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Homologs of hrcR gene of NC_004578_P1

287

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) hrcR
( NP_791222.3 )

type III secretion protein HrcR

NC_004578
(Pseudomonas syringae DC3000)

6e-86

100

2) hrcR
( YP_273544.2 )

type III secretion system protein

NC_005773
(Pseudomonas syringae 1448A)

1e-81

3) HrcR
( YP_234300.1 )

type III secretion system protein

NC_007005
(Pseudomonas syringae B728a)

4e-81

4) Pmen_0046
( YP_001185552.1 )

type III secretion system protein

NC_009439
(Pseudomonas mendocina ymp)

2e-73

5) PSEBR_a5382
( YP_004356892.1 )

type III secretion protein

NC_015379
(Pseudomonas brassicacearum NFM421)

6e-69

6) hrcR
( YP_005210969.1 )

protein HrcR

NC_016830
(Pseudomonas fluorescens F113)

1e-68

7) hcrR
( YP_005804091.1 )

Harpin secretion protein HrcR

NC_017390
(Erwinia pyrifoliae DSM 12163)

5e-67

8) hrcR
( YP_002650074.1 )

type III secretion system protein

NC_012214
(Erwinia pyrifoliae Ep1/96)

5e-67

9) hrcR
( YP_005818255.1 )

type III secretion system protein

NC_017445
(Erwinia sp. Ejp617)

5e-67

10) hrcR
( YP_001906463.1 )

type III secretion system protein

NC_010694
(Erwinia tasmaniensis Et1/99)

1e-66

11) hrcR
( YP_003539968.1 )

type III secretion system protein

NC_013971
(Erwinia amylovora ATCC 49946)

6e-67

12) hcrR
( YP_003529886.1 )

Harpin secretion protein HrcR

NC_013961
(Erwinia amylovora CFBP1430)

6e-67

13) Marme_1071
( YP_004312182.1 )

Yop virulence translocation R

NC_015276
(Marinomonas mediterranea MMB-1)

2e-64

14) hrcR
( YP_050174.1 )

type III secretion system protein

NC_004547
(Pectobacterium atrosepticum SCRI1043)

2e-63

15) H045_00190
( YP_007395610.1 )

type III secretion system protein YscR

NC_020209
(Pseudomonas poae RE*1-1-14)

4e-63

16) PC1_2212
( YP_003017787.1 )

Yop virulence translocation R

NC_012917
(Pectobacterium carotovorum PC1)

5e-63

17) PCC21_022910
( YP_006646947.1 )

type III secretion system protein

NC_018525
(Pectobacterium carotovorum PCC21)

5e-63

18) rscR
( YP_002870380.1 )

type III secretion system protein

NC_012660
(Pseudomonas fluorescens SBW25)

7e-63

19) D781_3938
( YP_007346313.1 )

type III secretion apparatus protein, YscR/HrcR family

NC_020064
(Serratia marcescens FGI94)

1e-62

20) Ser39006_2919
( YP_008523301.1 )

Yop virulence translocation R

NC_022268
(Serratia sp. ATCC 39006)

2e-62

21) hrcR
( YP_003883246.1 )

type III secretion inner membrane protein

NC_014500
(Dickeya dadantii 3937)

2e-62

22) Dd1591_1885
( YP_003004214.1 )

type III secretion system protein

NC_012912
(Dickeya zeae Ech1591)

9e-62

23) rscR
( YP_006322231.1 )

type III secretion protein RscR

NC_017911
(Pseudomonas fluorescens A506)

8e-61

24) Dd586_1882
( YP_003333446.1 )

Yop virulence translocation R

NC_013592
(Dickeya dadantii Ech586)

1e-60

25) H650_14845
( YP_008108769.1 )

hypothetical protein

NC_021500
(Enterobacter sp. R4-368)

8e-49

26) yscR
( YP_436217.1 )

type III secretion system protein

NC_007645
(Hahella chejuensis KCTC 2396)

8e-43

27) hrcR
( YP_003774221.1 )

type III secretion HrcR transmembrane protein

NC_014323
(Herbaspirillum seropedicae SmR1)

2e-42

28) yscR
( YP_004677245.1 )

Yop proteins translocation protein R

NC_015717
(Hyphomicrobium sp. MC1)

8e-41

29) HCH_03263
( YP_434447.1 )

type III secretion system protein

NC_007645
(Hahella chejuensis KCTC 2396)

3e-39

30) escR
( NP_902277.1 )

type III secretion system protein

NC_005085
(Chromobacterium violaceum ATCC 12472)

1e-38

31) bscR
( YP_006899833.1 )

type III secretion protein

NC_018829
(Bordetella bronchiseptica MO149)

2e-38

32) bscR
( YP_006625537.1 )

type III secretion protein

NC_018518
(Bordetella pertussis 18323)

2e-38

33) bscR
( YP_005590274.1 )

type III secretion system protein

NC_017223
(Bordetella pertussis CS)

2e-38

34) bscR
( NP_880884.1 )

type III secretion system protein

NC_002929
(Bordetella pertussis Tohama I)

2e-38

35) bscR
( YP_006967888.1 )

type III secretion protein

NC_019382
(Bordetella bronchiseptica 253)

5e-38

36) bscR
( NP_888177.1 )

type III secretion system protein

NC_002927
(Bordetella bronchiseptica RB50)

5e-38

37) bscR
( NP_884486.1 )

type III secretion system protein

NC_002928
(Bordetella parapertussis 12822)

5e-38

38) bscR
( YP_006895376.1 )

type III secretion protein

NC_018828
(Bordetella parapertussis Bpp5)

5e-38

39) C770_GR4pC1264
( YP_007193547.1 )

type III secretion apparatus protein, YscR/HrcR family

NC_019848
(Sinorhizobium meliloti GR4)

5e-38

40) SFHH103_04957
( YP_005191562.1 )

RhcR-like, type III secretion system

NC_016815
(Sinorhizobium fredii HH103)

8e-38

41) rhcR
( YP_002824496.1 )

type III secretion system protein

NC_012586
(Sinorhizobium fredii NGR234)

9e-38

42) USDA257_c21640
( YP_006397503.1 )

translocation protein y4yL

NC_018000
(Sinorhizobium fredii USDA 257)

2e-37

43) NH44784_014541
( YP_008028549.1 )

Type III secretion inner membrane protein (YscR,SpaR,HrcR,EscR,homologous to flagellar export components

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

4e-37

44) DvMF_2439
( YP_002436848.1 )

type III secretion system protein

NC_011769
(Desulfovibrio vulgaris Miyazaki F)

1e-36

45) ascR
( YP_001144302.1 )

type III secretion system protein

NC_009350
(Aeromonas salmonicida A449)

2e-36

46) ETAC_04225
( YP_007628336.1 )

type III secretion system protein YscR

NC_020796
(Edwardsiella tarda C07-087)

2e-36

47) esaR
( YP_003294936.1 )

type three secretion apparatus protein R

NC_013508
(Edwardsiella tarda EIB202)

2e-36

48) esaR
( YP_005698435.1 )

protein EsaR

NC_017309
(Edwardsiella tarda FL6-60)

2e-36

49) PADK2_17235
( YP_006483428.1 )

type III secretion system protein YscR

NC_018080
(Pseudomonas aeruginosa DK2)

2e-36

50) pscR
( YP_005975938.1 )

type III secretion system protein

NC_017548
(Pseudomonas aeruginosa M18)

2e-36

51) pscR
( YP_005980835.1 )

type III secretion system protein

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

2e-36

52) pscR
( NP_250384.1 )

type III secretion system protein

NC_002516
(Pseudomonas aeruginosa PAO1)

2e-36

53) ssaR
( YP_008132244.1 )

flagellar biosynthesis protein FliP

NC_021577
(Pseudomonas aeruginosa RP73)

2e-36

54) pscR
( YP_791552.1 )

type III secretion system protein

NC_008463
(Pseudomonas aeruginosa UCBPP-PA14)

2e-36

55) G655_16715
( YP_007710183.1 )

type III secretion system protein YscR

NC_020912
(Pseudomonas aeruginosa B136-33)

3e-36

56) SVI_2230
( YP_003556979.1 )

type III secretion system EscR protein

NC_014012
(Shewanella violacea DSS12)

3e-36

57) Sbal175_2391
( YP_006020948.1 )

Yop virulence translocation R

NC_017571
(Shewanella baltica BA175)

4e-36

58) Sbal117_2090
( YP_006037321.1 )

Yop virulence translocation R

NC_017579
(Shewanella baltica OS117)

4e-36

59) Sbal_1974
( YP_001050347.1 )

type III secretion system protein

NC_009052
(Shewanella baltica OS155)

4e-36

60) Sbal195_2278
( YP_001554706.1 )

type III secretion system protein

NC_009997
(Shewanella baltica OS195)

4e-36

61) Sbal678_2288
( YP_005273495.1 )

Yop virulence translocation R

NC_016901
(Shewanella baltica OS678)

4e-36

62) RHE_PD00059
( NP_659978.1 )

type III secretion system protein

NC_004041
(Rhizobium etli CFN 42)

9e-36

63) hrcR
( YP_001984354.1 )

type III secretion system protein

NC_010996
(Rhizobium etli CIAT 652)

9e-36

64) Y11_35451
( YP_006007044.1 )

type III secretion inner membrane protein

NC_017564
(Yersinia enterocolitica Y11)

2e-35

65) yscR
( NP_995367.1 )

type III secretion system protein

NC_005813
(Yersinia pestis 91001)

2e-35

66) yscR
( YP_001604476.1 )

type III secretion system protein

NC_010157
(Yersinia pestis Angola)

2e-35

67) YPA_CD0018
( YP_636810.1 )

type III secretion system protein

NC_008122
(Yersinia pestis Antiqua)

2e-35

68) yscR
( NP_395178.1 )

type III secretion system protein

NC_003131
(Yersinia pestis CO92)

2e-35

69) yscR
( YP_005503177.1 )

needle complex export protein

NC_017153
(Yersinia pestis D106004)

2e-35

70) yscR
( YP_005506960.1 )

needle complex export protein

NC_017157
(Yersinia pestis D182038)

2e-35

71) YPDSF_3973
( YP_001154602.1 )

type III secretion system protein

NC_009377
(Yersinia pestis Pestoides F)

2e-35

72) yscR
( YP_003560536.1 )

needle complex export protein

NC_014017
(Yersinia pestis Z176003)

2e-35

73) pYV0071
( YP_068480.1 )

type III secretion system protein

NC_006153
(Yersinia pseudotuberculosis IP 32953)

2e-35

74) YPTS_4289
( YP_001874689.1 )

type III secretion system protein

NC_010635
(Yersinia pseudotuberculosis PB1/+)

2e-35

75) YE105_P0026
( YP_004424928.1 )

type III secretion system protein

NC_015475
(Yersinia enterocolitica 105.5R(r))

3e-35

76) yscR
( YP_001004082.1 )

type III secretion system protein

NC_008791
(Yersinia enterocolitica 8081)

3e-35

77) Y11_p0741
( YP_006007922.1 )

type III secretion inner membrane protein

NC_017565
(Yersinia enterocolitica Y11)

3e-35

78) S58_72190
( YP_007516770.1 )

type III secretion system protein YscR

NC_020453
(Bradyrhizobium oligotrophicum S58)

3e-35

79) sctR
( NP_930977.1 )

type III secretion system protein

NC_005126
(Photorhabdus luminescens TTO1)

4e-35

80) Dvul_2984
( YP_961183.1 )

type III secretion system protein

NC_008741
(Desulfovibrio vulgaris DP4)

5e-35

81) DVUA0122
( YP_009162.1 )

type III secretion system protein

NC_005863
(Desulfovibrio vulgaris Hildenborough)

5e-35

82) Deval_3224
( YP_005704003.1 )

Yop virulence translocation R

NC_017311
(Desulfovibrio vulgaris RCH1)

5e-35

83) rhcR
( NP_768459.1 )

type III secretion system protein

NC_004463
(Bradyrhizobium japonicum USDA 110)

5e-35

84) rhcR
( YP_005612838.1 )

RhcR protein

NC_017249
(Bradyrhizobium japonicum USDA 6)

5e-35

85) YE105_C0338
( YP_004296539.1 )

type III secretion apparatus protein, YscR/HrcR family

NC_015224
(Yersinia enterocolitica 105.5R(r))

6e-35

86) fliP1
( NP_991819.2 )

type III secretion system protein

NC_005810
(Yersinia pestis 91001)

8e-35

87) A1122_03785
( YP_005520452.1 )

type III secretion system protein YscR

NC_017168
(Yersinia pestis A1122)

8e-35

88) epaP
( YP_001608228.1 )

type III secretion system protein

NC_010159
(Yersinia pestis Angola)

8e-35

89) YPA_4012
( YP_653918.1 )

type III secretion system protein

NC_008150
(Yersinia pestis Antiqua)

8e-35

90) YPO0270
( YP_002345352.1 )

type III secretion system protein

NC_003143
(Yersinia pestis CO92)

8e-35

91) YPD4_0235
( YP_005503447.1 )

putative type III secretion apparatus protein

NC_017154
(Yersinia pestis D106004)

8e-35

92) YPD8_0240
( YP_005507323.1 )

putative type III secretion apparatus protein

NC_017160
(Yersinia pestis D182038)

8e-35

93) y0530
( NP_667867.1 )

type III secretion system protein

NC_004088
(Yersinia pestis KIM)

8e-35

94) YPN_3397
( YP_649324.1 )

type III secretion system protein

NC_008149
(Yersinia pestis Nepal516)

8e-35

95) YPDSF_3700
( YP_001165023.1 )

type III secretion system protein

NC_009381
(Yersinia pestis Pestoides F)

8e-35

96) YPZ3_0233
( YP_003566405.1 )

putative type III secretion apparatus protein

NC_014029
(Yersinia pestis Z176003)

8e-35

97) epaP
( YP_001402768.1 )

type III secretion system protein

NC_009708
(Yersinia pseudotuberculosis IP 31758)

8e-35

98) YPTB0327
( YP_068873.2 )

type III secretion system protein

NC_006155
(Yersinia pseudotuberculosis IP 32953)

8e-35

99) YPTS_0351
( YP_001870797.1 )

type III secretion system protein

NC_010634
(Yersinia pseudotuberculosis PB1/+)

8e-35

100) YPK_3902
( YP_001722620.1 )

type III secretion system protein

NC_010465
(Yersinia pseudotuberculosis YPIII)

8e-35

101) pscR
( YP_002441218.1 )

type III secretion system protein

NC_011770
(Pseudomonas aeruginosa LESB58)

1e-34

102) sctR
( YP_003039885.1 )

type iii secretion component protein sctr

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

2e-34

103) ECs4583
( NP_312610.1 )

type III secretion system protein

NC_002695
(Escherichia coli Sakai)

2e-34

104) escR
( YP_003236103.1 )

T3SS structure protein EscR

NC_013364
(Escherichia coli 11128)

3e-34

105) escR
( YP_003501889.1 )

type III secretion system EscR protein

NC_013941
(Escherichia coli CB9615)

3e-34

106) escR
( YP_002331425.1 )

type III secretion system protein

NC_011601
(Escherichia coli E2348/69)

3e-34

107) epaP
( YP_002273179.1 )

type III secretion system protein

NC_011353
(Escherichia coli EC4115)

3e-34

108) escR
( NP_290283.1 )

type III secretion system protein

NC_002655
(Escherichia coli EDL933)

3e-34

109) ECO55CA74_21290
( YP_006161363.1 )

type III secretion system protein YscR

NC_017656
(Escherichia coli RM12579)

3e-34

110) escR
( YP_003080495.1 )

type III secretion system protein

NC_013008
(Escherichia coli TW14359)

3e-34

111) CDCO157_4318
( YP_006315183.1 )

type III secretion system protein

NC_017906
(Escherichia coli Xuzhou21)

3e-34

112) escR
( YP_003232138.1 )

type III secretion system protein

NC_013361
(Escherichia coli 11368)

4e-34

113) escR
( YP_003223490.1 )

T3SS structure protein EscR

NC_013353
(Escherichia coli 12009)

4e-34

114) sctR
( YP_007365636.1 )

type III secretion system protein

NC_020127
(Lawsonia intracellularis N343)

5e-34

115) SctR
( YP_594912.1 )

type III secretion system protein

NC_008011
(Lawsonia intracellularis PHE/MN1-00)

5e-34

116) PSPPH_2535
( YP_274731.1 )

type III secretion system protein

NC_005773
(Pseudomonas syringae 1448A)

7e-34

117) C770_GR4pB210
( YP_007192280.1 )

Type III secretory pathway, component EscR

NC_019847
(Sinorhizobium meliloti GR4)

1e-33

118) F504_4358
( YP_008238087.1 )

Type III secretion inner membrane protein (YscR)

NC_021745
(Ralstonia solanacearum FQY_4)

7e-34

119) hrcR
( NP_522421.1 )

type III secretion system protein

NC_003296
(Ralstonia solanacearum GMI1000)

7e-34

120) spaP
( YP_006216510.1 )

type III secretion system protein SpaP

NC_017731
(Providencia stuartii MRSN 2154)

9e-34

121) Aave_0449
( YP_968830.1 )

type III secretion system protein

NC_008752
(Acidovorax citrulli AAC00-1)

2e-33

122) Acav_0515
( YP_004233005.1 )

Yop virulence translocation R

NC_015138
(Acidovorax avenae ATCC 19860)

2e-33

123) Meso_0110
( YP_672680.1 )

type III secretion system protein

NC_008254
(Chelativorans sp. BNC1)

2e-33

124) yscR
( YP_005082209.1 )

Yop proteins translocation protein R

NC_016642
(Pseudovibrio sp. FO-BEG1)

3e-33

125) escR
( YP_003366517.1 )

T3SS structural protein EscR

NC_013716
(Citrobacter rodentium ICC168)

3e-33

126) mlr8766
( NP_106869.1 )

type III secretion system protein

NC_002678
(Mesorhizobium loti MAFF303099)

4e-33

127) hrcR
( YP_003749779.1 )

Hypersensitivity response secretion protein hrcR, type III secretion system

NC_014310
(Ralstonia solanacearum PSI07)

6e-33

128) SFHH103_04305
( YP_006575326.1 )

hypothetical protein

NC_018294
(Sinorhizobium fredii HH103)

7e-33

129) USDA257_p02850
( YP_006529157.1 )

putative translocation protein y4yL

NC_018179
(Sinorhizobium fredii USDA 257)

7e-33

130) REMIM1_PE00285
( YP_008368039.1 )

type III secretion system FliP/YscR family protein

NC_021909
(Rhizobium etli Mim1)

9e-33

131) rhcR
( NP_444164.1 )

type III secretion system protein

NC_000914
(Sinorhizobium fredii NGR234)

1e-32

132) hrcR
( YP_006032351.1 )

hrp protein hrcr

NC_017575
(Ralstonia solanacearum Po82)

1e-32

133) NT01EI_0960
( YP_002932408.1 )

type III secretion apparatus protein, YscR/HrcR family, putative

NC_012779
(Edwardsiella ictaluri 93-146)

7e-31

134) SARI_01563
( YP_001570599.1 )

type III secretion system protein

NC_010067
(Salmonella enterica RSK2980)

7e-31

135) SG1305
( YP_454985.1 )

type III secretion system protein

NC_007712
(Sodalis glossinidius morsitans)

2e-30

136) epaP
( YP_002146623.1 )

type III secretion system protein

NC_011149
(Salmonella enterica SL483)

3e-30

137) STAUR_3046
( YP_003952665.1 )

type III secretion system inner membrane p family protein

NC_014623
(Stigmatella aurantiaca DW4/3-1)

4e-30

138) ssaR
( YP_008265618.1 )

flagellar biosynthesis protein FliP

NC_021820
(Salmonella enterica 08-1736)

4e-30

139) ssaR
( YP_005237289.1 )

type III secretion system protein

NC_016856
(Salmonella enterica 14028S)

4e-30

140) SEEH1578_16330
( YP_008247325.1 )

type III secretion system protein YscR

NC_021810
(Salmonella enterica 41578)

4e-30

141) yscR
( YP_005396816.1 )

type III secretion protein

NC_017046
(Salmonella enterica 798)

4e-30

142) SSPA1332
( YP_002142171.1 )

type III secretion system protein

NC_011147
(Salmonella enterica AKU12601)

4e-30

143) yscR
( YP_150685.1 )

type III secretion protein

NC_006511
(Salmonella enterica ATCC 9150)

4e-30

144) SU5_02035
( YP_006087669.1 )

Type III secretion inner membrane protein

NC_017623
(Salmonella enterica B182)

4e-30

145) ssaR
( YP_008255384.1 )

flagellar biosynthesis protein FliP

NC_021814
(Salmonella enterica CFSAN001921)

4e-30

146) CFSAN001992_04495
( YP_007470657.1 )

type III secretion system protein YscR

NC_020307
(Salmonella enterica CFSAN001992)

4e-30

147) ssaR
( YP_008260609.1 )

flagellar biosynthesis protein FliP

NC_021818
(Salmonella enterica CFSAN002050)

4e-30

148) ssaR
( YP_008249241.1 )

flagellar biosynthesis protein FliP

NC_021812
(Salmonella enterica CFSAN002069)

4e-30

149) epaP
( YP_002215713.1 )

type III secretion system protein

NC_011205
(Salmonella enterica CT_02021853)

4e-30

150) epaP
( YP_002114432.1 )

type III secretion system protein

NC_011094
(Salmonella enterica CVM19633)

4e-30

151) STMMW_14241
( YP_005232478.1 )

putative type III secretion protein

NC_016854
(Salmonella enterica D23580)

4e-30

152) ssaR
( NP_460384.1 )

type III secretion system protein

NC_003197
(Salmonella enterica LT2)

4e-30

153) yscR
( YP_002637868.1 )

type III secretion system protein

NC_012125
(Salmonella enterica RKS4594)

4e-30

154) ssaR
( YP_216427.1 )

type III secretion system protein

NC_006905
(Salmonella enterica SC-B67)

4e-30

155) SPAB_01906
( YP_001588129.1 )

type III secretion system protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

4e-30

156) yscR
( YP_005181263.1 )

putative type III secretion protein

NC_016810
(Salmonella enterica SL1344)

4e-30

157) epaP
( YP_002045422.1 )

type III secretion system protein

NC_011083
(Salmonella enterica SL476)

4e-30

158) ssaR
( YP_005242320.1 )

type III secretion system protein

NC_016857
(Salmonella enterica ST4/74)

4e-30

159) STMDT12_C14350
( YP_005247131.1 )

type III secretion system protein

NC_016860
(Salmonella enterica T000240)

4e-30

160) STU288_03415
( YP_007901788.1 )

type III secretion system protein YscR

NC_021151
(Salmonella enterica U288)

4e-30

161) ssaR
( YP_005251923.1 )

type III secretion system protein

NC_016863
(Salmonella enterica UK-1)

4e-30

162) LILAB_35715
( YP_004670102.1 )

type III secretion system protein

NC_015711
(Myxococcus fulvus HW-1)

5e-30

163) yscR
( NP_456109.1 )

putative type III secretion protein

NC_003198
(Salmonella enterica CT18)

5e-30

164) STBHUCCB_13770
( YP_005216935.1 )

hypothetical protein

NC_016832
(Salmonella enterica P-stx-12)

5e-30

165) yscR
( NP_805090.1 )

type III secretion system protein

NC_004631
(Salmonella enterica Ty2)

5e-30

166) TY21A_06540
( YP_007925612.1 )

type III secretion system protein

NC_021176
(Salmonella enterica Ty21a)

5e-30

167) ssaR
( YP_002226666.1 )

type III secretion system protein

NC_011274
(Salmonella enterica 287/91)

6e-30

168) SBOV14161
( YP_008505286.1 )

type III secretion apparatus protein, YscR/HrcR family

NC_022241
(Salmonella enterica 3114)

6e-30

169) ssaR
( YP_008480906.1 )

putative type III secretion protein

NC_022221
(Salmonella enterica CDC1983-67)

6e-30

170) ssaR
( YP_008308803.1 )

flagellar biosynthesis protein FliP

NC_021844
(Salmonella enterica CFSAN000189)

6e-30

171) ssaR
( YP_002243726.1 )

type III secretion system protein

NC_011294
(Salmonella enterica P125109)

6e-30

172) ssaR
( YP_005212444.1 )

putative type III secretion protein

NC_016831
(Salmonella enterica RKS5078)

6e-30

173) ssaR
( YP_008380650.1 )

flagellar biosynthesis protein FliP

NC_021984
(Salmonella enterica S06004)

6e-30

174) epaP
( YP_002040671.1 )

type III secretion system protein

NC_011080
(Salmonella enterica SL254)

6e-30

175) SN31241_24890
( YP_008360405.1 )

Virulence protein yscR

NC_021902
(Salmonella enterica USMARC-S3124.1)

6e-30

176) XC_3016
( YP_244084.1 )

type III secretion system protein

NC_007086
(Xanthomonas campestris 8004)

7e-30

177) hrcR
( NP_636600.1 )

type III secretion system protein

NC_003902
(Xanthomonas campestris ATCC 33913)

7e-30

178) xccb100_3079
( YP_001904484.1 )

type III secretion system protein

NC_010688
(Xanthomonas campestris B100)

7e-30

179) XOO_0095
( YP_449124.1 )

type III secretion system protein

NC_007705
(Xanthomonas oryzae MAFF 311018)

7e-30

180) epaP
( YP_001911274.1 )

type III secretion system protein

NC_010717
(Xanthomonas oryzae PXO99A)

7e-30

181) hrcR
( NP_640757.1 )

type III secretion system protein

NC_003919
(Xanthomonas axonopodis 306)

8e-30

182) hrcR
( YP_004849999.1 )

type III secretion system protein

NC_016010
(Xanthomonas axonopodis F1)

8e-30

183) XAC29_02060
( YP_007634905.1 )

type III secretion system protein YscR

NC_020800
(Xanthomonas axonopodis Xac29-1)

8e-30

184) hrcR
( YP_005636495.1 )

type III secretion protein HrcR

NC_017271
(Xanthomonas campestris 756C)

8e-30

185) hrcR
( YP_362153.1 )

type III secretion system protein

NC_007508
(Xanthomonas campestris 85-10)

8e-30

186) hrcR
( YP_007648827.1 )

HrcR protein

NC_020815
(Xanthomonas citri Aw12879)

8e-30

187) hrcR
( YP_198720.1 )

type III secretion system protein

NC_006834
(Xanthomonas oryzae KACC10331)

8e-30

188) hrcR
( YP_005630680.1 )

type III secretion protein HrcR

NC_017267
(Xanthomonas oryzae BLS256)

9e-30

189) MXAN_5647
( YP_633786.1 )

type III secretion system protein

NC_008095
(Myxococcus xanthus DK 1622)

1e-29

190) ssaR
( YP_002924940.1 )

type III secretion system protein

NC_012751
(Candidatus Hamiltonella defensa T5A)

3e-28

191) JCM7686_1775
( YP_008404643.1 )

type III secretion protein

NC_022041
(Paracoccus aminophilus JCM 7686)

2e-27

192) fliP1
( YP_005372092.1 )

type III secretion system protein

NC_017030
(Corallococcus coralloides DSM 2259)

4e-27

193) MYSTI_06240
( YP_007363197.1 )

type III secretion system protein

NC_020126
(Myxococcus stipitatus DSM 14675)

7e-27

194) CK3_11030
( YP_007823328.1 )

flagellar biosynthetic protein FliP

NC_021035
(butyrate-producing bacterium SS3/4)

7e-27

195) Atc_1493
( YP_004748842.1 )

flagellar biosynthesis protein fliP

NC_015850
(Acidithiobacillus caldus SM-1)

2e-25

196) lfiP
( YP_003363875.1 )

flagellar export/assembly protein

NC_013716
(Citrobacter rodentium ICC168)

2e-25

197) fliP
( YP_001742352.1 )

flagellar biosynthesis protein FliP

NC_010498
(Escherichia coli SMS-3-5)

1e-24

198) lfiP
( YP_003232796.1 )

putative lateral flagellar biosynthesis protein

NC_013364
(Escherichia coli 11128)

1e-24

199) fliP
( YP_003227339.1 )

flagellar biosynthesis protein FliP

NC_013361
(Escherichia coli 11368)

1e-24

200) EKO11_3667
( YP_005279305.1 )

flagellar biosynthetic protein FliP

NC_016902
(Escherichia coli KO11FL)

1e-24

201) fliP2
( YP_006162587.1 )

flagellar biosynthesis protein FliP

NC_017660
(Escherichia coli KO11FL)

1e-24

202) fliP
( YP_008563399.1 )

flagellar biosynthesis protein FliP

NC_022364
(Escherichia coli LY180)

1e-24

203) lfiP
( YP_006123038.1 )

lateral flagellar export/assembly protein

NC_017635
(Escherichia coli W)

1e-24

204) fliP2
( YP_006171701.1 )

flagellar biosynthesis protein FliP

NC_017664
(Escherichia coli W)

1e-24

205) fliP
( YP_001726333.1 )

flagellar biosynthesis protein FliP

NC_010468
(Escherichia coli ATCC 8739)

1e-24

206) lfiP
( YP_006094582.1 )

lateral flagellar export/assembly protein (FliP-like)

NC_017626
(Escherichia coli 042)

2e-24

207) fliP
( YP_002411025.1 )

flagellar biosynthesis protein FliP

NC_011751
(Escherichia coli UMN026)

2e-24

208) lfiP
( YP_006167277.1 )

Flagellar biosynthetic protein FliP

NC_017663
(Escherichia coli P12b)

2e-24

209) fliP
( YP_005093325.1 )

flagellar biosynthesis protein FliP

NC_016745
(Oceanimonas sp. GK1)

2e-24

210) fliP1
( YP_006137309.1 )

Flagellar biosynthesis protein

NC_017644
(Escherichia coli NA114)

5e-24

211) fliP
( YP_002796342.1 )

flagellar biosynthesis protein FliP

NC_012559
(Laribacter hongkongensis HLHK9)

1e-23

212) YE105_C3298
( YP_004299495.1 )

lateral flagellar export/assembly protein

NC_015224
(Yersinia enterocolitica 105.5R(r))

1e-23

213) fliP
( YP_001399618.1 )

flagellar biosynthesis protein FliP

NC_009708
(Yersinia pseudotuberculosis IP 31758)

1e-23

214) fliP
( NP_970074.1 )

flagellar biosynthesis protein FliP

NC_005363
(Bdellovibrio bacteriovorus HD100)

9e-24

215) fliP
( YP_007024188.1 )

flagellar biosynthesis protein FliP

NC_019567
(Bdellovibrio bacteriovorus Tiberius)

9e-24

216) fliP
( NP_994319.1 )

flagellar biosynthesis protein FliP

NC_005810
(Yersinia pestis 91001)

4e-23

217) fliP
( YP_005520003.1 )

flagellar biosynthesis protein FliP

NC_017168
(Yersinia pestis A1122)

4e-23

218) fliP
( YP_001604861.1 )

flagellar biosynthesis protein FliP

NC_010159
(Yersinia pestis Angola)

4e-23

219) fliP
( YP_652991.1 )

flagellar biosynthesis protein FliP

NC_008150
(Yersinia pestis Antiqua)

4e-23

220) fliP
( YP_002345771.1 )

flagellar biosynthesis protein FliP

NC_003143
(Yersinia pestis CO92)

4e-23

221) fliP
( YP_005503829.1 )

putative flagellar assembly protein

NC_017154
(Yersinia pestis D106004)

4e-23

222) fliP
( YP_005507700.1 )

putative flagellar assembly protein

NC_017160
(Yersinia pestis D182038)

4e-23

223) YPC_3863
( YP_005625585.1 )

Flagellar biosynthesis protein fliP

NC_017265
(Yersinia pestis Harbin 35)

4e-23

224) fliP
( NP_670767.1 )

flagellar biosynthesis protein FliP

NC_004088
(Yersinia pestis KIM)

4e-23

225) fliP
( YP_646499.1 )

flagellar biosynthesis protein FliP

NC_008149
(Yersinia pestis Nepal516)

4e-23

226) fliP
( YP_001161877.1 )

flagellar biosynthesis protein FliP

NC_009381
(Yersinia pestis Pestoides F)

4e-23

227) fliP
( YP_003566835.1 )

putative flagellar assembly protein

NC_014029
(Yersinia pestis Z176003)

4e-23

228) fliP
( YP_071844.1 )

flagellar biosynthesis protein FliP

NC_006155
(Yersinia pseudotuberculosis IP 32953)

4e-23

229) fliP
( YP_001873899.1 )

flagellar biosynthesis protein FliP

NC_010634
(Yersinia pseudotuberculosis PB1/+)

4e-23

230) fliP
( YP_001719460.1 )

flagellar biosynthesis protein FliP

NC_010465
(Yersinia pseudotuberculosis YPIII)

4e-23

231) Cwoe_0066
( YP_003391877.1 )

flagellar biosynthetic protein FliP

NC_013739
(Conexibacter woesei DSM 14684)

6e-23

232) Tmar_0992
( YP_004101832.1 )

flagellar biosynthetic protein FliP

NC_014831
(Thermaerobacter marianensis DSM 12885)

1e-22

233) fliP
( YP_003190237.1 )

flagellar biosynthesis protein FliP

NC_013216
(Desulfotomaculum acetoxidans DSM 771)

4e-22

234) fliP
( NP_929205.1 )

flagellar biosynthesis protein FliP

NC_005126
(Photorhabdus luminescens TTO1)

7e-22

235) fliP
( YP_003041460.1 )

flagellar biosynthetic protein flip precursor

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

8e-22

236) fliP
( YP_455736.1 )

flagellar biosynthesis protein FliP

NC_007712
(Sodalis glossinidius morsitans)

1e-21

237) fliP
( YP_003711940.1 )

flagellar biosynthesis protein

NC_014228
(Xenorhabdus nematophila ATCC 19061)

2e-21

238) fliP
( YP_574016.1 )

flagellar biosynthesis protein FliP

NC_007963
(Chromohalobacter salexigens DSM 3043)

2e-21

239) fliP
( YP_007955705.1 )

flagellar biosynthesis protein FliP

NC_021191
(Actinoplanes sp. N902-109)

2e-21

240) fliP
( YP_008138959.1 )

flagellar biosynthetic protein flip

NC_021591
(Serratia odorifera 4Rx13)

3e-21

241) SerAS9_3041
( YP_004506421.1 )

flagellar biosynthetic protein FliP

NC_015567
(Serratia plymuthica AS9)

3e-21

242) fliP
( YP_008159817.1 )

flagellar biosynthesis protein FliP

NC_021659
(Serratia plymuthica S13)

3e-21

243) SerAS12_3042
( YP_004501468.1 )

flagellar biosynthetic protein FliP

NC_015566
(Serratia sp. AS12)

3e-21

244) SerAS13_3044
( YP_006025883.1 )

flagellar biosynthetic protein FliP

NC_017573
(Serratia sp. AS13)

3e-21

245) fliP
( YP_786224.1 )

flagellar biosynthesis protein FliP

NC_010645
(Bordetella avium 197N)

4e-21

246) fliP
( YP_006762434.1 )

flagellar biosynthesis protein, protein export component FliP

NC_018645
(Desulfobacula toluolica Tol2)

5e-21

247) Clole_2443
( YP_004309347.1 )

flagellar biosynthetic protein FliP

NC_015275
(Clostridium lentocellum DSM 5427)

8e-21

248) fliP
( YP_004751609.1 )

flagellar biosynthesis protein

NC_015856
(Collimonas fungivorans Ter331)

1e-20

249) fliP
( YP_003899437.1 )

flagellar biosynthesis protein FliP

NC_014532
(Halomonas elongata DSM 2581)

1e-20

250) Sulac_3139
( YP_005258257.1 )

flagellar biosynthetic protein FliP

NC_016884
(Sulfobacillus acidophilus DSM 10332)

1e-20

251) fliP
( YP_004720285.1 )

flagellar biosynthetic protein FliP

NC_015757
(Sulfobacillus acidophilus TPY)

1e-20

252) Hipma_0871
( YP_004339900.1 )

flagellar biosynthetic protein FliP

NC_015318
(Hippea maritima DSM 10411)

4e-20

253) Mahau_0870
( YP_004462890.1 )

flagellar biosynthetic protein FliP

NC_015520
(Mahella australiensis 50-1 BON)

6e-20

254) PT7_0779
( YP_004415943.1 )

flagellar biosynthesis protein FliP

NC_015458
(Pusillimonas sp. T7-7)

7e-20

255) fliP
( YP_001676432.1 )

flagellar biosynthesis protein FliP

NC_010334
(Shewanella halifaxensis HAW-EB4)

5e-19

256) fliP
( YP_049816.1 )

flagellar biosynthesis protein FliP

NC_004547
(Pectobacterium atrosepticum SCRI1043)

7e-19

257) PC1_2585
( YP_003018152.1 )

flagellar biosynthetic protein FliP

NC_012917
(Pectobacterium carotovorum PC1)

9e-19

258) fliP
( YP_001454444.1 )

flagellar biosynthesis protein FliP

NC_009792
(Citrobacter koseri ATCC BAA-895)

1e-18

259) PCC21_026900
( YP_006647346.1 )

flagellar biosynthesis protein FliP

NC_018525
(Pectobacterium carotovorum PCC21)

3e-18

260) Celgi_0475
( YP_004599565.1 )

flagellar biosynthetic protein FliP

NC_015671
(Cellvibrio gilvus ATCC 13127)

1e-17

261) Rahaq2_2559
( YP_005200551.1 )

flagellar biosynthetic protein FliP

NC_016818
(Rahnella aquatilis CIP 78.65)

3e-17

262) fliP
( YP_005402318.1 )

flagellar biosynthesis protein FliP

NC_017047
(Rahnella aquatilis HX2)

3e-17

263) Rahaq_2499
( YP_004213233.1 )

flagellar biosynthetic protein FliP

NC_015061
(Rahnella sp. Y9602)

3e-17

264) RSPPHO_01389
( YP_005416985.1 )

flagellar transport protein FliP

NC_017059
(Rhodospirillum photometricum DSM 122)

7e-17

265) fliP
( YP_001036912.1 )

flagellar biosynthesis protein FliP

NC_009012
(Clostridium thermocellum ATCC 27405)

1e-16

266) Clo1313_1739
( YP_005688247.1 )

flagellar biosynthetic protein FliP

NC_017304
(Clostridium thermocellum DSM 1313)

1e-16

267) Sked_31060
( YP_003315837.1 )

flagellar biosynthetic protein FliP

NC_013521
(Sanguibacter keddieii DSM 10542)

1e-16

268) Achl_2976
( YP_002489026.1 )

flagellar biosynthetic protein FliP

NC_011886
(Arthrobacter chlorophenolicus A6)

2e-16

269) MDS_4752
( YP_004382535.1 )

flagellar biosynthesis protein FliP

NC_015410
(Pseudomonas mendocina NK-01)

4e-16

270) fliP
( YP_002898876.1 )

flagellar biosynthesis protein FliP

NC_012695
(Burkholderia pseudomallei MSHR346)

1e-15

271) TepRe1_1237
( YP_004460690.1 )

flagellar biosynthetic protein FliP

NC_015519
(Tepidanaerobacter acetatoxydans Re1)

2e-15

272) fliP
( YP_007272056.1 )

flagellar biosynthesis protein

NC_019954
(Tepidanaerobacter acetatoxydans Re1)

2e-15

273) Celf_0690
( YP_004452217.1 )

flagellar biosynthetic protein FliP

NC_015514
(Cellulomonas fimi ATCC 484)

2e-15

274) fliP
( YP_124071.1 )

flagellar biosynthesis protein FliP

NC_006368
(Legionella pneumophila Paris)

8e-15

275) fliP
( YP_001250540.1 )

flagellar biosynthesis protein FliP

NC_009494
(Legionella pneumophila Corby)

2e-12

276) fliP
( YP_003619080.1 )

flagellar biosynthetic protein FliP

NC_014125
(Legionella pneumophila 2300/99 Alcoy)

3e-12

277) lp12_1727
( YP_005186088.1 )

flagellar biosynthetic protein FliP

NC_016811
(Legionella pneumophila ATCC 43290)

3e-12

278) LPE509_01400
( YP_007567943.1 )

Flagellar biosynthesis protein FliP

NC_020521
(Legionella pneumophila Philadelphia 1)

3e-12

279) fliP
( YP_095815.1 )

flagellar biosynthesis protein FliP

NC_002942
(Legionella pneumophila Philadelphia 1)

3e-12

280) fliP
( YP_008063475.1 )

flagellar biosynthetic protein FliP

NC_021350
(Legionella pneumophila Thunder Bay)

3e-12

281) fliP
( YP_921955.1 )

flagellar biosynthesis protein FliP

NC_008699
(Nocardioides sp. JS614)

4e-12

282) fliP
( YP_617964.1 )

flagellar biosynthesis protein FliP

NC_008048
(Sphingopyxis alaskensis RB2256)

4e-12

283) M446_5157
( YP_001771916.1 )

flagellar biosynthetic protein FliP

NC_010511
(Methylobacterium sp. 4-46)

8e-12

284) Afer_0155
( YP_003108797.1 )

flagellar biosynthetic protein FliP

NC_013124
(Acidimicrobium ferrooxidans DSM 10331)

1e-11

285) Mrad2831_5050
( YP_001757691.1 )

flagellar biosynthetic protein FliP

NC_010505
(Methylobacterium radiotolerans JCM 2831)

7e-11

286) Anae109_0745
( YP_001377942.1 )

type III secretion system protein

NC_009675
(Anaeromyxobacter sp. Fw109-5)

0.039

287) Thivi_0368
( YP_006412562.1 )

flagellar biosynthetic protein FliP

NC_018012
(Thiocystis violascens DSM 198)

0.077

• Sequence Alignments

1) hrcR in NC_004578


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  309 bits (1160),  Expect = 6e-86, Method: Compositional matrix adjust.
 Identities = 200/200 (100%), Positives = 200/200 (100%), Gaps = 0/200 (0%)

Query  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60
            MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120
            RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTlslplkll  180
            NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  181  lFVMVSGWSRLLDSLFYSYM  200
            LFVMVSGWSRLLDSLFYSYM
Sbjct  181  LFVMVSGWSRLLDSLFYSYM  200

2) hrcR in NC_005773


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  295 bits (1106),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 188/200 (94%), Positives = 199/200 (99%), Gaps = 0/200 (0%)

Query  16   LSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEIQQ  75
            +SLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHE+QQ
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  76   RVHEHPLELGSADKLQSSLKTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQANK  135
            RVH+HPLELG+++KLQ+S +TVIEPLQRFMTRNTDPDVVAHLL+NTQRMWPKEMADQA+K
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  136  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTlslplkll  195
            NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  196  lfvlVSGWSRLLDSLFYSYM  215
            LFV+VSGWSRLLDSLFYSYM
Sbjct  181  LFVMVSGWSRLLDSLFYSYM  200

3) HrcR in NC_007005


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  294 bits (1100),  Expect = 4e-81, Method: Compositional matrix adjust.
 Identities = 186/200 (93%), Positives = 198/200 (99%), Gaps = 0/200 (0%)

Query  18   LSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQ  77
            +SLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAH++QQ
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  78   RVHEHPLELSNADKLQSSLKVVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQASK  137
            RVH+HPLEL+N++KLQ+S + VIEPLQRFMTRNTDPDVVAHLL+NTQRMWPKEMADQASK
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  138  DDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTlslplkll  197
            +DLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  198  lfvlVSGWSRLLDSLFYSYM  217
            LFV+VSGWSRLLDSLFYSYM
Sbjct  181  LFVMVSGWSRLLDSLFYSYM  200

4) Pmen_0046 in NC_009439


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  268 bits (1001),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 163/200 (82%), Positives = 190/200 (95%), Gaps = 0/200 (0%)

Query  18   LSLIPFLLIVCTAFLKIAMTLMITRNAIGVQQVPPNMAIYGIALAATMFVMAPVAYEIQN  77
            +SLIPFLLIVCTAFLKIAMTL+ITRNAIGVQQVPPNMA+YGIALAATMFVMAPVA E+Q+
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  78   RLSDNPLDLSSTDSLQASAGNVVEPLQDFMVNNTDPDIATHLLENTQRMWPREMSEKASK  137
            R+ D+PL+L++T+ LQASA  V+EPLQ FM  NTDPD+ +HLL+NTQRMWP+EM+++ASK
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  138  SDLLLAIPAFVLSELQAAFQIGFLIYIPFIVIDLIISNLLLALGMQMVSPMTISlplkll  197
            +DLLLAIPAFVLSELQA+F+IGFLIYIPFIVIDLI+SNLLLALGMQMVSPMT+SLPLKLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  198  lfvlVDGWTRLLNSLFYSYM  217
            LFV+V GW+RLL+SLFYSYM
Sbjct  181  LFVMVSGWSRLLDSLFYSYM  200

5) PSEBR_a5382 in NC_015379


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  253 bits (945),  Expect = 6e-69, Method: Compositional matrix adjust.
 Identities = 147/200 (74%), Positives = 187/200 (94%), Gaps = 0/200 (0%)

Query  18   ISLVPLLLIICSAFLKIAIVLTITRNAIGVQQVPPNMALYAIALAATLFIMAPVGHNIAE  77
            +SL+P+LLI+C+AFLKIA+ L ITRNAIGVQQVPPNMALY+IALAAT+F+MAPV+H++ +
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  78   QVKERPLDFSNTEALQGSALNAIKPLQAFMSRNTNPDILAHLLENTQRMWPKERAEQASR  137
            +V ++PL+++NTE LQ+SA   I PLQ FM+RNT+PD++AHLL+NTQRMWPKE A+QAS+
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  138  DDLMLLIPAFMLSELEAGFQMGFLIYIPFIVIDLIVSNLLLALGMQMVAPMTISLPLKLL  197
            +DL+L IPAF+LSEL+AGF++GFLIYIPFIVIDLIVSNLLLALGMQMV+PMT+SLPLKLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  198  IFVLVQGWTQLLDSLFYSYL  217
            +FV+V GW++LLDSLFYSY+
Sbjct  181  LFVMVSGWSRLLDSLFYSYM  200

6) hrcR in NC_016830


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  252 bits (940),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 146/200 (73%), Positives = 187/200 (94%), Gaps = 0/200 (0%)

Query  18   ISLVPLLLIICSAFLKIAIVLTITRNAIGVQQVPPNMALYAIALAATLFIMAPVGHNIAE  77
            +SL+P+LLI+C+AFLKIA+ L ITRNAIGVQQVPPNMALY+IALAAT+F+MAPV+H++ +
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  78   QLKERPLDFSNTEALQGSALNAIKPLQAFMSRNTNPDILAHLLENTQRMWPKERAEQASR  137
            ++ ++PL+++NTE LQ+SA   I PLQ FM+RNT+PD++AHLL+NTQRMWPKE A+QAS+
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  138  DDLMLLIPAFMLSELEAGFQMGFLIYIPFIVIDLIVSNLLLALGMQMVAPMTISLPLKLL  197
            +DL+L IPAF+LSEL+AGF++GFLIYIPFIVIDLIVSNLLLALGMQMV+PMT+SLPLKLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  198  IFVLVQGWTQLLDSLFYSYL  217
            +FV+V GW++LLDSLFYSY+
Sbjct  181  LFVMVSGWSRLLDSLFYSYM  200

7) hrcR in NC_017445


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  247 bits (921),  Expect = 5e-67, Method: Compositional matrix adjust.
 Identities = 145/200 (73%), Positives = 179/200 (90%), Gaps = 0/200 (0%)

Query  18   LSLIPMLMIVCTCFLKISMVLLITRNAIGVQQVPPNMALYGIALAATLFVMAPVFNQMQQ  77
            +SLIP L+IVCT FLKI+M LLITRNAIGVQQVPPNMALYGIALAAT+FVMAPV ++MQQ
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  78   QFSQVPADLSSMDNLKTSVSNGVAPLQKFMTHNTDPDILIHLQENSVRMWPKEMSDSVSK  137
            +  + P +L++ ++L++S    + PLQ+FMT+NTDPD++ HL +N+ RMWPKEM+D  SK
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  138  DNLLLVIPAFVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLALGMQMVAPMTLSLPLKML  197
            ++LLL IPAFVLSELQAGF IGFLIYIPFIVIDLIVSN+LLALGMQMV+PMTLSLPLK+L
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  198  LFVLINGWTRLLDGLFYSYL  217
            LFV+++GW+RLLD+LFYSY+
Sbjct  181  LFVMVSGWSRLLDSLFYSYM  200

8) hcrR in NC_017390


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  247 bits (921),  Expect = 5e-67, Method: Compositional matrix adjust.
 Identities = 145/200 (73%), Positives = 179/200 (90%), Gaps = 0/200 (0%)

Query  18   LSLIPMLMIVCTCFLKISMVLLITRNAIGVQQVPPNMALYGIALAATLFVMAPVFNQMQQ  77
            +SLIP L+IVCT FLKI+M LLITRNAIGVQQVPPNMALYGIALAAT+FVMAPV ++MQQ
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  78   QFSQVPADLSSMDNLKTSVSNGVAPLQKFMTHNTDPDILIHLQENSVRMWPKEMSDSVSK  137
            +  + P +L++ ++L++S    + PLQ+FMT+NTDPD++ HL +N+ RMWPKEM+D  SK
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  138  DNLLLVIPAFVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLALGMQMVAPMTLSLPLKML  197
            ++LLL IPAFVLSELQAGF IGFLIYIPFIVIDLIVSN+LLALGMQMV+PMTLSLPLK+L
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  198  LFVLINGWTRLLDGLFYSYL  217
            LFV+++GW+RLLD+LFYSY+
Sbjct  181  LFVMVSGWSRLLDSLFYSYM  200

9) hrcR in NC_012214


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  247 bits (921),  Expect = 5e-67, Method: Compositional matrix adjust.
 Identities = 145/200 (73%), Positives = 179/200 (90%), Gaps = 0/200 (0%)

Query  18   LSLIPMLMIVCTCFLKISMVLLITRNAIGVQQVPPNMALYGIALAATLFVMAPVFNQMQQ  77
            +SLIP L+IVCT FLKI+M LLITRNAIGVQQVPPNMALYGIALAAT+FVMAPV ++MQQ
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  78   QFSQVPADLSSMDNLKTSVSNGVAPLQKFMTHNTDPDILIHLQENSVRMWPKEMSDSVSK  137
            +  + P +L++ ++L++S    + PLQ+FMT+NTDPD++ HL +N+ RMWPKEM+D  SK
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  138  DNLLLVIPAFVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLALGMQMVAPMTLSLPLKML  197
            ++LLL IPAFVLSELQAGF IGFLIYIPFIVIDLIVSN+LLALGMQMV+PMTLSLPLK+L
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  198  LFVLINGWTRLLDGLFYSYL  217
            LFV+++GW+RLLD+LFYSY+
Sbjct  181  LFVMVSGWSRLLDSLFYSYM  200

10) hrcR in NC_010694


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  246 bits (917),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 145/200 (73%), Positives = 177/200 (89%), Gaps = 0/200 (0%)

Query  18   LSLIPMLMIVCTCFLKISMVLLITRNAIGVQQVPPNMALYGIALAATLFVMAPVFNQMQQ  77
            +SLIP L+IVCT FLKI+M LLITRNAIGVQQVPPNMALYGIALAAT+FVMAPV ++MQQ
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  78   QFSQSPADLSSMDSLKNSVTHGVAPLQKFMTHNTDPDILIHLQENSVRMWPKEMSDSVSK  137
            +  + P +L++ + L+ S    + PLQ+FMT+NTDPD++ HL +N+ RMWPKEM+D  SK
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  138  DNLLLVIPAFVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLALGMQMVAPMTLSLPLKML  197
            ++LLL IPAFVLSELQAGF IGFLIYIPFIVIDLIVSN+LLALGMQMV+PMTLSLPLK+L
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  198  LFVLINGWTRLLDGLFYSYL  217
            LFV+++GW+RLLD+LFYSY+
Sbjct  181  LFVMVSGWSRLLDSLFYSYM  200

11) hrcR in NC_013971


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  246 bits (919),  Expect = 6e-67, Method: Compositional matrix adjust.
 Identities = 144/200 (72%), Positives = 179/200 (90%), Gaps = 0/200 (0%)

Query  18   LSLIPMLMIVCTCFLKISMVLLITRNAIGVQQVPPNMALYGIALAATLFVMAPVFNQMQQ  77
            +SLIP L+IVCT FLKI+M LLITRNAIGVQQVPPNMALYGIALAAT+FVMAPV ++MQQ
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  78   QFSQVPADLSSMDNLKTSVTNGVAPLQKFMTHNTDPDILIHLQENSVRMWPKEMSDSVNK  137
            +  + P +L++ ++L++S    + PLQ+FMT+NTDPD++ HL +N+ RMWPKEM+D  +K
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  138  DNLLLVIPAFVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLALGMQMVAPMTLSLPLKML  197
            ++LLL IPAFVLSELQAGF IGFLIYIPFIVIDLIVSN+LLALGMQMV+PMTLSLPLK+L
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  198  LFVLINGWTRLLDGLFYSYL  217
            LFV+++GW+RLLD+LFYSY+
Sbjct  181  LFVMVSGWSRLLDSLFYSYM  200

12) hcrR in NC_013961


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  246 bits (919),  Expect = 6e-67, Method: Compositional matrix adjust.
 Identities = 144/200 (72%), Positives = 179/200 (90%), Gaps = 0/200 (0%)

Query  18   LSLIPMLMIVCTCFLKISMVLLITRNAIGVQQVPPNMALYGIALAATLFVMAPVFNQMQQ  77
            +SLIP L+IVCT FLKI+M LLITRNAIGVQQVPPNMALYGIALAAT+FVMAPV ++MQQ
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  78   QFSQVPADLSSMDNLKTSVTNGVAPLQKFMTHNTDPDILIHLQENSVRMWPKEMSDSVNK  137
            +  + P +L++ ++L++S    + PLQ+FMT+NTDPD++ HL +N+ RMWPKEM+D  +K
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  138  DNLLLVIPAFVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLALGMQMVAPMTLSLPLKML  197
            ++LLL IPAFVLSELQAGF IGFLIYIPFIVIDLIVSN+LLALGMQMV+PMTLSLPLK+L
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  198  LFVLINGWTRLLDGLFYSYL  217
            LFV+++GW+RLLD+LFYSY+
Sbjct  181  LFVMVSGWSRLLDSLFYSYM  200

13) Marme_1071 in NC_015276


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  238 bits (889),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 133/196 (68%), Positives = 177/196 (91%), Gaps = 0/196 (0%)

Query  22   PIMLIVCSAFLKISMVLMITRNAMGVQQVPPNMAIYGIALAATMFVMAPVFSDIGNKVKE  81
            P++LIVC+AFLKI+M L+ITRNA+GVQQVPPNMA+YGIALAATMFVMAPV  ++ ++V +
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  82   TPPDFSSLEGMQTSANKIVGPLQAFMSRNSNPDVTTHMMDNTARLWPKEMASKVTKDDLM  141
             P ++++ E +Q+SA  ++ PLQ FM+RN++PDV +H++DNT R+WPKEMA + +K+DL+
Sbjct  65   HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLL  124

Query  142  IVIPSFMLSELKAGLQIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKILLFVL  201
            + IP+F+LSEL+AG++IGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT+SLPLK+LLFV+
Sbjct  125  LAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVM  184

Query  202  VDGWGRLLDGLFYTYI  217
            V GW+RLLD+LFY+Y+
Sbjct  185  VSGWSRLLDSLFYSYM  200

14) hrcR in NC_004547


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  234 bits (874),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 141/200 (71%), Positives = 177/200 (89%), Gaps = 0/200 (0%)

Query  18   LSLIPLMMIVCTCFLKIAIVLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVFQDISK  77
            +SLIP+++IVCT FLKIA+ LLITRNAIGVQQVPPNMALYGIALAATMFVMAPV +++ +
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  78   RVQEKPLDMTDITSLQASVTYGLEPLQTFMSRNVDPDILTHLHENSLQMWPASLSEKVNT  137
            RV++ PL++ +   LQAS    +EPLQ FM+RN DPD+++HL +N+ +MWP  ++++ + 
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  138  QNLLLVIPAFVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLALGMQMVAPMTlslplkll  197
            ++LLL IPAFVLSELQAGF IGFLIYIPFIVIDLIVSN+LLALGMQMV+PMTLSLPLKLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  198  lfvlVNGWTRLLDGLFYSYL  217
            LFV+V+GW+RLLD+LFYSY+
Sbjct  181  LFVMVSGWSRLLDSLFYSYM  200

15) H045_00190 in NC_020209


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  234 bits (871),  Expect = 4e-63, Method: Compositional matrix adjust.
 Identities = 143/200 (72%), Positives = 176/200 (88%), Gaps = 0/200 (0%)

Query  18   MSLLPMLLVVCTAFLKIVIVLMITRNAIGVQQVPPSMAINGIALAATLFVMAPVGYQIAE  77
            MSL+P LL+VCTAFLKI + L+ITRNAIGVQQVPP+MA+ GIALAAT+FVMAPV+ ++ +
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  78   NLKTSPLDMSNVQTLQATGLVAIQPLRTFMTRNTDPDVLTHLQENSARMWPPEMAQSTQR  137
             +   PL+++N + LQA++   I+PL+ FMTRNTDPDV++HL +N+ RMWP EMA+ + +
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  138  EDWVLLIPAFVVSQLQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLL  197
            +D +L IPAFV+S+LQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT+SLPLKLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  198  LFVMVSGWSRLLDSLFLSYL  217
            LFVMVSGWSRLLDSLF SY+
Sbjct  181  LFVMVSGWSRLLDSLFYSYM  200

16) PC1_2212 in NC_012917


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  234 bits (871),  Expect = 5e-63, Method: Compositional matrix adjust.
 Identities = 140/200 (70%), Positives = 177/200 (89%), Gaps = 0/200 (0%)

Query  18   LSLIPLMMIVCTCFLKIAIVLLITRNAIGVQQVPPNMALYGIALAATLFVMAPVFQDISK  77
            +SLIP+++IVCT FLKIA+ LLITRNAIGVQQVPPNMALYGIALAAT+FVMAPV +++ +
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  78   RVQEKPLDMTDITSLQASVTYGLEPLQTFMSRNVDPDILTHLHENSLQMWPASLSEKVNT  137
            RV++ PL++ +   LQAS    +EPLQ FM+RN DPD+++HL +N+ +MWP  ++++ + 
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  138  QNLLLVIPAFVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLALGMQMVAPMTlslplkll  197
            ++LLL IPAFVLSELQAGF IGFLIYIPFIVIDLIVSN+LLALGMQMV+PMTLSLPLKLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  198  lfvlVNGWTRLLDGLFYSYL  217
            LFV+V+GW+RLLD+LFYSY+
Sbjct  181  LFVMVSGWSRLLDSLFYSYM  200

17) PCC21_022910 in NC_018525


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  234 bits (871),  Expect = 5e-63, Method: Compositional matrix adjust.
 Identities = 140/200 (70%), Positives = 177/200 (89%), Gaps = 0/200 (0%)

Query  18   LSLIPLMMIVCTCFLKIAIVLLITRNAIGVQQVPPNMALYGIALAATLFVMAPVFQDISK  77
            +SLIP+++IVCT FLKIA+ LLITRNAIGVQQVPPNMALYGIALAAT+FVMAPV +++ +
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  78   RVQEKPLDMTDITSLQASVTYGLEPLQTFMSRNVDPDILTHLHENSLQMWPASLSEKVNT  137
            RV++ PL++ +   LQAS    +EPLQ FM+RN DPD+++HL +N+ +MWP  ++++ + 
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  138  QNLLLVIPAFVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLALGMQMVAPMTlslplkll  197
            ++LLL IPAFVLSELQAGF IGFLIYIPFIVIDLIVSN+LLALGMQMV+PMTLSLPLKLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  198  lfvlVNGWTRLLDGLFYSYL  217
            LFV+V+GW+RLLD+LFYSY+
Sbjct  181  LFVMVSGWSRLLDSLFYSYM  200

18) rscR in NC_012660


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  233 bits (868),  Expect = 7e-63, Method: Compositional matrix adjust.
 Identities = 140/197 (72%), Positives = 170/197 (87%), Gaps = 0/197 (0%)

Query  21   MPMLLVVCTAFLKIVIVLMITRNAIGVQQVPPSMAINGIALATTLFIMAPVGYEIAESVK  80
            +P LL+VCTAFLKI + L+ITRNAIGVQQVPP+MA+ GIALA+T+F+MAPV+ E+ + V 
Sbjct  4    IPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVH  63

Query  81   ALPLDLSNVQTLLQTANEAIKPLRAFMLRNIDPDVLTHLLENTARLWPAQMAQEVQREDL  140
              PL+L+N + L  +A   I PL+ FM RN DPDV++HLL+NT R+WP +MA++  ++DL
Sbjct  64   DHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDL  123

Query  141  ILLIPAFVLSQLQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFV  200
            +L IPAFVLS+LQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT+SLPLKLLLFV
Sbjct  124  LLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFV  183

Query  201  MVSGWSRLLDSLFLSYL  217
            MVSGWSRLLDSLF SY+
Sbjct  184  MVSGWSRLLDSLFYSYM  200

19) D781_3938 in NC_020064


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  232 bits (865),  Expect = 1e-62, Method: Compositional matrix adjust.
 Identities = 139/200 (70%), Positives = 173/200 (87%), Gaps = 0/200 (0%)

Query  18   LSLVPMLMIVCTCFLKISMVLLLTRNAMGVQQVPPNMALYGIALAATLFVMAPVFNDMSQ  77
            +SL+P L+IVCT FLKI+M LL+TRNA+GVQQVPPNMALYGIALAAT+FVMAPV ++M Q
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  78   RLKAMPLDFSNMERLEYTFGNGAEPLKAFMTRNTDPDILTHLQENGARMWPKEMAQSLTP  137
            R+   PL+++N E+L+ +     EPL+ FMTRNTDPD+++HL +N  RMWPKEMA+  + 
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  138  QSPLLVIPAFVLSELQNGFKIGFLIFIPFLVMDLIVSNVLLALGMQMVSPMTVSLPLKIL  197
            +  LL IPAFVLSELQ GF IGFLI+IPF+V+DLIVSN+LLALGMQMVSPMT+SLPLK+L
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  198  LFVLVSGWTRLLDGLFYSYL  217
            LFV+VSGW+RLLD+LFYSY+
Sbjct  181  LFVMVSGWSRLLDSLFYSYM  200

20) Ser39006_2919 in NC_022268


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  232 bits (864),  Expect = 2e-62, Method: Compositional matrix adjust.
 Identities = 135/200 (68%), Positives = 177/200 (89%), Gaps = 0/200 (0%)

Query  18   LSLIPMMMIVCTCFLKIAMVLIITRNAIGVQQVPPNMALYGIALASTLFIMAPVFNDIRQ  77
            +SLIP ++IVCT FLKIAM L+ITRNAIGVQQVPPNMALYGIALA+T+F+MAPV ++++Q
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  78   QFQDTPLDLNSIETLETTLGSGITPLQKFMSRNSDPDILVHLHENSIRMWPASMSEKVNT  137
            + +D PL+L + E L+++  + I PLQ+FM+RN+DPD++ HL +N+ RMWP  M+++ + 
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  138  QNILLVIPAFVLSELQAGFKIGFLVYIPFIVIDLIVSNVLLALGMQMVAPTTlslplkll  197
            +++LL IPAFVLSELQAGF IGFL+YIPFIVIDLIVSN+LLALGMQMV+P TLSLPLKLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  198  lfilVNGWTRLLDGLFYSYL  217
            LF++V+GW+RLLD+LFYSY+
Sbjct  181  LFVMVSGWSRLLDSLFYSYM  200

21) hrcR in NC_014500


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  231 bits (863),  Expect = 2e-62, Method: Compositional matrix adjust.
 Identities = 136/200 (68%), Positives = 179/200 (90%), Gaps = 0/200 (0%)

Query  18   LSLIPLMMIVCTCFLKVSMVLMITRNAIGVQQVPPNMALYGIALAATLFVMAPVFSDIKQ  77
            +SLIP+++IVCT FLK++M L+ITRNAIGVQQVPPNMALYGIALAAT+FVMAPV  +++Q
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  78   RFQDAPVDFSSLDALESSVTKGIEPLQKFMSRNTDPDILTHLHENSLRMWPASMSEKITT  137
            R +D P+++++ + L++S    IEPLQ+FM+RNTDPD+++HL +N+ RMWP  M+++ + 
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  138  QNILLVLPAYVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLALGMQMVAPTTlslplkll  197
            +++LL +PA+VLSELQAGF IGFLIYIPFIVIDLIVSN+LLALGMQMV+P TLSLPLKLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  198  lfvlVNGWTRLLDGLFYSYL  217
            LFV+V+GW+RLLD+LFYSY+
Sbjct  181  LFVMVSGWSRLLDSLFYSYM  200

22) Dd1591_1885 in NC_012912


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  229 bits (855),  Expect = 9e-62, Method: Compositional matrix adjust.
 Identities = 138/200 (69%), Positives = 177/200 (89%), Gaps = 0/200 (0%)

Query  18   LSLIPLSMIVCTCFLKISMVLMITRNAIGVQQVPPNMALYGIALAATVFVMAPVFSDIKQ  77
            +SLIP+ +IVCT FLKI+M L+ITRNAIGVQQVPPNMALYGIALAAT+FVMAPV  +++Q
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  78   RFQDAPVDFSNLDALESSVTRGIEPLQKFMSRNTDPDILTHLHENSLRMWPAAMSEKITT  137
            R +D P++++N + L++S    IEPLQ+FM+RNTDPD+++HL +N+ RMWP  M+++ + 
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  138  QSILLIVPAYVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLALGMQMVAPTTlslplkll  197
            + +LL +PA+VLSELQAGF IGFLIYIPFIVIDLIVSN+LLALGMQMV+P TLSLPLKLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  198  lfvlVNGWTRLLDGLFYSYL  217
            LFV+V+GW+RLLD+LFYSY+
Sbjct  181  LFVMVSGWSRLLDSLFYSYM  200

23) rscR in NC_017911


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  226 bits (842),  Expect = 8e-61, Method: Compositional matrix adjust.
 Identities = 138/200 (69%), Positives = 173/200 (87%), Gaps = 0/200 (0%)

Query  18   LSLMPMLLVVCTAFLKIVIVLMITRNAIGVQQVPPSMAINGIALAATLFIMAPVGYEIAE  77
            +SL+P LL+VCTAFLKI + L+ITRNAIGVQQVPP+MA+ GIALAAT+F+MAPV+ E+ +
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  78   NLKASPLDMTNVQTFLSTGNEAINPLRAFMLRNVDPDVLTHLLENTARLWPAKMAQEVQR  137
             +   PL++ N + + +++   I+PL+ FM RN DPDV++HLL+NT R+WP  MA++  +
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  138  EDLILLIPAFVLSQLQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISlplkll  197
            +DL+L IPAFVLS+LQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT+SLPLKLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  198  lfvlVSGWSRLLDSLFLSYL  217
            LFV+VSGWSRLLDSLF SY+
Sbjct  181  LFVMVSGWSRLLDSLFYSYM  200

24) Dd586_1882 in NC_013592


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  225 bits (839),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 134/200 (67%), Positives = 177/200 (89%), Gaps = 0/200 (0%)

Query  18   LSLIPLAMIVCTCFLKISMVLMLTRNAIGVQQVPPNMALYGVALAATLFVMAPVFSDIKL  77
            +SLIP+ +IVCT FLKI+M L++TRNAIGVQQVPPNMALYG+ALAAT+FVMAPV  +++ 
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  78   RFQDAPVDFSSLDALESSVTRGIEPLQKFMSRNTDPDILTHLHENSLRMWPAAMTEKITT  137
            R +D P+++++ + L++S    IEPLQ+FM+RNTDPD+++HL +N+ RMWP  M+++ + 
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  138  QNILLILPAYVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLALGMQMVAPTTlslplkll  197
            +++LL +PA+VLSELQAGF IGFLIYIPFIVIDLIVSN+LLALGMQMV+P TLSLPLKLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  198  lfvlVNGWTRLLDGLFYSYL  217
            LFV+V+GW+RLLD+LFYSY+
Sbjct  181  LFVMVSGWSRLLDSLFYSYM  200

25) H650_14845 in NC_021500


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  186 bits (690),  Expect = 8e-49, Method: Compositional matrix adjust.
 Identities = 102/193 (53%), Positives = 153/193 (80%), Gaps = 0/193 (0%)

Query  25   MIISTSFLKISVVLLIVRNALGIQQVPGNMVIYSISLAATLFIMGPVFNDMTQRVRQISP  84
            +I+ T+FLKI++ LLI RNA+G+QQVP NM +Y+I+LAAT+F+M+PV ++M QRV++ + 
Sbjct  8    LIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPL  67

Query  85   DKIDVAAIYAHYPTVIAPLQNFLQRNIDADTHVRLTEAAKKLWKDQANNPITRDNPALIL  144
            +  +   + A   TVI PLQ F+ RN D+D   +L + ++++W  +  +  ++++  L +
Sbjct  68   ELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  145  SAFVLSELQSGFKIGFLIYIPFLVIDLVVSTVLMALGMQMVAPMFIAIPLKLLLFVLIEG  204
            +AFVLSELQ+GF IGFLIYIPF+VIDL+VS +L+ALGMQMV+PM +++PLKLLLFV++ G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  205  WSRLLEGLFYSYI  217
            WSRLL++LFYSY+
Sbjct  188  WSRLLDSLFYSYM  200

26) yscR in NC_007645


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  166 bits (615),  Expect = 8e-43, Method: Compositional matrix adjust.
 Identities = 95/199 (48%), Positives = 158/199 (80%), Gaps = 0/199 (0%)

Query  16   LSLIPFIAIMTTSFIKLAVVFSLLRNALGIQQIPPNMALYGLAIVLSIYIMAPVGYQIAD  75
            +SLIPF+ I+ T+F+K+A+ + + RNA+G+QQ+PPNMALYG+A+  ++++MAPV+ ++ +
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  76   TVKEKGFDLSQSESLKELANSAIDPMSEFLTKHSSEKERGFFLESAETLWPKEYAARLDT  135
             V +  ++L+++E L+  A + I+P+  F+T+++     + +L++++ +WPKE A +   
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  136  NSMLVLVPSFTISELKSAFEIGFLLYLPFIAIDLIVSNILLAMGMMMVSPMTISlpfkll  195
            N +L+ +P+F +SEL+++FEIGFL+Y+PFI IDLIVSN+LLA+GM MVSPMT+SLP+KLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  196  lfvllDGWTRLTHGLVLSY  214
            LFV++ GW+RL ++L  SY
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

27) hrcR in NC_014323


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  165 bits (609),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 100/194 (52%), Positives = 149/194 (77%), Gaps = 5/194 (2%)

Query  28   TTSFLKISLVLLVLRNAIGVQQVPPTLAIYGIALALSVFIMAPTVQEVGKRAMAVDVSHP  87
             T+FLKI++ LL+ RNAIGVQQVPP +A+YGIALA ++F+MAP  +E+ +R       HP
Sbjct  11   CTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRV----HDHP  66

Query  88   AA-SRTVPILERAQDAFDPLRKFMLKMSHAEQREMFLASAKKLWPKEAAKDAQPTDALIL  146
               + T  +   A+  ++PL++FM + ++++    +L +++++WPKE A +A   D L+ 
Sbjct  67   LELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLA  126

Query  147  IPAFVVSELQTGYEIGFLIYIPFVVIDLLISNLLMALGMQQVSPQTITIPLKLLLFTLVG  206
            IPAFV+SELQ+G+EIGFLIYIPF+VIDL++SNLL+ALGMQ VSP T+++PLKLLLF +V+
Sbjct  127  IPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVS  186

Query  207  GWAKLLNALAMSYV  220
            GW++LL++L  SY+
Sbjct  187  GWSRLLDSLFYSYM  200

28) yscR in NC_015717


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  160 bits (589),  Expect = 8e-41, Method: Compositional matrix adjust.
 Identities = 100/195 (52%), Positives = 147/195 (76%), Gaps = 0/195 (0%)

Query  27   PFIAIMATTYVKLVVVLGLVRNALGVQNVPPNMALNGIAIILTVYIMAPVAIASYQAVRD  86
            PF+ I+ T+++K+ + L + RNA+GVQ+VPPNMAL GIA+  T+++MAPVA    Q V+D
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  87   RPVDTRNMESLADIARDGAKPFLHFLERNTTPADRAFFVDTTHRLWPKDQADSVTDHDIL  146
            +P++  N E L   AR    P+ +F+ RNT P   A ++D T+R+WPK+ AD  + +D+L
Sbjct  65   HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLL  124

Query  147  VLVPAFTTAELTKAFKAGFLLFLPFIVIDLIVSNILLAMGMMMVSPMTISLPFKLFLFVI  206
            + +PAF  +EL  +F  GFL+++PFIVIDLIVSN+LLA+GM MVSPMT+SLP+KL+LFV+
Sbjct  125  LAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVM  184

Query  207  VNGWQKLIQGLVLSY  221
            V+GW +L+++L  SY
Sbjct  185  VSGWSRLLDSLFYSY  199

29) epaP in NC_021173


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  155 bits (571),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 89/199 (45%), Positives = 150/199 (76%), Gaps = 0/199 (0%)

Query  17   LSILPLLMVLGSSFLKLAVVFALLRNALGTQQIPPNIALYGLALVLTLFIMAPVGLAIQD  76
            +S++P+L+++ ++FLK+A+ + + RNA+G QQ+PPN+ALYG+AL  T+F+MAPV+  +Q+
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  77   NLAEHPVQLDDKQFTQQVETTILAPYRDFLARNTARAQVRFFADIGHRTWPEPYRNRIPD  136
             + +HP++L++ +  Q    T++ P + F++RNT    V  + D  +R WP    ++ + 
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  137  DSLIVLIPAFAISQLIEAFKIGLLLFLPFVAIDLIVSNVLLAMGMMMVSPMTIALPLKLL  196
            + L++ IPAF +S+L  +F IG+L+++PF+ IDLIVSN+LLA+GM MVSPMT++LPLKLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  197  VFVLINGWEKLLGQLVLSF  215
            +FV+++GW +LL+ L  S+
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

30) HCH_03263 in NC_007645


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  154 bits (569),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 94/199 (48%), Positives = 147/199 (74%), Gaps = 0/199 (0%)

Query  16   IALIPFFAVMATSFVKIAVVLGLLRNALGIQQIPPNMALYGLAIILTAYIMAPVGISAYN  75
            ++LIPF+ ++ T+F+KIA+ L + RNA+G+QQ+PPNMALYG+A+  T ++MAPV+    +
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  76   ELSTKPISLENTQELKALMDTASQPYKEFLQRHGSEDEQTFFHETAAEIWPEDVAKGLEK  135
             +   P+ L NT+ L+A   T  +P + F+ R+   D  + + + +  +WP ++A    K
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  136  DSFFVLIPAFTASELTSAFEIGFLIYLPFLAIDLIISNILLAMGMMMVSPMTISLPFKLL  195
            + +++ IPAF  SEL ++FEIGFLIY+PF+ IDLI+SN+LLA+GM MVSPMT+SLP+KLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  196  LFVLMDGWTRLIHGLVLAY  214
            LFV++ GW+RL+++L  +Y
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

31) escR in NC_005085


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  153 bits (563),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 89/199 (45%), Positives = 150/199 (76%), Gaps = 0/199 (0%)

Query  17   LSILPLLVVLGTSFLKLAVVFALLRNALGIQQIPPNIALYGLALILTLFIMAPIGLEIQD  76
            +S++P+L+++ T+FLK+A+ + + RNA+G+QQ+PPN+ALYG+AL  T+F+MAP++ E+Q+
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  77   NLIAHPIKIESPAFIQQVESGVFTPYRVFLERNTAPEQVHFFADIGHQIWPEKYQQRIPD  136
             +  HP+ + +   +Q     V+ P + F+ RNT P+ V  + D  +++WP    ++ + 
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  137  NSLLVLMPAFTVSQLIEAFKIGLLLFLPFVAIDLVVSNVLLAMGMMMVSPMTISMPLKLL  196
            N LL+ +PAF +S+L  +F IG+L+++PF+ IDL+VSN+LLA+GM MVSPMT+S+PLKLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  197  VFVLMNGWEKLLGQLVLSF  215
            +FV+++GW +LL+ L  S+
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

32) bscR in NC_018829


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  151 bits (558),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 98/199 (50%), Positives = 143/199 (72%), Gaps = 10/199 (5%)

Query  25   MTTSFLKIAVVLALVRNALGVQQVPPNMALYGLALILSAYVMAPVVHRIGTEVQALTAQA  84
            + T+FLKIA+ L + RNA+GVQQVPPNMALYG+AL  + +VMAPV H +   V+    + 
Sbjct  10   VCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLEL  69

Query  85   GESGTAAPMALDAVLGVAERGV-GPLRAFMLRNSQPAQRDFFLRTARHLWGEEASRDLSE  143
            G++           L  + R V  PL+ FM RN++P     +L  ++++W  E + + S 
Sbjct  70   GNTEK---------LQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  144  DNLLVLTPAFLVSELTAAFQLGFLLYLPFIIIDLIVSNILLAMGMMMVSPVTISMPLKLF  203
            ++LL+  PAF++SEL A+F++GFL+Y+PFI+IDLIVSN+LLA+GM MVSP+T+S+PLKL+
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  204  LFVMVDGWTRLIQGLVLSY  222
            LFVMV GW+RL+++L  SY
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

33) bscR in NC_018518


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  151 bits (558),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 98/199 (50%), Positives = 143/199 (72%), Gaps = 10/199 (5%)

Query  25   MTTSFLKIAVVLALVRNALGVQQVPPNMALYGLALILSAYVMAPVVHRIGTEVQALTAQA  84
            + T+FLKIA+ L + RNA+GVQQVPPNMALYG+AL  + +VMAPV H +   V+    + 
Sbjct  10   VCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLEL  69

Query  85   GESGTAAPMALDAVLGVAERGV-GPLRAFMLRNSQPAQRDFFLRTARHLWGEEASRDLSE  143
            G++           L  + R V  PL+ FM RN++P     +L  ++++W  E + + S 
Sbjct  70   GNTEK---------LQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  144  DNLLVLTPAFLVSELTAAFQLGFLLYLPFIIIDLIVSNILLAMGMMMVSPVTISMPLKLF  203
            ++LL+  PAF++SEL A+F++GFL+Y+PFI+IDLIVSN+LLA+GM MVSP+T+S+PLKL+
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  204  LFVMVDGWTRLIQGLVLSY  222
            LFVMV GW+RL+++L  SY
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

34) bscR in NC_017223


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  151 bits (558),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 98/199 (50%), Positives = 143/199 (72%), Gaps = 10/199 (5%)

Query  25   MTTSFLKIAVVLALVRNALGVQQVPPNMALYGLALILSAYVMAPVVHRIGTEVQALTAQA  84
            + T+FLKIA+ L + RNA+GVQQVPPNMALYG+AL  + +VMAPV H +   V+    + 
Sbjct  10   VCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLEL  69

Query  85   GESGTAAPMALDAVLGVAERGV-GPLRAFMLRNSQPAQRDFFLRTARHLWGEEASRDLSE  143
            G++           L  + R V  PL+ FM RN++P     +L  ++++W  E + + S 
Sbjct  70   GNTEK---------LQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  144  DNLLVLTPAFLVSELTAAFQLGFLLYLPFIIIDLIVSNILLAMGMMMVSPVTISMPLKLF  203
            ++LL+  PAF++SEL A+F++GFL+Y+PFI+IDLIVSN+LLA+GM MVSP+T+S+PLKL+
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  204  LFVMVDGWTRLIQGLVLSY  222
            LFVMV GW+RL+++L  SY
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

35) bscR in NC_002929


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  151 bits (558),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 98/199 (50%), Positives = 143/199 (72%), Gaps = 10/199 (5%)

Query  25   MTTSFLKIAVVLALVRNALGVQQVPPNMALYGLALILSAYVMAPVVHRIGTEVQALTAQA  84
            + T+FLKIA+ L + RNA+GVQQVPPNMALYG+AL  + +VMAPV H +   V+    + 
Sbjct  10   VCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLEL  69

Query  85   GESGTAAPMALDAVLGVAERGV-GPLRAFMLRNSQPAQRDFFLRTARHLWGEEASRDLSE  143
            G++           L  + R V  PL+ FM RN++P     +L  ++++W  E + + S 
Sbjct  70   GNTEK---------LQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  144  DNLLVLTPAFLVSELTAAFQLGFLLYLPFIIIDLIVSNILLAMGMMMVSPVTISMPLKLF  203
            ++LL+  PAF++SEL A+F++GFL+Y+PFI+IDLIVSN+LLA+GM MVSP+T+S+PLKL+
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  204  LFVMVDGWTRLIQGLVLSY  222
            LFVMV GW+RL+++L  SY
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

36) bscR in NC_019382


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  150 bits (554),  Expect = 5e-38, Method: Compositional matrix adjust.
 Identities = 98/199 (50%), Positives = 142/199 (72%), Gaps = 10/199 (5%)

Query  25   MTTSFLKIAVVLALVRNALGVQQVPPNMALYGLALILSAYVMAPVVHRIGTEVQALTAQA  84
            + T+FLKIA+ L + RNA+GVQQVPPNMALYG+AL  + +VMAPV H +   V+    + 
Sbjct  10   VCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLEL  69

Query  85   GESGTAAPMALDAVLGVVERGV-APLRAFMLRNSQPAQRDFFLRTARHLWGEEASRDLSE  143
            G++           L    R V  PL+ FM RN++P     +L  ++++W  E + + S 
Sbjct  70   GNTEK---------LQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  144  DNLLVLTPAFLVSELTAAFQLGFLLYLPFIIIDLIVSNILLAMGMMMVSPVTISMPLKLF  203
            ++LL+  PAF++SEL A+F++GFL+Y+PFI+IDLIVSN+LLA+GM MVSP+T+S+PLKL+
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  204  LFVMVDGWTRLIQGLVLSY  222
            LFVMV GW+RL+++L  SY
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

37) bscR in NC_002927


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  150 bits (554),  Expect = 5e-38, Method: Compositional matrix adjust.
 Identities = 98/199 (50%), Positives = 142/199 (72%), Gaps = 10/199 (5%)

Query  25   MTTSFLKIAVVLALVRNALGVQQVPPNMALYGLALILSAYVMAPVVHRIGTEVQALTAQA  84
            + T+FLKIA+ L + RNA+GVQQVPPNMALYG+AL  + +VMAPV H +   V+    + 
Sbjct  10   VCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLEL  69

Query  85   GESGTAAPMALDAVLGVVERGV-APLRAFMLRNSQPAQRDFFLRTARHLWGEEASRDLSE  143
            G++           L    R V  PL+ FM RN++P     +L  ++++W  E + + S 
Sbjct  70   GNTEK---------LQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  144  DNLLVLTPAFLVSELTAAFQLGFLLYLPFIIIDLIVSNILLAMGMMMVSPVTISMPLKLF  203
            ++LL+  PAF++SEL A+F++GFL+Y+PFI+IDLIVSN+LLA+GM MVSP+T+S+PLKL+
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  204  LFVMVDGWTRLIQGLVLSY  222
            LFVMV GW+RL+++L  SY
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

38) bscR in NC_002928


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  150 bits (554),  Expect = 5e-38, Method: Compositional matrix adjust.
 Identities = 98/199 (50%), Positives = 142/199 (72%), Gaps = 10/199 (5%)

Query  25   MTTSFLKIAVVLALVRNALGVQQVPPNMALYGLALILSAYVMAPVVHRIGTEVQALTAQA  84
            + T+FLKIA+ L + RNA+GVQQVPPNMALYG+AL  + +VMAPV H +   V+    + 
Sbjct  10   VCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLEL  69

Query  85   GESGTAAPMALDAVLGVVERGV-APLRAFMLRNSQPAQRDFFLRTARHLWGEEASRDLSE  143
            G++           L    R V  PL+ FM RN++P     +L  ++++W  E + + S 
Sbjct  70   GNTEK---------LQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  144  DNLLVLTPAFLVSELTAAFQLGFLLYLPFIIIDLIVSNILLAMGMMMVSPVTISMPLKLF  203
            ++LL+  PAF++SEL A+F++GFL+Y+PFI+IDLIVSN+LLA+GM MVSP+T+S+PLKL+
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  204  LFVMVDGWTRLIQGLVLSY  222
            LFVMV GW+RL+++L  SY
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

39) bscR in NC_018828


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  150 bits (554),  Expect = 5e-38, Method: Compositional matrix adjust.
 Identities = 98/199 (50%), Positives = 142/199 (72%), Gaps = 10/199 (5%)

Query  25   MTTSFLKIAVVLALVRNALGVQQVPPNMALYGLALILSAYVMAPVVHRIGTEVQALTAQA  84
            + T+FLKIA+ L + RNA+GVQQVPPNMALYG+AL  + +VMAPV H +   V+    + 
Sbjct  10   VCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLEL  69

Query  85   GESGTAAPMALDAVLGVVERGV-APLRAFMLRNSQPAQRDFFLRTARHLWGEEASRDLSE  143
            G++           L    R V  PL+ FM RN++P     +L  ++++W  E + + S 
Sbjct  70   GNTEK---------LQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  144  DNLLVLTPAFLVSELTAAFQLGFLLYLPFIIIDLIVSNILLAMGMMMVSPVTISMPLKLF  203
            ++LL+  PAF++SEL A+F++GFL+Y+PFI+IDLIVSN+LLA+GM MVSP+T+S+PLKL+
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  204  LFVMVDGWTRLIQGLVLSY  222
            LFVMV GW+RL+++L  SY
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

40) C770_GR4pC1264 in NC_019848


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  150 bits (554),  Expect = 5e-38, Method: Compositional matrix adjust.
 Identities = 89/199 (45%), Positives = 147/199 (74%), Gaps = 0/199 (0%)

Query  17   IGLIPLAVVTMTGFLKISIVLFLIRNALGIQQSPPNLVLYGVALILTVYVTTPLVGEMYR  76
            ++LIP+ ++  T+FLKI++ L++ RNA+G+QQ PPN+ LYG+AL  T++V +P+  EM +
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  77   TLSSEPVDVQSIDSMMRAADSLRVPLQTHLKRYTDENERQFFMQATERIWSEEARAEVKT  136
             +  +P+++ + + +  +A ++  PLQ  + R TD +    +++ T+R+W+ E   +   
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  137  DSLLILVPAFVSSELTRAFEIGFLLYLPFLVIDLIVSTVLMAMGMMMVSPTLISIPLKIF  196
            + LL+ +PAFV SEL  +FEIGFL+Y+PF+VIDLIVS +L+A+GM MVSP  +S+PLK++
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  197  LFVAVNGWSRLMHGLILSY  215
            LFV V+GWSRL+++L+ SY
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

41) SFHH103_04957 in NC_016815


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  150 bits (551),  Expect = 8e-38, Method: Compositional matrix adjust.
 Identities = 90/199 (46%), Positives = 145/199 (73%), Gaps = 0/199 (0%)

Query  18   IGLIPLAVVTMTGFLKISIVLFLIRNALGIQQSPPNLVLYGVALILTVYVTTPLVGEMYR  77
            ++LIP+ ++  T+FLKI++ L++ RNA+G+QQ PPN+ LYG+AL  T++V +P+  EM +
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  78   TLSSEQVDMQSMDSMMRAANQLRAPLQAHLTRYTDENERQFFLQATERIWSEEARASVKT  137
             +  + +++ + + +  +A  +  PLQ  +TR TD +    +L+ T+R+W+ E       
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  138  DSLLILVPAFVSSELTRAFEIGFLLYLPFLVIDLIVSTVLMAMGMMMVSPTLISIPLKIF  197
            + LL+ +PAFV SEL  +FEIGFL+Y+PF+VIDLIVS +L+A+GM MVSP  +S+PLK++
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  198  LFVAVNGWSRLMHGLILSY  216
            LFV V+GWSRL+++L+ SY
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

42) rhcR in NC_012586


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  150 bits (551),  Expect = 9e-38, Method: Compositional matrix adjust.
 Identities = 90/199 (46%), Positives = 145/199 (73%), Gaps = 0/199 (0%)

Query  18   IGLIPLAVVTMTGFLKISIVLFLIRNALGIQQSPPNLVLYGVALILTVYVTTPLVGEMYR  77
            ++LIP+ ++  T+FLKI++ L++ RNA+G+QQ PPN+ LYG+AL  T++V +P+  EM +
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  78   TLSSEQVDMQSMDSMVRAANQLRAPLQAHLTRYTDENERQFFLQATERIWSEEARASVKT  137
             +  + +++ + + +  +A  +  PLQ  +TR TD +    +L+ T+R+W+ E       
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  138  DSLLILVPAFVSSELTRAFEIGFLLYLPFLVIDLIVSTVLMAMGMMMVSPTLISIPLKIF  197
            + LL+ +PAFV SEL  +FEIGFL+Y+PF+VIDLIVS +L+A+GM MVSP  +S+PLK++
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  198  LFVAVNGWSRLMHGLILSY  216
            LFV V+GWSRL+++L+ SY
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

43) USDA257_c21640 in NC_018000


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  148 bits (546),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 90/199 (46%), Positives = 145/199 (73%), Gaps = 0/199 (0%)

Query  18   IGLIPLAVVTMTGFLKISIVLFLIRNALGIQQSPPNLVLYGVALILTVYVTTPLVGEMYR  77
            ++LIP+ ++  T+FLKI++ L++ RNA+G+QQ PPN+ LYG+AL  T++V +P+  EM +
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  78   TLSSEQVDVQSMDSMVRAADQLRAPLQAHLTRYTDENERQFFLQATERIWSEEARASVKT  137
             +  + +++ + + +  +A  +  PLQ  +TR TD +    +L+ T+R+W+ E       
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  138  DSLLILVPAFVSSELTRAFEIGFLLYLPFLVIDLIVSTVLMAMGMMMVSPTLISIPLKIF  197
            + LL+ +PAFV SEL  +FEIGFL+Y+PF+VIDLIVS +L+A+GM MVSP  +S+PLK++
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  198  LFVAVNGWSRLMHGLILSY  216
            LFV V+GWSRL+++L+ SY
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

44) NH44784_014541 in NC_021285


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  147 bits (542),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 93/197 (48%), Positives = 145/197 (74%), Gaps = 7/197 (3%)

Query  25   MTTSFLKIAVVLTLVRNALGVQQVPPNMALYGLALILSAYVMGPVVMQIGDELRAPPAVA  84
            + T+FLKIA+ L + RNA+GVQQVPPNMALYG+AL  + +VM+PV  ++ + ++  P   
Sbjct  10   VCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPL--  67

Query  85   APGTPEPDRLEGILEAVARGAEPMRAFMLKNSRAEQRDFFLRTARGLWGEQQARNLKEDD  144
                 + ++L++   +V    EP++ FM +N+ ++    +L  ++ +W  + A +   +D
Sbjct  68   --ELGNTEKLQASARTVI---EPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKND  122

Query  145  LLVLIPSFLLSELTAAFQIGFLLYLPFVIIDLIVSNILLAMGMMMVSPVTISMPLKLFLF  204
            LL+ IP+F+LSEL A+F+IGFL+Y+PF++IDLIVSN+LLA+GM MVSP+T+S+PLKL+LF
Sbjct  123  LLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLF  182

Query  205  VMVDGWTRLIQGLVLSY  221
            VMV GW+RL+++L  SY
Sbjct  183  VMVSGWSRLLDSLFYSY  199

45) DvMF_2439 in NC_011769


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  146 bits (536),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 89/204 (44%), Positives = 148/204 (73%), Gaps = 9/204 (4%)

Query  16   LGLAPFFLMMVTSYVKIVVVTSLVRNALGVQQVPPAMVMNGLAIILSIFIMAPMVESTLD  75
            ++L PF+L++ T+++KI +   + RNA+GVQQVPP M + G+A+  ++F+MAP+ +   +
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  76   ILKTVRVSEQPEPREVVELLDRAS----PPLRDFLSRNADDKVITAFMGTAKRIWPKERH  131
                 RV ++P      E L+ ++     PL+ F++RN+D  V++ +++ ++R+WPKE  
Sbjct  61   -----RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMA  115

Query  132  DTIRRENLLILVPAFTISELTKAFQIGFLLYLPFVAIDLIISNILLAMGMMMVSPMTISL  191
            D   +++LL+ +PAF +SEL  +F+IGFL+Y+PF+ IDLI+SN+LLA+GM MVSPMT+SL
Sbjct  116  DQASKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSL  175

Query  192  PFKLLLFVTLDGWLKISQGLLLSY  215
            P+KLLLFV + GW ++ ++L+ SY
Sbjct  176  PLKLLLFVMVSGWSRLLDSLFYSY  199

46) ascR in NC_009350


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  145 bits (535),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 92/195 (48%), Positives = 148/195 (76%), Gaps = 0/195 (0%)

Query  21   PFIAVMATSFVKLAVVFSLLRNALGVQQIPPNMAMYGLAIILSIYVMAPVGFATQDYLRQ  80
            PF+ ++ T+F+K+A+ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   Q+ +++
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  81   NEVSLAKSESVEKFLDEGIAPYRDFLKKQIKPREHAFFIDSTKQLWPSKYADRLEPDSLL  140
            + + L+++E ++      I P + F+ ++  P   A ++D+T+++WP   AD+   + LL
Sbjct  65   HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLL  124

Query  141  ILLPAFTVSELSRAFEIGFLIYLPFIAIDLIISNILLAMGMMMVSPMTISlpfklllfvl  200
            + +PAF +SEL  +FEIGFLIY+PFI IDLI+SN+LLA+GM MVSPMT+SLP+KLLLFV+
Sbjct  125  LAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVM  184

Query  201  lDGWARLTHGLVISY  215
            + GW+RL ++L  SY
Sbjct  185  VSGWSRLLDSLFYSY  199

47) ETAC_04225 in NC_020796


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  145 bits (535),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 85/192 (45%), Positives = 145/192 (76%), Gaps = 1/192 (0%)

Query  24   IVMGTSFLKLSVVFALLRNALGIQQIPPNIALYGLALILTLFIMTPVGTAVQARLADAPA  83
            +++ T+FLK+++ + + RNA+G+QQ+PPN+ALYG+AL  T+F+M+PV+  +Q R+ D P 
Sbjct  8    LIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPL  67

Query  84   E-AQTTLLARLSDNTLDPYRQFLRQHTSATQLHFFRQVATKSWPASVREQISDDSLLLLM  142
            E ++T  L   +   ++P ++F+ ++T +  +  + + + + WP  + +Q S + LLL +
Sbjct  68   ELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFAVSQLVEAFQIGLLLFLPFIAIDLIVSNILLAMGMMMVSPMTISMPFKLLVFILVGG  202
            PAF +S+L  +F+IG+L+++PFI IDLIVSN+LLA+GM MVSPMT+S+P+KLL+F++V+G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDKLLGQLLLSY  214
            W +LL+ L+ SY
Sbjct  188  WSRLLDSLFYSY  199

48) esaR in NC_013508


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  145 bits (535),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 85/192 (45%), Positives = 145/192 (76%), Gaps = 1/192 (0%)

Query  24   IVMGTSFLKLSVVFALLRNALGIQQIPPNIALYGLALILTLFIMTPVGTAVQARLADAPA  83
            +++ T+FLK+++ + + RNA+G+QQ+PPN+ALYG+AL  T+F+M+PV+  +Q R+ D P 
Sbjct  8    LIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPL  67

Query  84   E-AQTTLLARLSDNTLDPYRQFLRQHTSATQLHFFRQVATKSWPASVREQISDDSLLLLM  142
            E ++T  L   +   ++P ++F+ ++T +  +  + + + + WP  + +Q S + LLL +
Sbjct  68   ELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFAVSQLVEAFQIGLLLFLPFIAIDLIVSNILLAMGMMMVSPMTISMPFKLLVFILVGG  202
            PAF +S+L  +F+IG+L+++PFI IDLIVSN+LLA+GM MVSPMT+S+P+KLL+F++V+G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDKLLGQLLLSY  214
            W +LL+ L+ SY
Sbjct  188  WSRLLDSLFYSY  199

49) esaR in NC_017309


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  145 bits (535),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 85/192 (45%), Positives = 145/192 (76%), Gaps = 1/192 (0%)

Query  24   IVMGTSFLKLSVVFALLRNALGIQQIPPNIALYGLALILTLFIMTPVGTAVQARLADAPA  83
            +++ T+FLK+++ + + RNA+G+QQ+PPN+ALYG+AL  T+F+M+PV+  +Q R+ D P 
Sbjct  8    LIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPL  67

Query  84   E-AQTTLLARLSDNTLDPYRQFLRQHTSATQLHFFRQVATKSWPASVREQISDDSLLLLM  142
            E ++T  L   +   ++P ++F+ ++T +  +  + + + + WP  + +Q S + LLL +
Sbjct  68   ELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFAVSQLVEAFQIGLLLFLPFIAIDLIVSNILLAMGMMMVSPMTISMPFKLLVFILVGG  202
            PAF +S+L  +F+IG+L+++PFI IDLIVSN+LLA+GM MVSPMT+S+P+KLL+F++V+G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDKLLGQLLLSY  214
            W +LL+ L+ SY
Sbjct  188  WSRLLDSLFYSY  199

50) PADK2_17235 in NC_018080


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  145 bits (533),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 87/196 (45%), Positives = 148/196 (76%), Gaps = 0/196 (0%)

Query  20   VPFIAVMATSFIKMTVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATRDYLR  79
            +PF+ ++ T+F+K+++ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   ++ ++
Sbjct  4    IPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVH  63

Query  80   NHDVSLNDSASVERFLDEGMAPYRNFLKRQIQEREHTFFMESTRQVWPSEYAERLDPDSL  139
            +H + L ++  ++      + P + F+ R+ +    + ++++T+++WP E A++   + L
Sbjct  64   DHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDL  123

Query  140  LILLPAFTVSELTRAFEIGFLIYLPFIAIDLIISNILLAMGMMMVSPMTISlpfklllfv  199
            L+ +PAF +SEL  +FEIGFLIY+PFI IDLI+SN+LLA+GM MVSPMT+SLP+KLLLFV
Sbjct  124  LLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFV  183

Query  200  llDGWARLTHGLVISY  215
            ++ GW+RL ++L  SY
Sbjct  184  MVSGWSRLLDSLFYSY  199

51) pscR in NC_017548


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  145 bits (534),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 87/196 (45%), Positives = 149/196 (77%), Gaps = 0/196 (0%)

Query  20   VPFIAVMATSFIKMTVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATRDYLR  79
            +PF+ ++ T+F+K+++ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   ++ ++
Sbjct  4    IPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVH  63

Query  80   NHDVSLSDSASVERFLDEGMAPYRNFLKRQIQEREHTFFMESTRQVWPSEYAERLDPDSL  139
            +H + L+++  ++      + P + F+ R+ +    + ++++T+++WP E A++   + L
Sbjct  64   DHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDL  123

Query  140  LILLPAFTVSELTRAFEIGFLIYLPFIAIDLIISNILLAMGMMMVSPMTISlpfklllfv  199
            L+ +PAF +SEL  +FEIGFLIY+PFI IDLI+SN+LLA+GM MVSPMT+SLP+KLLLFV
Sbjct  124  LLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFV  183

Query  200  llDGWARLTHGLVISY  215
            ++ GW+RL ++L  SY
Sbjct  184  MVSGWSRLLDSLFYSY  199

52) pscR in NC_017549


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  145 bits (534),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 87/196 (45%), Positives = 149/196 (77%), Gaps = 0/196 (0%)

Query  20   VPFIAVMATSFIKMTVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATRDYLR  79
            +PF+ ++ T+F+K+++ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   ++ ++
Sbjct  4    IPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVH  63

Query  80   NHDVSLSDSASVERFLDEGMAPYRNFLKRQIQEREHTFFMESTRQVWPSEYAERLDPDSL  139
            +H + L+++  ++      + P + F+ R+ +    + ++++T+++WP E A++   + L
Sbjct  64   DHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDL  123

Query  140  LILLPAFTVSELTRAFEIGFLIYLPFIAIDLIISNILLAMGMMMVSPMTISlpfklllfv  199
            L+ +PAF +SEL  +FEIGFLIY+PFI IDLI+SN+LLA+GM MVSPMT+SLP+KLLLFV
Sbjct  124  LLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFV  183

Query  200  llDGWARLTHGLVISY  215
            ++ GW+RL ++L  SY
Sbjct  184  MVSGWSRLLDSLFYSY  199

53) pscR in NC_002516


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  145 bits (534),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 87/196 (45%), Positives = 149/196 (77%), Gaps = 0/196 (0%)

Query  20   VPFIAVMATSFIKMTVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATRDYLR  79
            +PF+ ++ T+F+K+++ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   ++ ++
Sbjct  4    IPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVH  63

Query  80   NHDVSLSDSASVERFLDEGMAPYRNFLKRQIQEREHTFFMESTRQVWPSEYAERLDPDSL  139
            +H + L+++  ++      + P + F+ R+ +    + ++++T+++WP E A++   + L
Sbjct  64   DHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDL  123

Query  140  LILLPAFTVSELTRAFEIGFLIYLPFIAIDLIISNILLAMGMMMVSPMTISlpfklllfv  199
            L+ +PAF +SEL  +FEIGFLIY+PFI IDLI+SN+LLA+GM MVSPMT+SLP+KLLLFV
Sbjct  124  LLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFV  183

Query  200  llDGWARLTHGLVISY  215
            ++ GW+RL ++L  SY
Sbjct  184  MVSGWSRLLDSLFYSY  199

54) ssaR in NC_021577


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  145 bits (534),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 87/196 (45%), Positives = 149/196 (77%), Gaps = 0/196 (0%)

Query  20   VPFIAVMATSFIKMTVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATRDYLR  79
            +PF+ ++ T+F+K+++ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   ++ ++
Sbjct  4    IPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVH  63

Query  80   NHDVSLSDSASVERFLDEGMAPYRNFLKRQIQEREHTFFMESTRQVWPSEYAERLDPDSL  139
            +H + L+++  ++      + P + F+ R+ +    + ++++T+++WP E A++   + L
Sbjct  64   DHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDL  123

Query  140  LILLPAFTVSELTRAFEIGFLIYLPFIAIDLIISNILLAMGMMMVSPMTISlpfklllfv  199
            L+ +PAF +SEL  +FEIGFLIY+PFI IDLI+SN+LLA+GM MVSPMT+SLP+KLLLFV
Sbjct  124  LLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFV  183

Query  200  llDGWARLTHGLVISY  215
            ++ GW+RL ++L  SY
Sbjct  184  MVSGWSRLLDSLFYSY  199

55) pscR in NC_008463


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  145 bits (534),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 87/196 (45%), Positives = 149/196 (77%), Gaps = 0/196 (0%)

Query  20   VPFIAVMATSFIKMTVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATRDYLR  79
            +PF+ ++ T+F+K+++ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   ++ ++
Sbjct  4    IPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVH  63

Query  80   NHDVSLSDSASVERFLDEGMAPYRNFLKRQIQEREHTFFMESTRQVWPSEYAERLDPDSL  139
            +H + L+++  ++      + P + F+ R+ +    + ++++T+++WP E A++   + L
Sbjct  64   DHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDL  123

Query  140  LILLPAFTVSELTRAFEIGFLIYLPFIAIDLIISNILLAMGMMMVSPMTISlpfklllfv  199
            L+ +PAF +SEL  +FEIGFLIY+PFI IDLI+SN+LLA+GM MVSPMT+SLP+KLLLFV
Sbjct  124  LLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFV  183

Query  200  llDGWARLTHGLVISY  215
            ++ GW+RL ++L  SY
Sbjct  184  MVSGWSRLLDSLFYSY  199

56) G655_16715 in NC_020912


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  145 bits (532),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 87/196 (45%), Positives = 149/196 (77%), Gaps = 0/196 (0%)

Query  20   VPFIAVMATSFIKMTVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATRDYLR  79
            +PF+ ++ T+F+K+++ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   ++ ++
Sbjct  4    IPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVH  63

Query  80   NHDVSLSDSASVERFLDEGMAPYRNFLKRQIQEREHTFFMESTRQVWPSEYAERLDPDSL  139
            +H + L+++  ++      + P + F+ R+ +    + ++++T+++WP E A++   + L
Sbjct  64   DHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDL  123

Query  140  LILLPAFTVSELTRAFEIGFLIYLPFIAIDLIISNILLAMGMMMVSPMTISlpfklllfv  199
            L+ +PAF +SEL  +FEIGFLIY+PFI IDLI+SN+LLA+GM MVSPMT+SLP+KLLLFV
Sbjct  124  LLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFV  183

Query  200  llDGWARLTHGLVISY  215
            ++ GW+RL ++L  SY
Sbjct  184  MVSGWSRLLDSLFYSY  199

57) SVI_2230 in NC_014012


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  145 bits (532),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 83/199 (42%), Positives = 147/199 (74%), Gaps = 0/199 (0%)

Query  17   LSILPLFAVMGTSFLKLSIVLSMLRNALGIQQIPPNMAIYGLSLILTLFIMAPIGMEIND  76
            +S++P++ ++ T+FLK+++ L + RNA+G+QQ+PPNMA+YG++L  T+F+MAP++ E+++
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  77   NLKVHPIVFDSANIIEQVNTLAIIPYRDFLEKNTSKTQLDFFANIGHKTWPDKYQDVLSK  136
             +  HP+ +++++ ++      I P + F+ +NT    +  + +  ++ WP    D  SK
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  137  DSLFVMLPAFTMSQLIEAFKIGLLIYLPFVAIDLIVSNILLAMGMMMVSPMTISLPFKLL  196
            + L++ +PAF +S+L  +F IG+LIY+PF+ IDLIVSN+LLA+GM MVSPMT+SLP+KLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  197  IFILMGGWEKLVSQLMVSF  215
            +F++++GW +L+  L  S+
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

58) Sbal175_2391 in NC_017571


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  144 bits (530),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 82/199 (42%), Positives = 143/199 (72%), Gaps = 0/199 (0%)

Query  17   LSLLPLFAVMGTSFLKLAIVFSMLRNALGIQQIPPNMAIYGLALILTLFTMAPVGMAIND  76
            +SL+P++ ++ T+FLK+A+ + + RNA+G+QQ+PPNMA+YG+AL  T+F MAPV+  +++
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  77   NLKATPIVFDAPNVFEQINTEAIAPYRAFLDKNTSNTQIEFFANIGHKVWPEKYQQVLTK  136
             +   P+ ++  + ++      I P + F+ +NT    +  + +  +++WP    +  +K
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  137  DSLLVMVPAFTMSQLIEAFKIGLLIYLPFVAIDLIVSNILLAMGMMMVSPMTIALPFKLL  196
            + LL+ +PAF +S+L  +F IG+LIY+PF+ IDLIVSN+LLA+GM MVSPMT++LP+KLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  197  IFILMGGWEKLISQLMMSF  215
            +F++++GW +L+  L  S+
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

59) Sbal117_2090 in NC_017579


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  144 bits (530),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 82/199 (42%), Positives = 143/199 (72%), Gaps = 0/199 (0%)

Query  17   LSLLPLFAVMGTSFLKLAIVFSMLRNALGIQQIPPNMAIYGLALILTLFTMAPVGMAIND  76
            +SL+P++ ++ T+FLK+A+ + + RNA+G+QQ+PPNMA+YG+AL  T+F MAPV+  +++
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  77   NLKATPIVFDAPNVFEQINTEAIAPYRAFLDKNTSNTQIEFFANIGHKVWPEKYQQVLTK  136
             +   P+ ++  + ++      I P + F+ +NT    +  + +  +++WP    +  +K
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  137  DSLLVMVPAFTMSQLIEAFKIGLLIYLPFVAIDLIVSNILLAMGMMMVSPMTIALPFKLL  196
            + LL+ +PAF +S+L  +F IG+LIY+PF+ IDLIVSN+LLA+GM MVSPMT++LP+KLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  197  IFILMGGWEKLISQLMMSF  215
            +F++++GW +L+  L  S+
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

60) Sbal_1974 in NC_009052


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  144 bits (530),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 82/199 (42%), Positives = 143/199 (72%), Gaps = 0/199 (0%)

Query  17   LSLLPLFAVMGTSFLKLAIVFSMLRNALGIQQIPPNMAIYGLALILTLFTMAPVGMAIND  76
            +SL+P++ ++ T+FLK+A+ + + RNA+G+QQ+PPNMA+YG+AL  T+F MAPV+  +++
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  77   NLKATPIVFDAPNVFEQINTEAIAPYRAFLDKNTSNTQIEFFANIGHKVWPEKYQQVLTK  136
             +   P+ ++  + ++      I P + F+ +NT    +  + +  +++WP    +  +K
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  137  DSLLVMVPAFTMSQLIEAFKIGLLIYLPFVAIDLIVSNILLAMGMMMVSPMTIALPFKLL  196
            + LL+ +PAF +S+L  +F IG+LIY+PF+ IDLIVSN+LLA+GM MVSPMT++LP+KLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  197  IFILMGGWEKLISQLMMSF  215
            +F++++GW +L+  L  S+
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

61) Sbal195_2278 in NC_009997


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  144 bits (530),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 82/199 (42%), Positives = 143/199 (72%), Gaps = 0/199 (0%)

Query  17   LSLLPLFAVMGTSFLKLAIVFSMLRNALGIQQIPPNMAIYGLALILTLFTMAPVGMAIND  76
            +SL+P++ ++ T+FLK+A+ + + RNA+G+QQ+PPNMA+YG+AL  T+F MAPV+  +++
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  77   NLKATPIVFDAPNVFEQINTEAIAPYRAFLEKNTSNTQIEFFANIGHKVWPEKYQQVLTK  136
             +   P+ ++  + ++      I P + F+ +NT    +  + +  +++WP    +  +K
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  137  DSLLVMVPAFTMSQLIEAFKIGLLIYLPFVAIDLIVSNILLAMGMMMVSPMTIALPFKLL  196
            + LL+ +PAF +S+L  +F IG+LIY+PF+ IDLIVSN+LLA+GM MVSPMT++LP+KLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  197  IFILMGGWEKLISQLMMSF  215
            +F++++GW +L+  L  S+
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

62) Sbal678_2288 in NC_016901


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  144 bits (530),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 82/199 (42%), Positives = 143/199 (72%), Gaps = 0/199 (0%)

Query  17   LSLLPLFAVMGTSFLKLAIVFSMLRNALGIQQIPPNMAIYGLALILTLFTMAPVGMAIND  76
            +SL+P++ ++ T+FLK+A+ + + RNA+G+QQ+PPNMA+YG+AL  T+F MAPV+  +++
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  77   NLKATPIVFDAPNVFEQINTEAIAPYRAFLEKNTSNTQIEFFANIGHKVWPEKYQQVLTK  136
             +   P+ ++  + ++      I P + F+ +NT    +  + +  +++WP    +  +K
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  137  DSLLVMVPAFTMSQLIEAFKIGLLIYLPFVAIDLIVSNILLAMGMMMVSPMTIALPFKLL  196
            + LL+ +PAF +S+L  +F IG+LIY+PF+ IDLIVSN+LLA+GM MVSPMT++LP+KLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  197  IFILMGGWEKLISQLMMSF  215
            +F++++GW +L+  L  S+
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

63) RHE_PD00059 in NC_004041


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  143 bits (525),  Expect = 9e-36, Method: Compositional matrix adjust.
 Identities = 85/199 (43%), Positives = 141/199 (71%), Gaps = 0/199 (0%)

Query  17   ISMLPVIAVIATSFTKISVVLLIVRNAIGIQQTPPNLLVFAIAIVLSAFVMNPVLQNSWQ  76
            +S++P + ++ T+F KI++ LLI RNAIG+QQ PPN+ +++IA+  + FVM PV ++  Q
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  77   LLLAHSGDFGTVSGMADGMIKVAAPLKDFMLKFSDAEVRDFFVQASQKIWANAPATPIAS  136
             +  H+ ++G    +  +   V  PL+ FM + +D++V   +++ +Q++W++  A   + 
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  137  DDITVLTPSFLVSELTRAFEIGFLIYLPFLMIDFAVSAILVALGMQMMSPTVVSTPLKLL  196
            +D+ +  P+F++SEL  +FEIGFLIY+PF++ID+ VS +L+ALGMQM+SP  +S PLKLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  197  LFVSIDGWRRLLEGLVLSY  215
            LFV + GW RLL++L  SY
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

64) hrcR in NC_010996


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  143 bits (525),  Expect = 9e-36, Method: Compositional matrix adjust.
 Identities = 85/199 (43%), Positives = 141/199 (71%), Gaps = 0/199 (0%)

Query  17   ISMLPVIAVIATSFTKISVVLLIVRNAIGIQQTPPNLLVFAIAIVLSAFVMNPVLQNSWQ  76
            +S++P + ++ T+F KI++ LLI RNAIG+QQ PPN+ +++IA+  + FVM PV ++  Q
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  77   LLLAHSGDFGTVSGMADGMIKVAAPLKDFMLKFSDAEVRDFFVQASQKIWANAPATSIAS  136
             +  H+ ++G    +  +   V  PL+ FM + +D++V   +++ +Q++W++  A   + 
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  137  DDITVLTPSFLVSELTRAFEIGFLIYLPFLMIDFAVSAILVALGMQMMSPTVVSTPLKLL  196
            +D+ +  P+F++SEL  +FEIGFLIY+PF++ID+ VS +L+ALGMQM+SP  +S PLKLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  197  LFVSIDGWRRLLEGLVLSY  215
            LFV + GW RLL++L  SY
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

65) Y11_35451 in NC_017564


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 92/193 (48%), Positives = 139/193 (73%), Gaps = 0/193 (0%)

Query  24   MVMGTSFLKLSIVLSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVHARLQDEPL  83
            +++ T+FLK+++ L + RNA+GVQQVPPN+A+YG+AL  T+F+MAPV+ +++ R++D+PL
Sbjct  8    LIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPL  67

Query  84   PNDLGALLYHIDEHALEPYRDFLQRNTDAAQVHFFNDIVQTKWPVRYRDTIKPNSLLILM  143
              +    L       +EP + F+ RNTD+  V  + D  Q  WP    D    N LL+ +
Sbjct  68   ELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  144  PAFTLSQLTEAFKIGLLLYLPFVAIDLIVSNILLAMGMMMVSPITISLPFKLLIFILIDG  203
            PAF LS+L  +F IG+L+Y+PF+ IDLIVSN+LLA+GM MVSP+T+SLP+KLL+F+++ G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  204  WGLLLGQLVGSYL  216
            W+ LL+ L  SY+
Sbjct  188  WSRLLDSLFYSYM  200

66) yscR in NC_010157


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 88/191 (47%), Positives = 147/191 (77%), Gaps = 0/191 (0%)

Query  25   VMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVS  84
            ++ T+F+K+A+ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   Q+ ++ + + 
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  85   LTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSLFILLP  144
            L N E ++      + P + F+ ++ +++  + ++D+T+++WPK+ AD+   + L++ +P
Sbjct  69   LGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIP  128

Query  145  AFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfvllDGW  204
            AF +SEL  +FEIGFLIY+PFIVIDL++SN+LLA+GM MVSPMT+SLP+KLLLFV++ GW
Sbjct  129  AFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGW  188

Query  205  TRLTHGLVISY  215
            +RL ++L  SY
Sbjct  189  SRLLDSLFYSY  199

67) YPA_CD0018 in NC_008122


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 88/191 (47%), Positives = 147/191 (77%), Gaps = 0/191 (0%)

Query  25   VMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVS  84
            ++ T+F+K+A+ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   Q+ ++ + + 
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  85   LTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSLFILLP  144
            L N E ++      + P + F+ ++ +++  + ++D+T+++WPK+ AD+   + L++ +P
Sbjct  69   LGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIP  128

Query  145  AFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfvllDGW  204
            AF +SEL  +FEIGFLIY+PFIVIDL++SN+LLA+GM MVSPMT+SLP+KLLLFV++ GW
Sbjct  129  AFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGW  188

Query  205  TRLTHGLVISY  215
            +RL ++L  SY
Sbjct  189  SRLLDSLFYSY  199

68) yscR in NC_005813


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 88/191 (47%), Positives = 147/191 (77%), Gaps = 0/191 (0%)

Query  25   VMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVS  84
            ++ T+F+K+A+ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   Q+ ++ + + 
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  85   LTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSLFILLP  144
            L N E ++      + P + F+ ++ +++  + ++D+T+++WPK+ AD+   + L++ +P
Sbjct  69   LGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIP  128

Query  145  AFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfvllDGW  204
            AF +SEL  +FEIGFLIY+PFIVIDL++SN+LLA+GM MVSPMT+SLP+KLLLFV++ GW
Sbjct  129  AFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGW  188

Query  205  TRLTHGLVISY  215
            +RL ++L  SY
Sbjct  189  SRLLDSLFYSY  199

69) yscR in NC_003131


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 88/191 (47%), Positives = 147/191 (77%), Gaps = 0/191 (0%)

Query  25   VMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVS  84
            ++ T+F+K+A+ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   Q+ ++ + + 
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  85   LTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSLFILLP  144
            L N E ++      + P + F+ ++ +++  + ++D+T+++WPK+ AD+   + L++ +P
Sbjct  69   LGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIP  128

Query  145  AFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfvllDGW  204
            AF +SEL  +FEIGFLIY+PFIVIDL++SN+LLA+GM MVSPMT+SLP+KLLLFV++ GW
Sbjct  129  AFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGW  188

Query  205  TRLTHGLVISY  215
            +RL ++L  SY
Sbjct  189  SRLLDSLFYSY  199

70) yscR in NC_017153


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 88/191 (47%), Positives = 147/191 (77%), Gaps = 0/191 (0%)

Query  25   VMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVS  84
            ++ T+F+K+A+ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   Q+ ++ + + 
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  85   LTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSLFILLP  144
            L N E ++      + P + F+ ++ +++  + ++D+T+++WPK+ AD+   + L++ +P
Sbjct  69   LGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIP  128

Query  145  AFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfvllDGW  204
            AF +SEL  +FEIGFLIY+PFIVIDL++SN+LLA+GM MVSPMT+SLP+KLLLFV++ GW
Sbjct  129  AFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGW  188

Query  205  TRLTHGLVISY  215
            +RL ++L  SY
Sbjct  189  SRLLDSLFYSY  199

71) yscR in NC_017157


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 88/191 (47%), Positives = 147/191 (77%), Gaps = 0/191 (0%)

Query  25   VMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVS  84
            ++ T+F+K+A+ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   Q+ ++ + + 
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  85   LTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSLFILLP  144
            L N E ++      + P + F+ ++ +++  + ++D+T+++WPK+ AD+   + L++ +P
Sbjct  69   LGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIP  128

Query  145  AFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfvllDGW  204
            AF +SEL  +FEIGFLIY+PFIVIDL++SN+LLA+GM MVSPMT+SLP+KLLLFV++ GW
Sbjct  129  AFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGW  188

Query  205  TRLTHGLVISY  215
            +RL ++L  SY
Sbjct  189  SRLLDSLFYSY  199

72) YPDSF_3973 in NC_009377


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 88/191 (47%), Positives = 147/191 (77%), Gaps = 0/191 (0%)

Query  25   VMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVS  84
            ++ T+F+K+A+ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   Q+ ++ + + 
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  85   LTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSLFILLP  144
            L N E ++      + P + F+ ++ +++  + ++D+T+++WPK+ AD+   + L++ +P
Sbjct  69   LGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIP  128

Query  145  AFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfvllDGW  204
            AF +SEL  +FEIGFLIY+PFIVIDL++SN+LLA+GM MVSPMT+SLP+KLLLFV++ GW
Sbjct  129  AFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGW  188

Query  205  TRLTHGLVISY  215
            +RL ++L  SY
Sbjct  189  SRLLDSLFYSY  199

73) yscR in NC_014017


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 88/191 (47%), Positives = 147/191 (77%), Gaps = 0/191 (0%)

Query  25   VMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVS  84
            ++ T+F+K+A+ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   Q+ ++ + + 
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  85   LTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSLFILLP  144
            L N E ++      + P + F+ ++ +++  + ++D+T+++WPK+ AD+   + L++ +P
Sbjct  69   LGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIP  128

Query  145  AFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfvllDGW  204
            AF +SEL  +FEIGFLIY+PFIVIDL++SN+LLA+GM MVSPMT+SLP+KLLLFV++ GW
Sbjct  129  AFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGW  188

Query  205  TRLTHGLVISY  215
            +RL ++L  SY
Sbjct  189  SRLLDSLFYSY  199

74) pYV0071 in NC_006153


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 88/191 (47%), Positives = 147/191 (77%), Gaps = 0/191 (0%)

Query  25   VMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVS  84
            ++ T+F+K+A+ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   Q+ ++ + + 
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  85   LTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSLFILLP  144
            L N E ++      + P + F+ ++ +++  + ++D+T+++WPK+ AD+   + L++ +P
Sbjct  69   LGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIP  128

Query  145  AFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfvllDGW  204
            AF +SEL  +FEIGFLIY+PFIVIDL++SN+LLA+GM MVSPMT+SLP+KLLLFV++ GW
Sbjct  129  AFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGW  188

Query  205  TRLTHGLVISY  215
            +RL ++L  SY
Sbjct  189  SRLLDSLFYSY  199

75) YPTS_4289 in NC_010635


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 88/191 (47%), Positives = 147/191 (77%), Gaps = 0/191 (0%)

Query  25   VMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVS  84
            ++ T+F+K+A+ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   Q+ ++ + + 
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  85   LTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSLFILLP  144
            L N E ++      + P + F+ ++ +++  + ++D+T+++WPK+ AD+   + L++ +P
Sbjct  69   LGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIP  128

Query  145  AFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfvllDGW  204
            AF +SEL  +FEIGFLIY+PFIVIDL++SN+LLA+GM MVSPMT+SLP+KLLLFV++ GW
Sbjct  129  AFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGW  188

Query  205  TRLTHGLVISY  215
            +RL ++L  SY
Sbjct  189  SRLLDSLFYSY  199

76) yscR in NC_008791


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  141 bits (520),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 88/191 (47%), Positives = 147/191 (77%), Gaps = 0/191 (0%)

Query  25   VMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVS  84
            ++ T+F+K+A+ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   Q+ ++ + + 
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  85   LTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSLFILLP  144
            L N E ++      + P + F+ ++ +++  + ++D+T+++WPK+ AD+   + L++ +P
Sbjct  69   LGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIP  128

Query  145  AFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfvllDGW  204
            AF +SEL  +FEIGFLIY+PFIVIDL++SN+LLA+GM MVSPMT+SLP+KLLLFV++ GW
Sbjct  129  AFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGW  188

Query  205  TRLTHGLVISY  215
            +RL ++L  SY
Sbjct  189  SRLLDSLFYSY  199

77) YE105_P0026 in NC_015475


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  141 bits (520),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 88/191 (47%), Positives = 147/191 (77%), Gaps = 0/191 (0%)

Query  25   VMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVS  84
            ++ T+F+K+A+ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   Q+ ++ + + 
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  85   LTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSLFILLP  144
            L N E ++      + P + F+ ++ +++  + ++D+T+++WPK+ AD+   + L++ +P
Sbjct  69   LGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIP  128

Query  145  AFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfvllDGW  204
            AF +SEL  +FEIGFLIY+PFIVIDL++SN+LLA+GM MVSPMT+SLP+KLLLFV++ GW
Sbjct  129  AFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGW  188

Query  205  TRLTHGLVISY  215
            +RL ++L  SY
Sbjct  189  SRLLDSLFYSY  199

78) Y11_p0741 in NC_017565


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  141 bits (520),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 88/191 (47%), Positives = 147/191 (77%), Gaps = 0/191 (0%)

Query  25   VMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVS  84
            ++ T+F+K+A+ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   Q+ ++ + + 
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  85   LTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSLFILLP  144
            L N E ++      + P + F+ ++ +++  + ++D+T+++WPK+ AD+   + L++ +P
Sbjct  69   LGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIP  128

Query  145  AFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfvllDGW  204
            AF +SEL  +FEIGFLIY+PFIVIDL++SN+LLA+GM MVSPMT+SLP+KLLLFV++ GW
Sbjct  129  AFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGW  188

Query  205  TRLTHGLVISY  215
            +RL ++L  SY
Sbjct  189  SRLLDSLFYSY  199

79) S58_72190 in NC_020453


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  141 bits (519),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 85/199 (43%), Positives = 141/199 (71%), Gaps = 0/199 (0%)

Query  16   LGLVTFAVVTMTSFVKIAVVLFLIRNALGVQQTPPNLVLYAIALVLTAYVSAPLVQAVYE  75
            ++L+ F ++  T+F+KIA+ L++ RNA+GVQQ PPN+ LY+IAL  T +V AP+ + + +
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  76   RVNDRATEFQTFADWKDAAERATQPVREHLSRFTTVAERDFFVTATGSLWPDSSRAKLSS  135
            RV+D++ E+      + +A    +P++  ++R T       ++  T  +WP     + S 
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  136  EDLVILVPSFMSSELKRAFEIGFLLYLPFIAIDLVVSAVLMSLGMSMVPPSTISVPFKLF  195
            +DL++ +P+F+ SEL+ +FEIGFL+Y+PFI IDL+VS +L++LGM MV+P T+S+P+KL+
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  196  LFVMVEGWSKLMHGLVLSY  214
            LFVMV GWS+L+++L  SY
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

80) sctR in NC_005126


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  141 bits (517),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 88/191 (47%), Positives = 146/191 (77%), Gaps = 0/191 (0%)

Query  25   VMATSFLKLAVVFSLLRNALGVQQIPPNMAMYGLAIILTIYVMAPVGFATQDYLRQNEVS  84
            ++ T+FLK+A+ + + RNA+GVQQ+PPNMA+YG+A+  T++VMAPV+   Q+ ++++ + 
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  85   FSNAQSVDKFVEEGLTPYRNFLKQHIKPSERTFFIDSTRQIWPSQYADRLEPDSLLILLP  144
            ++N++ ++      + P + F+ ++  P   + ++D+T+++WP + AD+   + LL+ +P
Sbjct  69   LGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIP  128

Query  145  AFTVSELTRAFEIGFLLYLPFIAIDLIISNILLAMGMMMVSPMTISlpfklllfvllDGW  204
            AF +SEL  +FEIGFL+Y+PFI IDLI+SN+LLA+GM MVSPMT+SLP+KLLLFV++ GW
Sbjct  129  AFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGW  188

Query  205  TRLTHGLVISY  215
            +RL ++L  SY
Sbjct  189  SRLLDSLFYSY  199

81) Dvul_2984 in NC_008741


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  140 bits (516),  Expect = 5e-35, Method: Compositional matrix adjust.
 Identities = 87/206 (43%), Positives = 148/206 (72%), Gaps = 13/206 (6%)

Query  16   LGLAPFFLMMVTSYVKIVVVTSLVRNALGVQQVPPTMVMNGLAIILSIFIMAPVASGTLD  75
            ++L PF+L++ T+++KI +   + RNA+GVQQVPP M + G+A+  ++F+MAPVA    +
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  76   LMQN--MKIGP----DPAPREIIALLDKASPPLRGFLERNADDKVVTVFMSTAKRIWPAD  129
             +++  + +G     ++++R +I        PL+ F+ RN+D  VV+ ++  ++R+WP +
Sbjct  61   RVHDHPLELGNTEKLQASARTVIE-------PLQRFMTRNTDPDVVAHLLDNTQRMWPKE  113

Query  130  QHASISRDNLLILIPSFTISELTRAFQIGFLLYLPFVAIDLVISNILLAMGMMMVSPMTI  189
                 S+++LL+ IP+F +SEL  +F+IGFL+Y+PF+ IDL++SN+LLA+GM MVSPMT+
Sbjct  114  MADQASKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTL  173

Query  190  SLPFKLLLFVTLDGWLKVSQGLLLSY  215
            SLP+KLLLFV + GW ++ ++L+ SY
Sbjct  174  SLPLKLLLFVMVSGWSRLLDSLFYSY  199

82) DVUA0122 in NC_005863


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  140 bits (516),  Expect = 5e-35, Method: Compositional matrix adjust.
 Identities = 87/206 (43%), Positives = 148/206 (72%), Gaps = 13/206 (6%)

Query  16   LGLAPFFLMMVTSYVKIVVVTSLVRNALGVQQVPPTMVMNGLAIILSIFIMAPVASGTLD  75
            ++L PF+L++ T+++KI +   + RNA+GVQQVPP M + G+A+  ++F+MAPVA    +
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  76   LMQN--MKIGP----DPAPREIIALLDKASPPLRGFLERNADDKVVTVFMSTAKRIWPAD  129
             +++  + +G     ++++R +I        PL+ F+ RN+D  VV+ ++  ++R+WP +
Sbjct  61   RVHDHPLELGNTEKLQASARTVIE-------PLQRFMTRNTDPDVVAHLLDNTQRMWPKE  113

Query  130  QHASISRDNLLILIPSFTISELTRAFQIGFLLYLPFVAIDLVISNILLAMGMMMVSPMTI  189
                 S+++LL+ IP+F +SEL  +F+IGFL+Y+PF+ IDL++SN+LLA+GM MVSPMT+
Sbjct  114  MADQASKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTL  173

Query  190  SLPFKLLLFVTLDGWLKVSQGLLLSY  215
            SLP+KLLLFV + GW ++ ++L+ SY
Sbjct  174  SLPLKLLLFVMVSGWSRLLDSLFYSY  199

83) Deval_3224 in NC_017311


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  140 bits (516),  Expect = 5e-35, Method: Compositional matrix adjust.
 Identities = 87/206 (43%), Positives = 148/206 (72%), Gaps = 13/206 (6%)

Query  16   LGLAPFFLMMVTSYVKIVVVTSLVRNALGVQQVPPTMVMNGLAIILSIFIMAPVASGTLD  75
            ++L PF+L++ T+++KI +   + RNA+GVQQVPP M + G+A+  ++F+MAPVA    +
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  76   LMQN--MKIGP----DPAPREIIALLDKASPPLRGFLERNADDKVVTVFMSTAKRIWPAD  129
             +++  + +G     ++++R +I        PL+ F+ RN+D  VV+ ++  ++R+WP +
Sbjct  61   RVHDHPLELGNTEKLQASARTVIE-------PLQRFMTRNTDPDVVAHLLDNTQRMWPKE  113

Query  130  QHASISRDNLLILIPSFTISELTRAFQIGFLLYLPFVAIDLVISNILLAMGMMMVSPMTI  189
                 S+++LL+ IP+F +SEL  +F+IGFL+Y+PF+ IDL++SN+LLA+GM MVSPMT+
Sbjct  114  MADQASKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTL  173

Query  190  SLPFKLLLFVTLDGWLKVSQGLLLSY  215
            SLP+KLLLFV + GW ++ ++L+ SY
Sbjct  174  SLPLKLLLFVMVSGWSRLLDSLFYSY  199

84) rhcR in NC_004463


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  140 bits (516),  Expect = 5e-35, Method: Compositional matrix adjust.
 Identities = 83/199 (42%), Positives = 143/199 (72%), Gaps = 0/199 (0%)

Query  18   LGLLAFAVVTTTAFIKVSVVLFLVRNALGTQSIPPNIVLYGAALILTVFISAPVFEQTYN  77
            ++L++F ++  TAF+K+++ L++ RNA+G Q +PPN+ LYG AL  T+F+ APV ++  +
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  78   RLTDPQLRYQSFDDWVMAAKEGQEPLRVHLKKFTNEEQRRFFLSSTEHVWSEEMRGSVTA  137
            R+ D  L   + +    +A+   EPL+  + + T+ +    +L +T+++W+ EM +  + 
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  138  DDFSILVPSFLISELKRGFEIGFLLYLPFITIDLIVTTILMAMGMSMVSPTVISVPFKLF  197
            +D+ + +P+F++SEL+ GFEIGFL+Y+PFI IDLIV+ +L+A+GM MVSP  +S+P+KL+
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  198  LFVTIDGWSRLMHGLVLSY  216
            LFV + GWSRL+++L  SY
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

85) rhcR in NC_017249


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  140 bits (516),  Expect = 5e-35, Method: Compositional matrix adjust.
 Identities = 83/199 (42%), Positives = 143/199 (72%), Gaps = 0/199 (0%)

Query  18   LGLLAFAVVTTTAFIKVSVVLFLVRNALGTQSIPPNIVLYGAALILTVFISAPVFEQTYN  77
            ++L++F ++  TAF+K+++ L++ RNA+G Q +PPN+ LYG AL  T+F+ APV ++  +
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  78   RLTDPQLRYQSFDDWVMAAKEGQEPLRVHLKKFTNEEQRRFFLSSTEHVWSEEMRGSVTA  137
            R+ D  L   + +    +A+   EPL+  + + T+ +    +L +T+++W+ EM +  + 
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  138  DDFSILVPSFLISELKRGFEIGFLLYLPFITIDLIVTTILMAMGMSMVSPTVISVPFKLF  197
            +D+ + +P+F++SEL+ GFEIGFL+Y+PFI IDLIV+ +L+A+GM MVSP  +S+P+KL+
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  198  LFVTIDGWSRLMHGLVLSY  216
            LFV + GWSRL+++L  SY
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

86) YE105_C0338 in NC_015224


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  140 bits (515),  Expect = 6e-35, Method: Compositional matrix adjust.
 Identities = 91/193 (48%), Positives = 139/193 (73%), Gaps = 0/193 (0%)

Query  24   MVMGTSFLKLSIVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVHARLQDEPL  83
            +++ T+FLK+++ + + RNA+GVQQVPPN+A+YG+AL  T+F+MAPV+ +++ R++D+PL
Sbjct  8    LIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPL  67

Query  84   PNDLGALLYHIDEHALEPYRDFLQRNTDAAQVHFFNDIVQTKWPVRYRDTIKPNSLLILM  143
              +    L       +EP + F+ RNTD+  V  + D  Q  WP    D    N LL+ +
Sbjct  68   ELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  144  PAFTLSQLTEAFKIGLLLYLPFVAIDLIVSNILLAMGMMMVSPITISLPFKLLIFILIDG  203
            PAF LS+L  +F IG+L+Y+PF+ IDLIVSN+LLA+GM MVSP+T+SLP+KLL+F+++ G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  204  WGLLLGQLVGSYL  216
            W+ LL+ L  SY+
Sbjct  188  WSRLLDSLFYSYM  200

87) A1122_03785 in NC_017168


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  140 bits (513),  Expect = 8e-35, Method: Compositional matrix adjust.
 Identities = 91/189 (49%), Positives = 137/189 (73%), Gaps = 0/189 (0%)

Query  48   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  107
            TAFLK+++ + + RNA+GVQQVPPN+A+YG+AL  T+F+MAPV+ ++Q R++++ L  + 
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  108  GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  167
                +   +  + P + F+ RNTD + V+ + D  Q  WP    D    + LL+ +PAF 
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  168  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  227
            LS+L+ +F IG+L+++PF+ IDLIVSN+LLA+GM MVSPMTLSLP+KLL+FV+V GWS +
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  228  LGQLVGSYL  236
            L+ L  SY+
Sbjct  192  LDSLFYSYM  200

88) epaP in NC_010159


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  140 bits (513),  Expect = 8e-35, Method: Compositional matrix adjust.
 Identities = 91/189 (49%), Positives = 137/189 (73%), Gaps = 0/189 (0%)

Query  28   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  87
            TAFLK+++ + + RNA+GVQQVPPN+A+YG+AL  T+F+MAPV+ ++Q R++++ L  + 
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  88   GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  147
                +   +  + P + F+ RNTD + V+ + D  Q  WP    D    + LL+ +PAF 
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  148  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  207
            LS+L+ +F IG+L+++PF+ IDLIVSN+LLA+GM MVSPMTLSLP+KLL+FV+V GWS +
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  208  LGQLVGSYL  216
            L+ L  SY+
Sbjct  192  LDSLFYSYM  200

89) YPA_4012 in NC_008150


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  140 bits (513),  Expect = 8e-35, Method: Compositional matrix adjust.
 Identities = 91/189 (49%), Positives = 137/189 (73%), Gaps = 0/189 (0%)

Query  48   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  107
            TAFLK+++ + + RNA+GVQQVPPN+A+YG+AL  T+F+MAPV+ ++Q R++++ L  + 
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  108  GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  167
                +   +  + P + F+ RNTD + V+ + D  Q  WP    D    + LL+ +PAF 
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  168  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  227
            LS+L+ +F IG+L+++PF+ IDLIVSN+LLA+GM MVSPMTLSLP+KLL+FV+V GWS +
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  228  LGQLVGSYL  236
            L+ L  SY+
Sbjct  192  LDSLFYSYM  200

90) fliP1 in NC_005810


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  140 bits (513),  Expect = 8e-35, Method: Compositional matrix adjust.
 Identities = 91/189 (49%), Positives = 137/189 (73%), Gaps = 0/189 (0%)

Query  48   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  107
            TAFLK+++ + + RNA+GVQQVPPN+A+YG+AL  T+F+MAPV+ ++Q R++++ L  + 
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  108  GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  167
                +   +  + P + F+ RNTD + V+ + D  Q  WP    D    + LL+ +PAF 
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  168  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  227
            LS+L+ +F IG+L+++PF+ IDLIVSN+LLA+GM MVSPMTLSLP+KLL+FV+V GWS +
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  228  LGQLVGSYL  236
            L+ L  SY+
Sbjct  192  LDSLFYSYM  200

91) YPO0270 in NC_003143


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  140 bits (513),  Expect = 8e-35, Method: Compositional matrix adjust.
 Identities = 91/189 (49%), Positives = 137/189 (73%), Gaps = 0/189 (0%)

Query  28   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  87
            TAFLK+++ + + RNA+GVQQVPPN+A+YG+AL  T+F+MAPV+ ++Q R++++ L  + 
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  88   GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  147
                +   +  + P + F+ RNTD + V+ + D  Q  WP    D    + LL+ +PAF 
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  148  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  207
            LS+L+ +F IG+L+++PF+ IDLIVSN+LLA+GM MVSPMTLSLP+KLL+FV+V GWS +
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  208  LGQLVGSYL  216
            L+ L  SY+
Sbjct  192  LDSLFYSYM  200

92) YPD4_0235 in NC_017154


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  140 bits (513),  Expect = 8e-35, Method: Compositional matrix adjust.
 Identities = 91/189 (49%), Positives = 137/189 (73%), Gaps = 0/189 (0%)

Query  28   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  87
            TAFLK+++ + + RNA+GVQQVPPN+A+YG+AL  T+F+MAPV+ ++Q R++++ L  + 
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  88   GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  147
                +   +  + P + F+ RNTD + V+ + D  Q  WP    D    + LL+ +PAF 
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  148  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  207
            LS+L+ +F IG+L+++PF+ IDLIVSN+LLA+GM MVSPMTLSLP+KLL+FV+V GWS +
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  208  LGQLVGSYL  216
            L+ L  SY+
Sbjct  192  LDSLFYSYM  200

93) YPD8_0240 in NC_017160


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  140 bits (513),  Expect = 8e-35, Method: Compositional matrix adjust.
 Identities = 91/189 (49%), Positives = 137/189 (73%), Gaps = 0/189 (0%)

Query  28   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  87
            TAFLK+++ + + RNA+GVQQVPPN+A+YG+AL  T+F+MAPV+ ++Q R++++ L  + 
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  88   GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  147
                +   +  + P + F+ RNTD + V+ + D  Q  WP    D    + LL+ +PAF 
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  148  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  207
            LS+L+ +F IG+L+++PF+ IDLIVSN+LLA+GM MVSPMTLSLP+KLL+FV+V GWS +
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  208  LGQLVGSYL  216
            L+ L  SY+
Sbjct  192  LDSLFYSYM  200

94) y0530 in NC_004088


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  140 bits (513),  Expect = 8e-35, Method: Compositional matrix adjust.
 Identities = 91/189 (49%), Positives = 137/189 (73%), Gaps = 0/189 (0%)

Query  48   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  107
            TAFLK+++ + + RNA+GVQQVPPN+A+YG+AL  T+F+MAPV+ ++Q R++++ L  + 
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  108  GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  167
                +   +  + P + F+ RNTD + V+ + D  Q  WP    D    + LL+ +PAF 
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  168  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  227
            LS+L+ +F IG+L+++PF+ IDLIVSN+LLA+GM MVSPMTLSLP+KLL+FV+V GWS +
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  228  LGQLVGSYL  236
            L+ L  SY+
Sbjct  192  LDSLFYSYM  200

95) YPN_3397 in NC_008149


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  140 bits (513),  Expect = 8e-35, Method: Compositional matrix adjust.
 Identities = 91/189 (49%), Positives = 137/189 (73%), Gaps = 0/189 (0%)

Query  48   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  107
            TAFLK+++ + + RNA+GVQQVPPN+A+YG+AL  T+F+MAPV+ ++Q R++++ L  + 
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  108  GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  167
                +   +  + P + F+ RNTD + V+ + D  Q  WP    D    + LL+ +PAF 
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  168  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  227
            LS+L+ +F IG+L+++PF+ IDLIVSN+LLA+GM MVSPMTLSLP+KLL+FV+V GWS +
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  228  LGQLVGSYL  236
            L+ L  SY+
Sbjct  192  LDSLFYSYM  200

96) YPDSF_3700 in NC_009381


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  140 bits (513),  Expect = 8e-35, Method: Compositional matrix adjust.
 Identities = 91/189 (49%), Positives = 137/189 (73%), Gaps = 0/189 (0%)

Query  48   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  107
            TAFLK+++ + + RNA+GVQQVPPN+A+YG+AL  T+F+MAPV+ ++Q R++++ L  + 
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  108  GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  167
                +   +  + P + F+ RNTD + V+ + D  Q  WP    D    + LL+ +PAF 
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  168  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  227
            LS+L+ +F IG+L+++PF+ IDLIVSN+LLA+GM MVSPMTLSLP+KLL+FV+V GWS +
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  228  LGQLVGSYL  236
            L+ L  SY+
Sbjct  192  LDSLFYSYM  200

97) YPZ3_0233 in NC_014029


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  140 bits (513),  Expect = 8e-35, Method: Compositional matrix adjust.
 Identities = 91/189 (49%), Positives = 137/189 (73%), Gaps = 0/189 (0%)

Query  28   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  87
            TAFLK+++ + + RNA+GVQQVPPN+A+YG+AL  T+F+MAPV+ ++Q R++++ L  + 
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  88   GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  147
                +   +  + P + F+ RNTD + V+ + D  Q  WP    D    + LL+ +PAF 
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  148  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  207
            LS+L+ +F IG+L+++PF+ IDLIVSN+LLA+GM MVSPMTLSLP+KLL+FV+V GWS +
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  208  LGQLVGSYL  216
            L+ L  SY+
Sbjct  192  LDSLFYSYM  200

98) epaP in NC_009708


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  140 bits (513),  Expect = 8e-35, Method: Compositional matrix adjust.
 Identities = 91/189 (49%), Positives = 137/189 (73%), Gaps = 0/189 (0%)

Query  28   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  87
            TAFLK+++ + + RNA+GVQQVPPN+A+YG+AL  T+F+MAPV+ ++Q R++++ L  + 
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  88   GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  147
                +   +  + P + F+ RNTD + V+ + D  Q  WP    D    + LL+ +PAF 
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  148  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  207
            LS+L+ +F IG+L+++PF+ IDLIVSN+LLA+GM MVSPMTLSLP+KLL+FV+V GWS +
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  208  LGQLVGSYL  216
            L+ L  SY+
Sbjct  192  LDSLFYSYM  200

99) YPTB0327 in NC_006155


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  140 bits (513),  Expect = 8e-35, Method: Compositional matrix adjust.
 Identities = 91/189 (49%), Positives = 137/189 (73%), Gaps = 0/189 (0%)

Query  48   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  107
            TAFLK+++ + + RNA+GVQQVPPN+A+YG+AL  T+F+MAPV+ ++Q R++++ L  + 
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  108  GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  167
                +   +  + P + F+ RNTD + V+ + D  Q  WP    D    + LL+ +PAF 
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  168  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  227
            LS+L+ +F IG+L+++PF+ IDLIVSN+LLA+GM MVSPMTLSLP+KLL+FV+V GWS +
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  228  LGQLVGSYL  236
            L+ L  SY+
Sbjct  192  LDSLFYSYM  200

100) YPTS_0351 in NC_010634


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  140 bits (513),  Expect = 8e-35, Method: Compositional matrix adjust.
 Identities = 91/189 (49%), Positives = 137/189 (73%), Gaps = 0/189 (0%)

Query  48   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  107
            TAFLK+++ + + RNA+GVQQVPPN+A+YG+AL  T+F+MAPV+ ++Q R++++ L  + 
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  108  GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  167
                +   +  + P + F+ RNTD + V+ + D  Q  WP    D    + LL+ +PAF 
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  168  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  227
            LS+L+ +F IG+L+++PF+ IDLIVSN+LLA+GM MVSPMTLSLP+KLL+FV+V GWS +
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  228  LGQLVGSYL  236
            L+ L  SY+
Sbjct  192  LDSLFYSYM  200

101) YPK_3902 in NC_010465


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  140 bits (513),  Expect = 8e-35, Method: Compositional matrix adjust.
 Identities = 91/189 (49%), Positives = 137/189 (73%), Gaps = 0/189 (0%)

Query  48   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  107
            TAFLK+++ + + RNA+GVQQVPPN+A+YG+AL  T+F+MAPV+ ++Q R++++ L  + 
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  108  GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  167
                +   +  + P + F+ RNTD + V+ + D  Q  WP    D    + LL+ +PAF 
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  168  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  227
            LS+L+ +F IG+L+++PF+ IDLIVSN+LLA+GM MVSPMTLSLP+KLL+FV+V GWS +
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  228  LGQLVGSYL  236
            L+ L  SY+
Sbjct  192  LDSLFYSYM  200

102) pscR in NC_011770


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  139 bits (511),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 85/190 (45%), Positives = 144/190 (76%), Gaps = 0/190 (0%)

Query  26   MATSFIKMTVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATRDYLRNHDVSL  85
            + T+F+K+++ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   ++ +++H + L
Sbjct  10   VCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLEL  69

Query  86   SDSASVERFLDEGMAPYRNFLKRQIQEREHTFFMESTRQVWPSEYAERLDPDSLLILLPA  145
            +++  ++      + P + F+ R+ +    + ++++T+++WP E A++   + LL+ +PA
Sbjct  70   GNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPA  129

Query  146  FTVSELTRAFEIGFLIYLPFIAIDLIISNILLAMGMMMVSPMTISlpfklllfvllDGWA  205
            F +SEL  +FEIGFLIY+PFI IDLI+SN+LLA+GM MVSPMT+SLP+KLLLFV++ GW+
Sbjct  130  FVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWS  189

Query  206  RLTHGLVISY  215
            RL ++L  SY
Sbjct  190  RLLDSLFYSY  199

103) bglu_2g02340 in NC_012721


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  139 bits (512),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 84/199 (43%), Positives = 145/199 (73%), Gaps = 0/199 (0%)

Query  17   ISLLPFVAMVVTSYAKVVVVLGLLRNALGVQQVPPNMVLNGIAILVSLYVMAPIGMQASK  76
            +SL+PF+ +V T++ K+ + L + RNA+GVQQVPPNM L GIA+  +++VMAP++ +  +
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  77   SLEGQQLASQPSQALIQAFGAAREPFRAFLEKHTQEREKRFFLRSAAVVWPKEQAQQLSE  136
             ++++ L    ++ L  +  +  EP++ F+ ++T+      +L ++  +WPKE A+Q S 
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  137  HDLIVLAPSFTLSELTDAFKIGFLLYIAFIVVDLIIANVLLALGLNQVTPTNVAIPFKLL  196
            +DL++  P+F LSEL  +F IGFL+YI+FIV+DLI++N+LLALG++ V+P  +++P+KLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  197  LFVVMDGWSTLIHGLVMTY  215
            LFV++ GWS L+++L  +Y
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

104) bgla_2g02730 in NC_015376


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  139 bits (510),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 86/199 (44%), Positives = 144/199 (73%), Gaps = 0/199 (0%)

Query  17   ISLLPFVAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGIAILVSIYVMAPIGMQASK  76
            +SL+PF+ +V T++ KI + L + RNA+GVQQVPPNM L GIA+  +++VMAP++ +  +
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  77   ALEGQQLASQPSQALIQAFGAAKEPFRAFLVKHTAEREKRFFLRSAAVVWPKEQAQQLSE  136
             ++++ L    ++ L  +  +  EP++ F+ ++T       +L ++  +WPKE A+Q S 
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  137  NDLIVLAPSFTLSELTDAFKIGFLLYIAFIVVDLIIANVLLALGLNQVTPTNVAIPFKLL  196
            NDL++  P+F LSEL  +F IGFL+YI+FIV+DLI++N+LLALG++ V+P  +++P+KLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  197  LFVVMDGWSTLIHGLVMTY  215
            LFV++ GWS L+++L  +Y
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

105) sctR in NC_012962


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  138 bits (507),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 86/191 (46%), Positives = 146/191 (77%), Gaps = 0/191 (0%)

Query  25   VMATSFLKLAVVFSLLRNALGVQQIPPNMAMYGLAIILTIYVMAPVGFATQDYLRQNEVS  84
            ++ T+FLK+A+ + + RNA+GVQQ+PPNMA+YG+A+  T++VMAPV+   Q+ ++++ + 
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  85   FSNAQSVEKFLEEGMAPYRNFLKQHIKSSERTFFIDSTRQIWPSQYANRLEPDSLLILLP  144
            ++N++ ++      + P + F+ ++  +   + ++D+T+++WP + A++   + LL+ +P
Sbjct  69   LGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIP  128

Query  145  AFTVSELTRAFEIGFLLYLPFIAIDLIISNILLAMGMMMVSPMTISlpfklllfvllDGW  204
            AF +SEL  +FEIGFL+Y+PFI IDLI+SN+LLA+GM MVSPMT+SLP+KLLLFV++ GW
Sbjct  129  AFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGW  188

Query  205  TRLTHGLVISY  215
            +RL ++L  SY
Sbjct  189  SRLLDSLFYSY  199

106) ECs4583 in NC_002695


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  138 bits (508),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 79/188 (43%), Positives = 142/188 (76%), Gaps = 6/188 (3%)

Query  30   IGTSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINY  89
            + T+FLKI++ L I +NA+G+QQVPPNMAL +++L  TMF+M+P+  ++++ + ++P++ 
Sbjct  10   VCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLEL  69

Query  90   TDSDFFQKVDEKILSPYRGFLEKNTEKDNVEFF----ERAAQKKLGNETILKKDSLFILL  145
             +++ +Q     ++ P + F+ +NT+ D V  +    +R   K +++++   K+ L++ +
Sbjct  70   GNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA--SKNDLLLAI  127

Query  146  PAFTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGG  205
            PAF +++L+A+F IGFL+Y+PFI IDLI+SN+LLALGM MVSP+T+S+P+K+LLF++V+G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  206  WQKLFEFL  213
            W +L++ L
Sbjct  188  WSRLLDSL  195

107) escR in NC_013364


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  138 bits (506),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 79/186 (43%), Positives = 141/186 (76%), Gaps = 6/186 (3%)

Query  32   TSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYTD  91
            T+FLKI++ L I +NA+G+QQVPPNMAL +++L  TMF+M+P+  ++++ + ++P++  +
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  92   SDFFQKVDEKILSPYRGFLEKNTEKDNVEFF----ERAAQKKLGNETILKKDSLFILLPA  147
            ++ +Q     ++ P + F+ +NT+ D V  +    +R   K +++++   K+ L++ +PA
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA--SKNDLLLAIPA  129

Query  148  FTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGGWQ  207
            F +++L+A+F IGFL+Y+PFI IDLI+SN+LLALGM MVSP+T+S+P+K+LLF++V+GW 
Sbjct  130  FVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWS  189

Query  208  KLFEFL  213
            +L++ L
Sbjct  190  RLLDSL  195

108) escR in NC_011601


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  138 bits (506),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 79/186 (43%), Positives = 141/186 (76%), Gaps = 6/186 (3%)

Query  32   TSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYTD  91
            T+FLKI++ L I +NA+G+QQVPPNMAL +++L  TMF+M+P+  ++++ + ++P++  +
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  92   SDFFQKVDEKILSPYRGFLEKNTEKDNVEFF----ERAAQKKLGNETILKKDSLFILLPA  147
            ++ +Q     ++ P + F+ +NT+ D V  +    +R   K +++++   K+ L++ +PA
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA--SKNDLLLAIPA  129

Query  148  FTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGGWQ  207
            F +++L+A+F IGFL+Y+PFI IDLI+SN+LLALGM MVSP+T+S+P+K+LLF++V+GW 
Sbjct  130  FVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWS  189

Query  208  KLFEFL  213
            +L++ L
Sbjct  190  RLLDSL  195

109) epaP in NC_011353


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  138 bits (506),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 79/186 (43%), Positives = 141/186 (76%), Gaps = 6/186 (3%)

Query  32   TSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYTD  91
            T+FLKI++ L I +NA+G+QQVPPNMAL +++L  TMF+M+P+  ++++ + ++P++  +
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  92   SDFFQKVDEKILSPYRGFLEKNTEKDNVEFF----ERAAQKKLGNETILKKDSLFILLPA  147
            ++ +Q     ++ P + F+ +NT+ D V  +    +R   K +++++   K+ L++ +PA
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA--SKNDLLLAIPA  129

Query  148  FTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGGWQ  207
            F +++L+A+F IGFL+Y+PFI IDLI+SN+LLALGM MVSP+T+S+P+K+LLF++V+GW 
Sbjct  130  FVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWS  189

Query  208  KLFEFL  213
            +L++ L
Sbjct  190  RLLDSL  195

110) escR in NC_002655


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  138 bits (506),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 79/186 (43%), Positives = 141/186 (76%), Gaps = 6/186 (3%)

Query  32   TSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYTD  91
            T+FLKI++ L I +NA+G+QQVPPNMAL +++L  TMF+M+P+  ++++ + ++P++  +
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  92   SDFFQKVDEKILSPYRGFLEKNTEKDNVEFF----ERAAQKKLGNETILKKDSLFILLPA  147
            ++ +Q     ++ P + F+ +NT+ D V  +    +R   K +++++   K+ L++ +PA
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA--SKNDLLLAIPA  129

Query  148  FTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGGWQ  207
            F +++L+A+F IGFL+Y+PFI IDLI+SN+LLALGM MVSP+T+S+P+K+LLF++V+GW 
Sbjct  130  FVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWS  189

Query  208  KLFEFL  213
            +L++ L
Sbjct  190  RLLDSL  195

111) escR in NC_013008


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  138 bits (506),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 79/186 (43%), Positives = 141/186 (76%), Gaps = 6/186 (3%)

Query  32   TSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYTD  91
            T+FLKI++ L I +NA+G+QQVPPNMAL +++L  TMF+M+P+  ++++ + ++P++  +
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  92   SDFFQKVDEKILSPYRGFLEKNTEKDNVEFF----ERAAQKKLGNETILKKDSLFILLPA  147
            ++ +Q     ++ P + F+ +NT+ D V  +    +R   K +++++   K+ L++ +PA
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA--SKNDLLLAIPA  129

Query  148  FTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGGWQ  207
            F +++L+A+F IGFL+Y+PFI IDLI+SN+LLALGM MVSP+T+S+P+K+LLF++V+GW 
Sbjct  130  FVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWS  189

Query  208  KLFEFL  213
            +L++ L
Sbjct  190  RLLDSL  195

112) escR in NC_013941


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  138 bits (506),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 79/186 (43%), Positives = 141/186 (76%), Gaps = 6/186 (3%)

Query  32   TSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYTD  91
            T+FLKI++ L I +NA+G+QQVPPNMAL +++L  TMF+M+P+  ++++ + ++P++  +
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  92   SDFFQKVDEKILSPYRGFLEKNTEKDNVEFF----ERAAQKKLGNETILKKDSLFILLPA  147
            ++ +Q     ++ P + F+ +NT+ D V  +    +R   K +++++   K+ L++ +PA
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA--SKNDLLLAIPA  129

Query  148  FTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGGWQ  207
            F +++L+A+F IGFL+Y+PFI IDLI+SN+LLALGM MVSP+T+S+P+K+LLF++V+GW 
Sbjct  130  FVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWS  189

Query  208  KLFEFL  213
            +L++ L
Sbjct  190  RLLDSL  195

113) ECO55CA74_21290 in NC_017656


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  138 bits (506),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 79/186 (43%), Positives = 141/186 (76%), Gaps = 6/186 (3%)

Query  32   TSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYTD  91
            T+FLKI++ L I +NA+G+QQVPPNMAL +++L  TMF+M+P+  ++++ + ++P++  +
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  92   SDFFQKVDEKILSPYRGFLEKNTEKDNVEFF----ERAAQKKLGNETILKKDSLFILLPA  147
            ++ +Q     ++ P + F+ +NT+ D V  +    +R   K +++++   K+ L++ +PA
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA--SKNDLLLAIPA  129

Query  148  FTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGGWQ  207
            F +++L+A+F IGFL+Y+PFI IDLI+SN+LLALGM MVSP+T+S+P+K+LLF++V+GW 
Sbjct  130  FVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWS  189

Query  208  KLFEFL  213
            +L++ L
Sbjct  190  RLLDSL  195

114) CDCO157_4318 in NC_017906


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  138 bits (506),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 79/186 (43%), Positives = 141/186 (76%), Gaps = 6/186 (3%)

Query  32   TSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYTD  91
            T+FLKI++ L I +NA+G+QQVPPNMAL +++L  TMF+M+P+  ++++ + ++P++  +
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  92   SDFFQKVDEKILSPYRGFLEKNTEKDNVEFF----ERAAQKKLGNETILKKDSLFILLPA  147
            ++ +Q     ++ P + F+ +NT+ D V  +    +R   K +++++   K+ L++ +PA
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA--SKNDLLLAIPA  129

Query  148  FTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGGWQ  207
            F +++L+A+F IGFL+Y+PFI IDLI+SN+LLALGM MVSP+T+S+P+K+LLF++V+GW 
Sbjct  130  FVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWS  189

Query  208  KLFEFL  213
            +L++ L
Sbjct  190  RLLDSL  195

115) escR in NC_013353


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  137 bits (505),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 78/186 (42%), Positives = 141/186 (76%), Gaps = 6/186 (3%)

Query  32   TSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYTD  91
            T+FLKI++ L I +NA+G+QQVPPNMAL +++L  TMF+M+P+  ++++ + ++P++  +
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  92   SDFFQKVDEKILSPYRGFLEKNTEKENVEFF----ERAAQKKLGNETILKKDSLFILLPA  147
            ++ +Q     ++ P + F+ +NT+ + V  +    +R   K +++++   K+ L++ +PA
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA--SKNDLLLAIPA  129

Query  148  FTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGGWQ  207
            F +++L+A+F IGFL+Y+PFI IDLI+SN+LLALGM MVSP+T+S+P+K+LLF++V+GW 
Sbjct  130  FVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWS  189

Query  208  KLFEFL  213
            +L++ L
Sbjct  190  RLLDSL  195

116) escR in NC_013361


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  137 bits (505),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 78/186 (42%), Positives = 141/186 (76%), Gaps = 6/186 (3%)

Query  32   TSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYTD  91
            T+FLKI++ L I +NA+G+QQVPPNMAL +++L  TMF+M+P+  ++++ + ++P++  +
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  92   SDFFQKVDEKILSPYRGFLEKNTEKENVEFF----ERAAQKKLGNETILKKDSLFILLPA  147
            ++ +Q     ++ P + F+ +NT+ + V  +    +R   K +++++   K+ L++ +PA
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA--SKNDLLLAIPA  129

Query  148  FTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGGWQ  207
            F +++L+A+F IGFL+Y+PFI IDLI+SN+LLALGM MVSP+T+S+P+K+LLF++V+GW 
Sbjct  130  FVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWS  189

Query  208  KLFEFL  213
            +L++ L
Sbjct  190  RLLDSL  195

117) sctR in NC_020127


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  137 bits (503),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 86/200 (43%), Positives = 138/200 (69%), Gaps = 9/200 (4%)

Query  20   PFVIMMVTSYVKIVVVTSLIRNALGVQQVPPAIVMNGLAIILSIFIMAPVYMKMEDLYLK  79
            PF++++ T+++KI +   + RNA+GVQQVPP + + G+A+  ++F+MAPV   M++    
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ----  60

Query  80   TALPSSPAALEVIKALYDATP----PLREFLIRNADESTIRGLMVTAKRIWPKDQHETIS  135
              +   P  L     L  ++     PL+ F+ RN+D   +  L+  ++R+WPK+  +  S
Sbjct  61   -RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQAS  119

Query  136  RNNLLIIIPAFTITELTKSFQIGFLLYLPFVAIDLVVSNILLAMGMMMVSPMTISLPFKL  195
            +N+LL+ IPAF ++EL  +F+IGFL+Y+PF+ IDL+VSN+LLA+GM MVSPMT+SLP+KL
Sbjct  120  KNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKL  179

Query  196  LLFVTLDGWLKISQGLMLSY  215
            LLFV + GW ++ ++L  SY
Sbjct  180  LLFVMVSGWSRLLDSLFYSY  199

118) SctR in NC_008011


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  137 bits (503),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 86/200 (43%), Positives = 138/200 (69%), Gaps = 9/200 (4%)

Query  20   PFVIMMVTSYVKIVVVTSLIRNALGVQQVPPAIVMNGLAIILSIFIMAPVYMKMEDLYLK  79
            PF++++ T+++KI +   + RNA+GVQQVPP + + G+A+  ++F+MAPV   M++    
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ----  60

Query  80   TALPSSPAALEVIKALYDATP----PLREFLIRNADESTIRGLMVTAKRIWPKDQHETIS  135
              +   P  L     L  ++     PL+ F+ RN+D   +  L+  ++R+WPK+  +  S
Sbjct  61   -RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQAS  119

Query  136  RNNLLIIIPAFTITELTKSFQIGFLLYLPFVAIDLVVSNILLAMGMMMVSPMTISLPFKL  195
            +N+LL+ IPAF ++EL  +F+IGFL+Y+PF+ IDL+VSN+LLA+GM MVSPMT+SLP+KL
Sbjct  120  KNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKL  179

Query  196  LLFVTLDGWLKISQGLMLSY  215
            LLFV + GW ++ ++L  SY
Sbjct  180  LLFVMVSGWSRLLDSLFYSY  199

119) PSPPH_2535 in NC_005773


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  137 bits (502),  Expect = 7e-34, Method: Compositional matrix adjust.
 Identities = 87/199 (44%), Positives = 149/199 (75%), Gaps = 0/199 (0%)

Query  18   IGLIPLAVVTLTGFMKISVVLFLIRNALGVQQTPPNLVLYGIALILSVYVTTPLIGDMYR  77
            ++LIP+ ++  T+F+KI++ L++ RNA+GVQQ PPN+ LYGIAL  +++V +P+  +M +
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  78   EVQGRDLSLQNVQQLEELGSALCPTLQAHLSKFANESERGFFVQATETIWSPEaradlrd  137
             V+++ L L N ++L+  + ++   LQ  +++ ++    + +++ T+ +W+ E   +   
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  138  ddlvvlIPAFVSSELTRAFEIGFLLYIPFLVVDLLVSNVLMAMGMSMVSPTLISIPLKIF  197
            +DL++ IPAFV SEL  +FEIGFL+YIPF+V+DL+VSN+L+A+GM MVSP  +S+PLK++
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  198  LFVALSGWSRLMHGLILSY  216
            LFV +SGWSRL+++L+ SY
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

120) C770_GR4pB210 in NC_019847


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  136 bits (498),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 82/199 (42%), Positives = 137/199 (69%), Gaps = 0/199 (0%)

Query  17   ISVLPVIAVVATSFTRISVVLLIVRNAIGIQQTPPNLLVFAIAIVLSAFVMNPVLQSSWQ  76
            +S++P + +V T+F +I++ LLI RNAIG+QQ PPN+ +++IA+  + FVM PV +   Q
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  77   LLILHGADFSTVGGMADGMVKVGAPLKEFMTKFSDEEVRGFFVEASQKIWVDAPTIPIAS  136
             +  H  +++    +  +   V  PL+ FMT+ +D +V + +++ +Q++W    +   + 
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  137  DDVTILTPSFLVSELTRAFEAGFLIYLPFLMIDFAVSAILVALGMQMMSPTVVSTPIKLL  196
            +D+ +  P+F++SEL  +FE GFLIY+PF++ID+ VS +L+ALGMQM+SP  +S P+KLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  197  LFVSIDGWRRLLEGLVLSY  215
            LFV + GW RLL++L  SY
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

121) F504_4358 in NC_021745


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  136 bits (501),  Expect = 7e-34, Method: Compositional matrix adjust.
 Identities = 87/201 (44%), Positives = 142/201 (71%), Gaps = 2/201 (0%)

Query  16   IALLPFAAMVVTSYTKIVVVLGLLRNALGVQQVPPNMVLNGIAMIVSCFVMAPVGMEAMQ  75
            ++L+PF  +V T++ KI + L + RNA+GVQQVPPNM L GIA+  + FVMAPV+ E  Q
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  76   RAHVQINAQGGTNITQVMPLLDAARDPFREFLNKHTNAREKAFFMRSAQQLWPPAKAAQL  135
            R H +    G T+  Q  +   +  +P++ F+ ++T++   A ++ ++Q++WP   A Q 
Sbjct  61   RVHDHPLELGNTEKLQASA--RTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA  118

Query  136  KDDDLIVLAPAFTLTELTSAFRIGFLLYLAFIVIDLVIANLLMALGLSQVTPSNVAIPFK  195
              +DL++  PAF L+EL ++F IGFL+Y++FIVIDL+++NLL+ALG+  V+P  +++P+K
Sbjct  119  SKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLK  178

Query  196  LLLFVVMDGWSVLIHGLVNTY  216
            LLLFV++ GWS L+++L  +Y
Sbjct  179  LLLFVMVSGWSRLLDSLFYSY  199

122) hrcR in NC_003296


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  136 bits (501),  Expect = 7e-34, Method: Compositional matrix adjust.
 Identities = 87/201 (44%), Positives = 142/201 (71%), Gaps = 2/201 (0%)

Query  16   IALLPFAAMVVTSYTKIVVVLGLLRNALGVQQVPPNMVLNGIAMIVSCFVMAPVGMEAMQ  75
            ++L+PF  +V T++ KI + L + RNA+GVQQVPPNM L GIA+  + FVMAPV+ E  Q
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  76   RAHVQINAQGGTNITQVMPLLDAARDPFREFLNKHTNAREKAFFMRSAQQLWPPAKAAQL  135
            R H +    G T+  Q  +   +  +P++ F+ ++T++   A ++ ++Q++WP   A Q 
Sbjct  61   RVHDHPLELGNTEKLQASA--RTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA  118

Query  136  KDDDLIVLAPAFTLTELTSAFRIGFLLYLAFIVIDLVIANLLMALGLSQVTPSNVAIPFK  195
              +DL++  PAF L+EL ++F IGFL+Y++FIVIDL+++NLL+ALG+  V+P  +++P+K
Sbjct  119  SKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLK  178

Query  196  LLLFVVMDGWSVLIHGLVNTY  216
            LLLFV++ GWS L+++L  +Y
Sbjct  179  LLLFVMVSGWSRLLDSLFYSY  199

123) M892_04535 in NC_022269


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  136 bits (500),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 90/195 (47%), Positives = 144/195 (74%), Gaps = 0/195 (0%)

Query  21   PFIAMMATSFVKLAVVFSLLRNALGVQQIPPNMALYGLAIILSIFIMAPVGFETYDYVTQ  80
            PF+ ++ T+F+K+A+ + + RNA+GVQQ+PPNMALYG+A+  ++F+MAPV+ E  + V +
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  81   HEISLEDSESIEGLIESGLQPYREFLKKHIRETESVFFTDAARTLWPQKYVDRLESDSll  140
            H + L ++E +++   + ++P + F+ ++        + D ++ +WP+   D+   + LL
Sbjct  65   HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLL  124

Query  141  lllPAFTVSELTRAFEIGFLLYLPFIAIDLIVSNILLAMGMMMVSPMTISlpfklllfvl  200
            L +PAF +SEL  +FEIGFL+Y+PFI IDLIVSN+LLA+GM MVSPMT+SLP+KLLLFV+
Sbjct  125  LAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVM  184

Query  201  lDGWTKLTHGLVLSY  215
            + GW++L ++L  SY
Sbjct  185  VSGWSRLLDSLFYSY  199

124) VIBHAR_01726 in NC_009783


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  136 bits (500),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 90/195 (47%), Positives = 144/195 (74%), Gaps = 0/195 (0%)

Query  21   PFIAMMATSFVKLAVVFSLLRNALGVQQIPPNMALYGLAIILSIFIMAPVGFETYDYVTQ  80
            PF+ ++ T+F+K+A+ + + RNA+GVQQ+PPNMALYG+A+  ++F+MAPV+ E  + V +
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  81   HEISLEDSESIEGLIESGLQPYREFLKKHIRETESVFFTDAARTLWPQKYVDRLESDSll  140
            H + L ++E +++   + ++P + F+ ++        + D ++ +WP+   D+   + LL
Sbjct  65   HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLL  124

Query  141  lllPAFTVSELTRAFEIGFLLYLPFIAIDLIVSNILLAMGMMMVSPMTISlpfklllfvl  200
            L +PAF +SEL  +FEIGFL+Y+PFI IDLIVSN+LLA+GM MVSPMT+SLP+KLLLFV+
Sbjct  125  LAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVM  184

Query  201  lDGWTKLTHGLVLSY  215
            + GW++L ++L  SY
Sbjct  185  VSGWSRLLDSLFYSY  199

125) spaP in NC_017731


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  136 bits (500),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 78/189 (42%), Positives = 141/189 (75%), Gaps = 2/189 (1%)

Query  9    TLLPFIIAAGTCYLKISIVLIMVRNAMGVQQVPSTMALNGIAMLLSLFVMMPVVQDISHY  68
            +L+PF++   T +LKI++ L++ RNA+GVQQVP+ MAL GIA+  ++FVM PV +++ + 
Sbjct  2    SLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQR  61

Query  69   MREEKVDFGNVESVDNFVDGGLGRYKAYLQKYSDPELV-QFFESVQQQRNEEPMDAEAHS  127
            ++++ +++GN E ++      +   + ++ + +DP++V +++++ Q+ +  E M  +A  
Sbjct  62   VHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKE-MADQASK  120

Query  128  ATLFSLLPAYALSEVKSAFEIGFYIYLPFVVIDLVISSILLALGMMMMSPVTISVPVKLI  187
              L+  +PA+ LSE++++FEIGF IY+PF+VIDL++S++LLALGM M+SP+T+S+P+KL+
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  188  LFVAIDGWS  196
            LFV + GWS
Sbjct  181  LFVMVSGWS  189

126) N646_0740 in NC_022349


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  135 bits (497),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 89/195 (46%), Positives = 143/195 (74%), Gaps = 0/195 (0%)

Query  21   PFIAMMATSFVKLAVVFSLLRNALGVQQIPPNMALYGLAIILSIFIMAPVGFETYDYVKQ  80
            PF+ ++ T+F+K+A+ + + RNA+GVQQ+PPNMALYG+A+  ++F+MAPV+ E  + V +
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  81   HDISLEDSASVEGLIESGLQPYREFLKKHIRETEAIFFTDAARTLWPQKYVDRLESDSll  140
            H + L ++  +++   + ++P + F+ ++        + D ++ +WP+   D+   + LL
Sbjct  65   HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLL  124

Query  141  lllPAFTVSELTRAFEIGFLLYLPFIAIDLIVSNILLAMGMMMVSPMTISlpfklllfvl  200
            L +PAF +SEL  +FEIGFL+Y+PFI IDLIVSN+LLA+GM MVSPMT+SLP+KLLLFV+
Sbjct  125  LAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVM  184

Query  201  lDGWTKLTHGLVLSY  215
            + GW++L ++L  SY
Sbjct  185  VSGWSRLLDSLFYSY  199

127) VEA_003362 in NC_013456


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  135 bits (497),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 89/195 (46%), Positives = 143/195 (74%), Gaps = 0/195 (0%)

Query  21   PFIAMMATSFVKLAVVFSLLRNALGVQQIPPNMALYGLAIILSIFIMAPVGFETYDYVKQ  80
            PF+ ++ T+F+K+A+ + + RNA+GVQQ+PPNMALYG+A+  ++F+MAPV+ E  + V +
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  81   HDISLEDSASVEGLIESGLQPYREFLKKHIRETEAIFFTDAARTLWPQKYVDRLESDSll  140
            H + L ++  +++   + ++P + F+ ++        + D ++ +WP+   D+   + LL
Sbjct  65   HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLL  124

Query  141  lllPAFTVSELTRAFEIGFLLYLPFIAIDLIVSNILLAMGMMMVSPMTISlpfklllfvl  200
            L +PAF +SEL  +FEIGFL+Y+PFI IDLIVSN+LLA+GM MVSPMT+SLP+KLLLFV+
Sbjct  125  LAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVM  184

Query  201  lDGWTKLTHGLVLSY  215
            + GW++L ++L  SY
Sbjct  185  VSGWSRLLDSLFYSY  199

128) VPBB_1532 in NC_019955


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  135 bits (497),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 89/195 (46%), Positives = 143/195 (74%), Gaps = 0/195 (0%)

Query  21   PFIAMMATSFVKLAVVFSLLRNALGVQQIPPNMALYGLAIILSIFIMAPVGFETYDYVKQ  80
            PF+ ++ T+F+K+A+ + + RNA+GVQQ+PPNMALYG+A+  ++F+MAPV+ E  + V +
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  81   HDISLEDSASVEGLIESGLQPYREFLKKHIRETEAIFFTDAARTLWPQKYVDRLESDSll  140
            H + L ++  +++   + ++P + F+ ++        + D ++ +WP+   D+   + LL
Sbjct  65   HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLL  124

Query  141  lllPAFTVSELTRAFEIGFLLYLPFIAIDLIVSNILLAMGMMMVSPMTISlpfklllfvl  200
            L +PAF +SEL  +FEIGFL+Y+PFI IDLIVSN+LLA+GM MVSPMT+SLP+KLLLFV+
Sbjct  125  LAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVM  184

Query  201  lDGWTKLTHGLVLSY  215
            + GW++L ++L  SY
Sbjct  185  VSGWSRLLDSLFYSY  199

129) ssaR in NC_021848


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  135 bits (497),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 89/195 (46%), Positives = 143/195 (74%), Gaps = 0/195 (0%)

Query  21   PFIAMMATSFVKLAVVFSLLRNALGVQQIPPNMALYGLAIILSIFIMAPVGFETYDYVKQ  80
            PF+ ++ T+F+K+A+ + + RNA+GVQQ+PPNMALYG+A+  ++F+MAPV+ E  + V +
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  81   HDISLEDSASVEGLIESGLQPYREFLKKHIRETEAIFFTDAARTLWPQKYVDRLESDSll  140
            H + L ++  +++   + ++P + F+ ++        + D ++ +WP+   D+   + LL
Sbjct  65   HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLL  124

Query  141  lllPAFTVSELTRAFEIGFLLYLPFIAIDLIVSNILLAMGMMMVSPMTISlpfklllfvl  200
            L +PAF +SEL  +FEIGFL+Y+PFI IDLIVSN+LLA+GM MVSPMT+SLP+KLLLFV+
Sbjct  125  LAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVM  184

Query  201  lDGWTKLTHGLVLSY  215
            + GW++L ++L  SY
Sbjct  185  VSGWSRLLDSLFYSY  199

130) ssaR in NC_021847


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  135 bits (497),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 89/195 (46%), Positives = 143/195 (74%), Gaps = 0/195 (0%)

Query  21   PFIAMMATSFVKLAVVFSLLRNALGVQQIPPNMALYGLAIILSIFIMAPVGFETYDYVKQ  80
            PF+ ++ T+F+K+A+ + + RNA+GVQQ+PPNMALYG+A+  ++F+MAPV+ E  + V +
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  81   HDISLEDSASVEGLIESGLQPYREFLKKHIRETEAIFFTDAARTLWPQKYVDRLESDSll  140
            H + L ++  +++   + ++P + F+ ++        + D ++ +WP+   D+   + LL
Sbjct  65   HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLL  124

Query  141  lllPAFTVSELTRAFEIGFLLYLPFIAIDLIVSNILLAMGMMMVSPMTISlpfklllfvl  200
            L +PAF +SEL  +FEIGFL+Y+PFI IDLIVSN+LLA+GM MVSPMT+SLP+KLLLFV+
Sbjct  125  LAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVM  184

Query  201  lDGWTKLTHGLVLSY  215
            + GW++L ++L  SY
Sbjct  185  VSGWSRLLDSLFYSY  199

131) VP1672 in NC_004603


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  135 bits (497),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 89/195 (46%), Positives = 143/195 (74%), Gaps = 0/195 (0%)

Query  21   PFIAMMATSFVKLAVVFSLLRNALGVQQIPPNMALYGLAIILSIFIMAPVGFETYDYVKQ  80
            PF+ ++ T+F+K+A+ + + RNA+GVQQ+PPNMALYG+A+  ++F+MAPV+ E  + V +
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  81   HDISLEDSASVEGLIESGLQPYREFLKKHIRETEAIFFTDAARTLWPQKYVDRLESDSll  140
            H + L ++  +++   + ++P + F+ ++        + D ++ +WP+   D+   + LL
Sbjct  65   HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLL  124

Query  141  lllPAFTVSELTRAFEIGFLLYLPFIAIDLIVSNILLAMGMMMVSPMTISlpfklllfvl  200
            L +PAF +SEL  +FEIGFL+Y+PFI IDLIVSN+LLA+GM MVSPMT+SLP+KLLLFV+
Sbjct  125  LAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVM  184

Query  201  lDGWTKLTHGLVLSY  215
            + GW++L ++L  SY
Sbjct  185  VSGWSRLLDSLFYSY  199

132) Aave_0449 in NC_008752


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  135 bits (497),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 80/193 (42%), Positives = 145/193 (76%), Gaps = 2/193 (1%)

Query  27   MIVTSYTKVVVVLGLLRNALGVQQVPPNMVLNGIAIIISVYVMAPVAMEASDRMQMLPPS  86
            ++ T++ K+ + L + RNA+GVQQVPPNM L GIA+  +++VMAPVA E  +R++    +
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVH--DHP  66

Query  87   AQSSNTQQMLAAASAAREPFRKFLDKHADAAEKAFFLKSAQALWPEERARSLQADDLVVL  146
             + +NT+++ A+A +  EP+++F+ +++D+   A +L ++Q +WP E A     +DL++ 
Sbjct  67   LELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLA  126

Query  147  APAFLLTELTAAFRIGFLLYLAFIIVELVIANVLLAMGLSQVSPTNVAIPFKLLLFVVLD  206
             PAF+L+EL A+F IGFL+Y++FI+++L+++N+LLA+G+  VSP  +++P+KLLLFV++ 
Sbjct  127  IPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVS  186

Query  207  GWSQVMHGLVMTY  219
            GWS+++++L  +Y
Sbjct  187  GWSRLLDSLFYSY  199

133) Acav_0515 in NC_015138


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  135 bits (496),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 79/193 (41%), Positives = 145/193 (76%), Gaps = 2/193 (1%)

Query  27   MIVTSYTKVVVVLGLLRNALGVQQVPPNMVLNGIAIIISVYVMAPVAMEASDRMQMLPPS  86
            ++ T++ K+ + L + RNA+GVQQVPPNM L GIA+  +++VMAPVA E  +R++    +
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVH--DHP  66

Query  87   AQSSNTQQMLAAASAAREPFRKFLDKHADAAEKAFFLKSAQALWPEDRARSLQADDLVVL  146
             + +NT+++ A+A +  EP+++F+ +++D+   A +L ++Q +WP + A     +DL++ 
Sbjct  67   LELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLA  126

Query  147  APAFLLTELTAAFRIGFLLYLAFIIVELVIANVLLAMGLSQVSPTNVAIPFKLLLFVVLD  206
             PAF+L+EL A+F IGFL+Y++FI+++L+++N+LLA+G+  VSP  +++P+KLLLFV++ 
Sbjct  127  IPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVS  186

Query  207  GWSQVMHGLVMTY  219
            GWS+++++L  +Y
Sbjct  187  GWSRLLDSLFYSY  199

134) Meso_0110 in NC_008254


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  135 bits (496),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 80/199 (41%), Positives = 145/199 (73%), Gaps = 0/199 (0%)

Query  20   LSFIPFIVVMGTAFTKISIVLMLLRNAIGVQQAPSGLVINSIALTLTVFVMVPVGNAIIT  79
            +S+IPF++++ TAF KI++ L++ RNAIGVQQ P+ + + +IAL+ T+FVM PV++ +  
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  80   QVQQQQLGFTGWENVSQLYSVVSEAFTGYLKQFSSPRELQFFMDAARKMWPETLHGQITT  139
            +V+++ L +   E++      V E++  ++ + + P  +  ++D +++MWP  + +Q + 
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  140  DNVFILLPAHVTSELTRAFQIAFLIFLPFVVVDMVVSNILLAMGAMMVPPMLVSLPIKIL  199
            +++++ +PA V SEL  +F+I+FLI++PF+V+D++VSN+LLA+G  MV+PM +SLP+K+L
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  200  LFVAADGWALLLHNLVLSY  218
            LFV   GW+ LL++L  SY
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

135) hrcR in NC_011983


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  135 bits (494),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 87/199 (44%), Positives = 141/199 (71%), Gaps = 0/199 (0%)

Query  18   ISILPVIAVVATSFTKIAVVLLIVRNAIGIQQTPPNLLVFAIAIVLSAFVMNPILQQCWQ  77
            +S++P + +V T+F KIA+ LLI RNAIG+QQ PPN+ +++IA+  + FVM P+ ++  Q
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  78   VLLRADVHFDTINGLAAGLSEVGAPLKAFMMKFSDEEVRQFFVNSSQRIWGDTATLPASP  137
             +    ++++  + L A+   V  PL+ FM + +D +V   +++++QR+W    +  AS 
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  138  DDITVLTPSFLVSELTRAFEIGFLLYLPFLMIDFAVSAILVALGMQMMSPTVVSTPFKLL  197
            +D+ +  P+F++SEL  +FEIGFL+Y+PF++ID+ VS +L+ALGMQM+SP  +S P+KLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  198  LFVGVDGWRRLLEGLVLSY  216
            LFV V GW RLL++L  SY
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

136) yscR in NC_016642


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  135 bits (494),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 80/189 (43%), Positives = 143/189 (76%), Gaps = 0/189 (0%)

Query  28   TSFIKLSVVLLLVRNALGVQQIPPNMALNALAIILSGYIMLPVFLQTFEILEKGNYSIAT  87
            T+F+K+++ LL+ RNA+GVQQ+PPNMAL ++A+  + ++M PV  +  + ++     ++ 
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  88   VEDMKTTFVAAKGPLEEFLAKHADSKEKAFFLEASRQLWPAEVADSMSADSIAILLPAYT  147
             E ++++  +   PL+ F+++++D+   A +L+ ++++WP E+AD  S + + + +PA+ 
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  148  VSQLREAFEIGFLLYLPFLAIDLVVSNILLAMGMMMVSPLTISLPFKLFLFVAVDGWSRL  207
            +S+L+ +FEIGFL+Y+PF+ IDL+VSN+LLA+GM MVSP+T+SLP+KL+LFV V GWSRL
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  208  ILGLIKTYV  216
            + +L+ +Y+
Sbjct  192  LDSLFYSYM  200

137) escR in NC_013716


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  135 bits (494),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 77/186 (42%), Positives = 143/186 (77%), Gaps = 6/186 (3%)

Query  32   TSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTIFIMSPIILQINDNISQEPINYTD  91
            T+FLKI++ L I +NA+G+QQVPPNMAL +++L  T+F+M+P+  ++++ + ++P++  +
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  92   SDFYQKVDGKIISPYRIFLENNTNKENI-DFFENVAK---KKLGNETSLKKDSLFILLPA  147
            ++  Q     +I P + F+  NT+ + + ++++N  +   K +++++S  K+ L++ +PA
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQAS--KNDLLLAIPA  129

Query  148  FTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILIGGWQ  207
            F +++L+A+F IGFL+Y+PFI IDLI+SN+LLALGM MVSP+T+S+P+K+LLF++++GW 
Sbjct  130  FVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWS  189

Query  208  KLFEFL  213
            +L++ L
Sbjct  190  RLLDSL  195

138) mlr8766 in NC_002678


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  134 bits (492),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 79/179 (45%), Positives = 133/179 (75%), Gaps = 0/179 (0%)

Query  38   LFLVRNALGTQTIPPNIALYAVALILTMFLSAPVVEQTYDRMTDPKLHYQTFDDWVSAAK  97
            L++ RNA+G Q +PPN+ALY++AL  TMF+ APV ++  +R+ D  L+    +   ++A+
Sbjct  21   LLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGNTEKLQASAR  80

Query  98   SGSEPLRDHLKKFTNEEQRQFFLSSTEKVWPAEMRAKATVDDLSILVPSFLISELKRAFE  157
            +  EPL+  + + T+ +    +L +T+++WP EM  +A+ +DL + +P+F++SEL+ +FE
Sbjct  81   TVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFVLSELQAGFE  140

Query  158  IGFLLYLPFIVIDLIVTTILMAMGMSMVSPTLISVPFKLFVFVAIDGWSKLMHGLVLSY  216
            IGFL+Y+PFIVIDLIV+ +L+A+GM MVSP  +S+P+KL++FV + GWS+L+++L  SY
Sbjct  141  IGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRLLDSLFYSY  199

139) hrcR in NC_014310


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  133 bits (489),  Expect = 6e-33, Method: Compositional matrix adjust.
 Identities = 85/201 (43%), Positives = 141/201 (71%), Gaps = 2/201 (0%)

Query  16   IALLPFAAMVVTSYTKIVVVLGLLRNALGVQQVPPNMVLNGIAMIVSCFIMAPVGMEAMQ  75
            ++L+PF  +V T++ KI + L + RNA+GVQQVPPNM L GIA+  + F+MAPV+ E  Q
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  76   RAHVQINAQGGTNITQVMPLLDAARDPFREFLNKHTNAREKAFFMRSAQQLWPPAKAALL  135
            R H +    G T+  Q  +   +  +P++ F+ ++T++   A ++ ++Q++WP   A   
Sbjct  61   RVHDHPLELGNTEKLQASA--RTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA  118

Query  136  KDDDLIVLAPAFTLTELTSAFRIGFLLYLAFIVIDLVIANLLMALGLSQVTPSNVAIPFK  195
              +DL++  PAF L+EL ++F IGFL+Y++FIVIDL+++NLL+ALG+  V+P  +++P+K
Sbjct  119  SKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLK  178

Query  196  LLLFVVMDGWSVLVHGLVNTY  216
            LLLFV++ GWS L+++L  +Y
Sbjct  179  LLLFVMVSGWSRLLDSLFYSY  199

140) SFHH103_04305 in NC_018294


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  133 bits (489),  Expect = 7e-33, Method: Compositional matrix adjust.
 Identities = 77/179 (44%), Positives = 129/179 (73%), Gaps = 0/179 (0%)

Query  38   LFLVRNALGTQTIPPNIVLYAAALILTMFVSAPIAEQTYDRITDPRLRYQSLDDWAEAAK  97
            L++ RNA+G Q +PPN+ LY+ AL  TMFV AP+A++  +R+ D  L   + +    +A+
Sbjct  21   LLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGNTEKLQASAR  80

Query  98   AGSQPLLEHLKKFTNEEQRRFFLSSTEKVWPEEMRARVTADDFAILVPSFLISELKRAFE  157
            +  +PL   + + T+ +    +L +T+++WP EM  + + +D+ + +P+F++SEL+ +FE
Sbjct  81   TVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFVLSELQAGFE  140

Query  158  IGFLLYLPFIVIDLIVTTILMAMGMSMVSPTIIAVPFKLFLFVAIDGWSRLMHGLVLSY  216
            IGFL+Y+PFIVIDLIV+ +L+A+GM MVSP  +++P+KL+LFV + GWSRL+++L  SY
Sbjct  141  IGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRLLDSLFYSY  199

141) USDA257_p02850 in NC_018179


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  133 bits (489),  Expect = 7e-33, Method: Compositional matrix adjust.
 Identities = 77/179 (44%), Positives = 129/179 (73%), Gaps = 0/179 (0%)

Query  38   LFLVRNALGTQTIPPNIVLYAAALILTMFVSAPIAEQTYDRITDPRLRYQSLDDWAEAAK  97
            L++ RNA+G Q +PPN+ LY+ AL  TMFV AP+A++  +R+ D  L   + +    +A+
Sbjct  21   LLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGNTEKLQASAR  80

Query  98   AGSQPLLEHLKKFTNEEQRRFFLSSTEKVWPEEMRARVTADDFAILVPSFLISELKRAFE  157
            +  +PL   + + T+ +    +L +T+++WP EM  + + +D+ + +P+F++SEL+ +FE
Sbjct  81   TVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFVLSELQAGFE  140

Query  158  IGFLLYLPFIVIDLIVTTILMAMGMSMVSPTIIAVPFKLFLFVAIDGWSRLMHGLVLSY  216
            IGFL+Y+PFIVIDLIV+ +L+A+GM MVSP  +++P+KL+LFV + GWSRL+++L  SY
Sbjct  141  IGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRLLDSLFYSY  199

142) REMIM1_PE00285 in NC_021909


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  133 bits (487),  Expect = 9e-33, Method: Compositional matrix adjust.
 Identities = 76/186 (41%), Positives = 132/186 (71%), Gaps = 0/186 (0%)

Query  31   FIKVSVVLFLVRNALGTQTIPPNIVLYAAALILTLFISAPVIEQTYIRIADPKLRYQTLD  90
            F+K+++ L++ RNA+G Q +PPN+ LY+ AL  T+F+ APV ++   R+ D  L     +
Sbjct  14   FLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGNTE  73

Query  91   DWVTAAEEGREPLRDYLKKFTSEEQRRFFLSSTKQVWPEEMRARTTPDDFAILVPSFLIS  150
               ++A    EPL+ ++ + T  +    +L +T+++WP EM  +++ +D+ + +P+F++S
Sbjct  74   KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFVLS  133

Query  151  ELKRAFEIGFLLYLPFICIDLIVTTILMAMGMSMVSPTVIAVPFKLFLFVTIDGWSQLMH  210
            EL+ +FEIGFL+Y+PFI IDLIV+ +L+A+GM MVSP  +++P+KL+LFV + GWS+L++
Sbjct  134  ELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRLLD  193

Query  211  GLVLSY  216
            +L  SY
Sbjct  194  SLFYSY  199

143) rhcR in NC_000914


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  132 bits (486),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 78/179 (44%), Positives = 128/179 (72%), Gaps = 0/179 (0%)

Query  38   LFLVRNALGTQTIPPNIVLYAAALILTMFVSAPVAEQTYDRITDPRLRYQSLDDWAEAAK  97
            L++ RNA+G Q +PPN+ LY+ AL  TMFV APVA++  +R+ D  L   + +    +A+
Sbjct  21   LLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGNTEKLQASAR  80

Query  98   AGSQPLLEHLKKFTNEEQRRFFLSSTEKVWPEEMRAGVTADDFAILVPSFLISELKRAFE  157
            +  +PL   + + T+ +    +L +T+++WP EM    + +D+ + +P+F++SEL+ +FE
Sbjct  81   TVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFVLSELQAGFE  140

Query  158  IGFLLYLPFIVIDLIVTTILMAMGMSMVSPTIIAVPFKLFLFVAIDGWSRLMHGLVLSY  216
            IGFL+Y+PFIVIDLIV+ +L+A+GM MVSP  +++P+KL+LFV + GWSRL+++L  SY
Sbjct  141  IGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRLLDSLFYSY  199

144) hrcR in NC_017575


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  132 bits (485),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 84/201 (42%), Positives = 141/201 (71%), Gaps = 2/201 (0%)

Query  16   IALLPFAAMVVTSYTKIVVVLGLLRNALGVQQVPPNMVLNGIAMIVSCFIMAPVGMEAMQ  75
            ++L+PF  +V T++ KI + L + RNA+GVQQVPPNM L GIA+  + F+MAPV+ E  Q
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  76   RAHVQLNAQGGANITQVMPLLDAARDPFREFLNKHTNAREKAFFMRSAQQLWPPAKAALL  135
            R H +    G ++  Q  +   +  +P++ F+ ++T++   A ++ ++Q++WP   A   
Sbjct  61   RVHDHPLELGNTEKLQASA--RTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA  118

Query  136  KEDDLIVLAPAFTLTELTSAFRIGFLLYLAFIVIDLVIANLLMALGLSQVTPSNVAIPFK  195
              +DL++  PAF L+EL ++F IGFL+Y++FIVIDL+++NLL+ALG+  V+P  +++P+K
Sbjct  119  SKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLK  178

Query  196  LLLFVVMDGWSVLVHGLVNTY  216
            LLLFV++ GWS L+++L  +Y
Sbjct  179  LLLFVMVSGWSRLLDSLFYSY  199

145) BUPH_00158 in NC_018672


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  128 bits (469),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 84/199 (43%), Positives = 143/199 (72%), Gaps = 0/199 (0%)

Query  17   ISLVPFVAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGVAILVSLYVMAPVgmqamq  76
            +SL+PF+ +V T++ KI + L + RNA+GVQQVPPNM L G+A+  +++VMAPV+ +  Q
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  77   smqgqaiagqPTQALIQVFSTAREPFRTFLQKHTNEREKRFFIRSANVVWPKDAAASLHE  136
             ++++++    T+ L     T  EP++ F+ ++T+      ++ +++ +WPK+ A     
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  137  NDLIVLAPAFTLTELTDAFKIGFLLYIAFIVIDLIIANVLLAMGLNQVTPTNVAIPFKLL  196
            NDL++  PAF L+EL  +F IGFL+YI+FIVIDLI++N+LLA+G++ V+P  +++P+KLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  197  LFVVMDGWSTLIHGLVMTY  215
            LFV++ GWS L+++L  +Y
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

146) BC1001_6056 in NC_015137


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  128 bits (467),  Expect = 4e-31, Method: Compositional matrix adjust.
 Identities = 83/199 (42%), Positives = 143/199 (72%), Gaps = 0/199 (0%)

Query  17   ISLVPFVAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGVAILVSLYVMAPVgmqamq  76
            +SL+PF+ +V T++ KI + L + RNA+GVQQVPPNM L G+A+  +++VMAPV+ +  Q
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  77   smqgqaiagqPTQALIQVFSAAREPFRTFLQKHTNEREKRFFIRSANVVWPKDAAASLHE  136
             ++++++    T+ L     +  EP++ F+ ++T+      ++ +++ +WPK+ A     
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  137  NDLIVLAPAFTLTELTDAFKIGFLLYIAFIVIDLIIANVLLAMGLNQVTPTNVAIPFKLL  196
            NDL++  PAF L+EL  +F IGFL+YI+FIVIDLI++N+LLA+G++ V+P  +++P+KLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  197  LFVVMDGWSTLIHGLVMTY  215
            LFV++ GWS L+++L  +Y
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

147) BC1003_3642 in NC_014540


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  127 bits (466),  Expect = 4e-31, Method: Compositional matrix adjust.
 Identities = 84/199 (43%), Positives = 143/199 (72%), Gaps = 0/199 (0%)

Query  17   ISLVPFVAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGVAILVSIYVMAPVgmqamq  76
            +SL+PF+ +V T++ KI + L + RNA+GVQQVPPNM L G+A+  +++VMAPV+ +  Q
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  77   smqgqaiagqPTQALIQVFSAAREPFRTFLQKHTNEREKRFFIRSANVVWPKEAASSLHE  136
             ++++++    T+ L     +  EP++ F+ ++T+      ++ +++ +WPKE A     
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  137  NDLIVLAPAFTLTELTDAFKIGFLLYIAFIVIDLIIANVLLAMGLNQVTPTNVAIPFKLL  196
            NDL++  PAF L+EL  +F IGFL+YI+FIVIDLI++N+LLA+G++ V+P  +++P+KLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  197  LFVVMDGWSTLIHGLVMTY  215
            LFV++ GWS L+++L  +Y
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

148) NT01EI_0960 in NC_012779


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  127 bits (464),  Expect = 7e-31, Method: Compositional matrix adjust.
 Identities = 83/192 (44%), Positives = 145/192 (76%), Gaps = 1/192 (0%)

Query  24   IVMGTSFLKLSVVFALLRNALGIQQIPPNlalyglaliltlFIMTPVGTAVQARLADAPA  83
            +++ T+FLK+++ + + RNA+G+QQ+PPN+ALYG+AL  T+F+M+PV+  +Q R+ D P 
Sbjct  8    LIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPL  67

Query  84   Q-AQTTLLSRLSDNTLDPYRQFLRQHTSAKQLKFFRQVATKSWPASVREKISDNSLLLLM  142
            + ++T  L   +   ++P ++F+ ++T +  +  + + + + WP  + ++ S N LLL +
Sbjct  68   ELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFAVSQLVEAFQIGLLLFLPFIAIDLIVSNILLAMGMMMVSPMTISMPFKLLVFILVGG  202
            PAF +S+L  +F+IG+L+++PFI IDLIVSN+LLA+GM MVSPMT+S+P+KLL+F++V+G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDKILGQLLLSY  214
            W ++L+ L+ SY
Sbjct  188  WSRLLDSLFYSY  199

149) SARI_01563 in NC_010067


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  127 bits (464),  Expect = 7e-31, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 133/188 (71%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VADAPFWMSEWDSKALAPYRQFLQKNSEEKEASYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            ++++   +       + P ++F+ +N++    + + +  +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

150) SG1305 in NC_007712


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  125 bits (459),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 84/185 (46%), Positives = 128/185 (70%), Gaps = 3/185 (1%)

Query  28   TSFLKLAVVLSILRNALGIQQVPPNMALYGLALILSLFIMAPTA--LAVKAQWHPVAAPG  85
            T+FLK+A+ L I RNA+G+QQVPPNMALYG+AL  ++F+MAP A  +  + + HP+   G
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLEL-G  70

Query  86   DTPWASGWDGKALMPYRQFLRRNADEKEIRYFHQLVTKTWPEEARRRVRPDSLLILLPAF  145
            +T    +     + P ++F+ RN+D   +  + +   + WP E   +   + LL+ +PAF
Sbjct  71   NTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAF  130

Query  146  TVSQLSQAFRIGLLIYLPFLAIDLLVSNVLLAMGMMMVSPMTISLPFKLLIFMLAGGWDL  205
             +S+L  +F IG+LIY+PF+ IDL+VSN+LLA+GM MVSPMT+SLP+KLL+F++ +GW  
Sbjct  131  VLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSR  190

Query  206  ILSQL  210
            +L  L
Sbjct  191  LLDSL  195

151) epaP in NC_011149


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  125 bits (456),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      + +  +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAKL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

152) STAUR_3046 in NC_014623


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  125 bits (456),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 83/205 (41%), Positives = 146/205 (72%), Gaps = 9/205 (4%)

Query  74   VPFMLMMVTSFVKISVVLSIVRSALGTQQIPPTQVITGLAVILTVYIMAPVGQEMYKAAK  133
            +PF+L++ T+F+KI++ L I R+A+G QQ+PP   + G+A+  T+++MAPV++EM    +
Sbjct  4    IPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEM--QQR  61

Query  134  VDIWAKGPSLLSSETVGTLLEAADRS-KEPLRDFLVKKVKNKDRALFFHLAKKMRKAEDR  192
            V+       L ++E     L+A+ R+  EPL+ F+ ++      A +++ +++M+  E  
Sbjct  62   VH--DHPLELGNTEK----LQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMA  115

Query  193  KDIGDRDFMIIIPAFVVSELKEAFQIGFLLFVPFIVIDMVVANILLALGMHMLSPTTISM  252
             + +  D+++ IPAFV+SEL+ +F+IGFL+++PFIVID++V+N+LLALGM+M+SP T+S+
Sbjct  116  DQASKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSL  175

Query  253  PFKLLLFVLVDGWYLIAKGLVVGYL  277
            P+KLLLFV+V GW  +  +L  +Y+
Sbjct  176  PLKLLLFVMVSGWSRLLDSLFYSYM  200

153) ssaR in NC_021820


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  124 bits (454),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      + +  +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

154) ssaR in NC_006905


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  124 bits (454),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      + +  +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

155) ssaR in NC_021818


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  124 bits (454),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      + +  +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

156) epaP in NC_011205


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  124 bits (454),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      + +  +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

157) SEEH1578_16330 in NC_021810


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  124 bits (454),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      + +  +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

158) SU5_02035 in NC_017623


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  124 bits (454),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      + +  +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

159) ssaR in NC_021812


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  124 bits (454),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      + +  +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

160) epaP in NC_011083


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  124 bits (454),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      + +  +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

161) CFSAN001992_04495 in NC_020307


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  124 bits (454),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      + +  +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

162) SSPA1332 in NC_011147


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  124 bits (454),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      + +  +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

163) yscR in NC_006511


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  124 bits (454),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      + +  +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

164) SPAB_01906 in NC_010102


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  124 bits (454),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      + +  +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

165) yscR in NC_012125


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  124 bits (454),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      + +  +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

166) epaP in NC_011094


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  124 bits (454),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      + +  +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

167) ssaR in NC_016856


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  124 bits (454),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      + +  +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

168) yscR in NC_017046


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  124 bits (454),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      + +  +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

169) STMMW_14241 in NC_016854


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  124 bits (454),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      + +  +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

170) ssaR in NC_003197


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  124 bits (454),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      + +  +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

171) yscR in NC_016810


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  124 bits (454),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      + +  +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

172) ssaR in NC_016857


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  124 bits (454),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      + +  +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

173) STMDT12_C14350 in NC_016860


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  124 bits (454),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      + +  +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

174) STU288_03415 in NC_021151


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  124 bits (454),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      + +  +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

175) ssaR in NC_016863


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  124 bits (454),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      + +  +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

176) ssaR in NC_021814


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  124 bits (454),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      + +  +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

177) LILAB_35715 in NC_015711


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  124 bits (452),  Expect = 5e-30, Method: Compositional matrix adjust.
 Identities = 83/201 (42%), Positives = 140/201 (70%), Gaps = 2/201 (0%)

Query  42   MSLLPFAVLMLTSFSKIAVVLSLARSAMGTQQAPPTIVLTGLAAVLTGHIMAPVMERMYE  101
            MSL+PF +++ T+F KIA+ L ++R+A+G QQ PP + L G+A   T  +MAPV + M  
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEM--  58

Query  102  AGQVAYTQVASGSGAEMLSAASRVSEPLRAFLVKHGSPEERARFVDLARELRPVEELESV  161
              +V    +  G+   + ++A  V EPL+ F+ ++  P+  A+++D ++ ++P E  +  
Sbjct  59   QQRVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA  118

Query  162  RETDLFVVIPAFVITELKEAFQIGFLVFLPFLVLDMVIANVLLALGMQTLSPSQVSLPFK  221
               DL++ IPAFV++EL+ +F+IGFL+++PF+V+D++++N+LLALGMQ +SP  +SLP+K
Sbjct  119  SKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLK  178

Query  222  ILLFVAVDGWSLLARGLILGY  242
            +LLFV V GWS L  +L+ +Y
Sbjct  179  LLLFVMVSGWSRLLDSLFYSY  199

178) yscR in NC_003198


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  124 bits (453),  Expect = 5e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGFALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      + +  +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

179) STBHUCCB_13770 in NC_016832


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  124 bits (453),  Expect = 5e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGFALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      + +  +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

180) TY21A_06540 in NC_021176


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  124 bits (453),  Expect = 5e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGFALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      + +  +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

181) yscR in NC_004631


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  124 bits (453),  Expect = 5e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 130/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGFALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      + +  +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

182) ssaR in NC_021844


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  123 bits (451),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 129/188 (69%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRSLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      +    +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

183) SBOV14161 in NC_022241


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  123 bits (451),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 129/188 (69%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRSLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      +    +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

184) ssaR in NC_011294


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  123 bits (451),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 129/188 (69%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRSLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      +    +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

185) ssaR in NC_011274


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  123 bits (451),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 129/188 (69%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRSLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      +    +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

186) ssaR in NC_022221


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  123 bits (451),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 129/188 (69%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRSLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      +    +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

187) ssaR in NC_016831


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  123 bits (451),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 129/188 (69%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRSLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      +    +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

188) epaP in NC_011080


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  123 bits (451),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 129/188 (69%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRSLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      +    +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

189) SN31241_24890 in NC_021902


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  123 bits (451),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 129/188 (69%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRSLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      +    +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

190) ssaR in NC_021984


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  123 bits (451),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 129/188 (69%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  9    IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE  68

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRSLIKRTWPEDIKRKIKPDSLLILI  142
            ++ +           + P ++F+ +N++      +    +R WP ++  +   + LL+ I
Sbjct  69   LGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMT+SLP+KLL+F++ +G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  188  WSRLLDSL  195

191) XC_3016 in NC_007086


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  123 bits (451),  Expect = 7e-30, Method: Compositional matrix adjust.
 Identities = 85/195 (44%), Positives = 134/195 (69%), Gaps = 1/195 (0%)

Query  20   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  79
            PF  +V T++ KI + L + RNAIGVQQVPPNM L G+AL  + FVMAPV+ E  +  ++
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  80   YSPG-ADNSRVVVLLDACREPFRQFLLKHTREREKAFFIRSAQQIWPKDKADTLKPDDLL  138
             +   ++  ++     +  EP+++F+ ++T     A ++ ++Q++WPK+ AD    +DLL
Sbjct  65   HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLL  124

Query  139  VLAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  198
            +  PAF LSEL  +F IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+KLLLFV 
Sbjct  125  LAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVM  184

Query  199  LDGWSMLIHGLVLSY  213
            + GWS L+++L  SY
Sbjct  185  VSGWSRLLDSLFYSY  199

192) hrcR in NC_003902


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  123 bits (451),  Expect = 7e-30, Method: Compositional matrix adjust.
 Identities = 85/195 (44%), Positives = 134/195 (69%), Gaps = 1/195 (0%)

Query  20   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  79
            PF  +V T++ KI + L + RNAIGVQQVPPNM L G+AL  + FVMAPV+ E  +  ++
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  80   YSPG-ADNSRVVVLLDACREPFRQFLLKHTREREKAFFIRSAQQIWPKDKADTLKPDDLL  138
             +   ++  ++     +  EP+++F+ ++T     A ++ ++Q++WPK+ AD    +DLL
Sbjct  65   HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLL  124

Query  139  VLAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  198
            +  PAF LSEL  +F IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+KLLLFV 
Sbjct  125  LAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVM  184

Query  199  LDGWSMLIHGLVLSY  213
            + GWS L+++L  SY
Sbjct  185  VSGWSRLLDSLFYSY  199

193) xccb100_3079 in NC_010688


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  123 bits (451),  Expect = 7e-30, Method: Compositional matrix adjust.
 Identities = 85/195 (44%), Positives = 134/195 (69%), Gaps = 1/195 (0%)

Query  20   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  79
            PF  +V T++ KI + L + RNAIGVQQVPPNM L G+AL  + FVMAPV+ E  +  ++
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  80   YSPG-ADNSRVVVLLDACREPFRQFLLKHTREREKAFFIRSAQQIWPKDKADTLKPDDLL  138
             +   ++  ++     +  EP+++F+ ++T     A ++ ++Q++WPK+ AD    +DLL
Sbjct  65   HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLL  124

Query  139  VLAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  198
            +  PAF LSEL  +F IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+KLLLFV 
Sbjct  125  LAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVM  184

Query  199  LDGWSMLIHGLVLSY  213
            + GWS L+++L  SY
Sbjct  185  VSGWSRLLDSLFYSY  199

194) XOO_0095 in NC_007705


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  123 bits (451),  Expect = 7e-30, Method: Compositional matrix adjust.
 Identities = 84/195 (44%), Positives = 132/195 (68%), Gaps = 1/195 (0%)

Query  20   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  79
            PF  +V T++ KI + L + RNAIGVQQVPPNM L G+AL  + FVMAPV+ E  +  ++
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  80   YGAG-SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLL  138
                 ++  ++     +  EP+++F+ ++T     A ++ ++Q++WPK+ A     +DLL
Sbjct  65   HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLL  124

Query  139  ILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  198
            +  PAF LSEL  +F IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+KLLLFV 
Sbjct  125  LAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVM  184

Query  199  MDGWSMLIHGLVLSY  213
            + GWS L+++L  SY
Sbjct  185  VSGWSRLLDSLFYSY  199

195) epaP in NC_010717


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  123 bits (451),  Expect = 7e-30, Method: Compositional matrix adjust.
 Identities = 84/195 (44%), Positives = 132/195 (68%), Gaps = 1/195 (0%)

Query  20   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  79
            PF  +V T++ KI + L + RNAIGVQQVPPNM L G+AL  + FVMAPV+ E  +  ++
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  80   YGAG-SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLL  138
                 ++  ++     +  EP+++F+ ++T     A ++ ++Q++WPK+ A     +DLL
Sbjct  65   HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLL  124

Query  139  ILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  198
            +  PAF LSEL  +F IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+KLLLFV 
Sbjct  125  LAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVM  184

Query  199  MDGWSMLIHGLVLSY  213
            + GWS L+++L  SY
Sbjct  185  VSGWSRLLDSLFYSY  199

196) hrcR in NC_003919


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  123 bits (450),  Expect = 8e-30, Method: Compositional matrix adjust.
 Identities = 84/195 (44%), Positives = 132/195 (68%), Gaps = 1/195 (0%)

Query  20   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  79
            PF  +V T++ KI + L + RNAIGVQQVPPNM L G+AL  + FVMAPV+ E  +  ++
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  80   YGAG-SDNSRVVVLLDACREPFRQFLLKHTREREKAFFMRSAQQIWPKDKAATLKSDDLL  138
                 ++  ++     +  EP+++F+ ++T     A ++ ++Q++WPK+ A     +DLL
Sbjct  65   HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLL  124

Query  139  VLAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  198
            +  PAF LSEL  +F IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+KLLLFV 
Sbjct  125  LAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVM  184

Query  199  MDGWSMLIHGLVLSY  213
            + GWS L+++L  SY
Sbjct  185  VSGWSRLLDSLFYSY  199

197) hrcR in NC_016010


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  123 bits (450),  Expect = 8e-30, Method: Compositional matrix adjust.
 Identities = 84/195 (44%), Positives = 132/195 (68%), Gaps = 1/195 (0%)

Query  20   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  79
            PF  +V T++ KI + L + RNAIGVQQVPPNM L G+AL  + FVMAPV+ E  +  ++
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  80   YGAG-SDNSRVVVLLDACREPFRQFLLKHTREREKAFFMRSAQQIWPKDKAATLKSDDLL  138
                 ++  ++     +  EP+++F+ ++T     A ++ ++Q++WPK+ A     +DLL
Sbjct  65   HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLL  124

Query  139  VLAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  198
            +  PAF LSEL  +F IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+KLLLFV 
Sbjct  125  LAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVM  184

Query  199  MDGWSMLIHGLVLSY  213
            + GWS L+++L  SY
Sbjct  185  VSGWSRLLDSLFYSY  199

198) XAC29_02060 in NC_020800


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  123 bits (450),  Expect = 8e-30, Method: Compositional matrix adjust.
 Identities = 84/195 (44%), Positives = 132/195 (68%), Gaps = 1/195 (0%)

Query  20   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  79
            PF  +V T++ KI + L + RNAIGVQQVPPNM L G+AL  + FVMAPV+ E  +  ++
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  80   YGAG-SDNSRVVVLLDACREPFRQFLLKHTREREKAFFMRSAQQIWPKDKAATLKSDDLL  138
                 ++  ++     +  EP+++F+ ++T     A ++ ++Q++WPK+ A     +DLL
Sbjct  65   HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLL  124

Query  139  VLAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  198
            +  PAF LSEL  +F IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+KLLLFV 
Sbjct  125  LAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVM  184

Query  199  MDGWSMLIHGLVLSY  213
            + GWS L+++L  SY
Sbjct  185  VSGWSRLLDSLFYSY  199

199) hrcR in NC_017271


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  123 bits (450),  Expect = 8e-30, Method: Compositional matrix adjust.
 Identities = 85/195 (44%), Positives = 134/195 (69%), Gaps = 1/195 (0%)

Query  20   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  79
            PF  +V T++ KI + L + RNAIGVQQVPPNM L G+AL  + FVMAPV+ E  +  ++
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  80   YSPG-AENSRVVVLLDACREPFRQFLLKHTREREKAFFIRSAQQIWPKDKADTLKPDDLL  138
             +   ++  ++     +  EP+++F+ ++T     A ++ ++Q++WPK+ AD    +DLL
Sbjct  65   HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLL  124

Query  139  VLAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  198
            +  PAF LSEL  +F IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+KLLLFV 
Sbjct  125  LAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVM  184

Query  199  LDGWSMLIHGLVLSY  213
            + GWS L+++L  SY
Sbjct  185  VSGWSRLLDSLFYSY  199

200) hrcR in NC_007508


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  123 bits (450),  Expect = 8e-30, Method: Compositional matrix adjust.
 Identities = 84/195 (44%), Positives = 132/195 (68%), Gaps = 1/195 (0%)

Query  20   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  79
            PF  +V T++ KI + L + RNAIGVQQVPPNM L G+AL  + FVMAPV+ E  +  ++
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  80   YGAG-SDNSRVVVLLDACREPFRQFLLKHTREREKAFFMRSAQQIWPKDKAATLKSDDLL  138
                 ++  ++     +  EP+++F+ ++T     A ++ ++Q++WPK+ A     +DLL
Sbjct  65   HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLL  124

Query  139  VLAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  198
            +  PAF LSEL  +F IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+KLLLFV 
Sbjct  125  LAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVM  184

Query  199  MDGWSMLIHGLVLSY  213
            + GWS L+++L  SY
Sbjct  185  VSGWSRLLDSLFYSY  199

201) hrcR in NC_020815


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  123 bits (450),  Expect = 8e-30, Method: Compositional matrix adjust.
 Identities = 84/195 (44%), Positives = 132/195 (68%), Gaps = 1/195 (0%)

Query  20   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  79
            PF  +V T++ KI + L + RNAIGVQQVPPNM L G+AL  + FVMAPV+ E  +  ++
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  80   YGAG-SDNSRVVVLLDACREPFRQFLLKHTREREKAFFMRSAQQIWPKDKAATLKSDDLL  138
                 ++  ++     +  EP+++F+ ++T     A ++ ++Q++WPK+ A     +DLL
Sbjct  65   HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLL  124

Query  139  VLAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  198
            +  PAF LSEL  +F IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+KLLLFV 
Sbjct  125  LAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVM  184

Query  199  MDGWSMLIHGLVLSY  213
            + GWS L+++L  SY
Sbjct  185  VSGWSRLLDSLFYSY  199

202) hrcR in NC_006834


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  123 bits (450),  Expect = 8e-30, Method: Compositional matrix adjust.
 Identities = 84/195 (44%), Positives = 132/195 (68%), Gaps = 1/195 (0%)

Query  32   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  91
            PF  +V T++ KI + L + RNAIGVQQVPPNM L G+AL  + FVMAPV+ E  +  ++
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  92   YGAG-SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLL  150
                 ++  ++     +  EP+++F+ ++T     A ++ ++Q++WPK+ A     +DLL
Sbjct  65   HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLL  124

Query  151  ILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  210
            +  PAF LSEL  +F IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+KLLLFV 
Sbjct  125  LAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVM  184

Query  211  MDGWSMLIHGLVLSY  225
            + GWS L+++L  SY
Sbjct  185  VSGWSRLLDSLFYSY  199

203) hrcR in NC_017267


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  123 bits (450),  Expect = 9e-30, Method: Compositional matrix adjust.
 Identities = 84/195 (44%), Positives = 132/195 (68%), Gaps = 1/195 (0%)

Query  20   PFAALVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  79
            PF  +V T++ KI + L + RNAIGVQQVPPNM L G+AL  + FVMAPV+ E  +  ++
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  80   YGAG-SDNSRIVVLLDACREPFRQFLLKHTREREKAFFMRSAQQIWPKDKAATLKSDDLL  138
                 ++  ++     +  EP+++F+ ++T     A ++ ++Q++WPK+ A     +DLL
Sbjct  65   HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLL  124

Query  139  ILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  198
            +  PAF LSEL  +F IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+KLLLFV 
Sbjct  125  LAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVM  184

Query  199  MDGWSILIHGLVLSY  213
            + GWS L+++L  SY
Sbjct  185  VSGWSRLLDSLFYSY  199

204) MXAN_5647 in NC_008095


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  122 bits (447),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 83/201 (42%), Positives = 140/201 (70%), Gaps = 2/201 (0%)

Query  17   MSLLPFAVLMLTSFSKIAVVLSLARSAMGTQQAPPTIVLTGLAAVLTGHIMAPVMERMYD  76
            MSL+PF +++ T+F KIA+ L ++R+A+G QQ PP + L G+A   T  +MAPV + M  
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEM--  58

Query  77   AGQVAYAEVASGSGAEMLSAASRVSEPLRAFLIKHGSAEERARFVDLARELRPVEEMDAV  136
              +V    +  G+   + ++A  V EPL+ F+ ++  ++  A+++D ++ ++P E  D  
Sbjct  59   QQRVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA  118

Query  137  RETDLFIVIPAFVITELKEAFQIGFLVFLPFLVLDMVIANVLLALGMQTLSPSQVSLPFK  196
               DL++ IPAFV++EL+ +F+IGFL+++PF+V+D++++N+LLALGMQ +SP  +SLP+K
Sbjct  119  SKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLK  178

Query  197  ILLFVAVDGWSLLARGLILGY  217
            +LLFV V GWS L  +L+ +Y
Sbjct  179  LLLFVMVSGWSRLLDSLFYSY  199

205) ssaR in NC_012751


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  118 bits (429),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 78/188 (42%), Positives = 137/188 (73%), Gaps = 0/188 (0%)

Query  24   VVMGTCFLKLSVVFSLLRNALGVQQTPPNIAIYGLALVLTIFIMAPVGLEVNESLKGEKL  83
            +++ T FLK+++ + + RNA+GVQQ PPN+A+YG+AL  T+F+MAPV+ E+++ + ++ L
Sbjct  8    LIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPL  67

Query  84   SQDFGTFVEQINSKALDPYRQFLLHNTSSEQINFFSDMIKNNWPKKYRDKVASDSLLILM  143
              +    ++      ++P ++F+ +NT ++ +  + D  +  WPK   D+ + + LL+ +
Sbjct  68   ELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  144  PAFTVSQLIEAFKIGLLLYLPFVAIDLIVSNILLAmgmmmmspmTISLPFKILIFLLVGG  203
            PAF +S+L  +F IG+L+Y+PF+ IDLIVSN+LLA+GM M+SPMT+SLP+K+L+F++V+G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  204  WDMILGQL  211
            W  +L+ L
Sbjct  188  WSRLLDSL  195

206) JCM7686_1775 in NC_022041


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  115 bits (421),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 83/200 (42%), Positives = 136/200 (68%), Gaps = 3/200 (1%)

Query  16   VVPFIVVSLTAFVKIAVVLFLVRSALGVQQTPPNLVLYGVTIVLTGYVMSPVLAASFAEM  75
            ++PF+++  TAF+KIA+ L++ R+A+GVQQ PPN+ LYG+++  T +VM+PV A    + 
Sbjct  3    LIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPV-AHEMQQR  61

Query  76   TNGGQMDALPPPSEWPGLIQRGLGPVREFLMRFTTPVDRAFFLSAAEEM-HKTSGVVPSE  134
             ++  ++ L       +  +  + P++ F+ R T P   A +L  ++ M  K  +  +S 
Sbjct  62   VHDHPLE-LGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  135  QDLFILAPAFVTAELTRAFEIGVMLYLPFIVVDLVITNILTAMGMMMVSPTVISLPFKLL  194
            +DL++  PAFV +EL  +FEIG ++Y+PFIV+DL+++N+L A+GM MVSP  +SLP+KLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  195  LFVAVDGWARLTHGLVMSYV  214
            LFV V GW+RL ++L  SY+
Sbjct  181  LFVMVSGWSRLLDSLFYSYM  200

207) fliP1 in NC_017030


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  114 bits (416),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 76/188 (41%), Positives = 137/188 (73%), Gaps = 0/188 (0%)

Query  53   TSFSKIAVVLSLARSAMGTQQAPPtvvltglavvltgHIMAPVMERMYDAGQAAYDEVHS  112
            T+F KIA+ L ++R+A+G QQ PP + L G+A+  T  +MAPV + M +  +    E+ +
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  113  GAQVLSAAKQVTEPLRAFLMKHGGPEERARFVDLARELRPPEESEQVQETDLFVVIPAFV  172
              ++ ++A+ V EPL+ F+ ++ +P+  A+++D ++ ++P E ++Q    DL++ IPAFV
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  173  ITELKEAFQIGFIVFLPFLVLDMVIANVLLALGMQTLSPGQVSLPFKILLFVAVDGWALL  232
            ++EL+ +F+IGF++++PF+V+D++++N+LLALGMQ +SP  +SLP+K+LLFV V GW+ L
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  233  ARGLILGY  240
              +L+ +Y
Sbjct  192  LDSLFYSY  199

208) MYSTI_06240 in NC_020126


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  113 bits (413),  Expect = 7e-27, Method: Compositional matrix adjust.
 Identities = 82/196 (42%), Positives = 140/196 (72%), Gaps = 2/196 (1%)

Query  42   FAVLMLTSFSKIAVVLSLARSAMGTQQAPPtvvltglavvltgHIMASVMERMYDAGQLA  101
            F +++ T+F KIA+ L ++R+A+G QQ PP + L G+A+  T  +MA+V + M    ++ 
Sbjct  6    FLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEM--QQRVH  63

Query  102  YQEMETGSGTKILESAAKVAEPLRTFLVKHGSAEERARFVDLARELRPPEEADTVSETDL  161
             + +E G+  K+  SA  V EPL+ F+ ++  ++  A+++D ++ ++P E AD  S  DL
Sbjct  64   DHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDL  123

Query  162  FVVIPAFVITELKEAFQIGFLVFLPFLVLDMVIANVLLALGMQTLSPSQVSLPFKILLFV  221
            ++ IPAFV++EL+ +F+IGFL+++PF+V+D++++N+LLALGMQ +SP  +SLP+K+LLFV
Sbjct  124  LLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFV  183

Query  222  AVDGWSLLARGLILGY  237
             V GWS L  +L+ +Y
Sbjct  184  MVSGWSRLLDSLFYSY  199

209) CK3_11030 in NC_021035


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  113 bits (413),  Expect = 7e-27, Method: Compositional matrix adjust.
 Identities = 78/194 (41%), Positives = 136/194 (71%), Gaps = 6/194 (3%)

Query  26   ALLPSIVVMMSSFMRIIIILSFTRNAMGVQQTPPNMVLTGMALFLSLYIMSPVIGQINTV  85
            +L+P ++++ ++F++I + L +TRNA+GVQQ PPNM L G+AL  ++++M+PV  +++  
Sbjct  2    SLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQR  61

Query  86   AYE-PYKNGEITQQEAVSR-MADPLKQFMLRNTEKDTLDHFVQ----MSKQEVKKDVKEY  139
              + P   G+  + +A +R + +PL++FM RNT+ D + H+++    M  +E+  +    
Sbjct  62   VHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKN  121

Query  140  PLTVVVPAFMTSELKKGFLAGFLIYLPFLLIDIVVSTTLMSMGMVMLPPTMVSLPFKLLL  199
             L + +PAF+ SEL+ GF  GFLIY+PF++ID++VS  L+++GM M++P  +SLP+KLLL
Sbjct  122  DLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLL  181

Query  200  FITVNGWELLFSSL  213
            F+ V+GW  L+ SL
Sbjct  182  FVMVSGWSRLLDSL  195

210) Atc_1493 in NC_015850


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  109 bits (396),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 81/197 (42%), Positives = 139/197 (71%), Gaps = 6/197 (3%)

Query  32   LPALLLMMTAFTRIIIVLSLLKQALGSTQMPPSQVMVGLALFLTFFVMAPVFQQINTEAL  91
            +P LL++ TAF +I + L + ++A+G  Q+PP+  + G+AL  T FVMAPV ++++    
Sbjct  4    IPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVH  63

Query  92   -QPLNDNKIDLVQAMAKAE-GPLRNFMLSQTRPDDLALFV----KLSGHKALEKPSDTPL  145
             +PL+  + + +QA A++   PL+ FM  +T PD +A ++    ++      +++S   L
Sbjct  64   DHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDL  123

Query  146  SLLVPAFITSELKTGFQIGFLIFIPFVIIDLVVAAVLMSLGMMMLSPVTVSFPLKLMLFV  205
             L +PAF+ SEL++GF+IGFLI+IPF++IDL+V+ +L++LGM M+SP+T+S+PLKL+LFV
Sbjct  124  LLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFV  183

Query  206  LVDGWDLVIGSLVQSFV  222
            +V GW  +++SL  S++
Sbjct  184  MVSGWSRLLDSLFYSYM  200

211) lfiP in NC_013716


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  109 bits (395),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 79/189 (42%), Positives = 135/189 (72%), Gaps = 8/189 (4%)

Query  56   VGLLPTLVLMMTCFTRFIIVLSLLRQALGLQQTPPNRILIGIALCLTMLVMRPIWLNIYD  115
            ++L+P L+++ T F ++ + L + R+A+G+QQ PPN  L GIAL  TM+VM P+  ++ +
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  116  RAV-VPFE-NDQMTLSDALSTAATPLKRFMLAQTNKKAMAQIMTIA------DVKGDAAD  167
            R    P+E  +   L  +  T   PL+RFM  +T+   +A+++  +      ++ ++A+ 
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  168  QDLTIVVPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLM  227
            +DL + +PA+VLSEL+++F+IGF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  228  LFVLIDGWS  236
            LFV++ GWS
Sbjct  181  LFVMVSGWS  189

212) fliP in NC_010498


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  106 bits (385),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 81/192 (43%), Positives = 131/192 (69%), Gaps = 16/192 (8%)

Query  62   LMMTC--FTRFIIVLSLLRQALGLQQTPPNRILIGIALSLTMLVMRPVWLN----IYDHA  115
            L++ C  F ++ + L + R+A+G+QQ PPN  L GIAL+ TM+VM PV  +    + DH 
Sbjct  7    LLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDH-  65

Query  116  VVPFE-NDQITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIG------GAKGNAADQDL  168
              P+E  +   L  +  T   PL+RFM  +TD   +A+++            ++A+ +DL
Sbjct  66   --PLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDL  123

Query  169  TIVVPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFV  228
             + +PA+VLSEL+++F+IGF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFV
Sbjct  124  LLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFV  183

Query  229  LIDGWSLTIGTL  240
            ++ GWS  +++L
Sbjct  184  MVSGWSRLLDSL  195

213) fliP2 in NC_017660


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  106 bits (385),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 80/192 (42%), Positives = 131/192 (69%), Gaps = 16/192 (8%)

Query  62   LMMTC--FTRFIIVLSLLRQALGLQQTPPNRILIGIALSLTMLVMRPIWLN----IYDHA  115
            L++ C  F ++ + L + R+A+G+QQ PPN  L GIAL+ TM+VM P+  +    + DH 
Sbjct  7    LLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDH-  65

Query  116  VVPFE-NDQITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIG------GAKGHAADQDL  168
              P+E  +   L  +  T   PL+RFM  +TD   +A+++            ++A+ +DL
Sbjct  66   --PLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDL  123

Query  169  SIVVPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFV  228
             + +PA+VLSEL+++F+IGF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFV
Sbjct  124  LLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFV  183

Query  229  LIDGWSLTIGTL  240
            ++ GWS  +++L
Sbjct  184  MVSGWSRLLDSL  195

214) EKO11_3667 in NC_016902


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  106 bits (385),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 80/192 (42%), Positives = 131/192 (69%), Gaps = 16/192 (8%)

Query  62   LMMTC--FTRFIIVLSLLRQALGLQQTPPNRILIGIALSLTMLVMRPIWLN----IYDHA  115
            L++ C  F ++ + L + R+A+G+QQ PPN  L GIAL+ TM+VM P+  +    + DH 
Sbjct  7    LLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDH-  65

Query  116  VVPFE-NDQITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIG------GAKGHAADQDL  168
              P+E  +   L  +  T   PL+RFM  +TD   +A+++            ++A+ +DL
Sbjct  66   --PLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDL  123

Query  169  SIVVPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFV  228
             + +PA+VLSEL+++F+IGF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFV
Sbjct  124  LLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFV  183

Query  229  LIDGWSLTIGTL  240
            ++ GWS  +++L
Sbjct  184  MVSGWSRLLDSL  195

215) fliP in NC_022364


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  106 bits (385),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 80/192 (42%), Positives = 131/192 (69%), Gaps = 16/192 (8%)

Query  62   LMMTC--FTRFIIVLSLLRQALGLQQTPPNRILIGIALSLTMLVMRPIWLN----IYDHA  115
            L++ C  F ++ + L + R+A+G+QQ PPN  L GIAL+ TM+VM P+  +    + DH 
Sbjct  7    LLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDH-  65

Query  116  VVPFE-NDQITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIG------GAKGHAADQDL  168
              P+E  +   L  +  T   PL+RFM  +TD   +A+++            ++A+ +DL
Sbjct  66   --PLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDL  123

Query  169  SIVVPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFV  228
             + +PA+VLSEL+++F+IGF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFV
Sbjct  124  LLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFV  183

Query  229  LIDGWSLTIGTL  240
            ++ GWS  +++L
Sbjct  184  MVSGWSRLLDSL  195

216) lfiP in NC_013364


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  106 bits (385),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 80/192 (42%), Positives = 131/192 (69%), Gaps = 16/192 (8%)

Query  62   LMMTC--FTRFIIVLSLLRQALGLQQTPPNRILIGIALSLTMLVMRPIWLN----IYDHA  115
            L++ C  F ++ + L + R+A+G+QQ PPN  L GIAL+ TM+VM P+  +    + DH 
Sbjct  7    LLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDH-  65

Query  116  VVPFE-NDQITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIG------GAKGHAADQDL  168
              P+E  +   L  +  T   PL+RFM  +TD   +A+++            ++A+ +DL
Sbjct  66   --PLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDL  123

Query  169  SIVVPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFV  228
             + +PA+VLSEL+++F+IGF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFV
Sbjct  124  LLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFV  183

Query  229  LIDGWSLTIGTL  240
            ++ GWS  +++L
Sbjct  184  MVSGWSRLLDSL  195

217) fliP in NC_013361


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  106 bits (385),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 80/192 (42%), Positives = 131/192 (69%), Gaps = 16/192 (8%)

Query  62   LMMTC--FTRFIIVLSLLRQALGLQQTPPNRILIGIALSLTMLVMRPIWLN----IYDHA  115
            L++ C  F ++ + L + R+A+G+QQ PPN  L GIAL+ TM+VM P+  +    + DH 
Sbjct  7    LLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDH-  65

Query  116  VVPFE-NDQITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIG------GAKGHAADQDL  168
              P+E  +   L  +  T   PL+RFM  +TD   +A+++            ++A+ +DL
Sbjct  66   --PLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDL  123

Query  169  SIVVPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFV  228
             + +PA+VLSEL+++F+IGF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFV
Sbjct  124  LLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFV  183

Query  229  LIDGWSLTIGTL  240
            ++ GWS  +++L
Sbjct  184  MVSGWSRLLDSL  195

218) lfiP in NC_017635


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  106 bits (385),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 80/192 (42%), Positives = 131/192 (69%), Gaps = 16/192 (8%)

Query  62   LMMTC--FTRFIIVLSLLRQALGLQQTPPNRILIGIALSLTMLVMRPIWLN----IYDHA  115
            L++ C  F ++ + L + R+A+G+QQ PPN  L GIAL+ TM+VM P+  +    + DH 
Sbjct  7    LLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDH-  65

Query  116  VVPFE-NDQITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIG------GAKGHAADQDL  168
              P+E  +   L  +  T   PL+RFM  +TD   +A+++            ++A+ +DL
Sbjct  66   --PLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDL  123

Query  169  SIVVPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFV  228
             + +PA+VLSEL+++F+IGF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFV
Sbjct  124  LLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFV  183

Query  229  LIDGWSLTIGTL  240
            ++ GWS  +++L
Sbjct  184  MVSGWSRLLDSL  195

219) fliP2 in NC_017664


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  106 bits (385),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 80/192 (42%), Positives = 131/192 (69%), Gaps = 16/192 (8%)

Query  62   LMMTC--FTRFIIVLSLLRQALGLQQTPPNRILIGIALSLTMLVMRPIWLN----IYDHA  115
            L++ C  F ++ + L + R+A+G+QQ PPN  L GIAL+ TM+VM P+  +    + DH 
Sbjct  7    LLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDH-  65

Query  116  VVPFE-NDQITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIG------GAKGHAADQDL  168
              P+E  +   L  +  T   PL+RFM  +TD   +A+++            ++A+ +DL
Sbjct  66   --PLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDL  123

Query  169  SIVVPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFV  228
             + +PA+VLSEL+++F+IGF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFV
Sbjct  124  LLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFV  183

Query  229  LIDGWSLTIGTL  240
            ++ GWS  +++L
Sbjct  184  MVSGWSRLLDSL  195

220) fliP in NC_010468


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  106 bits (385),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 78/191 (41%), Positives = 132/191 (70%), Gaps = 14/191 (7%)

Query  62   LMMTC--FTRFIIVLSLLRQALGLQQTPPNRILIGIALSLTMLVMRPIWLN----IYDHA  115
            L++ C  F ++ + L + R+A+G+QQ PPN  L GIAL+ TM+VM P+  +    + DH+
Sbjct  7    LLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHP  66

Query  116  VVPFENDRITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIG------GAKGNAADQDLS  169
            +   + ++  L  +  T   PL+RFM  +TD   +A+++            ++A+ +DL 
Sbjct  67   LELGNTEK--LQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLL  124

Query  170  IVVPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFVL  229
            + +PA+VLSEL+++F+IGF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFV+
Sbjct  125  LAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVM  184

Query  230  IDGWSLTIGTL  240
            + GWS  +++L
Sbjct  185  VSGWSRLLDSL  195

221) lfiP in NC_017626


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  106 bits (384),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 81/192 (43%), Positives = 131/192 (69%), Gaps = 16/192 (8%)

Query  62   LMMTC--FTRFIIVLSLLRQALGLQQTPPNRILIGIALSLTMLVMRPVWLN----IYDHA  115
            L++ C  F ++ + L + R+A+G+QQ PPN  L GIAL+ TM+VM PV  +    + DH 
Sbjct  7    LLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDH-  65

Query  116  VVPFE-NDQITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIG------GAKGNAADQDL  168
              P+E  +   L  +  T   PL+RFM  +TD   +A+++            ++A+ +DL
Sbjct  66   --PLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDL  123

Query  169  SIVVPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFV  228
             + +PA+VLSEL+++F+IGF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFV
Sbjct  124  LLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFV  183

Query  229  LIDGWSLTIGTL  240
            ++ GWS  +++L
Sbjct  184  MVSGWSRLLDSL  195

222) fliP in NC_011751


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  106 bits (384),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 81/192 (43%), Positives = 131/192 (69%), Gaps = 16/192 (8%)

Query  62   LMMTC--FTRFIIVLSLLRQALGLQQTPPNRILIGIALSLTMLVMRPVWLN----IYDHA  115
            L++ C  F ++ + L + R+A+G+QQ PPN  L GIAL+ TM+VM PV  +    + DH 
Sbjct  7    LLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDH-  65

Query  116  VVPFE-NDQITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIG------GAKGNAADQDL  168
              P+E  +   L  +  T   PL+RFM  +TD   +A+++            ++A+ +DL
Sbjct  66   --PLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDL  123

Query  169  SIVVPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFV  228
             + +PA+VLSEL+++F+IGF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFV
Sbjct  124  LLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFV  183

Query  229  LIDGWSLTIGTL  240
            ++ GWS  +++L
Sbjct  184  MVSGWSRLLDSL  195

223) lfiP in NC_017663


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  105 bits (382),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 80/192 (42%), Positives = 131/192 (69%), Gaps = 16/192 (8%)

Query  62   LMMTC--FARFIIVLSLLRQALGLQQTPPNRILIGIALSLTMLVMRPIWLN----IYDHA  115
            L++ C  F ++ + L + R+A+G+QQ PPN  L GIAL+ TM+VM P+  +    + DH 
Sbjct  7    LLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDH-  65

Query  116  VVPFE-NDQITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIG------GAKGNAADQDL  168
              P+E  +   L  +  T   PL+RFM  +TD   +A+++            ++A+ +DL
Sbjct  66   --PLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDL  123

Query  169  SIVVPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFV  228
             + +PA+VLSEL+++F+IGF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFV
Sbjct  124  LLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFV  183

Query  229  LIDGWSLTIGTL  240
            ++ GWS  +++L
Sbjct  184  MVSGWSRLLDSL  195

224) fliP in NC_016745


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  105 bits (382),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 74/183 (41%), Positives = 129/183 (71%), Gaps = 6/183 (3%)

Query  62   SFTRIIVVLAVLRQALGLQQSPPNRVLIGIALSLTLLIMRPVLQDIYHHAF-VPYDNGTI  120
            +F +I + L + R+A+G+QQ PPN  L GIAL+ T+++M PV +++ ++    P + G  
Sbjct  13   AFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGNT  72

Query  121  G-FEQALMTAKAPLQTFMLAQTRETDLEQILNIAQE--PTDLSPEEVPFEVL--IPAFVL  175
              ++ +  T   PLQ FM  +T    + ++L+ +Q   P +++ +    ++L  IPAFVL
Sbjct  73   EKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFVL  132

Query  176  SELKTAFQIGFMLFIPFLVIDLVVASVLMAMGMMMLSPLVISLPFKLMLFVLVDGWSMTV  235
            SEL+++F+IGF+++IPF+VIDL+V+++L+A+GM M+SP+ +SLP+KL+LFV+V GWS  +
Sbjct  133  SELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRLL  192

Query  236  GTL  238
            ++L
Sbjct  193  DSL  195

225) fliP1 in NC_017644


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  104 bits (377),  Expect = 5e-24, Method: Compositional matrix adjust.
 Identities = 79/192 (42%), Positives = 131/192 (69%), Gaps = 16/192 (8%)

Query  62   LMMTC--FTRFIIVLSLLRQALGLQQTPPNRILIGIALSLTLLVMRPIWLN----IYDHA  115
            L++ C  F ++ + L + R+A+G+QQ PPN  L GIAL+ T++VM P+  +    + DH 
Sbjct  7    LLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDH-  65

Query  116  VVPFE-NDQITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIG------GAKGNAADQDL  168
              P+E  +   L  +  T   PL+RFM  +TD   +A+++            ++A+ +DL
Sbjct  66   --PLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDL  123

Query  169  SIVVPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFV  228
             + +PA+VLSEL+++F+IGF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFV
Sbjct  124  LLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFV  183

Query  229  LIDGWSLTIGTL  240
            ++ GWS  +++L
Sbjct  184  MVSGWSRLLDSL  195

226) fliP in NC_012559


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  103 bits (373),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 82/199 (42%), Positives = 141/199 (71%), Gaps = 13/199 (6%)

Query  59   IPALLLMMTAFTRIVIVLSLLRQAIGLMQSPPNQVIVGLSLFLTLFVMAPV---FDQAYR  115
            IP LL++ TAF +I + L + R+AIG+ Q PPN  + G++L  T+FVMAPV    +Q  +
Sbjct  4    IPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVH  63

Query  116  EAWLPYSDSQMNFMQAAEKGV-QPFKGFMLKQTREKDLAFFVEIAREA-PPATPADVSLK  173
            +  L  ++++   +QA+ + V +P++ FM ++T    +A +++ ++   P   + + S +
Sbjct  64   DHPLELGNTEK--LQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKN  121

Query  174  TL---IPAFVVSELKTAFQIGFMVFIPFLIIDLVVASVLMAMGMMMVSPVIISLPFKLML  230
             L   IPAFV+SEL+++F+IGF+++IPF++IDL+V+++L+A+GM MVSP+ +SLP+KL+L
Sbjct  122  DLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLL  181

Query  231  FVLVDGWTLLIGSLVQSFY  249
            FV+V GW+ L++SL   FY
Sbjct  182  FVMVSGWSRLLDSL---FY  197

227) YE105_C3298 in NC_015224


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  103 bits (373),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 76/184 (42%), Positives = 132/184 (72%), Gaps = 8/184 (4%)

Query  74   TCFTRFIIVLAILRQALGLQQSPPNKVLTGIALALTLLVMRPVWTKVHQDAV-IPFQNDE  132
            T F ++ + L I R+A+G+QQ PPN  L GIALA T++VM PV   ++Q     P++ ++
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  133  ITLPQALARAEV-PLKNYMLAQTSTKSLDQMMDIAQ------VSGEPQQQDLTVVTPAYL  185
                QA AR+ + PL+ +M  +T    + +++D +Q      +++++ ++DL +  PA++
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  186  LSELKTAFQIGFMIYIPFLVIDLIVASILMAMGMMMLSPLIVSLPFKLMLFVLCDGWTLI  245
            LSEL+++F+IGF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFV+  GW+ +
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  246  VGTL  249
            +++L
Sbjct  192  LDSL  195

228) fliP in NC_009708


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  103 bits (374),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 75/184 (41%), Positives = 131/184 (72%), Gaps = 8/184 (4%)

Query  74   TCFTRFIIVLAILRQALGLQQSPPNKVLTGIALALTLLVMRPVWTKIHQDAV-IPFQQDE  132
            T F ++ + L I R+A+G+QQ PPN  L GIALA T++VM PV   ++Q     P++ ++
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  133  ITLSQALGRAEV-PLKNYMLAQTSTKSLDQMMAIAQ------VSGEPQQQDLSVVTPAYV  185
                QA +R+ + PL+ +M  +T    + +++  +Q      +++++ ++DL +  PA+V
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  186  LSELKTAFQIGFMIYIPFLVIDLIVASILMAMGMMMLSPLIVSLPFKLMLFVLCDGWTLM  245
            LSEL+++F+IGF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFV+  GW+ +
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  246  VGTL  249
            +++L
Sbjct  192  LDSL  195

229) fliP in NC_005363


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  103 bits (374),  Expect = 9e-24, Method: Compositional matrix adjust.
 Identities = 81/198 (41%), Positives = 139/198 (71%), Gaps = 12/198 (6%)

Query  59   LTLAPAILIMMTGFTRIIIVLSFLRQAMGVQQMPPNQLLVGLALFLTFFVMQPAFNEMNT  118
            ++L P +LI+ T+F +I + L + R+A+GVQQ+PPN  L G+AL  T FVM P  +EM+ 
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  119  N-GIQPYMAGTISQDQAIERT-FAPLRKFMFNQTRDSDLALFIKL-SKVEK--PKTRADV  173
                +P   G   + QA  RT + PL++FM   TR++D  +   L  + ++  PK  AD 
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFM---TRNTDPDVVAHLLDNTQRMWPKEMADQ  117

Query  174  PT----MVLVPAFVVSELKTAFQIGFIIFLPFLVIDIVAASVLMAMGMMMLPPVVISLPF  229
            ++    ++ +PAFV+SEL+++F+IGF+I++PF+VID++ +++L+A+GM M++P+ +SLP+
Sbjct  118  ASKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPL  177

Query  230  KIMLFVLVDGWGLLIGSM  247
            K++LFV+V GW+ L++S+
Sbjct  178  KLLLFVMVSGWSRLLDSL  195

230) fliP in NC_019567


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  103 bits (374),  Expect = 9e-24, Method: Compositional matrix adjust.
 Identities = 81/198 (41%), Positives = 139/198 (71%), Gaps = 12/198 (6%)

Query  59   LTLAPAILIMMTGFTRIIIVLSFLRQAMGVQQMPPNQLLVGLALFLTFFVMQPAFNEMNT  118
            ++L P +LI+ T+F +I + L + R+A+GVQQ+PPN  L G+AL  T FVM P  +EM+ 
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  119  N-GIQPYMAGTISQDQAIERT-FAPLRKFMFNQTRDSDLALFIKL-SKVEK--PKTRADV  173
                +P   G   + QA  RT + PL++FM   TR++D  +   L  + ++  PK  AD 
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFM---TRNTDPDVVAHLLDNTQRMWPKEMADQ  117

Query  174  PT----MVLVPAFVVSELKTAFQIGFIIFLPFLVIDIVAASVLMAMGMMMLPPVVISLPF  229
            ++    ++ +PAFV+SEL+++F+IGF+I++PF+VID++ +++L+A+GM M++P+ +SLP+
Sbjct  118  ASKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPL  177

Query  230  KIMLFVLVDGWGLLIGSM  247
            K++LFV+V GW+ L++S+
Sbjct  178  KLLLFVMVSGWSRLLDSL  195

231) Bmul_3754 in NC_010086


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  102 bits (370),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 84/198 (43%), Positives = 140/198 (71%), Gaps = 3/198 (1%)

Query  21   PFAALMVTSYTKLVVVLGLLRSALGVQQVPPNLVLNGIALILSLFIMAPVGMSIRDALQA  80
            PF  ++ T++ K+ + L + R+A+GVQQVPPN+ L GIAL  ++F+MAPV+  +++ ++ 
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  81   RHFDASGQLSTADVGALADAALPPIKDFLVSHTRQRDREFFVRTATSVWPKNRADGIKDD  140
            + ++ +   +T  + A A + + P++ F+  +T       ++  +  +WPK+ AD    +
Sbjct  65   HPLELG---NTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKN  121

Query  141  DLLVLVPSFTLAELTKAfqigfviyivfivvDLLVANILLALGMQMISPTTISVPFKLLL  200
            DLL+ +P+F L+EL  +F+IGF+IYI FIV+DL+V+N+LLALGMQM+SP T+S+P+KLLL
Sbjct  122  DLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLL  181

Query  201  FVALDGWSLLVHGLVLSY  218
            FV + GWS L+++L  SY
Sbjct  182  FVMVSGWSRLLDSLFYSY  199

232) yscR in NC_010805


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  102 bits (370),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 84/198 (43%), Positives = 140/198 (71%), Gaps = 3/198 (1%)

Query  21   PFAALMVTSYTKLVVVLGLLRSALGVQQVPPNLVLNGIALILSLFIMAPVGMSIRDALQA  80
            PF  ++ T++ K+ + L + R+A+GVQQVPPN+ L GIAL  ++F+MAPV+  +++ ++ 
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  81   RHFDASGQLSTADVGALADAALPPIKDFLVSHTRQRDREFFVRTATSVWPKNRADGIKDD  140
            + ++ +   +T  + A A + + P++ F+  +T       ++  +  +WPK+ AD    +
Sbjct  65   HPLELG---NTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKN  121

Query  141  DLLVLVPSFTLAELTKAfqigfviyivfivvDLLVANILLALGMQMISPTTISVPFKLLL  200
            DLL+ +P+F L+EL  +F+IGF+IYI FIV+DL+V+N+LLALGMQM+SP T+S+P+KLLL
Sbjct  122  DLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLL  181

Query  201  FVALDGWSLLVHGLVLSY  218
            FV + GWS L+++L  SY
Sbjct  182  FVMVSGWSRLLDSLFYSY  199

233) Cabther_B0538 in NC_016025


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  102 bits (369),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 88/205 (43%), Positives = 136/205 (67%), Gaps = 13/205 (6%)

Query  52   PFALIMMTSFVKISVVLSILRNALGTQQVPPNQVITGISLILTIFIMAPVAEKM---LEE  108
            PF LI+ T+F+KI++ L I RNA+G QQVPPN  + GI+L  T+F+MAPVA+ M   +++
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  109  AGLSDATAPVFTEMRADTLFKALDKGKEPLRAFLERNAHEADRRLFLGLAQRLAQKNGKD  168
              L  + +        + L  +     EPL+ F+ RN++      +L+ +QR+  K+  D
Sbjct  65   HPLELGNT--------EKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMAD  116

Query  169  PNAITVRDFRVVVPAFVTSQLTEAFQIGFLLFIPFLVIDMLVSNILQAMGMFMLSPTMIS  228
              +    D+ + +PAFV S+L  +F+IGFL++IPF+VID++VSN+L A+GM M+SP  +S
Sbjct  117  QASKN--DLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLS  174

Query  229  LPfklllfvlvkGWVTLIQNLVLSY  253
            LP+KLLLFV+V GW  L+++L  SY
Sbjct  175  LPLKLLLFVMVSGWSRLLDSLFYSY  199

234) Bcen_3526 in NC_008061


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  102 bits (370),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 83/198 (42%), Positives = 140/198 (71%), Gaps = 3/198 (1%)

Query  21   PFAALMVTSYTKLVVVLGLLRSALGIQQVPPNLVLNGIALILSLFIMAPVGMSIRDALQA  80
            PF  ++ T++ K+ + L + R+A+G+QQVPPN+ L GIAL  ++F+MAPV+  +++ ++ 
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  81   RHFDASGQLSTSDIGALADAALPPIKDFLVSHTRQRDREFFVRTATSVWPKNRADGIKDD  140
            + ++ +   +T  + A A + + P++ F+  +T       ++  +  +WPK+ AD    +
Sbjct  65   HPLELG---NTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKN  121

Query  141  DLLVLVPSFTLAELTKAfqigfviyivfivvDLLVANILLALGMQMISPTTISVPFKLLL  200
            DLL+ +P+F L+EL  +F+IGF+IYI FIV+DL+V+N+LLALGMQM+SP T+S+P+KLLL
Sbjct  122  DLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLL  181

Query  201  FVALDGWSLLVHGLVLSY  218
            FV + GWS L+++L  SY
Sbjct  182  FVMVSGWSRLLDSLFYSY  199

235) Bcen2424_4840 in NC_008543


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  102 bits (370),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 83/198 (42%), Positives = 140/198 (71%), Gaps = 3/198 (1%)

Query  21   PFAALMVTSYTKLVVVLGLLRSALGIQQVPPNLVLNGIALILSLFIMAPVGMSIRDALQA  80
            PF  ++ T++ K+ + L + R+A+G+QQVPPN+ L GIAL  ++F+MAPV+  +++ ++ 
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  81   RHFDASGQLSTSDIGALADAALPPIKDFLVSHTRQRDREFFVRTATSVWPKNRADGIKDD  140
            + ++ +   +T  + A A + + P++ F+  +T       ++  +  +WPK+ AD    +
Sbjct  65   HPLELG---NTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKN  121

Query  141  DLLVLVPSFTLAELTKAfqigfviyivfivvDLLVANILLALGMQMISPTTISVPFKLLL  200
            DLL+ +P+F L+EL  +F+IGF+IYI FIV+DL+V+N+LLALGMQM+SP T+S+P+KLLL
Sbjct  122  DLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLL  181

Query  201  FVALDGWSLLVHGLVLSY  218
            FV + GWS L+++L  SY
Sbjct  182  FVMVSGWSRLLDSLFYSY  199

236) bcscR in NC_011001


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  102 bits (370),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 83/198 (42%), Positives = 140/198 (71%), Gaps = 3/198 (1%)

Query  21   PFAALMVTSYTKLVVVLGLLRSALGIQQVPPNLVLNGIALILSLFIMAPVGMSIRDALQA  80
            PF  ++ T++ K+ + L + R+A+G+QQVPPN+ L GIAL  ++F+MAPV+  +++ ++ 
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  81   RHFDASGQLSTSDIGALADAALPPIKDFLVSHTRQRDREFFVRTATSVWPKNRADGIKDD  140
            + ++ +   +T  + A A + + P++ F+  +T       ++  +  +WPK+ AD    +
Sbjct  65   HPLELG---NTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKN  121

Query  141  DLLVLVPSFTLAELTKAfqigfviyivfivvDLLVANILLALGMQMISPTTISVPFKLLL  200
            DLL+ +P+F L+EL  +F+IGF+IYI FIV+DL+V+N+LLALGMQM+SP T+S+P+KLLL
Sbjct  122  DLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLL  181

Query  201  FVALDGWSLLVHGLVLSY  218
            FV + GWS L+++L  SY
Sbjct  182  FVMVSGWSRLLDSLFYSY  199

237) Bcenmc03_5444 in NC_010515


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  102 bits (370),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 83/198 (42%), Positives = 140/198 (71%), Gaps = 3/198 (1%)

Query  21   PFAALMVTSYTKLVVVLGLLRSALGIQQVPPNLVLNGIALILSLFIMAPVGMSIRDALQA  80
            PF  ++ T++ K+ + L + R+A+G+QQVPPN+ L GIAL  ++F+MAPV+  +++ ++ 
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  81   RHFDASGQLSTSDIGALADAALPPIKDFLVSHTRQRDREFFVRTATSVWPKNRADGIKDD  140
            + ++ +   +T  + A A + + P++ F+  +T       ++  +  +WPK+ AD    +
Sbjct  65   HPLELG---NTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKN  121

Query  141  DLLVLVPSFTLAELTKAfqigfviyivfivvDLLVANILLALGMQMISPTTISVPFKLLL  200
            DLL+ +P+F L+EL  +F+IGF+IYI FIV+DL+V+N+LLALGMQM+SP T+S+P+KLLL
Sbjct  122  DLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLL  181

Query  201  FVALDGWSLLVHGLVLSY  218
            FV + GWS L+++L  SY
Sbjct  182  FVMVSGWSRLLDSLFYSY  199

238) Bamb_4215 in NC_008391


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  101 bits (367),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 82/198 (42%), Positives = 139/198 (71%), Gaps = 3/198 (1%)

Query  21   PFAALMVTSYTKLVVVLGLLRSALGIQQVPPNLVLNGIALILSLFIMAPVGMSIRDALQS  80
            PF  ++ T++ K+ + L + R+A+G+QQVPPN+ L GIAL  ++F+MAPV+  +++ ++ 
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  81   RHFDASGQLSTSDIGVLADAALPPIKDFLVSHTRQRDREFFVRTATSVWPKNRADGIKDD  140
            + ++ +   +T  +   A + + P++ F+  +T       ++  +  +WPK+ AD    +
Sbjct  65   HPLELG---NTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKN  121

Query  141  DLLVLVPSFTLAELTKAfqigfviyivfivvDLLVANILLALGMQMISPTTISVPFKLLL  200
            DLL+ +P+F L+EL  +F+IGF+IYI FIV+DL+V+N+LLALGMQM+SP T+S+P+KLLL
Sbjct  122  DLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLL  181

Query  201  FVALDGWSLLVHGLVLSY  218
            FV + GWS L+++L  SY
Sbjct  182  FVMVSGWSRLLDSLFYSY  199

239) BamMC406_4737 in NC_010552


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  101 bits (367),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 82/198 (42%), Positives = 139/198 (71%), Gaps = 3/198 (1%)

Query  21   PFAALMVTSYTKLVVVLGLLRSALGIQQVPPNLVLNGIALILSLFIMAPVGMSIRDALQS  80
            PF  ++ T++ K+ + L + R+A+G+QQVPPN+ L GIAL  ++F+MAPV+  +++ ++ 
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  81   RHFDASGQLSTSDIGVLADAALPPIKDFLVSHTRQRDREFFVRTATSVWPKNRADGIKDD  140
            + ++ +   +T  +   A + + P++ F+  +T       ++  +  +WPK+ AD    +
Sbjct  65   HPLELG---NTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKN  121

Query  141  DLLVLVPSFTLAELTKAfqigfviyivfivvDLLVANILLALGMQMISPTTISVPFKLLL  200
            DLL+ +P+F L+EL  +F+IGF+IYI FIV+DL+V+N+LLALGMQM+SP T+S+P+KLLL
Sbjct  122  DLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLL  181

Query  201  FVALDGWSLLVHGLVLSY  218
            FV + GWS L+++L  SY
Sbjct  182  FVMVSGWSRLLDSLFYSY  199

240) MYA_4948 in NC_017921


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  101 bits (367),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 82/198 (42%), Positives = 139/198 (71%), Gaps = 3/198 (1%)

Query  21   PFAALMVTSYTKLVVVLGLLRSALGIQQVPPNLVLNGIALILSLFIMAPVGMSIRDALQA  80
            PF  ++ T++ K+ + L + R+A+G+QQVPPN+ L GIAL  ++F+MAPV+  +++ ++ 
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  81   RHFDAAGQLSTADIGVLADAALPPIKDFLVSHTRQRDREFFVRTATSVWPKNRADGIKDD  140
            + ++ +   +T  +   A + + P++ F+  +T       ++  +  +WPK+ AD    +
Sbjct  65   HPLELG---NTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKN  121

Query  141  DLLVLVPSFTLAELTKAfqigfviyivfivvDLLVANILLALGMQMISPTTISVPFKLLL  200
            DLL+ +P+F L+EL  +F+IGF+IYI FIV+DL+V+N+LLALGMQM+SP T+S+P+KLLL
Sbjct  122  DLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLL  181

Query  201  FVALDGWSLLVHGLVLSY  218
            FV + GWS L+++L  SY
Sbjct  182  FVMVSGWSRLLDSLFYSY  199

241) Bcep1808_5328 in NC_009255


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  101 bits (367),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 82/198 (42%), Positives = 139/198 (71%), Gaps = 3/198 (1%)

Query  21   PFAALMVTSYTKLVVVLGLLRSALGIQQVPPNLVLNGIALILSLFIMAPVGMSIRDALQA  80
            PF  ++ T++ K+ + L + R+A+G+QQVPPN+ L GIAL  ++F+MAPV+  +++ ++ 
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  81   RHFDAAGQLSTADIGVLADAALPPIKDFLVSHTRQRDREFFVRTATSVWPKNRADGIKDD  140
            + ++ +   +T  +   A + + P++ F+  +T       ++  +  +WPK+ AD    +
Sbjct  65   HPLELG---NTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKN  121

Query  141  DLLVLVPSFTLAELTKAfqigfviyivfivvDLLVANILLALGMQMISPTTISVPFKLLL  200
            DLL+ +P+F L+EL  +F+IGF+IYI FIV+DL+V+N+LLALGMQM+SP T+S+P+KLLL
Sbjct  122  DLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLL  181

Query  201  FVALDGWSLLVHGLVLSY  218
            FV + GWS L+++L  SY
Sbjct  182  FVMVSGWSRLLDSLFYSY  199

242) fliP in NC_017168


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  101 bits (366),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 74/184 (41%), Positives = 130/184 (71%), Gaps = 8/184 (4%)

Query  74   TCFTRFIIVLAILRQALGLQQSPPNKVLTGIALALTLLVMRPVWTKIHQDAV-IPFQQDE  132
            T F ++ + L I R+A+G+QQ PPN  L GIALA T++VM PV   ++Q     P++ ++
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  133  ITLSQALGRAE-APLKNYMLAQTSTKSLDQMMAIAQ------VSGEPQQQDLSVVTPAYV  185
                QA +R+   PL+ +M  +T    + +++  +Q      +++++ ++DL +  PA+V
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  186  LSELKTAFQMGFMIYIPFLVIDLIVASILMAMGMMMLSPLIVSLPFKLMLFVLCDGWTLM  245
            LSEL+++F++GF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFV+  GW+ +
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  246  VGTL  249
            +++L
Sbjct  192  LDSL  195

243) fliP in NC_010159


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  101 bits (366),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 74/184 (41%), Positives = 130/184 (71%), Gaps = 8/184 (4%)

Query  74   TCFTRFIIVLAILRQALGLQQSPPNKVLTGIALALTLLVMRPVWTKIHQDAV-IPFQQDE  132
            T F ++ + L I R+A+G+QQ PPN  L GIALA T++VM PV   ++Q     P++ ++
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  133  ITLSQALGRAE-APLKNYMLAQTSTKSLDQMMAIAQ------VSGEPQQQDLSVVTPAYV  185
                QA +R+   PL+ +M  +T    + +++  +Q      +++++ ++DL +  PA+V
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  186  LSELKTAFQMGFMIYIPFLVIDLIVASILMAMGMMMLSPLIVSLPFKLMLFVLCDGWTLM  245
            LSEL+++F++GF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFV+  GW+ +
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  246  VGTL  249
            +++L
Sbjct  192  LDSL  195

244) fliP in NC_008150


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  101 bits (366),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 74/184 (41%), Positives = 130/184 (71%), Gaps = 8/184 (4%)

Query  74   TCFTRFIIVLAILRQALGLQQSPPNKVLTGIALALTLLVMRPVWTKIHQDAV-IPFQQDE  132
            T F ++ + L I R+A+G+QQ PPN  L GIALA T++VM PV   ++Q     P++ ++
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  133  ITLSQALGRAE-APLKNYMLAQTSTKSLDQMMAIAQ------VSGEPQQQDLSVVTPAYV  185
                QA +R+   PL+ +M  +T    + +++  +Q      +++++ ++DL +  PA+V
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  186  LSELKTAFQMGFMIYIPFLVIDLIVASILMAMGMMMLSPLIVSLPFKLMLFVLCDGWTLM  245
            LSEL+++F++GF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFV+  GW+ +
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  246  VGTL  249
            +++L
Sbjct  192  LDSL  195

245) YPC_3863 in NC_017265


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  101 bits (366),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 74/184 (41%), Positives = 130/184 (71%), Gaps = 8/184 (4%)

Query  74   TCFTRFIIVLAILRQALGLQQSPPNKVLTGIALALTLLVMRPVWTKIHQDAV-IPFQQDE  132
            T F ++ + L I R+A+G+QQ PPN  L GIALA T++VM PV   ++Q     P++ ++
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  133  ITLSQALGRAE-APLKNYMLAQTSTKSLDQMMAIAQ------VSGEPQQQDLSVVTPAYV  185
                QA +R+   PL+ +M  +T    + +++  +Q      +++++ ++DL +  PA+V
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  186  LSELKTAFQMGFMIYIPFLVIDLIVASILMAMGMMMLSPLIVSLPFKLMLFVLCDGWTLM  245
            LSEL+++F++GF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFV+  GW+ +
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  246  VGTL  249
            +++L
Sbjct  192  LDSL  195

246) fliP in NC_005810


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  101 bits (366),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 74/184 (41%), Positives = 130/184 (71%), Gaps = 8/184 (4%)

Query  74   TCFTRFIIVLAILRQALGLQQSPPNKVLTGIALALTLLVMRPVWTKIHQDAV-IPFQQDE  132
            T F ++ + L I R+A+G+QQ PPN  L GIALA T++VM PV   ++Q     P++ ++
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  133  ITLSQALGRAE-APLKNYMLAQTSTKSLDQMMAIAQ------VSGEPQQQDLSVVTPAYV  185
                QA +R+   PL+ +M  +T    + +++  +Q      +++++ ++DL +  PA+V
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  186  LSELKTAFQMGFMIYIPFLVIDLIVASILMAMGMMMLSPLIVSLPFKLMLFVLCDGWTLM  245
            LSEL+++F++GF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFV+  GW+ +
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  246  VGTL  249
            +++L
Sbjct  192  LDSL  195

247) fliP in NC_003143


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  101 bits (366),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 74/184 (41%), Positives = 130/184 (71%), Gaps = 8/184 (4%)

Query  74   TCFTRFIIVLAILRQALGLQQSPPNKVLTGIALALTLLVMRPVWTKIHQDAV-IPFQQDE  132
            T F ++ + L I R+A+G+QQ PPN  L GIALA T++VM PV   ++Q     P++ ++
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  133  ITLSQALGRAE-APLKNYMLAQTSTKSLDQMMAIAQ------VSGEPQQQDLSVVTPAYV  185
                QA +R+   PL+ +M  +T    + +++  +Q      +++++ ++DL +  PA+V
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  186  LSELKTAFQMGFMIYIPFLVIDLIVASILMAMGMMMLSPLIVSLPFKLMLFVLCDGWTLM  245
            LSEL+++F++GF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFV+  GW+ +
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  246  VGTL  249
            +++L
Sbjct  192  LDSL  195

248) fliP in NC_017154


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  101 bits (366),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 74/184 (41%), Positives = 130/184 (71%), Gaps = 8/184 (4%)

Query  74   TCFTRFIIVLAILRQALGLQQSPPNKVLTGIALALTLLVMRPVWTKIHQDAV-IPFQQDE  132
            T F ++ + L I R+A+G+QQ PPN  L GIALA T++VM PV   ++Q     P++ ++
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  133  ITLSQALGRAE-APLKNYMLAQTSTKSLDQMMAIAQ------VSGEPQQQDLSVVTPAYV  185
                QA +R+   PL+ +M  +T    + +++  +Q      +++++ ++DL +  PA+V
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  186  LSELKTAFQMGFMIYIPFLVIDLIVASILMAMGMMMLSPLIVSLPFKLMLFVLCDGWTLM  245
            LSEL+++F++GF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFV+  GW+ +
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  246  VGTL  249
            +++L
Sbjct  192  LDSL  195

249) fliP in NC_017160


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  101 bits (366),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 74/184 (41%), Positives = 130/184 (71%), Gaps = 8/184 (4%)

Query  74   TCFTRFIIVLAILRQALGLQQSPPNKVLTGIALALTLLVMRPVWTKIHQDAV-IPFQQDE  132
            T F ++ + L I R+A+G+QQ PPN  L GIALA T++VM PV   ++Q     P++ ++
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  133  ITLSQALGRAE-APLKNYMLAQTSTKSLDQMMAIAQ------VSGEPQQQDLSVVTPAYV  185
                QA +R+   PL+ +M  +T    + +++  +Q      +++++ ++DL +  PA+V
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  186  LSELKTAFQMGFMIYIPFLVIDLIVASILMAMGMMMLSPLIVSLPFKLMLFVLCDGWTLM  245
            LSEL+++F++GF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFV+  GW+ +
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  246  VGTL  249
            +++L
Sbjct  192  LDSL  195

250) fliP in NC_004088


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  101 bits (366),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 74/184 (41%), Positives = 130/184 (71%), Gaps = 8/184 (4%)

Query  74   TCFTRFIIVLAILRQALGLQQSPPNKVLTGIALALTLLVMRPVWTKIHQDAV-IPFQQDE  132
            T F ++ + L I R+A+G+QQ PPN  L GIALA T++VM PV   ++Q     P++ ++
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  133  ITLSQALGRAE-APLKNYMLAQTSTKSLDQMMAIAQ------VSGEPQQQDLSVVTPAYV  185
                QA +R+   PL+ +M  +T    + +++  +Q      +++++ ++DL +  PA+V
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  186  LSELKTAFQMGFMIYIPFLVIDLIVASILMAMGMMMLSPLIVSLPFKLMLFVLCDGWTLM  245
            LSEL+++F++GF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFV+  GW+ +
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  246  VGTL  249
            +++L
Sbjct  192  LDSL  195

251) fliP in NC_008149


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  101 bits (366),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 74/184 (41%), Positives = 130/184 (71%), Gaps = 8/184 (4%)

Query  74   TCFTRFIIVLAILRQALGLQQSPPNKVLTGIALALTLLVMRPVWTKIHQDAV-IPFQQDE  132
            T F ++ + L I R+A+G+QQ PPN  L GIALA T++VM PV   ++Q     P++ ++
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  133  ITLSQALGRAE-APLKNYMLAQTSTKSLDQMMAIAQ------VSGEPQQQDLSVVTPAYV  185
                QA +R+   PL+ +M  +T    + +++  +Q      +++++ ++DL +  PA+V
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  186  LSELKTAFQMGFMIYIPFLVIDLIVASILMAMGMMMLSPLIVSLPFKLMLFVLCDGWTLM  245
            LSEL+++F++GF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFV+  GW+ +
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  246  VGTL  249
            +++L
Sbjct  192  LDSL  195

252) fliP in NC_009381


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  101 bits (366),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 74/184 (41%), Positives = 130/184 (71%), Gaps = 8/184 (4%)

Query  74   TCFTRFIIVLAILRQALGLQQSPPNKVLTGIALALTLLVMRPVWTKIHQDAV-IPFQQDE  132
            T F ++ + L I R+A+G+QQ PPN  L GIALA T++VM PV   ++Q     P++ ++
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  133  ITLSQALGRAE-APLKNYMLAQTSTKSLDQMMAIAQ------VSGEPQQQDLSVVTPAYV  185
                QA +R+   PL+ +M  +T    + +++  +Q      +++++ ++DL +  PA+V
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  186  LSELKTAFQMGFMIYIPFLVIDLIVASILMAMGMMMLSPLIVSLPFKLMLFVLCDGWTLM  245
            LSEL+++F++GF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFV+  GW+ +
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  246  VGTL  249
            +++L
Sbjct  192  LDSL  195

253) fliP in NC_014029


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  101 bits (366),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 74/184 (41%), Positives = 130/184 (71%), Gaps = 8/184 (4%)

Query  74   TCFTRFIIVLAILRQALGLQQSPPNKVLTGIALALTLLVMRPVWTKIHQDAV-IPFQQDE  132
            T F ++ + L I R+A+G+QQ PPN  L GIALA T++VM PV   ++Q     P++ ++
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  133  ITLSQALGRAE-APLKNYMLAQTSTKSLDQMMAIAQ------VSGEPQQQDLSVVTPAYV  185
                QA +R+   PL+ +M  +T    + +++  +Q      +++++ ++DL +  PA+V
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  186  LSELKTAFQMGFMIYIPFLVIDLIVASILMAMGMMMLSPLIVSLPFKLMLFVLCDGWTLM  245
            LSEL+++F++GF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFV+  GW+ +
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  246  VGTL  249
            +++L
Sbjct  192  LDSL  195

254) fliP in NC_006155


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  101 bits (366),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 74/184 (41%), Positives = 130/184 (71%), Gaps = 8/184 (4%)

Query  74   TCFTRFIIVLAILRQALGLQQSPPNKVLTGIALALTLLVMRPVWTKIHQDAV-IPFQQDE  132
            T F ++ + L I R+A+G+QQ PPN  L GIALA T++VM PV   ++Q     P++ ++
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  133  ITLSQALGRAE-APLKNYMLAQTSTKSLDQMMAIAQ------VSGEPQQQDLSVVTPAYV  185
                QA +R+   PL+ +M  +T    + +++  +Q      +++++ ++DL +  PA+V
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  186  LSELKTAFQMGFMIYIPFLVIDLIVASILMAMGMMMLSPLIVSLPFKLMLFVLCDGWTLM  245
            LSEL+++F++GF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFV+  GW+ +
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  246  VGTL  249
            +++L
Sbjct  192  LDSL  195

255) fliP in NC_010634


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  101 bits (366),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 74/184 (41%), Positives = 130/184 (71%), Gaps = 8/184 (4%)

Query  74   TCFTRFIIVLAILRQALGLQQSPPNKVLTGIALALTLLVMRPVWTKIHQDAV-IPFQQDE  132
            T F ++ + L I R+A+G+QQ PPN  L GIALA T++VM PV   ++Q     P++ ++
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  133  ITLSQALGRAE-APLKNYMLAQTSTKSLDQMMAIAQ------VSGEPQQQDLSVVTPAYV  185
                QA +R+   PL+ +M  +T    + +++  +Q      +++++ ++DL +  PA+V
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  186  LSELKTAFQMGFMIYIPFLVIDLIVASILMAMGMMMLSPLIVSLPFKLMLFVLCDGWTLM  245
            LSEL+++F++GF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFV+  GW+ +
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  246  VGTL  249
            +++L
Sbjct  192  LDSL  195

256) fliP in NC_010465


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  101 bits (366),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 74/184 (41%), Positives = 130/184 (71%), Gaps = 8/184 (4%)

Query  74   TCFTRFIIVLAILRQALGLQQSPPNKVLTGIALALTLLVMRPVWTKIHQDAV-IPFQQDE  132
            T F ++ + L I R+A+G+QQ PPN  L GIALA T++VM PV   ++Q     P++ ++
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  133  ITLSQALGRAE-APLKNYMLAQTSTKSLDQMMAIAQ------VSGEPQQQDLSVVTPAYV  185
                QA +R+   PL+ +M  +T    + +++  +Q      +++++ ++DL +  PA+V
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  186  LSELKTAFQMGFMIYIPFLVIDLIVASILMAMGMMMLSPLIVSLPFKLMLFVLCDGWTLM  245
            LSEL+++F++GF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFV+  GW+ +
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  246  VGTL  249
            +++L
Sbjct  192  LDSL  195

257) Cwoe_0066 in NC_013739


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =  100 bits (363),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 83/193 (44%), Positives = 129/193 (67%), Gaps = 12/193 (6%)

Query  28   CLTGFTRILIVLGFIRTAIGTPTAPPNQVLVGIALFLTLFVMAPTFTQIKETAWD-PLEA  86
            C T+F +I + L + R AIG    PPN  L GIAL  T+FVMAP   ++++   D PLE 
Sbjct  11   C-TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLEL  69

Query  87   GRINTAQAVRRAE-EPLRQFMFEQTRTKDLALFVRLSRTREQ--PRTRADIPTT----VL  139
            G  +  QA  R+  EPL++FM   TR  D  +  +L    ++  P+  AD ++     + 
Sbjct  70   GNTEKLQASARTVIEPLQRFM---TRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLA  126

Query  140  IPAFIVSELKTAFQIGFMIFLPFLVIDLIVASTLMSMGMIMLPPVFISLPFKILLFVLVD  199
            IPAF++SEL+++F+IGF+I++PF+VIDLIV++ L+++GM M++P+ +SLP+K+LLFV+V 
Sbjct  127  IPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVS  186

Query  200  GWALITDSLVRSF  212
            GW+ + DSL  S+
Sbjct  187  GWSRLLDSLFYSY  199

258) Tmar_0992 in NC_014831


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score =   99 bits (360),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 80/190 (43%), Positives = 133/190 (70%), Gaps = 10/190 (5%)

Query  42   TGFTRIVVALSFLRSALGTQQAPPNQVLVGLALFLTVFVMAPVWQQVYQDAWVPYRDGQI  101
            T+F +I ++L + R+A+G QQ PPN  L G+AL  T+FVMAPV +++  + +V  +  ++
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEM--QQRVHDHPLEL  69

Query  102  GQVEALQRAQ----QPVREFMFRYTRERDLALFLELSGRG-PVESRDQVPTYVL---IPA  153
            G+ E LQ +     +P++ FM R T    +A +L+ + R  P E  DQ +   L   IPA
Sbjct  70   GNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPA  129

Query  154  FAISELKTAFQIGFILYVPFLVIDMVVASTLMSMGMLMVPPMLVSLPFKILLFVLVDGWN  213
            F +SEL+++F+IGF++Y+PF+VID++V++ L+++GM MV+PM +SLP+K+LLFV+V GW+
Sbjct  130  FVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWS  189

Query  214  LVVRSLLASF  223
             ++ SL+ S+
Sbjct  190  RLLDSLFYSY  199

259) fliP in NC_013216


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 98.3 bits (354),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 75/186 (41%), Positives = 126/186 (68%), Gaps = 10/186 (5%)

Query  67   PAILLMMTSFTRIVIVLSFLRNALGTQQTPPNQVLIGLALFLTVFIMKPVYNDL----NE  122
            P +L++ T+F +I + L + RNA+G QQ PPN  L G+AL  T+F+M PV +++    ++
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  123  QALKPYLANQITQEEAQNRAAGPLKEFMLKQTRESDLALFIGVAKAQKPQNRNDVP----  178
            ++L   L+N    + +      PL+ FM ++T    +A +++ ++   P++  D +    
Sbjct  65   HPLE--LGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKND  122

Query  179  LHLVIPAFIISELKTSFQMGFLIYIPFLVIDAVVASTLMSMGMFMLPPAMFSLPFKLLLF  238
            L L IPAF++SEL+++F++GFLIYIPF+VID +V++ L+++GM M++P  +SLP+KLLLF
Sbjct  123  LLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLF  182

Query  239  VMVDGW  244
            VMV GW
Sbjct  183  VMVSGW  188

260) fliP in NC_005126


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 97.3 bits (350),  Expect = 7e-22, Method: Compositional matrix adjust.
 Identities = 84/204 (42%), Positives = 133/204 (66%), Gaps = 15/204 (7%)

Query  50   LTFIPAALLMMTSFTRIIIVLGLLRNALGTPSAPPNQVLLGLALFMTFFIMSPVFDKVYQ  109
            +++IP  L++ T+F +I + L + RNA+G    PPN  L G+AL  T F+M+PV + + Q
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  110  DAY-LPFS-EDKISLETALENGAKPLRQFMLRQTRENDLALFARLADQP----PFETADS  163
                 P+   +   L+++      PL++FM   TR+ D  + A+L D+     P E AD 
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFM---TRNTDPDVVAHLLDNTQRMWPKEMADQ  117

Query  164  VPMRVLM---PAFITSELKTAFQIGFTLFIPFLIIDLVVASVLMALGMMMVPPATISLPF  220
             +   L+   PAF+ SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P T+SLP+
Sbjct  118  ASKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPL  177

Query  221  KLMLFVLVDGWQLLLGSLAQSFYG  244
            KL+LFV+V GW  LL+SL   FY+
Sbjct  178  KLLLFVMVSGWSRLLDSL---FYS  198

261) fliP in NC_012962


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 97.0 bits (349),  Expect = 8e-22, Method: Compositional matrix adjust.
 Identities = 84/205 (41%), Positives = 134/205 (66%), Gaps = 17/205 (8%)

Query  57   LGFIPAALLMMTSFTRIIIVLGLLRNALGTPSAPPNQVLLGLALFMTFFIMSPVFDKVYQ  116
            +++IP  L++ T+F +I + L + RNA+G    PPN  L G+AL  T F+M+PV + + Q
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  117  DAY---LPFSEDKISLETALENGAKPLRQFMLRQTRENDLALFARLADQP----PFETAD  169
                  L +++    L+++      PL++FM   TR+ D  + A+L D+     P E AD
Sbjct  61   RVHDHPLELGNTE-KLQASARTVIEPLQRFM---TRNTDPDVVAHLLDNTQRMWPKEMAD  116

Query  170  SVPMRVLM---PAFITSELKTAFQIGFTLFIPFLIIDLVVASVLMALGMMMVPPATISLP  226
              +   L+   PAF+ SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P T+SLP
Sbjct  117  QASKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLP  176

Query  227  FKLMLFVLVDGWQLLLGSLAQSFYG  251
            +KL+LFV+V GW  LL+SL   FY+
Sbjct  177  LKLLLFVMVSGWSRLLDSL---FYS  198

262) fliP in NC_007712


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 96.8 bits (348),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 82/202 (41%), Positives = 131/202 (65%), Gaps = 11/202 (5%)

Query  59   LTFIPAALLMMTSFTRIIIVLGLLRSAIGTPSAPPNQVLLGLALFLTFFVMSPV---LDS  115
            +++IP  L++ T+F +I + L + R+AIG    PPN  L G+AL  T FVM+PV   ++ 
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  116  IYTEAYLPLSENKISMQTALERGSQPLRAFMLRQTREADLG-LFARLANVPPLEGPEAVP  174
               +  L L++    +Q++     +PL+ FM R+T    ++ L+     + P E ++  +
Sbjct  61   RVHDHPLELGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQAS  119

Query  175  MRILL---PAYVTSELKTAFQIGFTLFIPFLIIDLVVASVLMALGMMMVPPATISLPFKL  231
               LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P T+SLP+KL
Sbjct  120  KNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKL  179

Query  232  MLFVLVDGWQLLLSSLAQSFYS  253
            +LFV+V GW  LL SL   FYS
Sbjct  180  LLFVMVSGWSRLLDSL---FYS  198

263) fliP in NC_014228


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 96.2 bits (346),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 81/200 (41%), Positives = 131/200 (66%), Gaps = 9/200 (4%)

Query  78   LGFIPAALLMMTSFTRIIIVLGLLRNALGTPSAPPNQVMLGLALFMTFFIMAPVFDKVYQ  137
            +++IP  L++ T+F +I + L + RNA+G    PPN  + G+AL  T F+MAPV + + Q
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  138  DAY-LPYN-EDKITLEAALDKGSKPLRQFMLRQTRENDLALF----ARLADQEAFETADS  191
                 P +  +   L+A+      PL++FM R+T  + +A +     R+  +E  + A  
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  192  VPLRVLVPAFITSELKTAFQIGFTLFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLM  251
              L + +PAF+ SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P T+SLP+KL+
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  252  LFVLVDGWQLLLGSLAQSFY  271
            LFV+V GW  LL+SL   FY
Sbjct  181  LFVMVSGWSRLLDSL---FY  197

264) fliP in NC_007963


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 96.0 bits (345),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 80/194 (42%), Positives = 127/194 (66%), Gaps = 19/194 (9%)

Query  66   TCFTRIIIVLSLLRTAIGTQSTPPNQVLLGLALFMTFFIMSPV----LDRVHEQAWVPFS  121
            T F +I + L + R AIG Q  PPN  L G+AL  T F+M+PV     +RVH+++    +
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  122  EERISLEQALEQGSQPFREFMFGQTRETDLALFARMADADE----MQGPEDVPMR---LL  174
             E+  L+ +     +P++ FM   TR+TD  + A++ D  +     + +++ +     L 
Sbjct  72   TEK--LQASARTVIEPLQRFM---TRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLA  126

Query  175  IPAFLTSELKTAFQIGFSIFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLMLFVLVD  234
            IPAF+ SEL+++F+IGF I+IPF++IDL+V+++L+ALGM MV+P T+SLP+KL+LFV+V 
Sbjct  127  IPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVS  186

Query  235  GWQLLIGSLAESFY  248
            GW  L++SL   FY
Sbjct  187  GWSRLLDSL---FY  197

265) fliP in NC_021191


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 96.0 bits (345),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 82/200 (41%), Positives = 142/200 (71%), Gaps = 8/200 (4%)

Query  83   LSVAPAVLLLCTCFTKVFMVLGITRNAMGLTSMPPNQVLAGLALFISLFIMAPVLSQVNE  142
            +S+ P +L++CT F K+ M L ITRNA+G+  +PPN  L G+AL  ++F+MAPV  ++++
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  143  QGVQPYLA---GDKTQSQAFKDGVQPLRDFMAKSTREDELQLLI----RVSGQQKPANIS  195
            +  +  L     +K Q+ A +  ++PL+ FM+++T  D +  L+    R+  ++ + + S
Sbjct  61   RVHDHPLELGNTEKLQASA-RTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQAS  119

Query  196  DVELTTLVPAFVLSELRAAFIIGFVIFIPFLIIDmvvsaslmslgmmmlppvTVAMPFKL  255
              +L   +PAFVLSEL+A+F IGF+I+IPF++ID++VS  L++LGM M++P+T+++P+KL
Sbjct  120  KNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKL  179

Query  256  LLFVLVNGWGLIITALVGSY  275
            LLFV+V+GW+ ++ +L  SY
Sbjct  180  LLFVMVSGWSRLLDSLFYSY  199

266) fliP in NC_007348


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 95.7 bits (344),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 80/195 (42%), Positives = 127/195 (66%), Gaps = 18/195 (9%)

Query  82   TGFTRIVIVLGLLRNALGTASSPPNQVLVGLSLFLTFFVMSPV----LDRVYNDAYKPLS  137
            T+F +I + L + RNA+G    PPN  L G++L  T FVM+PV     +RV ++   PL 
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDH---PLE  68

Query  138  -ENRISLETAMAKAAEPLKGFMLKQTREKDLAMFAQMAKAPE----MQGPEEVPMSIL--  190
              N   L+++     EPL+ FM   TR+ D  + A++    +     + +++ + + L  
Sbjct  69   LGNTEKLQASARTVIEPLQRFM---TRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLL  125

Query  191  -VPAFVTSELKTAFQIGFTIFIPFLIIDLVVASVLMAMGMMMVPPATISLPFKLMLFVLV  249
             +PAFV SEL+++F+IGF I+IPF++IDL+V+++L+A+GM MV+P T+SLP+KL+LFV+V
Sbjct  126  AIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMV  185

Query  250  DGWQLLLGSLAQSFM  264
             GW  LL+SL  S+M
Sbjct  186  SGWSRLLDSLFYSYM  200

267) SerAS12_3042 in NC_015566


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 95.2 bits (342),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 83/205 (41%), Positives = 135/205 (66%), Gaps = 17/205 (8%)

Query  47   LSFLPAMLLMMTSFTRIIIVLGLLRNALGTPSAPPNQVMLGLALFLTFFIMSPVFDKVYQ  106
            +S++P +L++ T+F +I + L + RNA+G    PPN  + G+AL  T F+M+PV + + Q
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  107  DAY---LPFSQDKISLDAALDKGSQPLREFMLRQTRETDLALYARLANQP----PLAGPE  159
                  L +++    L+A+     +PL+ FM   TR+TD  + A+L ++     P   ++
Sbjct  61   RVHDHPLELGNTE-KLQASARTVIEPLQRFM---TRNTDPDVVAHLLDNTQRMWPKEMAD  116

Query  160  AVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATISLP  216
              +   LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P T+SLP
Sbjct  117  QASKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLP  176

Query  217  FKLMLFVLVDGWQLLLGSLAQSFYS  241
            +KL+LFV+V GW  LL+SL   FYS
Sbjct  177  LKLLLFVMVSGWSRLLDSL---FYS  198

268) SerAS13_3044 in NC_017573


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 95.2 bits (342),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 83/205 (41%), Positives = 135/205 (66%), Gaps = 17/205 (8%)

Query  47   LSFLPAMLLMMTSFTRIIIVLGLLRNALGTPSAPPNQVMLGLALFLTFFIMSPVFDKVYQ  106
            +S++P +L++ T+F +I + L + RNA+G    PPN  + G+AL  T F+M+PV + + Q
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  107  DAY---LPFSQDKISLDAALDKGSQPLREFMLRQTRETDLALYARLANQP----PLAGPE  159
                  L +++    L+A+     +PL+ FM   TR+TD  + A+L ++     P   ++
Sbjct  61   RVHDHPLELGNTE-KLQASARTVIEPLQRFM---TRNTDPDVVAHLLDNTQRMWPKEMAD  116

Query  160  AVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATISLP  216
              +   LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P T+SLP
Sbjct  117  QASKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLP  176

Query  217  FKLMLFVLVDGWQLLLGSLAQSFYS  241
            +KL+LFV+V GW  LL+SL   FYS
Sbjct  177  LKLLLFVMVSGWSRLLDSL---FYS  198

269) fliP in NC_021591


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 95.2 bits (342),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 83/205 (41%), Positives = 135/205 (66%), Gaps = 17/205 (8%)

Query  47   LSFLPAMLLMMTSFTRIIIVLGLLRNALGTPSAPPNQVMLGLALFLTFFIMSPVFDKVYQ  106
            +S++P +L++ T+F +I + L + RNA+G    PPN  + G+AL  T F+M+PV + + Q
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  107  DAY---LPFSQDKISLDAALDKGSQPLREFMLRQTRETDLALYARLANQP----PLAGPE  159
                  L +++    L+A+     +PL+ FM   TR+TD  + A+L ++     P   ++
Sbjct  61   RVHDHPLELGNTE-KLQASARTVIEPLQRFM---TRNTDPDVVAHLLDNTQRMWPKEMAD  116

Query  160  AVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATISLP  216
              +   LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P T+SLP
Sbjct  117  QASKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLP  176

Query  217  FKLMLFVLVDGWQLLLGSLAQSFYS  241
            +KL+LFV+V GW  LL+SL   FYS
Sbjct  177  LKLLLFVMVSGWSRLLDSL---FYS  198

270) SerAS9_3041 in NC_015567


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 95.2 bits (342),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 83/205 (41%), Positives = 135/205 (66%), Gaps = 17/205 (8%)

Query  47   LSFLPAMLLMMTSFTRIIIVLGLLRNALGTPSAPPNQVMLGLALFLTFFIMSPVFDKVYQ  106
            +S++P +L++ T+F +I + L + RNA+G    PPN  + G+AL  T F+M+PV + + Q
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  107  DAY---LPFSQDKISLDAALDKGSQPLREFMLRQTRETDLALYARLANQP----PLAGPE  159
                  L +++    L+A+     +PL+ FM   TR+TD  + A+L ++     P   ++
Sbjct  61   RVHDHPLELGNTE-KLQASARTVIEPLQRFM---TRNTDPDVVAHLLDNTQRMWPKEMAD  116

Query  160  AVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATISLP  216
              +   LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P T+SLP
Sbjct  117  QASKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLP  176

Query  217  FKLMLFVLVDGWQLLLGSLAQSFYS  241
            +KL+LFV+V GW  LL+SL   FYS
Sbjct  177  LKLLLFVMVSGWSRLLDSL---FYS  198

271) fliP in NC_021659


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 95.2 bits (342),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 83/205 (41%), Positives = 135/205 (66%), Gaps = 17/205 (8%)

Query  47   LSFLPAMLLMMTSFTRIIIVLGLLRNALGTPSAPPNQVMLGLALFLTFFIMSPVFDKVYQ  106
            +S++P +L++ T+F +I + L + RNA+G    PPN  + G+AL  T F+M+PV + + Q
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  107  DAY---LPFSQDKISLDAALDKGSQPLREFMLRQTRETDLALYARLANQP----PLAGPE  159
                  L +++    L+A+     +PL+ FM   TR+TD  + A+L ++     P   ++
Sbjct  61   RVHDHPLELGNTE-KLQASARTVIEPLQRFM---TRNTDPDVVAHLLDNTQRMWPKEMAD  116

Query  160  AVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATISLP  216
              +   LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P T+SLP
Sbjct  117  QASKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLP  176

Query  217  FKLMLFVLVDGWQLLLGSLAQSFYS  241
            +KL+LFV+V GW  LL+SL   FYS
Sbjct  177  LKLLLFVMVSGWSRLLDSL---FYS  198

272) fliP in NC_010645


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 94.9 bits (341),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 79/196 (41%), Positives = 129/196 (66%), Gaps = 15/196 (7%)

Query  68   LLMMTGFTRIIIVLGLLRSAMGTAMSPPNHVLVGIALFLTFYTMSPVFDKIYTEAY-QPL  126
            L++ T+F +I + L + R+A+G    PPN  L GIAL  T + M+PV + +      +PL
Sbjct  8    LIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPL  67

Query  127  STGSIP-FETALERAGAPLHTFMLHQTRENDLALFANL-ANIPKI------EDPSKVPMR  178
              G+   ++++      PL+ FM   TR+ D  + A+L  N  ++      +++SK  + 
Sbjct  68   ELGNTEKLQASARTVIEPLQRFM---TRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLL  124

Query  179  ILIPAFITSELKTAFQIGFTIFIPFLIIDLVVASVLMALGMMMVPPVTVSLPFKLMLFVL  238
            + IPAF+ SEL+++F+IGF I+IPF++IDL+V+++L+ALGM MV+P+T+SLP+KL+LFV+
Sbjct  125  LAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVM  184

Query  239  ADGWNLLLGSLAKSFY  254
              GW+ LL+SL   FY
Sbjct  185  VSGWSRLLDSL---FY  197

273) fliP in NC_018645


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 94.4 bits (339),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 78/189 (42%), Positives = 129/189 (69%), Gaps = 8/189 (4%)

Query  56   LALAPAILILMTPFTRLIVVFHFLRQAIGTQSSPPNQVIVGLALFMTFFIIKPVAQEIYQ  115
            ++L P +LI+ T+F ++ + + + R+AIG Q  PPN  + G+AL  T F++ PVA+E+ Q
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  116  QSLNPYLEREITYEKAFESAQV---PIRKFLLLNTRESDIALFVKGADMKKPETRDDVS-  171
            +  +  LE   T EK   SA+    P+++F+  NT    +A ++  ++   P    D + 
Sbjct  61   RVHDHPLELGNT-EKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQAS  119

Query  172  ---LLVLIPAYVISELKTAFIIGFVLYIPFIVIDMVVASVLLAMGMMMLPPVMISLPFKL  228
               LL+ IPA+V+SEL+++F IGF++YIPFIVID++V+++LLA+GM M++P+ +SLP+KL
Sbjct  120  KNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKL  179

Query  229  MLFVLVDGW  237
            +LFV+V GW
Sbjct  180  LLFVMVSGW  188

274) Clole_2443 in NC_015275


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 93.9 bits (337),  Expect = 8e-21, Method: Compositional matrix adjust.
 Identities = 83/199 (42%), Positives = 138/199 (70%), Gaps = 2/199 (1%)

Query  64   ISLAPSILIMMTSFLRIIIALHFVRSAIGTQTMPPNQILVGLALFLTFFVMSPVFMQIKT  123
            +SL P +LI+ T+FL+I ++L + R+AIG Q +PPN  L G+AL  T FVM+PV  +++ 
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  124  NAID-PLEKQQITQEQAIERG-IQPLKEFMLKQTRDEDITLFMDLAHLEPYTEDTDLVKE  181
               D PLE  +  + QA  R  I+PL+ FM ++T  + ++ ++D ++     E +D    
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  182  MPLHVIIPAFIISELRAGFIIGFLVYIPFIIIDMVVaatlmsmgmmmlppamISLPFKVL  241
              L + IPAF++SEL+AGF IGFL+YIPFI+ID++V+  L+++GM M++P  +SLP+K+L
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  242  LFILVDGWNLFIGQLIQTF  260
            LF++V GW+ +++ L+ ++
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

275) fliP in NC_015856


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 93.3 bits (335),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 79/193 (41%), Positives = 125/193 (65%), Gaps = 15/193 (7%)

Query  70   TSFTRIIIVLGLLRTAIGAQSSPPNQILVGLALFLTFFVMSPVFDKAYSDAYK-PFSDNK  128
            T+F +I + L + R AIG Q  PPN  L G+AL  T FVM+PV +         P+   +
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  129  ISAEQALERG-IQPFKQFMLKQTREGDLALFARLAQAPQMQGPEEVP-------LRILVP  180
                QA  R  I+P+++FM   TR+ D  + A+L +  Q   P E++       L + +P
Sbjct  72   TEKLQASARTVIEPLQRFM---TRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIP  128

Query  181  AFVISELKTAFQIGFTIFIPFLIVDLVVASVLMSMGMMMVPPATISLPFKLMLFVLVDGW  240
            AFV+SEL+++F+IGF I+IPF+++DL+V+++L+++GM MV+P T+SLP+KL+LFV+V GW
Sbjct  129  AFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGW  188

Query  241  QLLIGALAQSFYT  253
              L+++L   FY+
Sbjct  189  SRLLDSL---FYS  198

276) fliP in NC_014532


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 93.3 bits (335),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 78/192 (41%), Positives = 123/192 (65%), Gaps = 15/192 (7%)

Query  90   TSFTRIIIVLSLLRTAMGTQATPPNQVLLGLALFLTFFIMAPVFGEVHAQAW-VPLSNGD  148
            T+F +I + L + R A+G Q  PPN  L G+AL  T F+MAPV  E++ +    PL  G+
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  149  I-NFPEFLRQAQGPLREFMMAQTREPDLALFARLADIGE-------LQGPADVPMRILVP  200
              ++    R    PL+ FM   TR+ D  + A+L D  +        + ++   + + +P
Sbjct  72   TEKLQASARTVIEPLQRFM---TRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIP  128

Query  201  SFVTSELKTAFQIGFTIFIPFLIIDLVVASTLMSLGMMMVPPITISLPFKLMLFVLVDGW  260
            +FV SEL+++F+IGF I+IPF++IDL+V++ L++LGM MV+P+T+SLP+KL+LFV+V GW
Sbjct  129  AFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGW  188

Query  261  QLLIGSLAESFY  272
              L++SL   FY
Sbjct  189  SRLLDSL---FY  197

277) Sulac_3139 in NC_016884


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 93.1 bits (334),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 83/199 (42%), Positives = 135/199 (68%), Gaps = 6/199 (3%)

Query  57   MAFIPGLLLTMTAFTRVITVLSFTRSALGLQQTPPNQVLVGLALFLTFFIMQPTLTAINH  116
            M++IP LL+  TAF ++   L +TR+A+G+QQ PPN  L G+AL  T F+M P    +++
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  117  QAL-HPY-LTGHLTLVEAGRRALGPLRQFMYHETRPSDLALFLQLDHVHAPRTLAGVPTA  174
            +   HP  L     L  ++R  + PL++FM ++T P  +A +L+  +   P+ +A+ ++ 
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  175  A----LIPAFIISELKTAFEIGVYIFIPFVMIDLVVSTVLMSMGMMMVpptlislplkll  230
                  IPAF++SEL+++FEIG  I+IPF++IDL+VS +L+++GM MV+P  +SLPLKLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  231  lfvlANGWSLVVQSLVMSF  249
            LFV+ +GWS +++SL  S+
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

278) fliP in NC_015757


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 93.1 bits (334),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 83/199 (42%), Positives = 135/199 (68%), Gaps = 6/199 (3%)

Query  57   MAFIPGLLLTMTAFTRVITVLSFTRSALGLQQTPPNQVLVGLALFLTFFIMQPTLTAINH  116
            M++IP LL+  TAF ++   L +TR+A+G+QQ PPN  L G+AL  T F+M P    +++
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  117  QAL-HPY-LTGHLTLVEAGRRALGPLRQFMYHETRPSDLALFLQLDHVHAPRTLAGVPTA  174
            +   HP  L     L  ++R  + PL++FM ++T P  +A +L+  +   P+ +A+ ++ 
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  175  A----LIPAFIISELKTAFEIGVYIFIPFVMIDLVVSTVLMSMGMMMVpptlislplkll  230
                  IPAF++SEL+++FEIG  I+IPF++IDL+VS +L+++GM MV+P  +SLPLKLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  231  lfvlANGWSLVVQSLVMSF  249
            LFV+ +GWS +++SL  S+
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

279) Hipma_0871 in NC_015318


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 91.5 bits (328),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 79/197 (41%), Positives = 139/197 (71%), Gaps = 8/197 (4%)

Query  59   PSILIMMTSFTRIIIVLAILRQALGTQQMPPNQILIGIALFLTLFIMSPQINTIYKTAY-  117
            P +LI+ T+F +I + L I R+A+G QQ+PPN  L GIAL  T+F+M+P  + + +    
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  118  --LPLQKNEITLEGAYKNATKPLKTFMLKQTRQKDLALFLRIAKKPNPKN-PQELSMD--  172
              L L + E  L+++ +    PL+ FM ++T    +A +L  +++  PK+ +++ S +  
Sbjct  65   HPLELGNTE-KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDL  123

Query  173  -IVIPAFIISELKTAFEMGFIIYIPFLIIDMVVssilmsmgmmmlppimislpFKLLIFV  231
             + IPAF++SEL+++FE+GF+IYIPF++ID++VS++L+++GM M++P+ +SLP+KLL+FV
Sbjct  124  LLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFV  183

Query  232  LADGWNLVVMSLFKSFM  248
            +  GW+ ++ SLF S+M
Sbjct  184  MVSGWSRLLDSLFYSYM  200

280) Mahau_0870 in NC_015520


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 91.0 bits (326),  Expect = 6e-20, Method: Compositional matrix adjust.
 Identities = 76/188 (41%), Positives = 134/188 (72%), Gaps = 6/188 (3%)

Query  75   TSFTRIIVVLSFVRSALGLQQMPPNQVIIGLALFLTFFTMAPVATQINQTAL-QPYMNGQ  133
            T+F +I + L + R+A+G+QQ+PPN  + G+AL  T F MAPVA +++Q    +P   G+
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  134  IEQQQAIDNAMV-PLREFMFKETREKDLNLFVNLSGMDKPEQLSDISST----VLIPAFI  188
             E+ QA   +++ PL+ FM ++T    +  +++ +    P +++D +S     + IPAF+
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  189  ISELKTAFQIGFLIYVPFIVIDMVVATTLmsmgmmmippvmisLPFKVLLFIMVDGWNLV  248
            +SEL+++F+IGFLIY+PFIVID++V+  L+++GM M++P+ +SLP+K+LLF+MV GW+ +
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  249  VQSLITSF  256
            ++SL+ S+
Sbjct  192  LDSLFYSY  199

281) PT7_0779 in NC_015458


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 90.7 bits (325),  Expect = 7e-20, Method: Compositional matrix adjust.
 Identities = 77/192 (41%), Positives = 125/192 (66%), Gaps = 15/192 (7%)

Query  74   TGFTRIIIVLGLLRNAMGTGASPPNSILIGLALFLTFFAMSPVFDQIYADAY-QPLSNGV  132
            T+F +I + L + RNA+G    PPN  L G+AL  T F M+PV +++      +PL  G 
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  133  IA-FEEALERGIKPLHSFMLHQTREADLTMFANMANVAE----LQTAEEVPLRVL---VP  184
               ++ +    I PL+ FM   TR++D  + A++ + ++     + A++ +   L   +P
Sbjct  72   TEKLQASARTVIEPLQRFM---TRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIP  128

Query  185  AFMASELKTAFQIGFTIFIPFLIIDLVVASVLMALGMMMVPPVTISLPFKLMLFVLADGW  244
            AF+ SEL+++F+IGF I+IPF++IDL+V+++L+ALGM MV+P+T+SLP+KL+LFV+  GW
Sbjct  129  AFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGW  188

Query  245  HLLLGSLARSFY  256
              LL+SL   FY
Sbjct  189  SRLLDSL---FY  197

282) Bphyt_5212 in NC_010676


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 88.4 bits (316),  Expect = 3e-19, Method: Compositional matrix adjust.
 Identities = 81/200 (41%), Positives = 141/200 (71%), Gaps = 4/200 (2%)

Query  17   LGLLPLIVTMTTSFTKFSIVLTLLRSAVGVQQAPGNmaisalalaatlvvmaPTMEKIGG  76
            ++L+P+++ + T+F K+++ L + R+A+GVQQ P NMA+ ++ALAAT+ VMAP  + +  
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  77   DLSLGERVERGQFPDVTEVYQAVRGPLGEFMMEHSRPSERAFLVTAAKRIDP---ARDAQ  133
             +  ++ +E G+   +    ++V  PL  FM  ++ P   A L+  ++R+ P   A +A 
Sbjct  61   RVH-DHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQAS  119

Query  134  ETDFSLLIPAFMISEISSGFEAGFLLYMAFLIIDLVIANVLTAMGMVMLSPTTVSTPLKL  193
              D+ L IPAF++SE+ +GFE GFL+Y++F++IDL+++N+L A+GM M+SP T+S PLKL
Sbjct  120  KNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKL  179

Query  194  FVLVSVSGISKLMHGLIVSY  213
            +++V VSG S+L+++L+ SY
Sbjct  180  LLFVMVSGWSRLLDSLFYSY  199

283) fliP in NC_010334


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 87.8 bits (314),  Expect = 5e-19, Method: Compositional matrix adjust.
 Identities = 81/199 (41%), Positives = 141/199 (71%), Gaps = 6/199 (3%)

Query  49   LSFLPALLMMLTSFTRIIVVLAILRQALGLQQSPPNKVLIGIALVMTIFIMRPVGQEIYD  108
            +S++P LL++ T+F +I + L I R+A+G+QQ PPN  L GIAL  T+F+M PV++E+ +
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  109  DAF-LPYDMGQIELPEAVARGEV-PLRQFMLAQTRETDLEQMLKIAD----EPITLTADE  162
                 P ++G+ E  +A AR  + PL++FM  +T    + ++L  ++      ++  A  
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  163  IPFFVLMPAFVLSELKTAFQIGFLLFLPFLVIDlvvasvlmsmgmmmlspliislpFKLM  222
              +++ +PAFVLSEL+++F+IGFL+++PF+VIDL+V+++L+++GM M+SP+ +SLP+KL+
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  223  VFVLVDGWSMTVSTLVASY  241
            +FV+V GWS  + +L  SY
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

284) fliP in NC_004547


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 87.3 bits (312),  Expect = 7e-19, Method: Compositional matrix adjust.
 Identities = 83/206 (41%), Positives = 137/206 (67%), Gaps = 19/206 (9%)

Query  64   LTFLPAALLMMTSFTRIIIVLSLLRNALGTPTAPPNQVllgltlfltffVMSPVLN----  119
            ++++P  L++ T+F +I + L + RNA+G    PPN  L G++L  T FVM+PV +    
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  120  RVYDEAYLPFSQDQISMEVAIERGAEPLREFMLRQTRETDLALFTRLAEIPE----IQGP  175
            RV D++ L +++ +  ++ +     EPL+ FM   TR+TD  + ++L +  +     + +
Sbjct  61   RVHDHP-LELGNTE-KLQASARTVIEPLQRFM---TRNTDPDVVAHLLDNTQRMWPKEMA  115

Query  176  EAVPMRVLL---PAFVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATISL  232
            +  +   LL   PAFV SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P T+SL
Sbjct  116  DQASKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSL  175

Query  233  PFKLMLFVLVDGWQLLLGSLAQSFYS  258
            P+KL+LFV+V GW  LL+SL   FYS
Sbjct  176  PLKLLLFVMVSGWSRLLDSL---FYS  198

285) PC1_2585 in NC_012917


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 87.0 bits (311),  Expect = 9e-19, Method: Compositional matrix adjust.
 Identities = 83/206 (41%), Positives = 137/206 (67%), Gaps = 19/206 (9%)

Query  64   LTFIPAALLMMTSFTRIIIVLSLLRNALGTPTAPPNQVllgltlfltffVMSPVLN----  119
            +++IP  L++ T+F +I + L + RNA+G    PPN  L G++L  T FVM+PV +    
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  120  RVYEEAYLPFSQDQISMEVAIERGAEPVREFMLRQTRETDLALFTRLAEIPE----IQGP  175
            RV +++ L +++ +  ++ +     EP++ FM   TR+TD  + ++L +  +     + +
Sbjct  61   RVHDHP-LELGNTE-KLQASARTVIEPLQRFM---TRNTDPDVVAHLLDNTQRMWPKEMA  115

Query  176  EAVPMRVLL---PAFVTSELKTAFQIGFTIFIPFLIIDLVVASVLMALGMMMVPPATISL  232
            +  +   LL   PAFV SEL+++F+IGF I+IPF++IDL+V+++L+ALGM MV+P T+SL
Sbjct  116  DQASKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSL  175

Query  233  PFKLMLFVLVDGWQLLLGSLAQSFYS  258
            P+KL+LFV+V GW  LL+SL   FYS
Sbjct  176  PLKLLLFVMVSGWSRLLDSL---FYS  198

286) fliP in NC_009792


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 86.5 bits (309),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 75/184 (41%), Positives = 129/184 (71%), Gaps = 8/184 (4%)

Query  68   TCFTRFIIVLAILRQALGLQQSPPNKiltgialaltllVMRPVWTTIYTDAID-PFQKDE  126
            T F ++ + L I R+A+G+QQ PPN  L GIALA T++VM PV   +     D P++ ++
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  127  ITLKQALAKAEV-PLKNYMLAQTNNKAMAQMMSIA------GIEGDAREQDLTIVTPAYL  179
                QA A++ + PL+ +M  +T+   +A+++  +       + ++A  +DL +  PA++
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  180  LSELKTAFQIGFMIYIPFLVIDLIVASILMAMGMMMLSPLIVSLPFKLMLFVLCDGWTLI  239
            LSEL+++F+IGF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFV+  GW+ +
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  240  VGTL  243
            +++L
Sbjct  192  LDSL  195

287) PCC21_026900 in NC_018525


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 85.5 bits (305),  Expect = 3e-18, Method: Compositional matrix adjust.
 Identities = 83/203 (41%), Positives = 134/203 (67%), Gaps = 19/203 (9%)

Query  67   IPAALLMMTSFTRIIIVLSLLRNALGTPTAPPNQVllgltlfltffVMSPVLN----RVY  122
            IP  L++ T+F +I + L + RNA+G    PPN  L G++L  T FVM+PV +    RV 
Sbjct  4    IPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVH  63

Query  123  DEAYLPFSQDQISMEVAIERGAEPVREFMLRQTRETDLALFTRLAEIPE----IQGPEAV  178
            D++ L +++ +  ++ +     EP++ FM   TR+TD  + ++L +  +     + ++  
Sbjct  64   DHP-LELGNTE-KLQASARTVIEPLQRFM---TRNTDPDVVAHLLDNTQRMWPKEMADQA  118

Query  179  PMRVLL---PAFVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATISLPFK  235
            +   LL   PAFV SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P T+SLP+K
Sbjct  119  SKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLK  178

Query  236  LMLFVLVDGWQLLLGSLAQSFYS  258
            L+LFV+V GW  LL+SL   FYS
Sbjct  179  LLLFVMVSGWSRLLDSL---FYS  198

288) Celgi_0475 in NC_015671


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 83.4 bits (297),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 85/203 (42%), Positives = 141/203 (70%), Gaps = 14/203 (6%)

Query  84   LSVAPALLLMMTSFTKIFVVLAFTRNALGLQGVPPNQVLAGLALFLSMFVMAPVLGDVNA  143
            +S+ P LL++ T+F KI + L +TRNA+G+Q VPPN  L G+AL  +MFVMAPV  +++ 
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  144  DAVQPYLDGELTFSQAVDVGS----GPLRSFMLDHTREQDLALL------TRAADQPNPA  193
               +  L  EL  ++ ++ ++     PL+ FM  +T  + +A L       ++ + ++ A
Sbjct  61   RVHDHPL--ELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA  118

Query  194  TPEDVPLATLIPAFLLSELRSAFIMGFVIFVPFLVIDLVVSavlmamgmmmlppvmISLP  253
            + +D+ LA  IPAF+LSEL+++F +GF+I++PF+VIDL+VS +L+A+GM M++P+ +SLP
Sbjct  119  SKNDLLLA--IPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLP  176

Query  254  FKVLLFVLVDGWGLVVTSLVRSY  276
            +K+LLFV+V GW+ ++ SL  SY
Sbjct  177  LKLLLFVMVSGWSRLLDSLFYSY  199

289) Rahaq2_2559 in NC_016818


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 81.8 bits (291),  Expect = 3e-17, Method: Compositional matrix adjust.
 Identities = 78/189 (42%), Positives = 120/189 (64%), Gaps = 9/189 (4%)

Query  78   SFTRIIIVLGLLRNALGTPSAPPNQVllglglfltffVMAPVFDKIYSDAY-QPFS-ENK  135
            +F +I + L + RNA+G    PPN  L G++L  T FVMAPV + +      +P+   N 
Sbjct  13   AFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGNT  72

Query  136  ITMQEAMDKGAQPLRQFMLRQTRESDLA-LYARLANIPPLAGPEAVPMRILL---PAYVT  191
              +Q +     +PL++FM R+T    +A L      + P   ++  +   LL   PA+V 
Sbjct  73   EKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFVL  132

Query  192  SELKTAFQIGFTVFIPFMIIDLVVASVLMALGMMMVPPATISLPFKLMLFVLVDGWQLLL  251
            SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P T+SLP+KL+LFV+V GW  LL
Sbjct  133  SELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRLL  192

Query  252  GSLAQSFYS  260
            +SL   FYS
Sbjct  193  DSL---FYS  198

290) fliP in NC_017047


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 81.8 bits (291),  Expect = 3e-17, Method: Compositional matrix adjust.
 Identities = 78/189 (42%), Positives = 120/189 (64%), Gaps = 9/189 (4%)

Query  78   SFTRIIIVLGLLRNALGTPSAPPNQVllglglfltffVMAPVFDKIYSDAY-QPFS-ENK  135
            +F +I + L + RNA+G    PPN  L G++L  T FVMAPV + +      +P+   N 
Sbjct  13   AFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGNT  72

Query  136  ITMQEAMDKGAQPLRQFMLRQTRESDLA-LYARLANIPPLAGPEAVPMRILL---PAYVT  191
              +Q +     +PL++FM R+T    +A L      + P   ++  +   LL   PA+V 
Sbjct  73   EKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFVL  132

Query  192  SELKTAFQIGFTVFIPFMIIDLVVASVLMALGMMMVPPATISLPFKLMLFVLVDGWQLLL  251
            SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P T+SLP+KL+LFV+V GW  LL
Sbjct  133  SELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRLL  192

Query  252  GSLAQSFYS  260
            +SL   FYS
Sbjct  193  DSL---FYS  198

291) Rahaq_2499 in NC_015061


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 81.8 bits (291),  Expect = 3e-17, Method: Compositional matrix adjust.
 Identities = 78/189 (42%), Positives = 120/189 (64%), Gaps = 9/189 (4%)

Query  78   SFTRIIIVLGLLRNALGTPSAPPNQVllglglfltffVMAPVFDKIYSDAY-QPFS-ENK  135
            +F +I + L + RNA+G    PPN  L G++L  T FVMAPV + +      +P+   N 
Sbjct  13   AFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGNT  72

Query  136  ITMQEAMDKGAQPLRQFMLRQTRESDLA-LYARLANIPPLAGPEAVPMRILL---PAYVT  191
              +Q +     +PL++FM R+T    +A L      + P   ++  +   LL   PA+V 
Sbjct  73   EKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFVL  132

Query  192  SELKTAFQIGFTVFIPFMIIDLVVASVLMALGMMMVPPATISLPFKLMLFVLVDGWQLLL  251
            SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P T+SLP+KL+LFV+V GW  LL
Sbjct  133  SELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRLL  192

Query  252  GSLAQSFYS  260
            +SL   FYS
Sbjct  193  DSL---FYS  198

292) RSPPHO_01389 in NC_017059


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 80.7 bits (287),  Expect = 7e-17, Method: Compositional matrix adjust.
 Identities = 77/189 (41%), Positives = 125/189 (67%), Gaps = 9/189 (4%)

Query  58   LSVAPGLLIMVTSFTRIAVVLSILRQALGTQTTPPNMVLISLAMFMTFFIMAPTFQQAWD  117
            +S+ P LLI+ T+F +IA+ L I R+A+G Q  PPNM L ++A+  T F+MAP  ++  +
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  118  DGVA-PLIREDITEEQAFERTV-EPFRAFMLHHVRPKDLELFAKFRGEK---AETVEQVS  172
                 PL   +    QA  RTV EP++ FM ++  P  +  +     ++    E  +Q S
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLD-NTQRMWPKEMADQAS  119

Query  173  TWSL---VPAFMISELRRAFEIGFLIYLPFIVIDMVIASVlmsmgmmmlppmmlampFKL  229
               L   +PAF++SEL+ +FEIGFLIY+PFIVID++++++L+++GM M++PM L++P+KL
Sbjct  120  KNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKL  179

Query  230  IFFVLVDGW  238
            ++FV+V GW
Sbjct  180  LLFVMVSGW  188

293) fliP in NC_009012


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 80.2 bits (285),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 76/187 (41%), Positives = 127/187 (68%), Gaps = 7/187 (3%)

Query  67   PSILIMMTSFVRIIIVLSFFRNAIGTQQMPPNQVLIGLALFLTLFIMRPVLTEINETAFK  126
            P +LI+ T+F++I + L + RNAIG QQ+PPN  L G+AL  T+F+M PV  E+++    
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  127  PYTNQEITQEVALERSS----DIIKRFMLKQTSKNDLG-LFVSLSGMETPIKEEDIPKLP  181
                 E+ +   L+ S+    + ++RFM ++T  + ++ L+ +   M      ++ +K  
Sbjct  65   H--PLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKND  122

Query  182  LTIVIPAFIISELTIAFKIGFLIYIPFLVIDmvvsstlmsmgmmmlppvmISLPFKILLF  241
            L + IPAF++SEL  +F IGFLIYIPF+VID++VS+ L+++GM M++P+ +SLP+K+LLF
Sbjct  123  LLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLF  182

Query  242  IMVGGWN  248
            +MV+GW+
Sbjct  183  VMVSGWS  189

294) Clo1313_1739 in NC_017304


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 80.2 bits (285),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 76/187 (41%), Positives = 127/187 (68%), Gaps = 7/187 (3%)

Query  67   PSILIMMTSFVRIIIVLSFFRNAIGTQQMPPNQVLIGLALFLTLFIMRPVLTEINETAFK  126
            P +LI+ T+F++I + L + RNAIG QQ+PPN  L G+AL  T+F+M PV  E+++    
Sbjct  5    PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD  64

Query  127  PYTNQEITQEVALERSS----DIIKRFMLKQTSKNDLG-LFVSLSGMETPIKEEDIPKLP  181
                 E+ +   L+ S+    + ++RFM ++T  + ++ L+ +   M      ++ +K  
Sbjct  65   H--PLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKND  122

Query  182  LTIVIPAFIISELTIAFKIGFLIYIPFLVIDmvvsstlmsmgmmmlppvmISLPFKILLF  241
            L + IPAF++SEL  +F IGFLIYIPF+VID++VS+ L+++GM M++P+ +SLP+K+LLF
Sbjct  123  LLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLF  182

Query  242  IMVGGWN  248
            +MV+GW+
Sbjct  183  VMVSGWS  189

295) Sked_31060 in NC_013521


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 80.2 bits (285),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 80/199 (41%), Positives = 137/199 (69%), Gaps = 6/199 (3%)

Query  90   LSVAPSLLLMMTSFTKIFVVLALTRNALGLQGVPPNQVLAGLALFLSLFIMAPIIGQVNE  149
            +S+ P LL++ T+F KI + L +TRNA+G+Q VPPN  L G+AL  ++F+MAP+  ++++
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  150  -LGVQPYVNGGLD-FGAAVEAGSAPLREFMLGQTREEDIALMTRAADQPNPTD----PST  203
             +  +P   G  + + A+  +   PL+ FM  +T  + +A +   +++  P +    +S 
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  204  VPMLTLIPSFMLSELRAAFIIGFVIFIPFLVIDlvvsaslmsmgmmmlppvmISLPFKIL  263
              +L  IP+F+LSEL+A+F IGF+I+IPF+VIDL+VS  L+++GM M++P+ +SLP+K+L
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  264  LFVLVDGWGMIVTALVGSY  282
            LFV+V GW+ ++ +L  SY
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

296) fliP in NC_010530


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 79.7 bits (283),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 78/192 (41%), Positives = 125/192 (66%), Gaps = 12/192 (6%)

Query  91   TGFTRVIIVLGLLRNALGTATSPPNQVLVGLSLFLTFFVMAPVF----DRVYNDAYKPLS  146
            T+F ++ + L + RNA+G    PPN  L G++L  T FVMAPV     +RV ++   PL 
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDH---PLE  68

Query  147  enklsleaaaakaaepl-kaFMLRQTREKDLAMFAQMAK---APEM-QGPEEVPLSILVP  201
              +     A+A++     + FM R+T    +A + + ++   + EM + +    L + +P
Sbjct  69   LGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIP  128

Query  202  AFVTSELKTAFQIGFTIFIPFLIIDLVVASVLMAMGMMMVPPATISLPFKLMLFVLVDGW  261
            AFV SEL+++F+IGF I+IPF++IDL+V+++L+A+GM MV+P T+SLP+KL+LFV+V GW
Sbjct  129  AFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGW  188

Query  262  QLLLGSLAQSFM  273
              LL+SL  S+M
Sbjct  189  SRLLDSLFYSYM  200

297) Achl_2976 in NC_011886


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 79.2 bits (281),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 81/200 (41%), Positives = 139/200 (70%), Gaps = 8/200 (4%)

Query  69   LSVAPALLLMMTSFTKIFVVLAMTRNALSLPSIPPNQVLAGLALFLSLFVMWPVLTEINT  128
            +S+ P LL++ T+F KI + L +TRNA+++  +PPN  L G+AL  ++FVM PV  E++ 
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQ-  59

Query  129  DAVQPY---LNGNLDFNGAFSAGAGPLQQFMLGHTREEDIA-LMTRAARM-PN--PENPG  181
            + V+     L     ++++  +   PLQ+FM  +T  + +A L+  + RM P+  +++++
Sbjct  60   QRVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQAS  119

Query  182  AVPLQTLIPAFMISELRAAFIIGFVIFIPFLVIDLVvsaalmsmgmmmlppvmISLPFKI  241
               L   IPAF++SEL+A+F IGF+I+IPF+VIDL+VS  L+++GM M++P+ +SLP+K+
Sbjct  120  KNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKL  179

Query  242  LLFILVDGWGLVITSLIQSY  261
            LLF++V GW+ ++ SL+ SY
Sbjct  180  LLFVMVSGWSRLLDSLFYSY  199

298) MDS_4752 in NC_015410


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 78.1 bits (277),  Expect = 4e-16, Method: Compositional matrix adjust.
 Identities = 80/197 (41%), Positives = 140/197 (72%), Gaps = 10/197 (5%)

Query  55   LGFLPALLMMMTCFTRFIIVLAILRQAIGLQQSPPNPVLIGIALCLTLLVMRPVWQEMYT  114
            ++++P LL++ T F ++ + L I R+AIG+QQ PPN  L GIAL  T++VM PV +EM  
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEM--  58

Query  115  EAYVPFEADQISLEQGLGEGKRII----SQFMLAQTSKNSLETLVALAD----EEMPDDL  166
            +  V  ++ +++  + L  + R +     +FM  +T  + +  L+  ++     EM+D+ 
Sbjct  59   QQRVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA  118

Query  167  AQLDFSLLLPAFVLSELKTAFQLGFMIFVPFLVIDlvvasvlmamgmmmlspmmislpFK  226
            ++ D+ L +PAFVLSEL+++F++GF+I++PF+VIDL+V+++L+A+GM M+SPM +SLP+K
Sbjct  119  SKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLK  178

Query  227  LLVFVLVDGWTLLVGTL  243
            LL+FV+V GW+ L+++L
Sbjct  179  LLLFVMVSGWSRLLDSL  195

299) fliP in NC_017831


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 76.8 bits (272),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 80/197 (41%), Positives = 134/197 (69%), Gaps = 10/197 (5%)

Query  60   LSFLPAMLLMMTSFTRIIIVLSLLRQAIGTASTPPNQVLVGLALFLTLFVMSPV---LDR  116
            +S++P +L++ T+F +I + L + R+AIG    PPN  L G+AL  T+FVM+PV   +++
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  117  AYNDAYKPFSEGTLQMDQAVQRGT-APFKAFMLKQTRETDLA-LFAKISKAAPMQGPEDV  174
              +D   P+  G  +  QA  R    P++ FM ++T    +A L+ +  +  P + +++ 
Sbjct  61   RVHD--HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA  118

Query  175  P---LSLLVPAFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvsPATVSLPFK  231
            +   L L +PAFV SEL++GF+IGF I+IPF++ID++V+++L+++GM MVSP T+SLP+K
Sbjct  119  SKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLK  178

Query  232  LMLFVLVDGWQLLIGSL  248
            L+LFV+V GW  L++SL
Sbjct  179  LLLFVMVSGWSRLLDSL  195

300) fliP in NC_009076


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 76.8 bits (272),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 80/197 (41%), Positives = 134/197 (69%), Gaps = 10/197 (5%)

Query  83   LSFLPAMLLMMTSFTRIIIVLSLLRQAIGTASTPPNQVLVGLALFLTLFVMSPV---LDR  139
            +S++P +L++ T+F +I + L + R+AIG    PPN  L G+AL  T+FVM+PV   +++
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  140  AYNDAYKPFSEGTLQMDQAVQRGT-APFKAFMLKQTRETDLA-LFAKISKAAPMQGPEDV  197
              +D   P+  G  +  QA  R    P++ FM ++T    +A L+ +  +  P + +++ 
Sbjct  61   RVHD--HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA  118

Query  198  P---LSLLVPAFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvsPATVSLPFK  254
            +   L L +PAFV SEL++GF+IGF I+IPF++ID++V+++L+++GM MVSP T+SLP+K
Sbjct  119  SKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLK  178

Query  255  LMLFVLVDGWQLLIGSL  271
            L+LFV+V GW  L++SL
Sbjct  179  LLLFVMVSGWSRLLDSL  195

301) fliP in NC_007434


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 76.8 bits (272),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 80/197 (41%), Positives = 134/197 (69%), Gaps = 10/197 (5%)

Query  60   LSFLPAMLLMMTSFTRIIIVLSLLRQAIGTASTPPNQVLVGLALFLTLFVMSPV---LDR  116
            +S++P +L++ T+F +I + L + R+AIG    PPN  L G+AL  T+FVM+PV   +++
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  117  AYNDAYKPFSEGTLQMDQAVQRGT-APFKAFMLKQTRETDLA-LFAKISKAAPMQGPEDV  174
              +D   P+  G  +  QA  R    P++ FM ++T    +A L+ +  +  P + +++ 
Sbjct  61   RVHD--HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA  118

Query  175  P---LSLLVPAFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvsPATVSLPFK  231
            +   L L +PAFV SEL++GF+IGF I+IPF++ID++V+++L+++GM MVSP T+SLP+K
Sbjct  119  SKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLK  178

Query  232  LMLFVLVDGWQLLIGSL  248
            L+LFV+V GW  L++SL
Sbjct  179  LLLFVMVSGWSRLLDSL  195

302) fliP in NC_009074


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 76.8 bits (272),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 80/197 (41%), Positives = 134/197 (69%), Gaps = 10/197 (5%)

Query  83   LSFLPAMLLMMTSFTRIIIVLSLLRQAIGTASTPPNQVLVGLALFLTLFVMSPV---LDR  139
            +S++P +L++ T+F +I + L + R+AIG    PPN  L G+AL  T+FVM+PV   +++
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  140  AYNDAYKPFSEGTLQMDQAVQRGT-APFKAFMLKQTRETDLA-LFAKISKAAPMQGPEDV  197
              +D   P+  G  +  QA  R    P++ FM ++T    +A L+ +  +  P + +++ 
Sbjct  61   RVHD--HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA  118

Query  198  P---LSLLVPAFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvsPATVSLPFK  254
            +   L L +PAFV SEL++GF+IGF I+IPF++ID++V+++L+++GM MVSP T+SLP+K
Sbjct  119  SKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLK  178

Query  255  LMLFVLVDGWQLLIGSL  271
            L+LFV+V GW  L++SL
Sbjct  179  LLLFVMVSGWSRLLDSL  195

303) BPC006_I0032 in NC_018527


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 76.8 bits (272),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 80/197 (41%), Positives = 134/197 (69%), Gaps = 10/197 (5%)

Query  83   LSFLPAMLLMMTSFTRIIIVLSLLRQAIGTASTPPNQVLVGLALFLTLFVMSPV---LDR  139
            +S++P +L++ T+F +I + L + R+AIG    PPN  L G+AL  T+FVM+PV   +++
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  140  AYNDAYKPFSEGTLQMDQAVQRGT-APFKAFMLKQTRETDLA-LFAKISKAAPMQGPEDV  197
              +D   P+  G  +  QA  R    P++ FM ++T    +A L+ +  +  P + +++ 
Sbjct  61   RVHD--HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA  118

Query  198  P---LSLLVPAFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvsPATVSLPFK  254
            +   L L +PAFV SEL++GF+IGF I+IPF++ID++V+++L+++GM MVSP T+SLP+K
Sbjct  119  SKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLK  178

Query  255  LMLFVLVDGWQLLIGSL  271
            L+LFV+V GW  L++SL
Sbjct  179  LLLFVMVSGWSRLLDSL  195

304) fliP in NC_021884


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 76.8 bits (272),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 80/197 (41%), Positives = 134/197 (69%), Gaps = 10/197 (5%)

Query  60   LSFLPAMLLMMTSFTRIIIVLSLLRQAIGTASTPPNQVLVGLALFLTLFVMSPV---LDR  116
            +S++P +L++ T+F +I + L + R+AIG    PPN  L G+AL  T+FVM+PV   +++
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  117  AYNDAYKPFSEGTLQMDQAVQRGT-APFKAFMLKQTRETDLA-LFAKISKAAPMQGPEDV  174
              +D   P+  G  +  QA  R    P++ FM ++T    +A L+ +  +  P + +++ 
Sbjct  61   RVHD--HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA  118

Query  175  P---LSLLVPAFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvsPATVSLPFK  231
            +   L L +PAFV SEL++GF+IGF I+IPF++ID++V+++L+++GM MVSP T+SLP+K
Sbjct  119  SKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLK  178

Query  232  LMLFVLVDGWQLLIGSL  248
            L+LFV+V GW  L++SL
Sbjct  179  LLLFVMVSGWSRLLDSL  195

305) fliP in NC_012695


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 76.8 bits (272),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 80/197 (41%), Positives = 134/197 (69%), Gaps = 10/197 (5%)

Query  83   LSFLPAMLLMMTSFTRIIIVLSLLRQAIGTASTPPNQVLVGLALFLTLFVMSPV---LDR  139
            +S++P +L++ T+F +I + L + R+AIG    PPN  L G+AL  T+FVM+PV   +++
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  140  AYNDAYKPFSEGTLQMDQAVQRGT-APFKAFMLKQTRETDLA-LFAKISKAAPMQGPEDV  197
              +D   P+  G  +  QA  R    P++ FM ++T    +A L+ +  +  P + +++ 
Sbjct  61   RVHD--HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA  118

Query  198  P---LSLLVPAFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvsPATVSLPFK  254
            +   L L +PAFV SEL++GF+IGF I+IPF++ID++V+++L+++GM MVSP T+SLP+K
Sbjct  119  SKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLK  178

Query  255  LMLFVLVDGWQLLIGSL  271
            L+LFV+V GW  L++SL
Sbjct  179  LLLFVMVSGWSRLLDSL  195

306) fliP in NC_007651


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 76.8 bits (272),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 79/195 (41%), Positives = 130/195 (67%), Gaps = 6/195 (3%)

Query  83   LSFLPAMLLMMTSFTRIIIVLSLLRQAIGTASTPPNQVLVGLALFLTLFVMSPVLDKAYT  142
            +S++P +L++ T+F +I + L + R+AIG    PPN  L G+AL  T+FVM+PV +    
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  143  DAY-KPFSEGTLQMDQAVQRGT-APFKTFMLKQTRETDLA-LFAKISKAAPMQGPEDVP-  198
                 P+  G  +  QA  R    P++ FM ++T    +A L+ +  +  P + +++ + 
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  199  --LSLLVPAFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvsPATVSLPFKLM  256
              L L +PAFV SEL++GF+IGF I+IPF++ID++V+++L+++GM MVSP T+SLP+KL+
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  257  LFVLVDGWQLLIGSL  271
            LFV+V GW  L++SL
Sbjct  181  LFVMVSGWSRLLDSL  195

307) fliP in NC_006350


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 76.3 bits (270),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 79/197 (41%), Positives = 134/197 (69%), Gaps = 10/197 (5%)

Query  60   LSFLPAMLLMMTSFTRIIIVLSLLRQAIGTASTPPSQVLVGLALFLTLFVMSPV---LDR  116
            +S++P +L++ T+F +I + L + R+AIG    PP+  L G+AL  T+FVM+PV   +++
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  117  AYNDAYKPFSEGTLQMDQAVQRGT-APFKAFMLKQTRETDLA-LFAKISKAAPMQGPEDV  174
              +D   P+  G  +  QA  R    P++ FM ++T    +A L+ +  +  P + +++ 
Sbjct  61   RVHD--HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA  118

Query  175  P---LSLLVPAFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvsPATVSLPFK  231
            +   L L +PAFV SEL++GF+IGF I+IPF++ID++V+++L+++GM MVSP T+SLP+K
Sbjct  119  SKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLK  178

Query  232  LMLFVLVDGWQLLIGSL  248
            L+LFV+V GW  L++SL
Sbjct  179  LLLFVMVSGWSRLLDSL  195

308) fliP in NC_019954


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 76.0 bits (269),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 74/182 (41%), Positives = 126/182 (70%), Gaps = 5/182 (2%)

Query  77   FTRTIIVLSFVRNGLGVQQVPPTQVLIGLALFITVFVMAPVWTEINSEAI-QPYMNQEID  135
            F +  + L + RN++GVQQVPP   L G+AL  T+FVMAPV  E++     +P    + +
Sbjct  14   FLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGNTE  73

Query  136  TSEALRRSQI-PLRNFMFRQTREKDLALFVHYAKLETPLNTLDDIPTYVL---IPSFIIS  191
              +A  R+ I PL+ FM R+T    +A +++ ++   P +  D+ +   L   IP+F++S
Sbjct  74   KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFVLS  133

Query  192  ELKTAFQMGFIIFIPFLVIDMIVsstlmsmgmlmlppimislpFKILLFVMVDGWNLVIN  251
            EL+++F++GF+I+IPF+VID+IVS+ L+++GM M++P+ +SLP+K+LLFVMV GW+ +++
Sbjct  134  ELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRLLD  193

Query  252  SI  253
            S+
Sbjct  194  SL  195

309) TepRe1_1237 in NC_015519


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 76.0 bits (269),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 74/182 (41%), Positives = 126/182 (70%), Gaps = 5/182 (2%)

Query  77   FTRTIIVLSFVRNGLGVQQVPPTQVLIGLALFITVFVMAPVWTEINSEAI-QPYMNQEID  135
            F +  + L + RN++GVQQVPP   L G+AL  T+FVMAPV  E++     +P    + +
Sbjct  14   FLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGNTE  73

Query  136  TSEALRRSQI-PLRNFMFRQTREKDLALFVHYAKLETPLNTLDDIPTYVL---IPSFIIS  191
              +A  R+ I PL+ FM R+T    +A +++ ++   P +  D+ +   L   IP+F++S
Sbjct  74   KLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFVLS  133

Query  192  ELKTAFQMGFIIFIPFLVIDMIVsstlmsmgmlmlppimislpFKILLFVMVDGWNLVIN  251
            EL+++F++GF+I+IPF+VID+IVS+ L+++GM M++P+ +SLP+K+LLFVMV GW+ +++
Sbjct  134  ELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRLLD  193

Query  252  SI  253
            S+
Sbjct  194  SL  195

310) Celf_0690 in NC_015514


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 75.5 bits (267),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 81/201 (41%), Positives = 137/201 (69%), Gaps = 10/201 (4%)

Query  44   LSVAPALILMTTSFTKIFVVLSFTRNALGLQGVPPNQVLAGLALFLSLFVMAPVVSDIN-  102
            +S+ P L+++ T+F KI + L +TRNA+G+Q VPPN  L G+AL  ++FVMAPV  +++ 
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  103  SVGVQPY-LDGSLTFSQAVDVGSGPLREFMLGQTREQDLALL------TRAADQENPASP  155
             V  +P  L+ +  +  +      PL+ FM  +T  + +A L       ++ +  + AS 
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  156  EDVPFATLVPAFLLSELRSAFIMGFVIFVPFLVIDlvvsaslmsmgmmmlppvmISLPFK  215
            +D+ +A  +PAF+LSEL+++F +GF+I++PF+VIDL+VS  L+++GM M++P+ +SLP+K
Sbjct  121  NDLLLA--IPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLK  178

Query  216  ILLFVLVDGWGLVVTSLVGSY  236
            +LLFV+V GW+ ++ SL  SY
Sbjct  179  LLLFVMVSGWSRLLDSLFYSY  199

311) fliP in NC_006368


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 73.9 bits (261),  Expect = 8e-15, Method: Compositional matrix adjust.
 Identities = 83/204 (41%), Positives = 140/204 (69%), Gaps = 25/204 (12%)

Query  55   LTVLPGLLMAMTSFTRIIIVLSILRQAIGMAQTPTNQILIGIALFMTYFVMSPVFNKINE  114
            ++++P LL+  T+F +I + L I R+AIG+ Q P N  L GIAL  T FVM+PV +    
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHE---  57

Query  115  TAIQPYMNERI-DFSLALSNAQK----------PLRQFMLNQTRKNDLS-LFEKFAHNVP  162
                  M++R+ D +L L+N++K          PL++FM  +T  + ++ L+++  +  P
Sbjct  58   ------MQQRVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWP  111

Query  163  KTL-DEIPMSVL---IPAFITSELKTAFQIGFVLFLPFLIIDlvvssllmamgmmmlspl  218
            K + D+ + + L   IPAF+ SEL+++F+IGF++++PF++IDL+VS+LL+A+GM M+SP+
Sbjct  112  KEMADQASKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPM  171

Query  219  IISLPFKIMLFVMVDGWTLVLGSL  242
             +SLP+K++LFVMV GW+ +L+SL
Sbjct  172  TLSLPLKLLLFVMVSGWSRLLDSL  195

312) MYA_0034 in NC_017920


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 72.9 bits (257),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 80/197 (41%), Positives = 134/197 (69%), Gaps = 10/197 (5%)

Query  60   LSFLPAMLLMMTSFTRIIIVLSLLRQALGTATTPPNQVLLGLAMFLTFFVMSPV---LDK  116
            +S++P +L++ T+F +I + L + R+A+G    PPN  L G+A+  T FVM+PV   +++
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  117  AYNDGYKPFSDGSLPMEQAVQRGV-APFKGFMLKQTRETDLA-LFAKISKAAPMQGPEDV  174
              +D   P+  G+    QA  R V  P++ FM ++T    +A L+ +  +  P + +++ 
Sbjct  61   RVHD--HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA  118

Query  175  P---LSLLVPAFVTSELKTGFQIGFTIFIPFLIIDLvvasvlmsmgmmmvspstvsLPFK  231
            +   L L +PAFV SEL++GF+IGF I+IPF++IDL+V+++L+++GM MVSP T+SLP+K
Sbjct  119  SKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLK  178

Query  232  LMLFVLVDGWQLLIGSL  248
            L+LFV+V GW  L++SL
Sbjct  179  LLLFVMVSGWSRLLDSL  195

313) fliP in NC_009256


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 72.9 bits (257),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 80/197 (41%), Positives = 134/197 (69%), Gaps = 10/197 (5%)

Query  60   LSFLPAMLLMMTSFTRIIIVLSLLRQALGTATTPPNQVLLGLAMFLTFFVMSPV---LDK  116
            +S++P +L++ T+F +I + L + R+A+G    PPN  L G+A+  T FVM+PV   +++
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  117  AYNDGYKPFSDGSLPMEQAVQRGV-APFKGFMLKQTRETDLA-LFAKISKAAPMQGPEDV  174
              +D   P+  G+    QA  R V  P++ FM ++T    +A L+ +  +  P + +++ 
Sbjct  61   RVHD--HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA  118

Query  175  P---LSLLVPAFVTSELKTGFQIGFTIFIPFLIIDLvvasvlmsmgmmmvspstvsLPFK  231
            +   L L +PAFV SEL++GF+IGF I+IPF++IDL+V+++L+++GM MVSP T+SLP+K
Sbjct  119  SKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLK  178

Query  232  LMLFVLVDGWQLLIGSL  248
            L+LFV+V GW  L++SL
Sbjct  179  LLLFVMVSGWSRLLDSL  195

314) fliP in NC_011000


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 71.3 bits (251),  Expect = 5e-14, Method: Compositional matrix adjust.
 Identities = 79/197 (41%), Positives = 134/197 (69%), Gaps = 10/197 (5%)

Query  60   LSFLPAMLLMMTSFTRIIIVLSLLRQALGTATTPPNQVLVGLAMFLTFFVMSPV---LDR  116
            +S++P +L++ T+F +I + L + R+A+G    PPN  L G+A+  T FVM+PV   +++
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  117  AYNDGYKPFSDGSMPMEQAVQRGV-APFKTFMLKQTRETDLA-LFAKISKAAPMQGPDDV  174
              +D   P+  G+    QA  R V  P++ FM ++T    +A L+ +  +  P + +D+ 
Sbjct  61   RVHD--HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA  118

Query  175  P---LSLLVPAFVTSELKTGFQIGFTVFIPFLIIDmvvasvlmsmgmmmvspstvsLPFK  231
            +   L L +PAFV SEL++GF+IGF ++IPF++ID++V+++L+++GM MVSP T+SLP+K
Sbjct  119  SKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLK  178

Query  232  LMLFVLVDGWQLLIGSL  248
            L+LFV+V GW  L++SL
Sbjct  179  LLLFVMVSGWSRLLDSL  195

315) GEM_0035 in NC_018513


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 70.2 bits (247),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 79/197 (41%), Positives = 133/197 (68%), Gaps = 10/197 (5%)

Query  60   LSFLPAMLLMMTSFTRIIIVLSLLRQALGTATTPPNQVLVGLAMFLTFFVMSPV---LDR  116
            +S++P +L++ T+F +I + L + R+A+G    PPN  L G+A+  T FVM+PV   +++
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  117  AYTDGYKPFSDGSMPMEQAVQRGV-APFKTFMLKQTRETDLA-LFAKISKAAPMQGPEDV  174
               D   P+  G+    QA  R V  P++ FM ++T    +A L+ +  +  P + +++ 
Sbjct  61   RVHD--HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA  118

Query  175  P---LSLLVPAFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvspstvsLPFK  231
            +   L L +PAFV SEL++GF+IGF I+IPF++ID++V+++L+++GM MVSP T+SLP+K
Sbjct  119  SKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLK  178

Query  232  LMLFVLVDGWQLLIGSL  248
            L+LFV+V GW  L++SL
Sbjct  179  LLLFVMVSGWSRLLDSL  195

316) fliP in NC_006348


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 70.0 bits (246),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 73/173 (43%), Positives = 117/173 (68%), Gaps = 10/173 (5%)

Query  6    RQAIGTASTPPNQVLVGLALFLTLFVMSPV---LDRAYNDAYKPFSEGTLQMDQAVQRGT  62
            R+AIG    PPN  L G+AL  T+FVM+PV   +++  +D   P+  G  +  QA  R  
Sbjct  25   RNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHD--HPLELGNTEKLQASARTV  82

Query  63   -APFKAFMLKQTRETDLA-LFAKISKAAPMQGPEDVP---LSLLVPAFVTSELKTGFQIG  117
              P++ FM ++T    +A L+ +  +  P + +++ +   L L +PAFV SEL++GF+IG
Sbjct  83   IEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFVLSELQAGFEIG  142

Query  118  FTIFIPFLIIDmvvasvlmsmgmmmvsPATVSLPFKLMLFVLVDGWQLLIGSL  170
            F I+IPF++ID++V+++L+++GM MVSP T+SLP+KL+LFV+V GW  L++SL
Sbjct  143  FLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRLLDSL  195

317) fliP in NC_010084


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 68.7 bits (241),  Expect = 3e-13, Method: Compositional matrix adjust.
 Identities = 79/197 (41%), Positives = 132/197 (68%), Gaps = 10/197 (5%)

Query  60   LSFLPAMVLMMTSFTRIIIVLSLLRQALGTATTPPNQVLVGLALFLTFFVMSPV---LDR  116
            +S++P ++++ T+F +I + L + R+A+G    PPN  L G+AL  T FVM+PV   +++
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  117  AYTDGYKPFSDGTLPMEQAVQRGV-APFKGFMLKQTRETDLA-LFAKISKAAPMQGPEDV  174
               D   P+  G     QA  R V  P++ FM ++T    +A L+ +  +  P + +++ 
Sbjct  61   RVHD--HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA  118

Query  175  P---LSLLVPAFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvspstvsLPFK  231
            +   L L +PAFV SEL++GF+IGF I+IPF++ID++V+++L+++GM MVSP T+SLP+K
Sbjct  119  SKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLK  178

Query  232  LMLFVLVDGWQLLIGSL  248
            L+LFV+V GW  L++SL
Sbjct  179  LLLFVMVSGWSRLLDSL  195

318) fliP in NC_010804


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 68.7 bits (241),  Expect = 3e-13, Method: Compositional matrix adjust.
 Identities = 79/197 (41%), Positives = 132/197 (68%), Gaps = 10/197 (5%)

Query  60   LSFLPAMVLMMTSFTRIIIVLSLLRQALGTATTPPNQVLVGLALFLTFFVMSPV---LDR  116
            +S++P ++++ T+F +I + L + R+A+G    PPN  L G+AL  T FVM+PV   +++
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  117  AYTDGYKPFSDGTLPMEQAVQRGV-APFKGFMLKQTRETDLA-LFAKISKAAPMQGPEDV  174
               D   P+  G     QA  R V  P++ FM ++T    +A L+ +  +  P + +++ 
Sbjct  61   RVHD--HPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA  118

Query  175  P---LSLLVPAFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvspstvsLPFK  231
            +   L L +PAFV SEL++GF+IGF I+IPF++ID++V+++L+++GM MVSP T+SLP+K
Sbjct  119  SKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLK  178

Query  232  LMLFVLVDGWQLLIGSL  248
            L+LFV+V GW  L++SL
Sbjct  179  LLLFVMVSGWSRLLDSL  195

319) fliP in NC_009494


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 65.5 bits (229),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 82/204 (41%), Positives = 140/204 (69%), Gaps = 25/204 (12%)

Query  55   LTVLPGLLMAMTSFTRIIIVLSILRQAIGMAQTPTNQILIGIALFMTYFVMSPVFNKINE  114
            ++++P LL+  T+F +I + L I R+AIG+ Q P N  L GIAL  T FVM+PV +    
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHE---  57

Query  115  TAIQPYMNERI-DFSLALSNAQK----------PLRQFMLNQTRKNDLS-LFEKFAHNVP  162
                  M++R+ D +L L+N++K          PL++FM  +T  + ++ L+++  +  P
Sbjct  58   ------MQQRVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWP  111

Query  163  KSL-DEIPMSVL---IPAFITSELKTAfqigfilflpfliidlVVSSVLMAMGMMMLSPL  218
            K + D+ + + L   IPAF+ SEL+++F+IGF++++PF++IDL+VS++L+A+GM M+SP+
Sbjct  112  KEMADQASKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPM  171

Query  219  IISLPFKIMLFVMVDGWTLVLGSL  242
             +SLP+K++LFVMV GW+ +L+SL
Sbjct  172  TLSLPLKLLLFVMVSGWSRLLDSL  195

320) fliP in NC_014125


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 65.5 bits (229),  Expect = 3e-12, Method: Compositional matrix adjust.
 Identities = 82/204 (41%), Positives = 140/204 (69%), Gaps = 25/204 (12%)

Query  55   LTVLPGLLMAMTSFTRIIIVLSILRQAIGMAQTPTNQILIGIALFMTYFVMSPVFNKINE  114
            ++++P LL+  T+F +I + L I R+AIG+ Q P N  L GIAL  T FVM+PV +    
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHE---  57

Query  115  TAIQPYMNERI-DFSLALSNAQK----------PLRQFMLNQTRKNDLS-LFEKFAHNVP  162
                  M++R+ D +L L+N++K          PL++FM  +T  + ++ L+++  +  P
Sbjct  58   ------MQQRVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWP  111

Query  163  KSL-DEIPMSVL---IPAFITSELKTAfqigfilflpfliidlVVSSVLMAMGMMMLSPL  218
            K + D+ + + L   IPAF+ SEL+++F+IGF++++PF++IDL+VS++L+A+GM M+SP+
Sbjct  112  KEMADQASKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPM  171

Query  219  IISLPFKIMLFVMVDGWTLVLGSL  242
             +SLP+K++LFVMV GW+ +L+SL
Sbjct  172  TLSLPLKLLLFVMVSGWSRLLDSL  195

321) lp12_1727 in NC_016811


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 65.5 bits (229),  Expect = 3e-12, Method: Compositional matrix adjust.
 Identities = 82/204 (41%), Positives = 140/204 (69%), Gaps = 25/204 (12%)

Query  55   LTVLPGLLMAMTSFTRIIIVLSILRQAIGMAQTPTNQILIGIALFMTYFVMSPVFNKINE  114
            ++++P LL+  T+F +I + L I R+AIG+ Q P N  L GIAL  T FVM+PV +    
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHE---  57

Query  115  TAIQPYMNERI-DFSLALSNAQK----------PLRQFMLNQTRKNDLS-LFEKFAHNVP  162
                  M++R+ D +L L+N++K          PL++FM  +T  + ++ L+++  +  P
Sbjct  58   ------MQQRVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWP  111

Query  163  KSL-DEIPMSVL---IPAFITSELKTAfqigfilflpfliidlVVSSVLMAMGMMMLSPL  218
            K + D+ + + L   IPAF+ SEL+++F+IGF++++PF++IDL+VS++L+A+GM M+SP+
Sbjct  112  KEMADQASKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPM  171

Query  219  IISLPFKIMLFVMVDGWTLVLGSL  242
             +SLP+K++LFVMV GW+ +L+SL
Sbjct  172  TLSLPLKLLLFVMVSGWSRLLDSL  195

322) LPE509_01400 in NC_020521


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 65.5 bits (229),  Expect = 3e-12, Method: Compositional matrix adjust.
 Identities = 82/204 (41%), Positives = 140/204 (69%), Gaps = 25/204 (12%)

Query  55   LTVLPGLLMAMTSFTRIIIVLSILRQAIGMAQTPTNQILIGIALFMTYFVMSPVFNKINE  114
            ++++P LL+  T+F +I + L I R+AIG+ Q P N  L GIAL  T FVM+PV +    
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHE---  57

Query  115  TAIQPYMNERI-DFSLALSNAQK----------PLRQFMLNQTRKNDLS-LFEKFAHNVP  162
                  M++R+ D +L L+N++K          PL++FM  +T  + ++ L+++  +  P
Sbjct  58   ------MQQRVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWP  111

Query  163  KSL-DEIPMSVL---IPAFITSELKTAfqigfilflpfliidlVVSSVLMAMGMMMLSPL  218
            K + D+ + + L   IPAF+ SEL+++F+IGF++++PF++IDL+VS++L+A+GM M+SP+
Sbjct  112  KEMADQASKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPM  171

Query  219  IISLPFKIMLFVMVDGWTLVLGSL  242
             +SLP+K++LFVMV GW+ +L+SL
Sbjct  172  TLSLPLKLLLFVMVSGWSRLLDSL  195

323) fliP in NC_002942


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 65.5 bits (229),  Expect = 3e-12, Method: Compositional matrix adjust.
 Identities = 82/204 (41%), Positives = 140/204 (69%), Gaps = 25/204 (12%)

Query  55   LTVLPGLLMAMTSFTRIIIVLSILRQAIGMAQTPTNQILIGIALFMTYFVMSPVFNKINE  114
            ++++P LL+  T+F +I + L I R+AIG+ Q P N  L GIAL  T FVM+PV +    
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHE---  57

Query  115  TAIQPYMNERI-DFSLALSNAQK----------PLRQFMLNQTRKNDLS-LFEKFAHNVP  162
                  M++R+ D +L L+N++K          PL++FM  +T  + ++ L+++  +  P
Sbjct  58   ------MQQRVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWP  111

Query  163  KSL-DEIPMSVL---IPAFITSELKTAfqigfilflpfliidlVVSSVLMAMGMMMLSPL  218
            K + D+ + + L   IPAF+ SEL+++F+IGF++++PF++IDL+VS++L+A+GM M+SP+
Sbjct  112  KEMADQASKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPM  171

Query  219  IISLPFKIMLFVMVDGWTLVLGSL  242
             +SLP+K++LFVMV GW+ +L+SL
Sbjct  172  TLSLPLKLLLFVMVSGWSRLLDSL  195

324) fliP in NC_021350


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 65.5 bits (229),  Expect = 3e-12, Method: Compositional matrix adjust.
 Identities = 82/204 (41%), Positives = 140/204 (69%), Gaps = 25/204 (12%)

Query  55   LTVLPGLLMAMTSFTRIIIVLSILRQAIGMAQTPTNQILIGIALFMTYFVMSPVFNKINE  114
            ++++P LL+  T+F +I + L I R+AIG+ Q P N  L GIAL  T FVM+PV +    
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHE---  57

Query  115  TAIQPYMNERI-DFSLALSNAQK----------PLRQFMLNQTRKNDLS-LFEKFAHNVP  162
                  M++R+ D +L L+N++K          PL++FM  +T  + ++ L+++  +  P
Sbjct  58   ------MQQRVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWP  111

Query  163  KSL-DEIPMSVL---IPAFITSELKTAfqigfilflpfliidlVVSSVLMAMGMMMLSPL  218
            K + D+ + + L   IPAF+ SEL+++F+IGF++++PF++IDL+VS++L+A+GM M+SP+
Sbjct  112  KEMADQASKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPM  171

Query  219  IISLPFKIMLFVMVDGWTLVLGSL  242
             +SLP+K++LFVMV GW+ +L+SL
Sbjct  172  TLSLPLKLLLFVMVSGWSRLLDSL  195

325) fliP in NC_008699


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 65.0 bits (227),  Expect = 4e-12, Method: Compositional matrix adjust.
 Identities = 89/189 (48%), Positives = 128/189 (68%), Gaps = 6/189 (3%)

Query  82   CTAFTKIFVVLGLTRNALGLQQTPPNQVLAGLALFLSLFVMGPVLSDINE-VGLQPY-LN  139
            CTAF KI + L +TRNA+G+QQ PPN  L G+AL  ++FVM+PV  ++++ V  +P  L 
Sbjct  11   CTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELG  70

Query  140  GDKTTSVAIQDGIEPLRDFMLDNTDDDELMLLTNVAGRDLPEDRADVSTAT----LIPAF  195
                   + +  IEPL+ FM  NTD D +  L + + R  P + AD ++       IPAF
Sbjct  71   NTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAF  130

Query  196  VLTELKQAfiigfiifipflviDLVvsgalmalgmmmmppvmvslpFKLLLFVLVDGWAL  255
            VL+EL+ +F IGF+I+IPF+VIDL+VS  L+ALGM M++P+ +SLP+KLLLFV+V GW+ 
Sbjct  131  VLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSR  190

Query  256  VIKSLVASY  264
            ++ SL  SY
Sbjct  191  LLDSLFYSY  199

326) fliP in NC_008048


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 64.7 bits (226),  Expect = 4e-12, Method: Compositional matrix adjust.
 Identities = 79/185 (43%), Positives = 125/185 (68%), Gaps = 12/185 (6%)

Query  75   FTRIIIVLSILRHALGLQQTPPNQvlvglslflslfvMQPVISEVN-RVAIEPYGQEQID  133
            F +I + L I R+A+G+QQ PPN  L G++L  ++FVM PV  E++ RV  +P    + +
Sbjct  14   FLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGNTE  73

Query  134  IGEAVSRSG-DALHGFMMKQTRKTDLMMFAKIARAPAYASPKDVP-----FSILL--PAF  185
              +A +R+  ++L+ FM   TR+TD  + A +        PK+++       +LL  PAF
Sbjct  74   KLQASARTVIEPLQRFM---TRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAF  130

Query  186  VTSELKTAFQIGFLIFLPFLVIDLIVasalmslgmmmlsPTIISMPFKLLLFVLVDGWAL  245
            V SEL+++F+IGFLI++PF+VIDLIV++ L++LGM M+SP  +S+P+KLLLFV+V GW+ 
Sbjct  131  VLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSR  190

Query  246  TMGSL  250
             ++SL
Sbjct  191  LLDSL  195

327) M446_5157 in NC_010511


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 64.2 bits (224),  Expect = 8e-12, Method: Compositional matrix adjust.
 Identities = 80/199 (41%), Positives = 136/199 (69%), Gaps = 6/199 (3%)

Query  89   LALAPSVLVMATAFTRIVVVLSILRSALGTQTAPPNAVIVSLALFLTAFVMAPTARE-AY  147
            ++L P +L++ TAF +I + L I R+A+G Q  PPN  + ++AL  T FVMAP A+E   
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  148  RTGIEPLVAGQISQSQAFERAS-QPFKAFMLRSVREKDLRLFLDLSNA--PRPATPEAVG  204
            R   +PL  G+  + QA  R+  +P++ FM R+     +  +LD ++   P+  + +A  
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  205  LEIL--TPAFMISELRRAfeigfllfipfliidlVVASVLMSVGMMMLPPATVALPFKLI  262
             ++L   PAF++SEL+ +FEIGFL++IPF++IDL+V+++L+++GM M++P T++LP+KL+
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  263  FFVLVDGWTLVAGSLVQSY  281
            +FV+V GW+ + +SL  SY
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

328) Afer_0155 in NC_013124


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 63.1 bits (220),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 77/189 (41%), Positives = 127/189 (68%), Gaps = 7/189 (3%)

Query  37   LSLAPTLLVLFTGFVEIVVVLSITRNALGLSTTPPNQVLAGLALFLSLFVMAPTLGIVEH  96
            +SL P LL++ T+F+ I + L ITRNA+G+   PPN  L G+AL  ++FVMAP    +++
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  97   QAVLPYLH-GHISAVVALDRAE-GPIKLWMLRHTRTQELA-LFDVVTH----Hagvapaa  149
            +     L+ G+   + A  R+   P++  M R+T  + +A L+D   +    + +  ++ 
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  150  apldavvpaFILSELHSAFVMGFIIYVPFLVIDlvvssvlmslgmmmlPPTLVSLPFKLL  209
              L   +PAF+LSEL+++F +GF+IY+PF+VIDL+VS++L++LGM M++P  +SLP+KLL
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  210  LFVLVDGWT  218
            LFV+V GW+
Sbjct  181  LFVMVSGWS  189

329) Mrad2831_5050 in NC_010505


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 60.8 bits (211),  Expect = 7e-11, Method: Compositional matrix adjust.
 Identities = 80/199 (41%), Positives = 129/199 (65%), Gaps = 6/199 (3%)

Query  61   LAVAPSVLVMATAFTRIVVVLSILRSALGTQTAPPTAVLVSLALFLTAFVMAPTGRA-AY  119
            +++ P +L++ TAF +I + L I R+A+G Q  PP   L ++AL  T FVMAP ++    
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  120  SAGIEPLIAGRITQAQAFERAS-APFKTFMLRNVREKDLKLFLDLAKVPAPKGPEDVG--  176
                +PL  G   + QA  R+   P++ FM RN     +  +LD ++   PK   D +  
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  177  --LEIVTPAFMISELRRAfeigfllfipfliidlVVASVLMAVGMMMVPPATVALPFKLI  234
              L +  PAF++SEL+ +FEIGFL++IPF++IDL+V+++L+A+GM MV+P T++LP+KL+
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  235  FFVLVDGWTLVAGSLVQSY  253
            +FV+V GW+ + +SL  SY
Sbjct  181  LFVMVSGWSRLLDSLFYSY  199

330) fliP in NC_009049


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 59.7 bits (207),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 84/201 (42%), Positives = 133/201 (67%), Gaps = 11/201 (5%)

Query  46   LSLVPALAMMITCFPFIVTVLSIL--RQAIGLQQAPPNMLIVSLALFLTWYVMDPVFTEA  103
            +SL+P L  +I C +F+   +++L  R+AIG+QQ PPNM + ++AL  T +VM PV  E 
Sbjct  1    MSLIPFL--LIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEM  58

Query  104  WTRGIG-PLTRNELDLPQALAAAAV-PFRGFMTGRIDPDTLAAL----QALRPGP-AAPP  156
              R  + PL   + +  QA A + + P++ FMT   DPD +A L    Q ++P   A  +
Sbjct  59   QQRVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA  118

Query  157  SEAsfsvlvpsfllsEIQRAFEIGFLIYLPFLIIDlvvsavlmsmgmmmvppavvsmpFK  216
            S   + + +P+F+LSE+Q +FEIGFLIY+PF++IDL+VS +L+++GM MV+P  +S+P+K
Sbjct  119  SKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLK  178

Query  217  LAFFVVADGWSLISGALVRSY  237
            L +FV+  GWS + ++L  SY
Sbjct  179  LLLFVMVSGWSRLLDSLFYSY  199

331) fliP1 in NC_007493


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 54.5 bits (187),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 84/201 (42%), Positives = 133/201 (67%), Gaps = 11/201 (5%)

Query  46   LSLVPALAMMITCFPFIVTVLSIL--RQAIGLQQAPPNMLIVSLALFLTWYVMDPVFTEA  103
            +SL+P L  +I C +F+   +++L  R+AIG+QQ PPNM + ++AL  T +VM PV  E 
Sbjct  1    MSLIPFL--LIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEM  58

Query  104  WTRGIG-PLTRNELDLPQALAAAAV-PFRGFMTGRIDPDTLAAL----QALRPGP-AApp  156
              R  + PL   + +  QA A + + P++ FMT   DPD +A L    Q ++P   A  +
Sbjct  59   QQRVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQA  118

Query  157  sevsfsvlvpsfllseIQRAFEIGFLIYLPFLIIDlvvsavlmsmgmmmvppavvsmpFK  216
            S   + + +P+F+LSE+Q +FEIGFLIY+PF++IDL+VS +L+++GM MV+P  +S+P+K
Sbjct  119  SKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLK  178

Query  217  LAFFVVADGWSLISGALVRSY  237
            L +FV+  GWS + ++L  SY
Sbjct  179  LLLFVMVSGWSRLLDSLFYSY  199

332) fliP in NC_011963


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 53.7 bits (184),  Expect = 9e-09, Method: Compositional matrix adjust.
 Identities = 79/193 (41%), Positives = 127/193 (66%), Gaps = 9/193 (4%)

Query  54   MMITCFPFIVTVLSIL--RQAIGLQQAPPNMLIVSLALFLTWYVMDPVFTEAWTKGIA-P  110
            ++I C +F+   +++L  R+AIG+QQ PPNM + ++AL  T +VM PV  E   +    P
Sbjct  7    LLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHP  66

Query  111  LTRNELDLPQALAAAAI-PFRSFMAGRIDPDTLAAL----QALRPGP-AAppsevsfsvl  164
            L   + +  QA A + I P++ FM+   DPD +A L    Q ++P   A  +S   + + 
Sbjct  67   LELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLA  126

Query  165  vpsfllseIQRAFEIGFLIYLPFLIIDlvvsavlmsmgmmmvppavvsmpFKLAFFVVAD  224
            +P+F+LSE+Q +FEIGFLIY+PF++IDL+VS +L+++GM MV+P  +S+P+KL +FV+  
Sbjct  127  IPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVS  186

Query  225  GWSLISGALVRSY  237
            GWS + ++L  SY
Sbjct  187  GWSRLLDSLFYSY  199

333) BC1002_3015 in NC_014117


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 52.1 bits (178),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 79/195 (41%), Positives = 129/195 (67%), Gaps = 6/195 (3%)

Query  76   LSFLPAMVLMMTSFTRIVIVLSLLRQALGTTTTPPNQVLVGLALFLTFFVMSPVLDKAYN  135
            +S++P ++++ T+F +I + L + R+A+G    PPN  L G+AL  T FVM+PV +   +
Sbjct  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60

Query  136  EGY-KPFSEGTLPMDQAVSRGV-APFKTFMLRQTRESDLA-LFARISHAAPMQGPEDVP-  191
                 P+  G     QA +R V  P++ FM R+T    +A L+    +  P + +++ + 
Sbjct  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120

Query  192  --LSLLVPSFVTSELKtgftigftifiPFLIIDmvvasvlmsmgmmmvsPATISLPFKLM  249
              L L +P+FV SEL++GF IGF I+IPF++ID++V+++L+++GM MVSP T+SLP+KL+
Sbjct  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLL  180

Query  250  LFVLVDGWQLLLGSL  264
            LFV+V GW  LL+SL
Sbjct  181  LFVMVSGWSRLLDSL  195

334) Anae109_0745 in NC_009675


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 31.6 bits (100),  Expect = 0.039, Method: Compositional matrix adjust.
 Identities = 83/188 (45%), Positives = 127/188 (68%), Gaps = 2/188 (1%)

Query  36   TSFLKIVVVLSIARSALGAPQVPPNtavtglalvltalvMAPvgeravaamraapaghgv  95
            T+FLKI + L I+R+A+G  QVPPN A+ G+AL  T +VMAPV++     ++  P   G 
Sbjct  12   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLELGN  71

Query  96   aGTLAQLERGS-DPLRGfllrfaraddraafvdvarrlrGPDAAPPAER-DLAVLAPAFV  153
            +  L    R   +PL+ F+ R + +D  A ++D ++R++  + A  A + DL +  PAFV
Sbjct  72   TEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAIPAFV  131

Query  154  VSELRRAFTIGflvfvpflvvdlvvsnvllalGLTQLSPTSIALPFKLLLFVAVDGWKLL  213
            +SEL+ +F IGFL+++PF+V+DL+VSN+LLALG+  +SP +++LP+KLLLFV V GW  L
Sbjct  132  LSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSGWSRL  191

Query  214  ARALALSY  221
              +L  SY
Sbjct  192  LDSLFYSY  199

335) Thivi_0368 in NC_018012


> NC_004578_P1|41|G32|162533077|NP_791222.3|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31844..32446|hrcR|PSPTO_1395|type 
III secretion protein HrcR
Length=200

 Score = 30.6 bits (96),  Expect = 0.077, Method: Compositional matrix adjust.
 Identities = 79/194 (41%), Positives = 128/194 (66%), Gaps = 19/194 (9%)

Query  63   SFTRIIIVLGILRQGLGTSQTPSNQIllglalfltlFVMAPVFQEIYDTAAIPYMEEKLG  122
            +F +I + L I R+++G  Q P+N  L G+AL  T+FVMAPV +E+ +      +E  LG
Sbjct  13   AFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQRVHDHPLE--LG  70

Query  123  TEEALGKA----IKPLRTFMLAQTRETDLSLFAE-------IRGLDGFDSPDAIPLNLLV  171
              E L  +    I PL+ FM   TR+TD  + A+       ++  +  D +    L L +
Sbjct  71   NTEKLQASARTVIEPLQRFM---TRNTDPDVVAHLLDNTQRMWPKEMADQASKNDLLLAI  127

Query  172  PAFVISELKTAfqigflilipfliiDlvvasvlmsmgmmmlspmIISLPFKIMLFVLVDG  231
            PAFV+SEL+++F+IGFLI IPF++IDL+V+++L+++GM M+SPM +SLP+K++LFV+V G
Sbjct  128  PAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVMVSG  187

Query  232  WSLVMGTLAQSFFT  245
            WS ++++L   F++
Sbjct  188  WSRLLDSL---FYS  198