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Homologs of unnamed gene of AF447814

DNA-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) EC55989_4655
( - )

NC_011748
(Escherichia coli 55989)

e-198

98.9

2) unnamed
( - )

NC_007384
(Shigella sonnei Ss046)

e-179

93.8

3) ROD_50161
( - )

NC_013716
(Citrobacter rodentium ICC168)

e-134

96.4

• Sequence Alignments

1) EC55989_4655 in NC_011748


>AF447814|42|G42|18265901|AAL67374.1|Escherichia_coli_CFT073|-|31385..31846|-|-|unknown 
          Length = 462

 Score = 689 bits (1778), Expect = e-198
 Identities = 353/357 (99%)
 Strand = Plus / Minus

Query: 24  tcatgcacggcgcaaaatccacgatgtatatatcagtaccaaaagcgcgacggcggaaga 83
           |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 462 tcatgcgcggcgcaaaatccacgatgtatatatcagtactaaaagcgcgacggcggaaga 403

Query: 84  agcactgaaactaatcggtgaactgtacgccattgagcacgaaatacgcgggttgccggt 143
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 agcactgaaactaatcggcgaactgtacgccattgagcacgaaatacgcgggttgccggt 343

Query: 144 gtctgaacgcctggcggtcaggcaaatgcagagtaaaccgctactgacttccctgtataa 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 gtctgaacgcctggcggtcaggcaaatgcagagtaaaccgctactgacttccctgtataa 283

Query: 204 gctgatgcaggagaaagaacacacgttatcgaaaaaatgccgtctgagagatgcgttccg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 gctgatgcaggagaaagaacacacgttatcgaaaaaatgccgtctgagagatgcgttccg 223

Query: 264 gtatatcaggaagcactgggttacgttgtgcaacttctgtgatgacggtctggcggaggc 323
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 222 gtatatcaggaagcactgggttgcgttgtgcaacttctgtgatgacggtctggcggaggc 163

Query: 324 ggacaataacacagcggaaagagcgcttcgtgcagtctgtctcggaaagaaaaattc 380
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 ggacaataacacagcggaaagagcgcttcgtgcagtctgtctcggaaagaaaaattc 106

2) unnamed in NC_007384


>AF447814|42|G42|18265901|AAL67374.1|Escherichia_coli_CFT073|-|31385..31846|-|-|unknown 
          Length = 462

 Score = 626 bits (1615), Expect = e-179
 Identities = 331/353 (94%)
 Strand = Plus / Minus

Query: 22  tcatgcgcgacgcaaaatccacgatgtatatatcagtactaaaagcgcgacggcggaaga 81
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 tcatgcgcggcgcaaaatccacgatgtatatatcagtactaaaagcgcgacggcggaaga 403

Query: 82  agctctgaaactaatcggtgaactgtacgccatagagcacgatatacgcgggttaccggt 141
           ||| |||||||||||||| |||||||||||||| |||||||| ||||||||||| |||||
Sbjct: 402 agcactgaaactaatcggcgaactgtacgccattgagcacgaaatacgcgggttgccggt 343

Query: 142 gtctgaacgcctggcggtcaggcaaatgcagagtagaccgctcctgacttccctgtataa 201
           ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 342 gtctgaacgcctggcggtcaggcaaatgcagagtaaaccgctactgacttccctgtataa 283

Query: 202 gctgatgcaggagaaagaacacacgttatcgaagaaatgtcgtctgggagatgcgttccg 261
           ||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||
Sbjct: 282 gctgatgcaggagaaagaacacacgttatcgaaaaaatgccgtctgagagatgcgttccg 223

Query: 262 gtatatcaggaagcactgggctgcgttgtgcaacttctgtgatgatggcctggctgaggt 321
           |||||||||||||||||||| |||||||||||||||||||||||| || ||||| |||| 
Sbjct: 222 gtatatcaggaagcactgggttgcgttgtgcaacttctgtgatgacggtctggcggaggc 163

Query: 322 agataataatgcagcagaaagagcgcttcgtgcagtctgtctcgggaagaaaa 374
            || |||||  |||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 162 ggacaataacacagcggaaagagcgcttcgtgcagtctgtctcggaaagaaaa 110

3) ROD_50161 in NC_013716


>AF447814|42|G42|18265901|AAL67374.1|Escherichia_coli_CFT073|-|31385..31846|-|-|unknown 
          Length = 462

 Score = 476 bits (1229), Expect = e-134
 Identities = 247/254 (97%)
 Strand = Plus / Minus

Query: 1   gaaatacgcgggttgccggtgtctgaacgcctggcggtcaggcaaatgcagagtaaaccg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gaaatacgcgggttgccggtgtctgaacgcctggcggtcaggcaaatgcagagtaaaccg 303

Query: 61  ctactgacttccctgtataagctgatgcaggagaaagaacacacattatcgaaaaaatgc 120
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 302 ctactgacttccctgtataagctgatgcaggagaaagaacacacgttatcgaaaaaatgc 243

Query: 121 cgtctgagagatgcgttccggtatatccggaagcactgggttgcgttgtgcaacttctgt 180
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 242 cgtctgagagatgcgttccggtatatcaggaagcactgggttgcgttgtgcaacttctgt 183

Query: 181 gatgatggtctggcggaggcggataataatgccgcggaaagagcgcttcgtgcagtctgt 240
           ||||| ||||||||||||||||| |||||  | |||||||||||||||||||||||||||
Sbjct: 182 gatgacggtctggcggaggcggacaataacacagcggaaagagcgcttcgtgcagtctgt 123

Query: 241 ctcggaaagaaaaa 254
           ||||||||||||||
Sbjct: 122 ctcggaaagaaaaa 109


 Score = 186 bits (481), Expect = 2e-47
 Identities = 98/104 (94%)
 Strand = Plus / Minus

Query: 260 tgttcttcggcagcgatcacggcggcgagcgaggagcactgttgtacgggctgatcggca 319
           |||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 104 tgttcttcggtagcgatcacggcggcgagcgtggtgcactgttgtacgggctgatcggca 45

Query: 320 cctgccgactgaacggtatcgatccggaagcgtatctgcgccat 363
           |||||||  |||| ||||||||||||||||||||||||||||||
Sbjct: 44  cctgccggttgaatggtatcgatccggaagcgtatctgcgccat 1