-----------Y-----YEDIAGFCKVVN  439

Query  486  LEEIAKQDYKLTPGIYVGTEAVEDDGIPFEHKMETLKAQLQTQFKTGNALQKQILDNFE  544
            LEE+ +++Y LTPG YVG   VE+D  PFE+KM  + ++L  QF  ++ L+ QI  ++E
Sbjct  440  LEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLE  498

312) WQG_11890 in NC_020515


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  364 bits (1369),  Expect = 5e-102, Method: Compositional matrix adjust.
 Identities = 212/455 (47%), Positives = 328/455 (73%), Gaps = 33/455 (7%)

Query  1    MPEQARWDNIKSLSKLNLGDELPWGDKFKGVSRLIDDAFEAIERENPKLKGVLQRIAGFG  60
            +P +ARW+ I+  +K               +++LID A  AIE+EN  LKGVL +   ++
Sbjct  72   VPKEARWQYINDNAKKP------------EIGQLIDKAMIAIEKENESLKGVLPK--EYA  117

Query  61   VPD---EMLTGLIDLFSRTNFTQPMHNGEPVHLQAKDILGHVYEYFLGQFALAEGKKGGQ  117
             P    E L ++IDLF+   F   + + E+   + +D+LG+VYEYF+++FA AEGK++G+
Sbjct  118  RPALDKEKLGDIIDLFT---FK--LGDTES---RKQDVLGRVYEYFIAKFASAEGKNAGE  169

Query  118  YFTPKSIVTLIVEMLEPYSGRIYDPAMGSGGFFVQADRFIQAHAGNRNAISVYGQESNST  177
            ++TP SIV L+VEM+EPY GRIYDP  GSGG FVQ++RF++ H G  + I++YGQESN+T
Sbjct  170  FYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPT  229

Query  178  TRKLAVMNMAIRGIPFDFGDKPEDTLLTPLHIDKKMDVVMANPPFNQKEWWNESLANDPR  237
            T+KLA MN+AIRGI  D+G++  DT+   LH + K D ++ANPPFN  +W +E L +D R
Sbjct  230  TWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYR  289

Query  238  WAYGTPPQGNANFAWLQHMIYHLSPKGKMALLLANGSMSSQTSGEGDIRKNIVQADLVEA  297
            W +G PP+GNAN+AW++HMI  L+P+G  +++LANGSMS+   +E +IRKN+++ DLVE 
Sbjct  290  WQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVEC  349

Query  298  MIALPNQLFTNTQIPACIWIINKAKA------RKGEVLFINATQIGYMKDRVLRDFTVDD  351
            +++LP QLF +TQIP C+W+I++ K+      RK E+LFI+A +IG M  R L++F+ +D
Sbjct  350  IVTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDED  409

Query  352  IAKISDTYHNWQ--KQNSYENIPAFCYSATLDEIAKNDFVLTAGRYVGAVQEEDDGVPFA  409
            I K+++TYH+W+  +++ YE+I++FC    L+E+ +N+++LT+GRYVG  + E+D  PF 
Sbjct  410  IQKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFE  469

Query  410  EKMQELTACLNEQFKQGRELEQQIRKNLAELGFEL  444
            +KM+ +T+ L+EQF +++ELE+QIRK+L  LG+ +
Sbjct  470  QKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

313) MHH_c24290 in NC_021082


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  364 bits (1367),  Expect = 8e-102, Method: Compositional matrix adjust.
 Identities = 214/455 (48%), Positives = 328/455 (73%), Gaps = 33/455 (7%)

Query  1    MPEQARWDNIKSLSKLNLGDELPWGDKFKGVSRLIDDAFEAIERENPKLKGVLQRIAGFG  60
            +P +ARW+ I+  +K               +++LID A  AIE+EN  LKGVL +   ++
Sbjct  72   VPKEARWQYINDNAKKP------------EIGQLIDKAMIAIEKENESLKGVLPK--EYA  117

Query  61   VPD---EMLTGLIDLFSRTNFTQPMHNGEPVHLQAKDILGHVYEYFLGQFALAEGKKGGQ  117
             P    E L ++IDLF+   F   + + E+   + +D+LG+VYEYF+++FA AEGK++G+
Sbjct  118  RPALDKEKLGDIIDLFT---FK--LGDTES---RKQDVLGRVYEYFIAKFASAEGKNAGE  169

Query  118  YFTPKSIVTLIVEMLEPYSGRIYDPAMGSGGFFVQADRFIQAHAGNRNAISVYGQESNST  177
            ++TP SIV L+VEM+EPY GRIYDP  GSGG FVQ++RF++ H G  + I++YGQESN+T
Sbjct  170  FYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPT  229

Query  178  TRKLAVMNMAIRGIPFDFGDKPEDTLLNPLHIDKKMDVVMANPPFNQKEWWNESLANDPR  237
            T+KLA MN+AIRGI  D+G++  DT+ N LH + K D ++ANPPFN  +W +E L +D R
Sbjct  230  TWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYR  289

Query  238  WAYGTPPQGNANFAWLQHMIYHLSPKGKMALLLANGSMSSQTSGEGDIRKNIVQADLVEA  297
            W +G PP+GNAN+AW++HMI  L+P+G  +++LANGSMS+   +E +IRKN+++ DLVE 
Sbjct  290  WQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVEC  349

Query  298  MIALPNQLFTNTQIPACIWIINKAKA------RKGEVLFINATQIGYLKDRVLRDFTADD  351
            +++LP QLF +TQIP C+W+I++ K+      RK E+LFI+A +IG +  R L++F+ +D
Sbjct  350  IVTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDED  409

Query  352  IAKISDTYHNWQKQNG--YENIPAFCYCATLDEIAKNDFVLTAGRYVGAVQEENDGVPFA  409
            I K+++TYH+W+  N+  YE+I++FC    L+E+ +N+++LT+GRYVG  + E+D  PF 
Sbjct  410  IQKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFE  469

Query  410  EKMQELTALLNEQFKQGRELEQQIAENLKGLGYGI  444
            +KM+ +T+ L+EQF +++ELE+QI  +L GLGYG+
Sbjct  470  QKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

314) TREPR_2283 in NC_015578


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  356 bits (1336),  Expect = 2e-99, Method: Compositional matrix adjust.
 Identities = 213/517 (42%), Positives = 347/517 (68%), Gaps = 23/517 (4%)

Query  12   LSLESVLWNCRVVLRNKCNKPTNRDAVLALIFLKFAGDKFEKR----RQEIIAEEGDIPV  67
            +++E  LW+    LR   + +  ++  L+LIFLK+ +D FE +    +Q+  A+E D   
Sbjct  4    IGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDE  63

Query  68   FLEKPSFYLASNVFYLNETSRWSYIVKNASDDKIAVMLDQAMADIEDKNESLKGALPQRF  127
                   YLA N+F +   +RW YI  NA    I+ ++D+AM  IE  NESLKG LP+ +
Sbjct  64   -------YLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY  116

Query  128  FSSLGVNSKDIKSLIDEIN-KISEERFHEKDLIGRVYEYFLQQFAMDEAKEKGEFYTPKA  186
             +  +++   +  +ID +  K+++   + +D++GRVYEYF+ +FA  E+K+ GEFYTP +
Sbjct  117  -ARPALDKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSS  175

Query  187  IVNLIAELIEPYKGRIYDPCCGSGGMFVQSLKFVESHNGNKNNISIFGQESDPDTRRLAK  246
            IV+L+ E+IEPYKGRIYDPCCGSGGMFVQS +FVE H+G  ++I+I+GQES+P T++LAK
Sbjct  176  IVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAK  235

Query  247  MNLAIRGISNNLGDKNASSFTDDRQKDLKVDFIMANPPFNLKAWRGEDELTNDPRWSGYG  306
            MNLAIRGI N+LG++NA +F +D +K+LK D+I+ANPPFN   W G++ L +D RW  +G
Sbjct  236  MNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYRWQ-FG  293

Query  307  TPPVSNANYAWILHILSKLDVSNgiagfllangalgagaEEYNIRKQLIENDKIEAIIVL  366
             PP +NANYAWI H++SKL  +   +  L   +   +G +E +IRK+LIE+D +E I+ L
Sbjct  294  VPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTL  353

Query  367  PREMFYSTDISVTLWILNNNKKPRTLNKRKLRDRQNEVLFIDLRTWNKNVYEKSYVTFDD  426
            P ++FYST+I+V LW+++NNK      +   ++R+NE+LFID R    ++  ++   F D
Sbjct  354  PGQLFYSTQIPVCLWFISNNK-----GQNGKKERKNEILFIDARE-IGHMVSRTLKEFSD  407

Query  427  SQIAAVKKIYTNWQSA-EKGYKNVPELCKSVKITDIRKNDYSLVPSKYIKFIDHDLDID-  484
             +I  V + Y +W+++ +K Y +++ +CK V++ ++++N+Y L P++Y+ + D + D + 
Sbjct  408  EDIQKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEP  467

Query  485  YQKEMKRIQKEMKDILKEEKKSQEMLESAFKGIGYGI  521
            +++ MKRI  E+ + +   K  ++ +  ++ G+GYG+
Sbjct  468  FEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

315) ZPR_4675 in NC_014041


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  356 bits (1338),  Expect = 2e-99, Method: Compositional matrix adjust.
 Identities = 220/528 (42%), Positives = 354/528 (68%), Gaps = 38/528 (7%)

Query  8    ADINFEQELWKAANELRGAVAENQYKDYILPLIFLKHISERYEMRKDEIKKKLNDQTSDY  67
            A I FE+ LW+AA+ LRG++   +YK+  L LIFLK +S+ +E +  E+K+       D 
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQ-------DP  54

Query  68   YTLDEEEQNYVLEDPDEYLSKNVYIIPEKATFQYLQDNAEQDNIKVLVDEAFDILDETLA  127
            Y+ +E++        DEYL+ N++ +P  A  QY++DNA + +I  L+D A   ++    
Sbjct  55   YADEEDQ--------DEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEK---  103

Query  128  ANRPDLKGILPRIFVKSQLTAKQVAGLINLLSNPKLSEKENPDSDILGRVYEYYIGKFAI  187
             +   LKG+LP+ + ++ L   +++++I+L++  KL++ E+   D+LGRVYEY+I+KFA 
Sbjct  104  -ENESLKGVLPKEYARPALDKEKLGDIIDLFTF-KLGDTESRKQDVLGRVYEYFIAKFAS  161

Query  188  AEGSGAGQFFTPGSIVRLLVELIEPYEGKIFDAACGSGGMFVQSLKFLQAHGGDKKNISI  247
            AEG  AG+F+TP+SIV+LLVE+IEPY G+I+D+ CGSGGMFVQS +F++ H G   +I+I
Sbjct  162  AEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAI  221

Query  248  YGQERYDGTLRLCKMNLALRDLSFDV--RLGDSLLQDKFPDLKADFIIVNPPFNVSQWHP  305
            YGQE    T +L KMNLA+R++  D+  R +D++ +D   +LKAD+I+ NPPFN S+W  
Sbjct  222  YGQESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQ  281

Query  306  EDLPENDPRLFGPKEEFTTDGNANYMWMQTFWHHLSDKGTAAVVMANGAMTSNNKGEKNV  365
            E L ++  + FG        GNANY W++     L+ +GTA+ V+ANG+M+++ K+E ++
Sbjct  282  ERLLDDYRWQFGV----PPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEI  337

Query  366  RQLMVEKNMVDCIVRLPDKLFLTTGIPACIFILSKNRDGKDGIHRKRTGEILFIDTSKMG  425
            R+ ++E+++V+CIV LP++LF +T IP C+ ++S+N+ G++G  + R  EILFID+  +G
Sbjct  338  RKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNK-GQNG-KKERKNEILFIDAREIG  395

Query  426  TMESRKLRVFNEQDINKITDTYHAWRNDAERQPELVSGSHNEYKNTDGFSYSATLEEVQN  485
             M SR L+ F+++DI+K+++TYH+WR   ++           Y +  GF     LEEV+N
Sbjct  396  HMVSRTLKEFSDEDIQKVAQTYHSWRGTNDKY----------YEDIAGFCKVVNLEEVKN  445

Query  486  QDYKLTPGIYVGAEAVEDDGIPFEEKMqslqkqlkqqFAEGDRLQKEI  533
            ++Y LTPG YVG   VE+D  PFE+KM+ +  +L +QFA +  L+ +I
Sbjct  446  NEYILTPGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQI  493

316) TOPB45_0145 in NC_015682


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  355 bits (1335),  Expect = 3e-99, Method: Compositional matrix adjust.
 Identities = 221/508 (44%), Positives = 360/508 (71%), Gaps = 21/508 (4%)

Query  8    FEDKLWKAADKLRKKVEVHEYKYIVLGLIFLRYLSFAFeekrkeieekeakHFPEDLRFK  67
            FE+KLW+AADKLR  ++  EYK + LGLIFL+Y+S +FEEK KE+ +     ++++    
Sbjct  6    FEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQD---PYADE----  58

Query  68   VCEDRDFYMANGTLYVPEKARWDYIRKNANQPNIGEIIDQAIEILENEYPKQLKDVIPKI  127
              ED+D Y+A+  + VP  ARW+YI  NA++P+IG++ID+A+  +E+E    LK+V+PK 
Sbjct  59   --EDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKE-NESLKGVLPKE  115

Query  128  YSRVNLDSHDFAYLINLFSQIHFGKDHQAKDIFGRIYEYFLGKFTEAEGKKGGEFYTPRS  187
            Y+R  LD + ++ +I+LF+    + + + +D++GR+YEYF++KF+ AEGK++GEFYTP S
Sbjct  116  YARPALDKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSS  175

Query  188  LTRLIVEILDVKEGRIFDPACGSGGFFISALEKLQREGIGNERLSIYAQESKEFVWKVCK  247
            + +L+VE+++   GRI+DP CGSGG F+ +   ++++    + ++IY+QES+   WK+ K
Sbjct  176  IVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAK  235

Query  248  MNLAIRGVEGDI--RWGDSYHDDKFFDLRADYIVSNPPFNDSEWGRDRVKPNDPRFKYGL  305
            MNLAIRG++ D+  R +D++H+D   +L+ADYI++NPPFN S+WG++R+  +D R ++G+
Sbjct  236  MNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERL-LDDYRWQFGV  294

Query  306  PPENNANYVWIQHYIYHLAPNGKAGFVMANGALSVGGVEG-EIRRKIIQDDLIYGIIATP  364
            PP  NANY WI+H I  LAPNG AGFV+ANG++S +G +  EIR+++I++DL+  I++ P
Sbjct  295  PPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLP  354

Query  365  PKMFYTVSLPASLWFIRKTKPEH----MKGKILFIYAKKMYKSISRKQNIFTEEHIAKIV  420
             ++FY+  +P  LWFI + K ++     K  ILFI A+ +   +SR  + F++E+I K+ 
Sbjct  355  GQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVA  414

Query  421  EKFRKFERGEPEEMINEV-GFAKVATLEEVAKNGYVLTPGRYVGI-KLDEEDISFEEKMS  478
            + ++   RG  +   +++ GF KV  LEEV +N Y+LTPGRYVG+  ++E++ +FE+KM 
Sbjct  415  QTYHSW-RGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMK  473

Query  479  QYSKELSELLRKEAELTEKIREVFKSLG  506
            + + ELSE + K  EL ++IR  + +LG
Sbjct  474  RITSELSEQFAKSKELEDQIRKSLEGLG  501

317) RB2501_07110 in NC_013222


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  353 bits (1326),  Expect = 2e-98, Method: Compositional matrix adjust.
 Identities = 228/530 (44%), Positives = 355/530 (67%), Gaps = 36/530 (6%)

Query  6    ADINFEKELWNAANELRGAVAENQYKDYVLPLIFLKHMSERYEMRRDELM-DAFEDEASN  64
            A I FE  LW+AA+ LRG++   +YK+  L LIFLK +S+ +E +  EL  D++ DE   
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADE---  58

Query  65   YYGLSEDDRNYVLEDPDEYLSKNTYIIPKKATWEFLQDNAERDNIKVLVDEAFDTLDETL  124
                         ED DEYL+ N + +PK A W++++DNA + +I  L+D A  +++   
Sbjct  59   -------------EDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKE-  104

Query  125  GAFRPELKGILPRIFVKSQLTSRQVGGLINLLSHPKLSVKENPESDILGRVYEYYIGKFA  184
                  LKG+LP+ + ++ L   ++G++I+L++  KL+  E+   D+LGRVYEY+I+KFA
Sbjct  105  ---NESLKGVLPKEYARPALDKEKLGDIIDLFTF-KLGDTESRKQDVLGRVYEYFIAKFA  160

Query  185  IAEGSGAGQFFTPGSIVRLMVEMIEPYKGKIFDAACGSGGMFVQSLKFLEAHGGDKRNIS  244
             AEG  AG+F+TP+SIV+L+VEMIEPYKG+I+D+ CGSGGMFVQS +F+E H G   +I+
Sbjct  161  SAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIA  220

Query  245  IYGQERYSGTLRLCKMNLALRDLSFDV--RLGDSLLQDKFPDLEADYILVNPPFNVSQWH  302
            IYGQE  + T +L KMNLA+R++  D+  R +D++ +D   +L ADYIL NPPFN S+W 
Sbjct  221  IYGQESNPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWG  280

Query  303  PEDLPDKDPRLFGPKEEFTTDGNANYMWMQTFWSHLSNTGTAAVVMANGAMTTGNKGEKN  362
             E L D   + FG        GNANY W++   S L+  GTA+ V+ANG+M+T+ K+E +
Sbjct  281  QERLLDDYRWQFGV----PPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELE  336

Query  363  VRQHMVDEGMIDAIVRLPDKLFLTTGIPACIFILSKNRDGKDGVHRERKEEILFIDMSKM  422
            +R++++++++++ IV LP++LF +T IP C+ ++S+N+ G++G  +ERK+EILFID   +
Sbjct  337  IRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNK-GQNG-KKERKNEILFIDAREI  394

Query  423  GRMESRRLRVFDEADLIKAVEAYHAWRNLPNKDNAPYENQDGFCYAATLEEVQKQDYKLT  482
            G+M SR L+ F + D+ K  ++YH+WR   +K    YE+  GFC    LEEV++++Y LT
Sbjct  395  GHMVSRTLKEFSDEDIQKVAQTYHSWRGTNDK---YYEDIAGFCKVVNLEEVKNNEYILT  451

Query  483  PGIYVgieeeeddgipfeeKLAILKAQLKEQFREGEDLK---RKILDNFD  529
            PG YVG+ + E+D  PFE+K+  + ++L EQF  + +L    RK L+ ++
Sbjct  452  PGRYVGLADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLG  501

318) SRU_1098 in NC_007677


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  352 bits (1322),  Expect = 3e-98, Method: Compositional matrix adjust.
 Identities = 228/515 (45%), Positives = 356/515 (70%), Gaps = 23/515 (4%)

Query  14   ADLEIEDELWEAAVDLRGTIAPANYKNYVLPllflrylslryeerreeleeKAEDPDSYY  73
            A + +E+ LW+AA  LRG++ +A+YKN  L L+FL+Y+S  +EE+  EL    +DP   Y
Sbjct  2    ATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKEL---KQDP---Y  55

Query  74   VEEDLREVDEYRQEGAFLIPEEARWDYLVEHAQDDDIKVKVDRAMELLQQRYDDLEGVLP  133
             +E+  + DEY  E  F +P EARW+Y+ ++A+  +I   +D+AM  +++  + L GVLP
Sbjct  56   ADEE--DQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLP  113

Query  134  PMYAGSNLTQENLANLINLFSRDIFTGQGKQQADVLGRVYEYFITNFADTEGSKGGEFFT  193
              YA + L +E+L+++I+LF+  +   ++++Q DVLGRVYEYFI++FA +EG ++GEF+T
Sbjct  114  KEYARPALDKEKLGDIIDLFTFKLGDTESRKQ-DVLGRVYEYFIAKFASAEGKNAGEFYT  172

Query  194  PRSVVQALVAMLEPEDGSKIFDPACGSGGMFVQAAEFTDDKES----LSFYGQESVDQNL  249
            P S+V+ LV M+EP  G +I+DP CGSGGMFVQ+  F +  ++    +++YGQES     
Sbjct  173  PSSIVKLLVEMIEPYKG-RIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTW  231

Query  250  RLCKMNLLMHDLQGDLE--SGDSLLNDKHEGLKADYVIANPPFNIRSWGADEIPGDDPRL  307
            +L KMNL +++++ DL   ++D++ ND H GLKADY++ANPPFN   WG + +  DD R 
Sbjct  232  KLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLL-DDYRW  290

Query  308  QVGDRRLQPTDSNANYMWMMHFLHHLEDGGTAGYVMANGSMTTSLTNEEPVRKALVDERF  367
            Q G     P  +NANY W+ H +  L   GTAG+V+ANGSM+TS  +E  +RK L+++ +
Sbjct  291  QFG----VPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDL  346

Query  368  VDCIVQLPDKLFFGTGIPACLWFLSRNRDGSNGERERSDEILFLDGRDMGELPERAKRVL  427
            V+CIV LP++LF++T IP CLWF+S N+ G NG +ER +EILF+D+R++G++  R+ + +
Sbjct  347  VECIVTLPGQLFYSTQIPVCLWFISNNK-GQNGKKERKNEILFIDAREIGHMVSRTLKEF  405

Query  428  TDDEIGRLETAYRNFRMPDEK-VEEEPGFSGVASLEEVRSNDYKLTPGLYVGFEDDDGDR  486
            +D++I ++  +Y++ R  ++K  E+ +GF  V +LEEV++N+Y LTPG YVG+ D + D 
Sbjct  406  SDEDIQKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDE  465

Query  487  VPFEVKMPQLVDELEDQFAESERLQSQIEKQLADL  521
             PFE KM ++  EL +QFA S  L+ QI K L +L
Sbjct  466  EPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGL  500

319) CDHC03_2198 in NC_016787


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  339 bits (1271),  Expect = 4e-94, Method: Compositional matrix adjust.
 Identities = 212/526 (41%), Positives = 335/526 (64%), Gaps = 28/526 (5%)

Query  10   LTLEQVLWNCRVALRSVGSTEKNRDAVISLVFLKFAGDKFAKQREALKTQ-YGDIPAFLE  68
            + +E+ LW+    LR+   +   ++  ++L+FLK+ +D F  +   LK + Y+D     E
Sbjct  4    IGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADE----E  59

Query  69   KPSFYNADNVFYLNESSRWDFLVAHAGANDIAILIDNAMADIEKNNPSLGGALPQGLFAT  128
                Y A+N+F +   +RW+++  +A   +I+ LID+AM  IEK+N SL G LP+  +A 
Sbjct  60   DQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKE-YAR  118

Query  129  LGASPASIKSLIDEIG-KINQQRFPEEDLIGRVYEYFLQSYAAAGTKEDGEFYTPSSIVK  187
             +     +  +ID +  K+ +     +D++GRVYEYF+  +A+A  K+ GEFYTPSSIVK
Sbjct  119  PALDKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVK  178

Query  188  LIAEIIEPYKGTVYDPCCGSGGMFVQSMKFIERHHGNKLNISILGQESKADTWRLCKMNL  247
            L+ E+IEPYKG +YDPCCGSGGMFVQS +F+E+H+G   +I+I GQES++ TW+L KMNL
Sbjct  179  LLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNL  238

Query  248  AARGISYDLGEKNASTFTDDQHLDRKVNFIMANPPFNLKGWRGEDELTKDSRWAGYPVVP  307
            A RGI  DLGE+NA TF +D H + K ++I+ANPPFN  +W G++ L  D RW  +  VP
Sbjct  239  AIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYRWQ-FG-VP  295

Query  308  PVANANYAWILHMISKLDVNDgiagfllangalnagDDEAKIRKEIIERDLIEAIIVLPR  367
            P +NANYAWI HMISKL  N+  +  L   +   +G DE  IRK++IE+DL+E I+ LP 
Sbjct  296  PKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPG  355

Query  368  DMFYTTDISVTLWVINMNKKAGRHGDRELRDRTGEILFMDLRRWNENIDIIQIDKNKRKK  427
            ++FY+T+I+V LW I+ NK     G+   ++R  EILF+D R         +I+    + 
Sbjct  356  QLFYSTQIPVCLWFISNNK-----GQNGKKERKNEILFIDAR---------EIGHMVSRT  401

Query  428  KVAFTDEQIQQAKDIYNAWQDADRSKYEDVPELCKSASLEGDEGIRARGYTLAPSKYIEF  487
               F+DE+IQ+  + Y++W++++   YED++ +CK  +L   E ++   Y L+P++Y+ +
Sbjct  402  LKEFSDEDIQKVAQTYHSWRGTNDKYYEDIAGFCKVVNL---EEVKNNEYILTPGRYVGL  458

Query  488  IDHDLDID-YETEMKRIQKEMTKLLQEQRESQAMLEAAFKGIGYDI  532
             D + D + +E  MKRI  E++  +   +E +  +  ++ G+GY++
Sbjct  459  ADVEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGYGV  504

320) MJECL42 in NC_001732


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  322 bits (1206),  Expect = 5e-89, Method: Compositional matrix adjust.
 Identities = 214/522 (41%), Positives = 350/522 (68%), Gaps = 30/522 (5%)

Query  45   TPEFENQLWKVADKLRKKMEVHQYKYVVLGLIFLRALTCRFYERRKEIEEELSNPNSELY  104
            T  FE++LW+ ADKLR  M+  +YK V LGLIFL+ ++  F E+ KE+ ++        Y
Sbjct  3    TIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDP-------Y  55

Query  105  TEDPELRKMILEDEDFYLSEGVLYLPKETRWDYFVENVMSPNIGEIIDTAIEILEEKYPD  164
            +++        ED+D YL+E ++ +PKE+RW+Y+ +N   P+IG++ID A+ I  EK  +
Sbjct  56   ADE--------EDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAM-IAIEKENE  106

Query  165  RLKDVIPKIYAQSPLDNHDYSYLINKFSEISFGKEHRVKDVFGRIYEYFLGKFTEVEGKL  224
             LK+V+PK YA+++LD++  + +I+ F+    + E R +DV+GR+YEYF++KF+  EGK 
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKN  166

Query  225  GGKFYTPRSLTKLIVDVLDVKGGSIFDPACGSGGFFVSALEKLEREGIDINELSIYGQDS  284
            +G FYTP S+ KL+V++++   G I+DP CGSGG FV +   +E++   +++++IYGQ+S
Sbjct  167  AGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQES  226

Query  285  DPMAYRLTKMNLIIRGAEGDI--RIDDSYHDDKFMDMTFDYVVANPPFNDSEWDANRIKP  342
            +P + +L+KMNL IRG + D+  R  D++H+D   ++  DY++ANPPFN S+W+ +R+  
Sbjct  227  NPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERL-L  285

Query  343  DDPRLRIGNKKVPVPPNGNANYMWILHFIYHTAPNGKAGFVMANGALSAGNVEG-EIRKA  401
            DD R ++G     VPP+GNANY WI H I   APNG AGFV+ANG++S++  +  EIRK 
Sbjct  286  DDYRWQFG-----VPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKN  340

Query  402  IIENDLVYGIVACPPKLFYNVSLPVSLWFIRKEKPDY----MKGKVLFINAKNLYKQISR  457
            +IE+DLV  IV+ P +LFY+  +PV LWFI ++K +      K  +LFI+A+++   +SR
Sbjct  341  LIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSR  400

Query  458  RQNILTEEHIKKIVDKFRMFESGEDEDKINELGFAKVATIDEIAKNGYVLTPGRYVGV-K  516
              + +++E+I+K+ + ++   + +D    +  GF KV  ++E+ +N Y+LTPGRYVG+  
Sbjct  401  TLKEFSDEDIQKVAQTYHSWRGTNDKYYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLAD  460

Query  517  IEDDGIPFEVkmkeyseelkklldeeeklrnkVKEILDALGF  558
            +E+D  PFE KMK  + EL   +     L ++++  L++LG+
Sbjct  461  VEEDEEPFEQKMKRITSELSEQFAKSKELEDQIRKSLEGLGY  502

321) TherJR_0899 in NC_014152


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  313 bits (1174),  Expect = 2e-86, Method: Compositional matrix adjust.
 Identities = 202/491 (42%), Positives = 327/491 (67%), Gaps = 37/491 (7%)

Query  1    MPSINNEIEKKLWNAADQLRANSKLKASEYSVPVLGLIFLRFADQRFSAAEKELVEKAKV  60
            M++I   +E KLW+AAD+LR++  + A+EY    LGLIFL++  + F    KEL + +  
Sbjct  1    MATIG--FEEKLWQAADKLRGS--MDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYA  56

Query  61   SGSRRAIGKADYQARGVMYLPEQAKYSYLLKLPEGENIGKAVNEAMKAIEAENEDLKDVL  120
                   ++ +Y A  +  +P +A+  Y+   +   +IG+ ++ AM AIE ENE LK+VL
Sbjct  57   DEE----DQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVL  112

Query  121  PKTYTR--LDNDTLIALLKIFSEIPMDVEG---DVFGNVYEYFLGEFARSEGQRGGEFYT  175
            PK Y+R  LD++ L  ++ +F+    D E+   DV+G VYEYF++ FA +EG+ +GEFYT
Sbjct  113  PKEYARPALDKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYT  172

Query  176  PTSLVKLIVEVIEPYKGRILDPACGSGGMFVQSARFVQNHKKNPSSEISIYGQEKVAETV  235
            P+S+VKL+VE+IEPYKGRI DP CGSGGMFVQS RFV++H +    +I+IYGQE  + T 
Sbjct  173  PSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKH-QGRLDDIAIYGQESNPTTW  231

Query  236  RLCKMNLAVHGLSGDI--RQANTYYENVHNCINRFDFVMANPPFNVDGVDKEKIKDDPRY  293
            +L KMNLA++G+  D+  R+A+T+ +++H+ ++  D+++ANPPFN  + ++E++ DD R 
Sbjct  232  KLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKA-DYILANPPFNASDWGQERLLDDYRW  290

Query  294  PFGLPSNDNANYIWIQEFYSALNDKGRAGFVMANSASDARG-SELEIRKKLIQDKVVDVM  352
             FG+P+++NANY WI++  S L  +G AGFV+AN++  + G  ELEIRK+LI++ +V+ +
Sbjct  291  QFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECI  350

Query  353  IAIGPNFFYTVTLPCTLWFFDKGKRQT---ERGDKVLFIDARNIYRQVDRAHREFTPEQI  409
            +++  ++FY+  +P  LWF+ + K Q    ER + +LFIDAR+I + V R+ +EF+ E+I
Sbjct  351  VTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDI  410

Query  410  EFIANIVRLYRGEPVETASGSEDMLKEHFPEGKYVDIPGLCKVTTIAEIEAQGWSLNPGR  469
            + +A+  +  RG             ++ +    Y DI+G+CKV  + E+  +   L PGR
Sbjct  411  QKVAQTYHSWRGT------------NDKY----YEDIAGFCKVVNLEEVKNNEYILTPGR  454

Query  470  YVGVAQKDEED  480
            YVG+A+ +E++
Sbjct  455  YVGLADVEEDE  465

322) Slip_1127 in NC_014220


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  305 bits (1142),  Expect = 5e-84, Method: Compositional matrix adjust.
 Identities = 209/493 (43%), Positives = 328/493 (67%), Gaps = 36/493 (7%)

Query  1    MPSINNEIEKKLWNAADQLRANSKLKASEYSVPVLGLIFLRFADHKFSMaekelakkaka  60
            M++I   +E KLW+AAD+LR++  + A+EY    LGLIFL++  + F    KEL + + A
Sbjct  1    MATIG--FEEKLWQAADKLRGS--MDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYA  56

Query  61   GSRRVIGKADYQARGVMYLPEQARYSYLLKLPEGENIGKAVNEAMKAIEAENEDLKDVLP  120
            +     ++ +Y A  +  +P +AR  Y+   +   +IG+ ++ AM AIE ENE LK+VLP
Sbjct  57   DEE---DQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLP  113

Query  121  KTYTR--LDNDTLIALLKTFSEIPMDVEG---DVFGNVYEYFLGEFARSEGQRGGEFYTP  175
            K Y+R  LD++ L  ++  F+    D E+   DV+G VYEYF++ FA +EG+ +GEFYTP
Sbjct  114  KEYARPALDKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTP  173

Query  176  TSLVKLIVEVIEPYRGRILDPACGSGGMFVQSARFVQNHKKNPSSEISIYGQEKVAETVR  235
            +S+VKL+VE+IEPY+GRI DP CGSGGMFVQS RFV++H +    +I+IYGQE  + T +
Sbjct  174  SSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKH-QGRLDDIAIYGQESNPTTWK  232

Query  236  LCKMNLAVHGLSGDI--RQANTYYENVHNCIGRFDFVMANPPFNVDGVDKEKIKDDPRYP  293
            L KMNLA++G+  D+  R+A+T+ +++H+ + + D+++ANPPFN  + ++E++ DD R  
Sbjct  233  LAKMNLAIRGIDNDLGERNADTFHNDLHKGL-KADYILANPPFNASDWGQERLLDDYRWQ  291

Query  294  FGLPTVDNANYIWIQEFYSALNDTGRAGFVMANSASDARG-SELEIRKKLIQDRVVDVMI  352
            FG+P  +NANY WI++  S L   G AGFV+AN++  + G  ELEIRK+LI++ +V+ ++
Sbjct  292  FGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIV  351

Query  353  TIGPNFFYTVTLPCTLWFFDKGKRQT---ERGNKVLFIDARNIYRQVDRAHREFTPEQIE  409
            T+  ++FY+  +P  LWF+ + K Q    ER N +LFIDAR+I + V R+ +EF+ E+I+
Sbjct  352  TLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQ  411

Query  410  FIANIVRLYRGEPVETVNGSDEMLEDKFPEGKYVDVPGLCKVATIEEIEAQGWSLNPGRY  469
             +A+  +  RG             +DK+    Y D++G+CKV  +EE+  +   L PGRY
Sbjct  412  KVAQTYHSWRGT------------NDKY----YEDIAGFCKVVNLEEVKNNEYILTPGRY  455

Query  470  VGVAQKEEEDYDF  482
            VG+A+ EE++  F
Sbjct  456  VGLADVEEDEEPF  468

323) Metvu_0940 in NC_013407


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  304 bits (1139),  Expect = 1e-83, Method: Compositional matrix adjust.
 Identities = 205/495 (42%), Positives = 331/495 (67%), Gaps = 34/495 (6%)

Query  10   TPEFENQLWKVADKLRKKMEVHQYKYVVLGLIFLRALTCRFYERRKEIEDELSNPNSELY  69
            T  FE++LW+ ADKLR  M+  +YK V LGLIFL+ ++  F E+ KE+       + + Y
Sbjct  3    TIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKEL-------KQDPY  55

Query  70   TEDPELRKMILEDKDFYLSEGVLYLPKETRWDYFVENVMSPNIGEIIDTAIEILEEKYPD  129
            +++        ED+D YL+E ++ +PKE+RW+Y+ +N   P+IG++ID A+ I  EK  +
Sbjct  56   ADE--------EDQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAM-IAIEKENE  106

Query  130  RLKNVIPKIYAQSPLDNHDYAYLINKFSEISFGKEYKVKDVFGRIYEYFLGKFTEVEGKL  189
             LK V+PK YA+++LD++  + +I+ F+    + E + +DV+GR+YEYF++KF+  EGK 
Sbjct  107  SLKGVLPKEYARPALDKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKN  166

Query  190  GGKFYTPRSLTKLIVDVLDIKGGTIFDPACGSGGFFVSALEKLEGEGIDINELSIYGQDS  249
            +G FYTP S+ KL+V++++   G I+DP CGSGG FV +   +E +   +++++IYGQ+S
Sbjct  167  AGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQES  226

Query  250  DPMAYRLTKMNLIIRGAEGDI--RIGDSYHDDKFMNMVFDYVVANPPFNDSEWDSNRIKP  307
            +P + +L+KMNL IRG + D+  R +D++H+D    +  DY++ANPPFN S+W+ +R+  
Sbjct  227  NPTTWKLAKMNLAIRGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERL-L  285

Query  308  DDPRLRIGnkkvpvppnnnANYMWILHFIYHTKSNGKAGFVMANGALSAGNVEG-EIRKA  366
            DD R ++G     VPP+ NANY WI H I    +NG AGFV+ANG++S++  +  EIRK 
Sbjct  286  DDYRWQFG-----VPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKN  340

Query  367  IIENDLVYGIVACPPKLFYNVSLPVSLWFIRKEKPDY----MKGKVLFINAKNLYKQISR  422
            +IE+DLV  IV+ P +LFY+  +PV LWFI ++K +      K  +LFI+A+++   +SR
Sbjct  341  LIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSR  400

Query  423  RQNILTEEHINKIVDKFKMLESGENE--EKINELGFAKVATIDEIAKNGYVLTPGRYVGV  480
              + +++E+I+K+ + +    + ++   E I   GF KV  ++E+ +N Y+LTPGRYVG+
Sbjct  401  TLKEFSDEDIQKVAQTYHSWRGTNDKYYEDIA--GFCKVVNLEEVKNNEYILTPGRYVGL  458

Query  481  -KIEDDGIPFEVKMK  494
              +E+D  PFE KMK
Sbjct  459  ADVEEDEEPFEQKMK  473

324) Mbar_A2666 in NC_007355


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  304 bits (1138),  Expect = 1e-83, Method: Compositional matrix adjust.
 Identities = 195/472 (42%), Positives = 321/472 (69%), Gaps = 25/472 (5%)

Query  9    ENRLWDVANELRANSGLKASEYSVPVLGLIFLRYaefkfakaekelklelenesssrrrk  68
            E++LW+ A+ LR+  ++ A+EY    LGLIFL+Y    F    KELK +   +       
Sbjct  7    EEKLWQAADKLRG--SMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEE-----  59

Query  69   keISKIDFQAKGVLYLPKKARYSYLLNLPESENIGKAVNDAMEAIEAENPELTDTLPKNY  128
                + ++ A  ++ +PK AR  Y+ + +   +IG+ ++ AM AIE EN  L + LPK+Y
Sbjct  60   ---DQDEYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEY  116

Query  129  T--SFENDLLVALLK--AFKL--PPEIKGDAFGKIYEYFLGKFAMAEGQKGGEFFTPTSL  182
            +  +++++ L  ++   +FKL      K D +G++YEYF++KFA AEG+++GEF+TP+S+
Sbjct  117  ARPALDKEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSI  176

Query  183  VRLIVEIIEPYHGRILDPACGSGGMFVQSAHFVENQHKEASSEISIYGQEKVADTVRLCK  242
            V+L+VE+IEPY GRI DP CGSGGMFVQS +FVE+ H+    +I+IYGQE  + T +L K
Sbjct  177  VKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEK-HQGRLDDIAIYGQESNPTTWKLAK  235

Query  243  MNLAVHGLSGDI--KEGNTYYEDIHNSVDAFDFVMANPPFNVKKVDFEKVKGDKRVPLGT  300
            MNLA++G+  D+  ++++T+ +D+H+++ A D+++ANPPFN    + E++ +D R  +G 
Sbjct  236  MNLAIRGIDNDLGERNADTFHNDLHKGLKA-DYILANPPFNASDWGQERLLDDYRWQFGV  294

Query  301  PSTDNANYLWIQHFWSTLNEKGRAGFVMANSASDARGTEA-EIRKQLIEGNAVDVMVSIG  359
            P+ +NANY WI+H  S L  +G AGFV+AN++  + G +  EIRK+LIE + V+ +V++ 
Sbjct  295  PPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLP  354

Query  360  SNFFYTVTLPCTLWFLDKGKARTSRKDK---ILFIDAREIFTQVDRAHREFTGEQIEKLA  416
            +++FY+  +P  LWF+ + K++ ++K++   ILFIDAREI   V R+ +EF++E+I+K+A
Sbjct  355  GQLFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVA  414

Query  417  GIVRSYREKEGSEPYEDVKGLCKVATLDEVREQGYSLNPGRYVGVAEAVEED  468
               +S R  ++   YED+ G+CKV  L+EV+++ Y L PGRYVG+A+  E++
Sbjct  415  QTYHSWRGTNDK-YYEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADVEEDE  465

325) Tmz1t_0004 in NC_011662


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  303 bits (1135),  Expect = 2e-83, Method: Compositional matrix adjust.
 Identities = 205/480 (43%), Positives = 318/480 (67%), Gaps = 37/480 (7%)

Query  8    LETRLWAAADQLWANTGLKPSEFSNPVLGLIFLRYAEKRFHEAEAKLIESGLGVSEIEKF  67
            +E +LW AAD+L    ++ ++E+ N  LGLIFL+Y    F+E    L +   +  E +  
Sbjct  6    FEEKLWQAADKL--RGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQD-  62

Query  68   DYQAEGALYLPDNAHFSYLLDLAEGQDLGKavneamaaveaeneeLKGVLPRSYGR--LP  125
            +Y AE  + +P +A+  Y+ D A   ++G+ ++ AM A+E ENE LKGVLP+ Y+R  L 
Sbjct  63   EYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALD  122

Query  126  NTVLVELLRVLN-GLGEVEG---DAFGKIYEYFLGKFALAEGQKGGVFYTPTSIVKLIVE  181
            +  L +++ ++   LG+ E+   D +G++YEYF++KFA AEG+++G FYTP+SIVKL+VE
Sbjct  123  KEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVE  182

Query  182  IIEPFHGKIFDPACGSGGMFVQSAQFVSRHQKRAAEELTVYGTEKANDTVKLAKMNLAVH  241
            +IEP+ G+I+DP CGSGGMFVQS +FV +HQ R  +++++YG E    T KLAKMNLA++
Sbjct  183  MIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGR-LDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  242  GLSGDI--RESNTYYEDPHKAVVGNTGKFDFVMANPPFNVSGVDKERVKDDPRFPFGIPT  299
            G+  D+  R+++T+ +D HK++     K D+++ANPPFN S+ ++ER+ DD R  FG+P 
Sbjct  242  GIDNDLGERNADTFHNDLHKGL-----KADYILANPPFNASDWGQERLLDDYRWQFGVPP  296

Query  300  TDNANYLWIQHFYTALNERGRAGFVMANSAGDARGT-ELEIRKKLIQTGGVDVIVSVGSN  358
             +NANY WI+H  + L   G AGFV+AN++  + G  ELEIRK+LI+ + V+ IV++ ++
Sbjct  297  KGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQ  356

Query  359  FFYTVTLPCTLWFFDRAK---AKGERKDEVLFIDARGTYRQVSRAIRDFLPEQIEFLANI  415
            +FY+  +P  LWF+   K   +K ERK+E+LFIDAR   + VSR++++F  E+I+ +A+ 
Sbjct  357  LFYSTQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQT  416

Query  416  VRLWRGEAVEIEAGSQEMLRQQFPEGGYRDIAGVCKVATLAEIEAQGWSLNPGRYVGVAD  475
             + WRG              +++    Y DIAG CKV  L E+  +   L PGRYVG+AD
Sbjct  417  YHSWRGTN------------DKY----YEDIAGFCKVVNLEEVKNNEYILTPGRYVGLAD  460

326) WEN_00895 in NC_018149


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  298 bits (1118),  Expect = 5e-82, Method: Compositional matrix adjust.
 Identities = 205/510 (41%), Positives = 326/510 (64%), Gaps = 28/510 (5%)

Query  13   DQMWEEIVALRGSADSINYKLPVLYLFFLKYLDDKFHER-RKVIEETIGSRHIDNPTFYT  71
            +++W+    LRGS D+ +YK   L L+FLKY+ D F+E+ + + ++  +  + ++   Y 
Sbjct  8    EKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQDE--YL  65

Query  72   GEGVPYLHKESRWEEVRE--KEGNILVNLDQAFAYIEEANLKTFKDVFKKDCFTSKDIGL  129
            +E +  + KE+RW+ + +  K  +I   +D+A   IE  N  ++K+V+ K+ ++   ++ 
Sbjct  66   AENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKEN-ESLKGVLPKE-YARPALDK  123

Query  130  DPI-NVKSLMDVIVNTDSAGEGDFLGKAYQYLLNKFA-IKGDGNSEFYTPQSIVKLMVSL  187
            + + ++  L    +    +   D LG+ Y+Y++ KFA   G   +EFYTP SIVKL+V +
Sbjct  124  EKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEM  183

Query  188  IEPFEGNIYDPCCGSGGMFVQTTEMVKNIQFGKQKISIYGQELSKSTYGLCKMNLAMRGI  247
            IEP+ G IYDPCCGSGGMFVQ+   V + Q   + I+IYGQE + +T  L KMNLA+RG 
Sbjct  184  IEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRG-  242

Query  248  IDAELGEPKC-TLKHDQHPTVKVDYVLSNPPFNWSKWREENSLVDDPRWVGYDVPPASNA  306
            ID +LGE +  T+ +D H  +K DY+L+NPPFN S W  ++ L+DD RW  ++VPP +NA
Sbjct  243  IDNDLGERNADTFHNDLHKGLKADYILANPPFNASDW-GQERLLDDYRW-QFGVPPKGNA  300

Query  307  NYAWILHILDKLSQNGVAGVLLANKSLDATGKEE-KIRKKLIESDLIEAIITLPRKTFYN  365
            NYAWI H++ KL+ NG AG +LAN S+ ++GK+E  IRK+LIE DL+E I+TLP + FY+
Sbjct  301  NYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYS  360

Query  366  TDIAVTLWIINRNKKARELKEDRKLRDRTNQILFVDARELGSVYEKSFVEFTEEDIALIT  425
            T+I+V LW+I+ NK     KE      R N+ILF+DARE+G +  +++ EF++EDI  ++
Sbjct  361  TQIPVCLWFISNNKGQNGKKE------RKNEILFIDAREIGHMVSRTLKEFSDEDIQKVA  414

Query  426  KTFHSWR--YENYSEKYEDKDGFCKSISLEELKSISPEYSLFPNTYIPFKAPENTHD-WN  482
            +T+HSWR   ++Y   YED  GFCK ++LEE+K  + EY L P  Y+ +   E+ ++  +
Sbjct  415  QTYHSWRGTNDKY---YEDIAGFCKVVNLEEVK--NNEYILTPGRYVGLADVEEDEEPFE  469

Query  483  AEIIDLAQQLTQLFKEESQLKSQVEGILAN  512
              +  ++ +L++ F    +L  Q+   L  
Sbjct  470  QKMKRITSELSEQFAKSKELEDQIRKSLEG  499

327) Deipr_1486 in NC_015161


> NC_007168_R1|42|G42|70725065|YP_251979.1|Staphylococcus_haemolyticus_JCSC1435|-|43465..44979|hsdM|SH0064|type 
I restriction-modification 
system DNA methylase
Length=504

 Score =  290 bits (1086),  Expect = 1e-79, Method: Compositional matrix adjust.
 Identities = 194/484 (41%), Positives = 317/484 (66%), Gaps = 37/484 (7%)

Query  9    ALEKRLWDAADQMRANSKLKSHEYSTPVLGLVFLSYADYRFQNKAEEIGLDA-----DPD  63
            ++E +LW+AAD++R++  + + EY    LGL+FL Y    F++K  E+  D+     D D
Sbjct  5    GFEEKLWQAADKLRGS--MDAAEYKNVALGLIFLKYVSDSFEEKYKELKQDPYADEEDQD  62

Query  64   DFMAEGVLYVPEKARYSELLKLPeganigaaineamnaieaQNPDLTGALPKMYNR--LD  121
            +++AE ++ VP  AR   +   +  ++IG  I+ AM AIE +N  L G LPK Y R  LD
Sbjct  63   EYLAENIFWVPKEARWQYINDNAKKPEIGQLIDKAMIAIEKENESLKGVLPKEYARPALD  122

Query  122  NSLLAGMLKSFTFS-DLTAGLQGDAFGRVFEYFLGEFARNEGSKGGEFYTPQSLVKLMVE  180
            +  L++++  FTF  + T + + D +GRV+EYF++ FA  EG ++GEFYTP S+VKL+VE
Sbjct  123  KEKLGDIIDLFTFKLGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVE  182

Query  181  IMEPFHGKIYDPACGSGGMFVQSARFVEQHQRSAADDLSVYGQEKTSETARLARMNLAIH  240
            ++EP+ G+IYDP CGSGGMFVQS RFVE+HQ +  DD+++YGQE  + T +LA+MNLAI+
Sbjct  183  MIEPYKGRIYDPCCGSGGMFVQSERFVEKHQ-GRLDDIAIYGQESNPTTWKLAKMNLAIR  241

Query  241  GLSGDI--KQGNTFYEDLHASPGKFDFAMANPPFNVKGVDKERISNDQKRLPYGTPSTDN  298
            G+  D+  ++++TF +DLH +  K D+ +ANPPFN  + ++ER+ +D ++  +G P+ +N
Sbjct  242  GIDNDLGERNADTFHNDLHKGL-KADYILANPPFNASDWGQERLLDDYRW-QFGVPPKGN  299

Query  299  ANYLWLQYIASSLNSGGRAGVVMANSASDARGSEQL-IRQRMIEDGVVDVMVATSSNLFY  357
            ANY W++ + S L + G AG V+AN++  + G ++L IR+ +IE+++V+ +V+ +++LFY
Sbjct  300  ANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFY  359

Query  358  TVTLPATLWFM--DKGKKG-TPREDTVLFIDARNTYQQVTRAIRELRDDQVELLANIVNL  414
            +  +P  LWF+  +KG++G   R + +LFIDAR+  + V+R+++E+ D++++ +A+  + 
Sbjct  360  STQIPVCLWFISNNKGQNGKKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHS  419

Query  415  YRGEADKLDDKHGTAAKMTELFPDGQYRDIAGLCKVATRAEIAAQGWSLNPGRYVGVEAR  474
             RG  DK                   Y DIAG+CKV    E+  +   L PGRYVG+   
Sbjct  420  WRGTNDKY------------------YEDIAGFCKVVNLEEVKNNEYILTPGRYVGLADV  461

Query  475  AADD  478
              D+
Sbjct  462  EEDE  465