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Homologs of espF gene of AF022236

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) espF
( YP_002331392.1 )

LEE-encoded effector EspF

NC_011601
(Escherichia coli E2348/69)

2e-68

100

2) espF
( YP_003501856.1 )

espF

NC_013941
(Escherichia coli CB9615)

3e-62

3) espF
( NP_290250.1 )

hypothetical protein

NC_002655
(Escherichia coli EDL933)

7e-62

4) ECs4550
( NP_312577.1 )

protein EspF

NC_002695
(Escherichia coli Sakai)

7e-62

5) espF
( YP_003080462.1 )

LEE-encoded type III effector

NC_013008
(Escherichia coli TW14359)

7e-62

6) espF
( YP_003236070.1 )

T3SS secreted effector EspF

NC_013364
(Escherichia coli 11128)

2e-52

7) espF
( YP_003232171.1 )

T3SS effector EspF

NC_013361
(Escherichia coli 11368)

2e-43

8) CDCO157_4284
( YP_006315150.1 )

protein EspF

NC_017906
(Escherichia coli Xuzhou21)

1e-36

• Sequence Alignments

1) espF in NC_011601


> AF022236|42|G41|2865308|AAC38400.1|Escherichia_coli_E2348/69|+|34121..34741|espF|-|EspF
Length=206

 Score =  251 bits (937),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  1    MLNGISNAASTLGRQLVGIASRVSSAGGTGFSVAPQAVRLTPVRVHSPFSPGSSNVNART  60
            MLNGISNAASTLGRQLVGIASRVSSAGGTGFSVAPQAVRLTPVRVHSPFSPGSSNVNART
Sbjct  1    MLNGISNAASTLGRQLVGIASRVSSAGGTGFSVAPQAVRLTPVRVHSPFSPGSSNVNART  60

Query  61   IFNVSSQVtsftpsrpapppptsgqasgasRPLPPIAQALKDHLAAYELSKASETVNFKp  120
            IFNVSSQVTSFTPSRPAPPPPTSGQASGASRPLPPIAQALKDHLAAYELSKASETVNFKP
Sbjct  61   IFNVSSQVTSFTPSRPAPPPPTSGQASGASRPLPPIAQALKDHLAAYELSKASETVNFKP  120

Query  121  trpapppptsgqasgasRPLPPIAQALKDHLAAYELSKASETVSFKPTRQAPPPPTSGQA  180
            TRPAPPPPTSGQASGASRPLPPIAQALKDHLAAYELSKASETVSFKPTRQAPPPPTSGQA
Sbjct  121  TRPAPPPPTSGQASGASRPLPPIAQALKDHLAAYELSKASETVSFKPTRQAPPPPTSGQA  180

Query  181  SGPGGLPPLAQALKDHLAAYEQSKKG  206
            SGPGGLPPLAQALKDHLAAYEQSKKG
Sbjct  181  SGPGGLPPLAQALKDHLAAYEQSKKG  206

2) espF in NC_013941


> AF022236|42|G41|2865308|AAC38400.1|Escherichia_coli_E2348/69|+|34121..34741|espF|-|EspF
Length=206

 Score =  231 bits (860),  Expect = 3e-62, Method: Compositional matrix adjust.
 Identities = 180/205 (88%), Positives = 199/205 (98%), Gaps = 1/205 (0%)

Query  1    MLNGISNAASTLGRQLVGIASRVSSAGGTGFSVAPQAVRLTPVKVHSPFSPGSSNVNART  60
            MLNGISNAASTLGRQLVGIASRVSSAGGTGFSVAPQAVRLTPV+VHSPFSPGSSNVNART
Sbjct  1    MLNGISNAASTLGRQLVGIASRVSSAGGTGFSVAPQAVRLTPVRVHSPFSPGSSNVNART  60

Query  61   IFNVSSQVtsftpsrpapppptsgqasgasRPLPPIAQALKEHLAAYEKSKGPEALGFKP  120
            IFNVSSQVTSFTPSRPAPPPPTSGQASGASRPLPPIAQALK+HLAAYE SK++E++ FKP
Sbjct  61   IFNVSSQVTSFTPSRPAPPPPTSGQASGASRPLPPIAQALKDHLAAYELSKASETVNFKP  120

Query  121  ARQAPPPPTSGQASGASRPLPPIAQALKEHLAAYEKSKGPEALGFKPARQAPPPPTSGQA  180
            +R APPPPTSGQASGASRPLPPIAQALK+HLAAYE SK++E+++FKP+RQAPPPPTSGQA
Sbjct  121  TRPAPPPPTSGQASGASRPLPPIAQALKDHLAAYELSKASETVSFKPTRQAPPPPTSGQA  180

Query  181  SGASRPLPPIAQALKEHLAAYEKSK  205
            SG++  LPP+AQALK+HLAAYE+SK
Sbjct  181  SGPG-GLPPLAQALKDHLAAYEQSK  204


 Score =  151 bits (556),  Expect = 3e-38, Method: Compositional matrix adjust.
 Identities = 102/124 (83%), Positives = 118/124 (96%), Gaps = 1/124 (0%)

Query  131  GQASGASRPLPPIAQALKEHLAAYEKSKGPEALGFKPARQAPPPPTSGQASGASRPLPPI  190
            GQASGASRPLPPIAQALK+HLAAYE SK++E++ FKP+R APPPPTSGQASGASRPLPPI
Sbjct  84   GQASGASRPLPPIAQALKDHLAAYELSKASETVNFKPTRPAPPPPTSGQASGASRPLPPI  143

Query  191  AQALKEHLAAYEKSKGPEALGFKPARQAPPPPTSGQASGASRPLPPIAQALKDHLAAYEQ  250
            AQALK+HLAAYE SK++E+++FKP+RQAPPPPTSGQASG++  LPP+AQALKDHLAAYEQ
Sbjct  144  AQALKDHLAAYELSKASETVSFKPTRQAPPPPTSGQASGPG-GLPPLAQALKDHLAAYEQ  202

Query  251  SKKG  254
            SKKG
Sbjct  203  SKKG  206

3) espF in NC_002655


> AF022236|42|G41|2865308|AAC38400.1|Escherichia_coli_E2348/69|+|34121..34741|espF|-|EspF
Length=206

 Score =  229 bits (855),  Expect = 7e-62, Method: Compositional matrix adjust.
 Identities = 180/205 (88%), Positives = 199/205 (98%), Gaps = 1/205 (0%)

Query  1    MLNGISNAASTLGRQLVGIASRVSSAGGTGFSVAPQAVRLTPVKVHSPFSPGSSNVNART  60
            MLNGISNAASTLGRQLVGIASRVSSAGGTGFSVAPQAVRLTPV+VHSPFSPGSSNVNART
Sbjct  1    MLNGISNAASTLGRQLVGIASRVSSAGGTGFSVAPQAVRLTPVRVHSPFSPGSSNVNART  60

Query  61   IFNVSSQVtsftpsrpapppptsgqasgasRPLPPIAQALKEHLAAYEKSKGPEALGFKP  120
            IFNVSSQVTSFTPSRPAPPPPTSGQASGASRPLPPIAQALK+HLAAYE SK++E++ FKP
Sbjct  61   IFNVSSQVTSFTPSRPAPPPPTSGQASGASRPLPPIAQALKDHLAAYELSKASETVNFKP  120

Query  121  ARQAPPPPTSGQASGASRPLPPIAQALKEHLAAYEKSKGPEALGFKPARQAPPPPTSGQA  180
            +R APPPPTSGQASGASRPLPPIAQALK+HLAAYE SK++E+++FKP+RQAPPPPTSGQA
Sbjct  121  TRPAPPPPTSGQASGASRPLPPIAQALKDHLAAYELSKASETVSFKPTRQAPPPPTSGQA  180

Query  181  SGASRPLPPIAQALKEHLAAYEKSK  205
            SG++  LPP+AQALK+HLAAYE+SK
Sbjct  181  SGPG-GLPPLAQALKDHLAAYEQSK  204


 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 94/123 (77%), Positives = 109/123 (89%), Gaps = 5/123 (4%)

Query  131  GQASGASRPLPPIAQALKEHLAAYEKSKGPEALGFKPARQAPPPPTSGQASGASRPLPPI  190
            GQASGASRPLPPIAQALK+HLAAYE SK++E++ FKP+R APPPPTSGQASGASRPLPPI
Sbjct  84   GQASGASRPLPPIAQALKDHLAAYELSKASETVNFKPTRPAPPPPTSGQASGASRPLPPI  143

Query  191  AQALKEHLAAYEKSKGPEALGFKPARQApppptgpsglppl-----AQALKDHLAAYEQS  245
            AQALK+HLAAYE SK++E+++FKP+RQAPPPPT+  +  P      AQALKDHLAAYEQS
Sbjct  144  AQALKDHLAAYELSKASETVSFKPTRQAPPPPTSGQASGPGGLPPLAQALKDHLAAYEQS  203

Query  246  KKG  248
            KKG
Sbjct  204  KKG  206

4) ECs4550 in NC_002695


> AF022236|42|G41|2865308|AAC38400.1|Escherichia_coli_E2348/69|+|34121..34741|espF|-|EspF
Length=206

 Score =  229 bits (855),  Expect = 7e-62, Method: Compositional matrix adjust.
 Identities = 180/205 (88%), Positives = 199/205 (98%), Gaps = 1/205 (0%)

Query  1    MLNGISNAASTLGRQLVGIASRVSSAGGTGFSVAPQAVRLTPVKVHSPFSPGSSNVNART  60
            MLNGISNAASTLGRQLVGIASRVSSAGGTGFSVAPQAVRLTPV+VHSPFSPGSSNVNART
Sbjct  1    MLNGISNAASTLGRQLVGIASRVSSAGGTGFSVAPQAVRLTPVRVHSPFSPGSSNVNART  60

Query  61   IFNVSSQVtsftpsrpapppptsgqasgasRPLPPIAQALKEHLAAYEKSKGPEALGFKP  120
            IFNVSSQVTSFTPSRPAPPPPTSGQASGASRPLPPIAQALK+HLAAYE SK++E++ FKP
Sbjct  61   IFNVSSQVTSFTPSRPAPPPPTSGQASGASRPLPPIAQALKDHLAAYELSKASETVNFKP  120

Query  121  ARQAPPPPTSGQASGASRPLPPIAQALKEHLAAYEKSKGPEALGFKPARQAPPPPTSGQA  180
            +R APPPPTSGQASGASRPLPPIAQALK+HLAAYE SK++E+++FKP+RQAPPPPTSGQA
Sbjct  121  TRPAPPPPTSGQASGASRPLPPIAQALKDHLAAYELSKASETVSFKPTRQAPPPPTSGQA  180

Query  181  SGASRPLPPIAQALKEHLAAYEKSK  205
            SG++  LPP+AQALK+HLAAYE+SK
Sbjct  181  SGPG-GLPPLAQALKDHLAAYEQSK  204


 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 94/123 (77%), Positives = 109/123 (89%), Gaps = 5/123 (4%)

Query  131  GQASGASRPLPPIAQALKEHLAAYEKSKGPEALGFKPARQAPPPPTSGQASGASRPLPPI  190
            GQASGASRPLPPIAQALK+HLAAYE SK++E++ FKP+R APPPPTSGQASGASRPLPPI
Sbjct  84   GQASGASRPLPPIAQALKDHLAAYELSKASETVNFKPTRPAPPPPTSGQASGASRPLPPI  143

Query  191  AQALKEHLAAYEKSKGPEALGFKPARQApppptgpsglppl-----AQALKDHLAAYEQS  245
            AQALK+HLAAYE SK++E+++FKP+RQAPPPPT+  +  P      AQALKDHLAAYEQS
Sbjct  144  AQALKDHLAAYELSKASETVSFKPTRQAPPPPTSGQASGPGGLPPLAQALKDHLAAYEQS  203

Query  246  KKG  248
            KKG
Sbjct  204  KKG  206

5) espF in NC_013008


> AF022236|42|G41|2865308|AAC38400.1|Escherichia_coli_E2348/69|+|34121..34741|espF|-|EspF
Length=206

 Score =  229 bits (855),  Expect = 7e-62, Method: Compositional matrix adjust.
 Identities = 180/205 (88%), Positives = 199/205 (98%), Gaps = 1/205 (0%)

Query  1    MLNGISNAASTLGRQLVGIASRVSSAGGTGFSVAPQAVRLTPVKVHSPFSPGSSNVNART  60
            MLNGISNAASTLGRQLVGIASRVSSAGGTGFSVAPQAVRLTPV+VHSPFSPGSSNVNART
Sbjct  1    MLNGISNAASTLGRQLVGIASRVSSAGGTGFSVAPQAVRLTPVRVHSPFSPGSSNVNART  60

Query  61   IFNVSSQVtsftpsrpapppptsgqasgasRPLPPIAQALKEHLAAYEKSKGPEALGFKP  120
            IFNVSSQVTSFTPSRPAPPPPTSGQASGASRPLPPIAQALK+HLAAYE SK++E++ FKP
Sbjct  61   IFNVSSQVTSFTPSRPAPPPPTSGQASGASRPLPPIAQALKDHLAAYELSKASETVNFKP  120

Query  121  ARQAPPPPTSGQASGASRPLPPIAQALKEHLAAYEKSKGPEALGFKPARQAPPPPTSGQA  180
            +R APPPPTSGQASGASRPLPPIAQALK+HLAAYE SK++E+++FKP+RQAPPPPTSGQA
Sbjct  121  TRPAPPPPTSGQASGASRPLPPIAQALKDHLAAYELSKASETVSFKPTRQAPPPPTSGQA  180

Query  181  SGASRPLPPIAQALKEHLAAYEKSK  205
            SG++  LPP+AQALK+HLAAYE+SK
Sbjct  181  SGPG-GLPPLAQALKDHLAAYEQSK  204


 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 94/123 (77%), Positives = 109/123 (89%), Gaps = 5/123 (4%)

Query  131  GQASGASRPLPPIAQALKEHLAAYEKSKGPEALGFKPARQAPPPPTSGQASGASRPLPPI  190
            GQASGASRPLPPIAQALK+HLAAYE SK++E++ FKP+R APPPPTSGQASGASRPLPPI
Sbjct  84   GQASGASRPLPPIAQALKDHLAAYELSKASETVNFKPTRPAPPPPTSGQASGASRPLPPI  143

Query  191  AQALKEHLAAYEKSKGPEALGFKPARQApppptgpsglppl-----AQALKDHLAAYEQS  245
            AQALK+HLAAYE SK++E+++FKP+RQAPPPPT+  +  P      AQALKDHLAAYEQS
Sbjct  144  AQALKDHLAAYELSKASETVSFKPTRQAPPPPTSGQASGPGGLPPLAQALKDHLAAYEQS  203

Query  246  KKG  248
            KKG
Sbjct  204  KKG  206

6) espF in NC_013364


> AF022236|42|G41|2865308|AAC38400.1|Escherichia_coli_E2348/69|+|34121..34741|espF|-|EspF
Length=206

 Score =  198 bits (736),  Expect = 2e-52, Method: Compositional matrix adjust.
 Identities = 156/215 (73%), Positives = 174/215 (81%), Gaps = 12/215 (5%)

Query  1    MLNGISNAVSTIGLHLRGVASRVGSAGVSGFSVAPQTVRLTPVRFHSPFSPGSSNINART  60
            MLNGISNA ST+G +L G+ASRV+SAG +GFSVAPQ+VRLTPVR HSPFSPGSSN+NART
Sbjct  1    MLNGISNAASTLGRQLVGIASRVSSAGGTGFSVAPQAVRLTPVRVHSPFSPGSSNVNART  60

Query  61   TFNmshmsqmsqmsrmsqmatsftptrpapppptsgqasgsagLPPIAQALKDHLAAYEL  120
             FN+S        SR +  + +   +  A+ P           LPPIAQALKDHLAAYEL
Sbjct  61   IFNVSSQVTSFTPSRPAPPPPTSGQASGASRP-----------LPPIAQALKDHLAAYEL  109

Query  121  SKASETVSFKPTRQAPPPPTSGQASESG-GLPPIAQALKDHLAAYELSKASETVSFKPTR  179
            SKASETV+FKPTR APPPPTSGQAS ++  LPPIAQALKDHLAAYELSKASETVSFKPTR
Sbjct  110  SKASETVNFKPTRPAPPPPTSGQASGASRPLPPIAQALKDHLAAYELSKASETVSFKPTR  169

Query  180  QAPPPPTSGQASESGGLPPIAQALKDHLAAYELSK  214
            QAPPPPTSGQAS +GGLPP+AQALKDHLAAYE SK
Sbjct  170  QAPPPPTSGQASGPGGLPPLAQALKDHLAAYEQSK  204


 Score =  148 bits (546),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 119/141 (85%), Positives = 129/141 (92%), Gaps = 2/141 (1%)

Query  123  ASETVSFKPTRQAPPPPTSGQASESG-GLPPIAQALKDHLAAYELSKASETVSFKPTRQA  181
            +S+  SF P+R APPPPTSGQAS ++  LPPIAQALKDHLAAYELSKASETV+FKPTR A
Sbjct  65   SSQVTSFTPSRPAPPPPTSGQASGASRPLPPIAQALKDHLAAYELSKASETVNFKPTRPA  124

Query  182  PPPPTSGQASESG-GLPPIAQALKDHLAAYELSKASETVSFKPTRQAPPPPTSGQASESG  240
            PPPPTSGQAS ++  LPPIAQALKDHLAAYELSKASETVSFKPTRQAPPPPTSGQAS +G
Sbjct  125  PPPPTSGQASGASRPLPPIAQALKDHLAAYELSKASETVSFKPTRQAPPPPTSGQASGPG  184

Query  241  GLPPIAQALKDHLAAYEQSKK  261
            GLPP+AQALKDHLAAYEQSKK
Sbjct  185  GLPPLAQALKDHLAAYEQSKK  205

7) espF in NC_013361


> AF022236|42|G41|2865308|AAC38400.1|Escherichia_coli_E2348/69|+|34121..34741|espF|-|EspF
Length=206

 Score =  167 bits (619),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 159/207 (77%), Positives = 185/207 (90%), Gaps = 1/207 (0%)

Query  1    MLNGISQAVSTLGRHITSAASRVSSAGLSGFSVSPQAVRLNPIRAQSPFSPGTSNINART  60
            MLNGIS+A STLGR++ + ASRVSSAG +GFSV+PQAVRL P+R +SPFSPG+SN+NART
Sbjct  1    MLNGISNAASTLGRQLVGIASRVSSAGGTGFSVAPQAVRLTPVRVHSPFSPGSSNVNART  60

Query  61   TFNVsspatsftpsrpapppptsgqasgasRPLPPIAQALKDHLAAYEKSKSLDTsslkp  120
             FNVSS  TSFTPSRPAPPPPTSGQASGASRPLPPIAQALKDHLAAYE SK+ +T ++KP
Sbjct  61   IFNVSSQVTSFTPSRPAPPPPTSGQASGASRPLPPIAQALKDHLAAYELSKASETVNFKP  120

Query  121  srpapppptsGLVSGSSRSLPPIAQALKDHLAAYEKSKSLDTSGLKpsrpappppTSGQA  180
            +RPAPPPPTSG  SG+SR+LPPIAQALKDHLAAYE SK+ +T ++KP+R APPPPTSGQA
Sbjct  121  TRPAPPPPTSGQASGASRPLPPIAQALKDHLAAYELSKASETVSFKPTRQAPPPPTSGQA  180

Query  181  SEASRPLPPIAQALKDHLAAYELSKKA  207
            S ++  LPP+AQALKDHLAAYE SKK+
Sbjct  181  SGPG-GLPPLAQALKDHLAAYEQSKKG  206

8) CDCO157_4284 in NC_017906


> AF022236|42|G41|2865308|AAC38400.1|Escherichia_coli_E2348/69|+|34121..34741|espF|-|EspF
Length=206

 Score =  145 bits (534),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 133/158 (85%), Positives = 143/158 (91%), Gaps = 6/158 (3%)

Query  1    MLNGISNAASTLGRQLVGIASRVSSAGGTGFSVAPQAVRLTPVKVHSPFSPGSSNVNART  60
            MLNGISNAASTLGRQLVGIASRVSSAGGTGFSVAPQAVRLTPV+VHSPFSPGSSNVNART
Sbjct  1    MLNGISNAASTLGRQLVGIASRVSSAGGTGFSVAPQAVRLTPVRVHSPFSPGSSNVNART  60

Query  61   IFNVSSQVtsftpsrpapppptsgqasgasRPLPPIAQALKEHLAAYEKSKGPEALGFKP  120
            IFNVSSQVTSFTPSRPAPPPPTSGQASGASRPLPPIAQALK+HLAAYE SK++E++ FKP
Sbjct  61   IFNVSSQVTSFTPSRPAPPPPTSGQASGASRPLPPIAQALKDHLAAYELSKASETVNFKP  120

Query  121  ARQApppptgpsglppl------AQALKDHLAAYEQSK  152
            +R APPPPT+  +  +       AQALKDHLAAYE SK
Sbjct  121  TRPAPPPPTSGQASGASRPLPPIAQALKDHLAAYELSK  158


 Score = 70.5 bits (248),  Expect = 5e-14, Method: Compositional matrix adjust.
 Identities = 49/69 (72%), Positives = 58/69 (85%), Gaps = 5/69 (7%)

Query  91   RPLPPIAQALKEHLAAYEKSKGPEALGFKPARQApppptgpsglppl-----AQALKDHL  145
            RPLPPIAQALK+HLAAYE SK++E+++FKP+RQAPPPPT+  +  P      AQALKDHL
Sbjct  138  RPLPPIAQALKDHLAAYELSKASETVSFKPTRQAPPPPTSGQASGPGGLPPLAQALKDHL  197

Query  146  AAYEQSKKG  154
            AAYEQSKKG
Sbjct  198  AAYEQSKKG  206