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Homologs of escT gene of JQ747540

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) escT
( YP_003232140.1 )

T3SS structure protein EscT

NC_013361
(Escherichia coli 11368)

6e-80

2) escT
( YP_003223488.1 )

T3SS structure protein EscT

NC_013353
(Escherichia coli 12009)

6e-80

3) escT
( YP_003236101.1 )

putative T3SS structure protein EscT

NC_013364
(Escherichia coli 11128)

9e-80

4) escT
( YP_003501887.1 )

escT

NC_013941
(Escherichia coli CB9615)

9e-80

5) epaR
( YP_002273177.1 )

type III secretion apparatus protein SpaR/YscT/HrcT

NC_011353
(Escherichia coli EC4115)

9e-80

6) escT
( NP_290281.1 )

hypothetical protein

NC_002655
(Escherichia coli EDL933)

9e-80

7) ECO55CA74_21280
( YP_006161361.1 )

escT

NC_017656
(Escherichia coli RM12579)

9e-80

8) ECs4581
( NP_312608.1 )

EscT

NC_002695
(Escherichia coli Sakai)

9e-80

9) escT
( YP_003080493.1 )

LEE-encoded type III secretion system factor

NC_013008
(Escherichia coli TW14359)

9e-80

10) CDCO157_4316
( YP_006315181.1 )

protein EscT

NC_017906
(Escherichia coli Xuzhou21)

9e-80

11) escT
( YP_002331423.1 )

T3SS structure protein EscT

NC_011601
(Escherichia coli E2348/69)

2e-79

12) escT
( YP_003366515.1 )

T3SS structural protein EscT

NC_013716
(Citrobacter rodentium ICC168)

3e-79

13) SBOV14171
( YP_008505288.1 )

type III secretion apparatus protein SpaR/YscT/HrcT

NC_022241
(Salmonella enterica 3114)

2e-24

14) epaR
( YP_002040672.1 )

type III secretion apparatus protein SpaR/YscT/HrcT

NC_011080
(Salmonella enterica SL254)

2e-24

15) ssaT
( YP_008480908.1 )

putative type III secretion protein

NC_022221
(Salmonella enterica CDC1983-67)

5e-24

16) I137_05710
( YP_008380652.1 )

type III secretion system protein SsaT

NC_021984
(Salmonella enterica S06004)

5e-24

17) SEEH1578_16340
( YP_008247327.1 )

type III secretion system protein SsaT

NC_021810
(Salmonella enterica 41578)

1e-23

18) CFSAN002069_01895
( YP_008249239.1 )

type III secretion system protein SsaT

NC_021812
(Salmonella enterica CFSAN002069)

1e-23

19) ssaT
( YP_002243724.1 )

type III secretion protein

NC_011294
(Salmonella enterica P125109)

1e-23

20) epaR
( YP_002045424.1 )

type III secretion apparatus protein SpaR/YscT/HrcT

NC_011083
(Salmonella enterica SL476)

1e-23

21) ssaT
( YP_005212446.1 )

putative type III secretion protein

NC_016831
(Salmonella enterica RKS5078)

6e-24

• Sequence Alignments

1) escT in NC_013353


> JQ747540|41|G37|397782024|AFO66402.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|+|35975..36751|escT|SESS1635_03849|putative 
LEE-encoded type III secretion system factor
Length=258

 Score =  290 bits (1084),  Expect = 6e-80, Method: Compositional matrix adjust.
 Identities = 183/258 (71%), Positives = 230/258 (90%), Gaps = 0/258 (0%)

Query  1    MNEIMTVIVSSFFCILRPLGMFIILPIFSTGVLLSNFIRNSIMIAFTLPIIVENYTFSEK  60
            MN+I+  +VS FFCILRPLG FII+P+FS GVLL+NFIRNS++I ++LPI+++NY FSE+
Sbjct  1    MNDIINAMVSMFFCILRPLGAFIIFPLFSMGVLLTNFIRNSVIICLALPIFLQNYNFSER  60

Query  61   LPSGIFQLTGIVLKEISIGFFIGLSFTILFWAIDAAGQIIDTLRGSTissifnpsisdss  120
            LP GI+ L+ I +KEI IGFFIGLSFTI+FWAIDAAGQIIDTLRGSTISSIFNP+ISDSS
Sbjct  61   LPVGILSLANIAFKEIIIGFFIGLSFTIVFWAIDAAGQIIDTLRGSTISSIFNPAISDSS  120

Query  121  siTGVILYQFITVIFVIHGGIQSVLDKLYLSYEILPLQADIAFNRALVDFLFSLWDSFIK  180
            S+TGV+LYQF+TVIF+I GG+QSVL+ LY SYE++PL++ +++ +++V F FSLW+SFI 
Sbjct  121  SVTGVLLYQFVTVIFIISGGLQSVLNVLYNSYELFPLDSVLTIRWSVVKFAFSLWESFIS  180

Query  181  LMLSFSIPMIIGIFLCDMGFGFLNKTAPQLNVFTLSLPVKSLIAIFILLLVIHVFPDFIT  240
            LMLSFSIPM+IGIFLCDMGFGFLNKTAPQLNVFTLSLPVKS +++FILLLVIHVFP+FI 
Sbjct  181  LMLSFSIPMVIGIFLCDMGFGFLNKTAPQLNVFTLSLPVKSCVSVFILLLVIHVFPEFIN  240

Query  241  ANIHSDIIDRSLPSMINE  258
            A I++DI+   L  +++E
Sbjct  241  AGINADIFSSLLRDLLHE  258

2) escT in NC_013361


> JQ747540|41|G37|397782024|AFO66402.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|+|35975..36751|escT|SESS1635_03849|putative 
LEE-encoded type III secretion system factor
Length=258

 Score =  290 bits (1084),  Expect = 6e-80, Method: Compositional matrix adjust.
 Identities = 183/258 (71%), Positives = 230/258 (90%), Gaps = 0/258 (0%)

Query  1    MNEIMTVIVSSFFCILRPLGMFIILPIFSTGVLLSNFIRNSIMIAFTLPIIVENYTFSEK  60
            MN+I+  +VS FFCILRPLG FII+P+FS GVLL+NFIRNS++I ++LPI+++NY FSE+
Sbjct  1    MNDIINAMVSMFFCILRPLGAFIIFPLFSMGVLLTNFIRNSVIICLALPIFLQNYNFSER  60

Query  61   LPSGIFQLTGIVLKEISIGFFIGLSFTILFWAIDAAGQIIDTLRGSTissifnpsisdss  120
            LP GI+ L+ I +KEI IGFFIGLSFTI+FWAIDAAGQIIDTLRGSTISSIFNP+ISDSS
Sbjct  61   LPVGILSLANIAFKEIIIGFFIGLSFTIVFWAIDAAGQIIDTLRGSTISSIFNPAISDSS  120

Query  121  siTGVILYQFITVIFVIHGGIQSVLDKLYLSYEILPLQADIAFNRALVDFLFSLWDSFIK  180
            S+TGV+LYQF+TVIF+I GG+QSVL+ LY SYE++PL++ +++ +++V F FSLW+SFI 
Sbjct  121  SVTGVLLYQFVTVIFIISGGLQSVLNVLYNSYELFPLDSVLTIRWSVVKFAFSLWESFIS  180

Query  181  LMLSFSIPMIIGIFLCDMGFGFLNKTAPQLNVFTLSLPVKSLIAIFILLLVIHVFPDFIT  240
            LMLSFSIPM+IGIFLCDMGFGFLNKTAPQLNVFTLSLPVKS +++FILLLVIHVFP+FI 
Sbjct  181  LMLSFSIPMVIGIFLCDMGFGFLNKTAPQLNVFTLSLPVKSCVSVFILLLVIHVFPEFIN  240

Query  241  ANIHSDIIDRSLPSMINE  258
            A I++DI+   L  +++E
Sbjct  241  AGINADIFSSLLRDLLHE  258

3) escT in NC_013364


> JQ747540|41|G37|397782024|AFO66402.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|+|35975..36751|escT|SESS1635_03849|putative 
LEE-encoded type III secretion system factor
Length=258

 Score =  289 bits (1081),  Expect = 9e-80, Method: Compositional matrix adjust.
 Identities = 179/258 (70%), Positives = 231/258 (90%), Gaps = 0/258 (0%)

Query  1    MNEIMTVIVSSFYCILRPLGMFIILPIFSTGVLLSNFIRNSIMIAFTLPIIVENYTFSEK  60
            MN+I+  +VS F+CILRPLG FII+P+FS GVLL+NFIRNS++I ++LPI+++NY FSE+
Sbjct  1    MNDIINAMVSMFFCILRPLGAFIIFPLFSMGVLLTNFIRNSVIICLALPIFLQNYNFSER  60

Query  61   LPSGIFQLTGIALKEISIGFFIGLSFTILFWAIDAAGQIIDTLRGSTissifnpsisdss  120
            LP GI+ L+ IA+KEI IGFFIGLSFTI+FWAIDAAGQIIDTLRGSTISSIFNP+ISDSS
Sbjct  61   LPVGILSLANIAFKEIIIGFFIGLSFTIVFWAIDAAGQIIDTLRGSTISSIFNPAISDSS  120

Query  121  siTGVILYQFISVIFVIHGGIQSILDKLYLSYEILPLQADIAFNRALIDFLFSLWDSFIK  180
            S+TGV+LYQF++VIF+I GG+QS+L+ LY SYE++PL++ +++ ++++ F FSLW+SFI 
Sbjct  121  SVTGVLLYQFVTVIFIISGGLQSVLNVLYNSYELFPLDSVLTIRWSVVKFAFSLWESFIS  180

Query  181  LMLSFSVPMIIGIFLCDMGFGFLNKTAPQLNVFTLSLPVKSLIAIFILLLVIHVFPDFIT  240
            LMLSFS+PM+IGIFLCDMGFGFLNKTAPQLNVFTLSLPVKS +++FILLLVIHVFP+FI 
Sbjct  181  LMLSFSIPMVIGIFLCDMGFGFLNKTAPQLNVFTLSLPVKSCVSVFILLLVIHVFPEFIN  240

Query  241  ANIHSDIIDRSLPSMINE  258
            A I++DI+   L  +++E
Sbjct  241  AGINADIFSSLLRDLLHE  258

4) epaR in NC_011353


> JQ747540|41|G37|397782024|AFO66402.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|+|35975..36751|escT|SESS1635_03849|putative 
LEE-encoded type III secretion system factor
Length=258

 Score =  289 bits (1081),  Expect = 9e-80, Method: Compositional matrix adjust.
 Identities = 179/258 (70%), Positives = 231/258 (90%), Gaps = 0/258 (0%)

Query  1    MNEIMTVIVSSFYCILRPLGMFIILPIFSTGVLLSNFIRNSIMIAFTLPIIVENYTFSEK  60
            MN+I+  +VS F+CILRPLG FII+P+FS GVLL+NFIRNS++I ++LPI+++NY FSE+
Sbjct  1    MNDIINAMVSMFFCILRPLGAFIIFPLFSMGVLLTNFIRNSVIICLALPIFLQNYNFSER  60

Query  61   LPSGIFQLTGIALKEISIGFFIGLSFTILFWAIDAAGQIIDTLRGSTissifnpsisdss  120
            LP GI+ L+ IA+KEI IGFFIGLSFTI+FWAIDAAGQIIDTLRGSTISSIFNP+ISDSS
Sbjct  61   LPVGILSLANIAFKEIIIGFFIGLSFTIVFWAIDAAGQIIDTLRGSTISSIFNPAISDSS  120

Query  121  siTGVILYQFISVIFVIHGGIQSILDKLYLSYEILPLQADIAFNRALIDFLFSLWDSFIK  180
            S+TGV+LYQF++VIF+I GG+QS+L+ LY SYE++PL++ +++ ++++ F FSLW+SFI 
Sbjct  121  SVTGVLLYQFVTVIFIISGGLQSVLNVLYNSYELFPLDSVLTIRWSVVKFAFSLWESFIS  180

Query  181  LMLSFSVPMIIGIFLCDMGFGFLNKTAPQLNVFTLSLPVKSLIAIFILLLVIHVFPDFIT  240
            LMLSFS+PM+IGIFLCDMGFGFLNKTAPQLNVFTLSLPVKS +++FILLLVIHVFP+FI 
Sbjct  181  LMLSFSIPMVIGIFLCDMGFGFLNKTAPQLNVFTLSLPVKSCVSVFILLLVIHVFPEFIN  240

Query  241  ANIHSDIIDRSLPSMINE  258
            A I++DI+   L  +++E
Sbjct  241  AGINADIFSSLLRDLLHE  258

5) escT in NC_002655


> JQ747540|41|G37|397782024|AFO66402.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|+|35975..36751|escT|SESS1635_03849|putative 
LEE-encoded type III secretion system factor
Length=258

 Score =  289 bits (1081),  Expect = 9e-80, Method: Compositional matrix adjust.
 Identities = 179/258 (70%), Positives = 231/258 (90%), Gaps = 0/258 (0%)

Query  1    MNEIMTVIVSSFYCILRPLGMFIILPIFSTGVLLSNFIRNSIMIAFTLPIIVENYTFSEK  60
            MN+I+  +VS F+CILRPLG FII+P+FS GVLL+NFIRNS++I ++LPI+++NY FSE+
Sbjct  1    MNDIINAMVSMFFCILRPLGAFIIFPLFSMGVLLTNFIRNSVIICLALPIFLQNYNFSER  60

Query  61   LPSGIFQLTGIALKEISIGFFIGLSFTILFWAIDAAGQIIDTLRGSTissifnpsisdss  120
            LP GI+ L+ IA+KEI IGFFIGLSFTI+FWAIDAAGQIIDTLRGSTISSIFNP+ISDSS
Sbjct  61   LPVGILSLANIAFKEIIIGFFIGLSFTIVFWAIDAAGQIIDTLRGSTISSIFNPAISDSS  120

Query  121  siTGVILYQFISVIFVIHGGIQSILDKLYLSYEILPLQADIAFNRALIDFLFSLWDSFIK  180
            S+TGV+LYQF++VIF+I GG+QS+L+ LY SYE++PL++ +++ ++++ F FSLW+SFI 
Sbjct  121  SVTGVLLYQFVTVIFIISGGLQSVLNVLYNSYELFPLDSVLTIRWSVVKFAFSLWESFIS  180

Query  181  LMLSFSVPMIIGIFLCDMGFGFLNKTAPQLNVFTLSLPVKSLIAIFILLLVIHVFPDFIT  240
            LMLSFS+PM+IGIFLCDMGFGFLNKTAPQLNVFTLSLPVKS +++FILLLVIHVFP+FI 
Sbjct  181  LMLSFSIPMVIGIFLCDMGFGFLNKTAPQLNVFTLSLPVKSCVSVFILLLVIHVFPEFIN  240

Query  241  ANIHSDIIDRSLPSMINE  258
            A I++DI+   L  +++E
Sbjct  241  AGINADIFSSLLRDLLHE  258

6) ECs4581 in NC_002695


> JQ747540|41|G37|397782024|AFO66402.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|+|35975..36751|escT|SESS1635_03849|putative 
LEE-encoded type III secretion system factor
Length=258

 Score =  289 bits (1081),  Expect = 9e-80, Method: Compositional matrix adjust.
 Identities = 179/258 (70%), Positives = 231/258 (90%), Gaps = 0/258 (0%)

Query  1    MNEIMTVIVSSFYCILRPLGMFIILPIFSTGVLLSNFIRNSIMIAFTLPIIVENYTFSEK  60
            MN+I+  +VS F+CILRPLG FII+P+FS GVLL+NFIRNS++I ++LPI+++NY FSE+
Sbjct  1    MNDIINAMVSMFFCILRPLGAFIIFPLFSMGVLLTNFIRNSVIICLALPIFLQNYNFSER  60

Query  61   LPSGIFQLTGIALKEISIGFFIGLSFTILFWAIDAAGQIIDTLRGSTissifnpsisdss  120
            LP GI+ L+ IA+KEI IGFFIGLSFTI+FWAIDAAGQIIDTLRGSTISSIFNP+ISDSS
Sbjct  61   LPVGILSLANIAFKEIIIGFFIGLSFTIVFWAIDAAGQIIDTLRGSTISSIFNPAISDSS  120

Query  121  siTGVILYQFISVIFVIHGGIQSILDKLYLSYEILPLQADIAFNRALIDFLFSLWDSFIK  180
            S+TGV+LYQF++VIF+I GG+QS+L+ LY SYE++PL++ +++ ++++ F FSLW+SFI 
Sbjct  121  SVTGVLLYQFVTVIFIISGGLQSVLNVLYNSYELFPLDSVLTIRWSVVKFAFSLWESFIS  180

Query  181  LMLSFSVPMIIGIFLCDMGFGFLNKTAPQLNVFTLSLPVKSLIAIFILLLVIHVFPDFIT  240
            LMLSFS+PM+IGIFLCDMGFGFLNKTAPQLNVFTLSLPVKS +++FILLLVIHVFP+FI 
Sbjct  181  LMLSFSIPMVIGIFLCDMGFGFLNKTAPQLNVFTLSLPVKSCVSVFILLLVIHVFPEFIN  240

Query  241  ANIHSDIIDRSLPSMINE  258
            A I++DI+   L  +++E
Sbjct  241  AGINADIFSSLLRDLLHE  258

7) escT in NC_013008


> JQ747540|41|G37|397782024|AFO66402.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|+|35975..36751|escT|SESS1635_03849|putative 
LEE-encoded type III secretion system factor
Length=258

 Score =  289 bits (1081),  Expect = 9e-80, Method: Compositional matrix adjust.
 Identities = 179/258 (70%), Positives = 231/258 (90%), Gaps = 0/258 (0%)

Query  1    MNEIMTVIVSSFYCILRPLGMFIILPIFSTGVLLSNFIRNSIMIAFTLPIIVENYTFSEK  60
            MN+I+  +VS F+CILRPLG FII+P+FS GVLL+NFIRNS++I ++LPI+++NY FSE+
Sbjct  1    MNDIINAMVSMFFCILRPLGAFIIFPLFSMGVLLTNFIRNSVIICLALPIFLQNYNFSER  60

Query  61   LPSGIFQLTGIALKEISIGFFIGLSFTILFWAIDAAGQIIDTLRGSTissifnpsisdss  120
            LP GI+ L+ IA+KEI IGFFIGLSFTI+FWAIDAAGQIIDTLRGSTISSIFNP+ISDSS
Sbjct  61   LPVGILSLANIAFKEIIIGFFIGLSFTIVFWAIDAAGQIIDTLRGSTISSIFNPAISDSS  120

Query  121  siTGVILYQFISVIFVIHGGIQSILDKLYLSYEILPLQADIAFNRALIDFLFSLWDSFIK  180
            S+TGV+LYQF++VIF+I GG+QS+L+ LY SYE++PL++ +++ ++++ F FSLW+SFI 
Sbjct  121  SVTGVLLYQFVTVIFIISGGLQSVLNVLYNSYELFPLDSVLTIRWSVVKFAFSLWESFIS  180

Query  181  LMLSFSVPMIIGIFLCDMGFGFLNKTAPQLNVFTLSLPVKSLIAIFILLLVIHVFPDFIT  240
            LMLSFS+PM+IGIFLCDMGFGFLNKTAPQLNVFTLSLPVKS +++FILLLVIHVFP+FI 
Sbjct  181  LMLSFSIPMVIGIFLCDMGFGFLNKTAPQLNVFTLSLPVKSCVSVFILLLVIHVFPEFIN  240

Query  241  ANIHSDIIDRSLPSMINE  258
            A I++DI+   L  +++E
Sbjct  241  AGINADIFSSLLRDLLHE  258

8) escT in NC_013941


> JQ747540|41|G37|397782024|AFO66402.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|+|35975..36751|escT|SESS1635_03849|putative 
LEE-encoded type III secretion system factor
Length=258

 Score =  289 bits (1081),  Expect = 9e-80, Method: Compositional matrix adjust.
 Identities = 179/258 (70%), Positives = 231/258 (90%), Gaps = 0/258 (0%)

Query  1    MNEIMTVIVSSFYCILRPLGMFIILPIFSTGVLLSNFIRNSIMIAFTLPIIVENYTFSEK  60
            MN+I+  +VS F+CILRPLG FII+P+FS GVLL+NFIRNS++I ++LPI+++NY FSE+
Sbjct  1    MNDIINAMVSMFFCILRPLGAFIIFPLFSMGVLLTNFIRNSVIICLALPIFLQNYNFSER  60

Query  61   LPSGIFQLTGIALKEISIGFFIGLSFTILFWAIDAAGQIIDTLRGSTissifnpsisdss  120
            LP GI+ L+ IA+KEI IGFFIGLSFTI+FWAIDAAGQIIDTLRGSTISSIFNP+ISDSS
Sbjct  61   LPVGILSLANIAFKEIIIGFFIGLSFTIVFWAIDAAGQIIDTLRGSTISSIFNPAISDSS  120

Query  121  siTGVILYQFISVIFVIHGGIQSILDKLYLSYEILPLQADIAFNRALIDFLFSLWDSFIK  180
            S+TGV+LYQF++VIF+I GG+QS+L+ LY SYE++PL++ +++ ++++ F FSLW+SFI 
Sbjct  121  SVTGVLLYQFVTVIFIISGGLQSVLNVLYNSYELFPLDSVLTIRWSVVKFAFSLWESFIS  180

Query  181  LMLSFSVPMIIGIFLCDMGFGFLNKTAPQLNVFTLSLPVKSLIAIFILLLVIHVFPDFIT  240
            LMLSFS+PM+IGIFLCDMGFGFLNKTAPQLNVFTLSLPVKS +++FILLLVIHVFP+FI 
Sbjct  181  LMLSFSIPMVIGIFLCDMGFGFLNKTAPQLNVFTLSLPVKSCVSVFILLLVIHVFPEFIN  240

Query  241  ANIHSDIIDRSLPSMINE  258
            A I++DI+   L  +++E
Sbjct  241  AGINADIFSSLLRDLLHE  258

9) ECO55CA74_21280 in NC_017656


> JQ747540|41|G37|397782024|AFO66402.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|+|35975..36751|escT|SESS1635_03849|putative 
LEE-encoded type III secretion system factor
Length=258

 Score =  289 bits (1081),  Expect = 9e-80, Method: Compositional matrix adjust.
 Identities = 179/258 (70%), Positives = 231/258 (90%), Gaps = 0/258 (0%)

Query  1    MNEIMTVIVSSFYCILRPLGMFIILPIFSTGVLLSNFIRNSIMIAFTLPIIVENYTFSEK  60
            MN+I+  +VS F+CILRPLG FII+P+FS GVLL+NFIRNS++I ++LPI+++NY FSE+
Sbjct  1    MNDIINAMVSMFFCILRPLGAFIIFPLFSMGVLLTNFIRNSVIICLALPIFLQNYNFSER  60

Query  61   LPSGIFQLTGIALKEISIGFFIGLSFTILFWAIDAAGQIIDTLRGSTissifnpsisdss  120
            LP GI+ L+ IA+KEI IGFFIGLSFTI+FWAIDAAGQIIDTLRGSTISSIFNP+ISDSS
Sbjct  61   LPVGILSLANIAFKEIIIGFFIGLSFTIVFWAIDAAGQIIDTLRGSTISSIFNPAISDSS  120

Query  121  siTGVILYQFISVIFVIHGGIQSILDKLYLSYEILPLQADIAFNRALIDFLFSLWDSFIK  180
            S+TGV+LYQF++VIF+I GG+QS+L+ LY SYE++PL++ +++ ++++ F FSLW+SFI 
Sbjct  121  SVTGVLLYQFVTVIFIISGGLQSVLNVLYNSYELFPLDSVLTIRWSVVKFAFSLWESFIS  180

Query  181  LMLSFSVPMIIGIFLCDMGFGFLNKTAPQLNVFTLSLPVKSLIAIFILLLVIHVFPDFIT  240
            LMLSFS+PM+IGIFLCDMGFGFLNKTAPQLNVFTLSLPVKS +++FILLLVIHVFP+FI 
Sbjct  181  LMLSFSIPMVIGIFLCDMGFGFLNKTAPQLNVFTLSLPVKSCVSVFILLLVIHVFPEFIN  240

Query  241  ANIHSDIIDRSLPSMINE  258
            A I++DI+   L  +++E
Sbjct  241  AGINADIFSSLLRDLLHE  258

10) CDCO157_4316 in NC_017906


> JQ747540|41|G37|397782024|AFO66402.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|+|35975..36751|escT|SESS1635_03849|putative 
LEE-encoded type III secretion system factor
Length=258

 Score =  289 bits (1081),  Expect = 9e-80, Method: Compositional matrix adjust.
 Identities = 179/258 (70%), Positives = 231/258 (90%), Gaps = 0/258 (0%)

Query  1    MNEIMTVIVSSFYCILRPLGMFIILPIFSTGVLLSNFIRNSIMIAFTLPIIVENYTFSEK  60
            MN+I+  +VS F+CILRPLG FII+P+FS GVLL+NFIRNS++I ++LPI+++NY FSE+
Sbjct  1    MNDIINAMVSMFFCILRPLGAFIIFPLFSMGVLLTNFIRNSVIICLALPIFLQNYNFSER  60

Query  61   LPSGIFQLTGIALKEISIGFFIGLSFTILFWAIDAAGQIIDTLRGSTissifnpsisdss  120
            LP GI+ L+ IA+KEI IGFFIGLSFTI+FWAIDAAGQIIDTLRGSTISSIFNP+ISDSS
Sbjct  61   LPVGILSLANIAFKEIIIGFFIGLSFTIVFWAIDAAGQIIDTLRGSTISSIFNPAISDSS  120

Query  121  siTGVILYQFISVIFVIHGGIQSILDKLYLSYEILPLQADIAFNRALIDFLFSLWDSFIK  180
            S+TGV+LYQF++VIF+I GG+QS+L+ LY SYE++PL++ +++ ++++ F FSLW+SFI 
Sbjct  121  SVTGVLLYQFVTVIFIISGGLQSVLNVLYNSYELFPLDSVLTIRWSVVKFAFSLWESFIS  180

Query  181  LMLSFSVPMIIGIFLCDMGFGFLNKTAPQLNVFTLSLPVKSLIAIFILLLVIHVFPDFIT  240
            LMLSFS+PM+IGIFLCDMGFGFLNKTAPQLNVFTLSLPVKS +++FILLLVIHVFP+FI 
Sbjct  181  LMLSFSIPMVIGIFLCDMGFGFLNKTAPQLNVFTLSLPVKSCVSVFILLLVIHVFPEFIN  240

Query  241  ANIHSDIIDRSLPSMINE  258
            A I++DI+   L  +++E
Sbjct  241  AGINADIFSSLLRDLLHE  258

11) escT in NC_011601


> JQ747540|41|G37|397782024|AFO66402.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|+|35975..36751|escT|SESS1635_03849|putative 
LEE-encoded type III secretion system factor
Length=258

 Score =  288 bits (1077),  Expect = 2e-79, Method: Compositional matrix adjust.
 Identities = 178/258 (69%), Positives = 230/258 (90%), Gaps = 0/258 (0%)

Query  1    MNEIMTVIVSSFYCILRPLGMFIILPIFSTGVLLSNFIRNSIMIAFTLPIIVENYTFSEK  60
            MN+I+  +VS F+CILRPLG FII+P+FS GVLL+NFIRNS++I ++LPI+++NY FSE+
Sbjct  1    MNDIINAMVSMFFCILRPLGAFIIFPLFSMGVLLTNFIRNSVIICLALPIFLQNYNFSER  60

Query  61   LPSGIFQLTGIVLKEISIGFFIGLSFTILFWAIDAAGQIIDTLRGSTissifnpsisdss  120
            LP GI+ L+ I +KEI IGFFIGLSFTI+FWAIDAAGQIIDTLRGSTISSIFNP+ISDSS
Sbjct  61   LPVGILSLANIAFKEIIIGFFIGLSFTIVFWAIDAAGQIIDTLRGSTISSIFNPAISDSS  120

Query  121  siTGVILYQFISVIFVIHGGIQSILDKLYLSYEILPLQADIAFNRALIDFLFSLWDSFIK  180
            S+TGV+LYQF++VIF+I GG+QS+L+ LY SYE++PL++ +++ ++++ F FSLW+SFI 
Sbjct  121  SVTGVLLYQFVTVIFIISGGLQSVLNVLYNSYELFPLDSVLTIRWSVVKFAFSLWESFIS  180

Query  181  LMLSFSVPMIIGIFLCDMGFGFLNKTAPQLNVFTLSLPVKSLIAIFILLLVIHVFPDFIT  240
            LMLSFS+PM+IGIFLCDMGFGFLNKTAPQLNVFTLSLPVKS +++FILLLVIHVFP+FI 
Sbjct  181  LMLSFSIPMVIGIFLCDMGFGFLNKTAPQLNVFTLSLPVKSCVSVFILLLVIHVFPEFIN  240

Query  241  ANIHSDIIDRSLPSMINE  258
            A I++DI+   L  +++E
Sbjct  241  AGINADIFSSLLRDLLHE  258

12) escT in NC_013716


> JQ747540|41|G37|397782024|AFO66402.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|+|35975..36751|escT|SESS1635_03849|putative 
LEE-encoded type III secretion system factor
Length=258

 Score =  287 bits (1074),  Expect = 3e-79, Method: Compositional matrix adjust.
 Identities = 186/258 (73%), Positives = 228/258 (89%), Gaps = 0/258 (0%)

Query  1    MNEIMTVIVSSFFCILRPLGMFIILPIFSTGVLLSNFIRNSIMVAFTLPIIVENYKFSEG  60
            MN+I+  +VS FFCILRPLG FII+P+FS GVLL+NFIRNS+++ ++LPI+++NY+FSE 
Sbjct  1    MNDIINAMVSMFFCILRPLGAFIIFPLFSMGVLLTNFIRNSVIICLALPIFLQNYNFSER  60

Query  61   LPSGIFQLIAIVLKEISIGFFIGLSFTILFWAIDAAGQIIDTLRGSTissifnpsisdss  120
            LP GI+ L  I +KEI IGFFIGLSFTI+FWAIDAAGQIIDTLRGSTISSIFNP+ISDSS
Sbjct  61   LPVGILSLANIAFKEIIIGFFIGLSFTIVFWAIDAAGQIIDTLRGSTISSIFNPAISDSS  120

Query  121  siTGVILYQFVTVIFVIHGGIQSVLDKLYLSYEMLPLQSGITFNHTLVDFLFSLWDSFIK  180
            S+TGV+LYQFVTVIF+I GG+QSVL+ LY SYE++PL+S +T+  ++V F FSLW+SFI 
Sbjct  121  SVTGVLLYQFVTVIFIISGGLQSVLNVLYNSYELFPLDSVLTIRWSVVKFAFSLWESFIS  180

Query  181  LMLSFSVPMVIGIFLCDMGFGFLNKTAPQLNVFTLSLPVKSLIAVFILLLVIHIFPEFIT  240
            LMLSFS+PMVIGIFLCDMGFGFLNKTAPQLNVFTLSLPVKS ++VFILLLVIH+FPEFI 
Sbjct  181  LMLSFSIPMVIGIFLCDMGFGFLNKTAPQLNVFTLSLPVKSCVSVFILLLVIHVFPEFIN  240

Query  241  ANIHSDIIDRTLPSMINE  258
            A I++DI+   L  +++E
Sbjct  241  AGINADIFSSLLRDLLHE  258

13) SBOV14171 in NC_022241


> JQ747540|41|G37|397782024|AFO66402.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|+|35975..36751|escT|SESS1635_03849|putative 
LEE-encoded type III secretion system factor
Length=258

 Score =  105 bits (381),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 73/182 (41%), Positives = 131/182 (72%), Gaps = 1/182 (0%)

Query  39   LRNGVLMSLTFPILPIIYQQKIMMHIGKDYSWLGLVTGEVIIGFLIGFCAAVPFWAVDMA  98
            +RN+V++ L++PI+   Y+    + +G   S   +   E+IIGF+IG+  ++ FWA+D A
Sbjct  38   IRNSVIICLALPIFLQNYNFSERLPVGI-LSLANIAFKEIIIGFFIGLSFTIVFWAIDAA  96

Query  99   GFLLDTLRGATMGTIFNSTIEAETSLFGLLFSQFLCVIFFISGGMEFILNILYESYQYLP  158
            G ++DTLRG+T+++IFN++I   +S+ G+L+ QF+ VIF+ISGG++ +LN+LY+SY+ +P
Sbjct  97   GQIIDTLRGSTISSIFNPAISDSSSVTGVLLYQFVTVIFIISGGLQSVLNVLYNSYELFP  156

Query  159  PGRTLLFDRQFLKYIQAEWRTLYQLCISFSLPAIICMVLADLALGLLNRSAQQLNVFFFS  218
             +  L + +  +K+  + W ++  L +SFS+P +I + L D+++G+LN++A QLNVF +S
Sbjct  157  LDSVLTIRWSVVKFAFSLWESFISLMLSFSIPMVIGIFLCDMGFGFLNKTAPQLNVFTLS  216

Query  219  MP  220
            +P
Sbjct  217  LP  218

14) epaR in NC_011080


> JQ747540|41|G37|397782024|AFO66402.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|+|35975..36751|escT|SESS1635_03849|putative 
LEE-encoded type III secretion system factor
Length=258

 Score =  105 bits (381),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 73/182 (41%), Positives = 131/182 (72%), Gaps = 1/182 (0%)

Query  39   LRNGVLMSLTFPILPIIYQQKIMMHIGKDYSWLGLVTGEVIIGFLIGFCAAVPFWAVDMA  98
            +RN+V++ L++PI+   Y+    + +G   S   +   E+IIGF+IG+  ++ FWA+D A
Sbjct  38   IRNSVIICLALPIFLQNYNFSERLPVGI-LSLANIAFKEIIIGFFIGLSFTIVFWAIDAA  96

Query  99   GFLLDTLRGATMGTIFNSTIEAETSLFGLLFSQFLCVIFFISGGMEFILNILYESYQYLP  158
            G ++DTLRG+T+++IFN++I   +S+ G+L+ QF+ VIF+ISGG++ +LN+LY+SY+ +P
Sbjct  97   GQIIDTLRGSTISSIFNPAISDSSSVTGVLLYQFVTVIFIISGGLQSVLNVLYNSYELFP  156

Query  159  PGRTLLFDRQFLKYIQAEWRTLYQLCISFSLPAIICMVLADLALGLLNRSAQQLNVFFFS  218
             +  L + +  +K+  + W ++  L +SFS+P +I + L D+++G+LN++A QLNVF +S
Sbjct  157  LDSVLTIRWSVVKFAFSLWESFISLMLSFSIPMVIGIFLCDMGFGFLNKTAPQLNVFTLS  216

Query  219  MP  220
            +P
Sbjct  217  LP  218

15) ssaT in NC_022221


> JQ747540|41|G37|397782024|AFO66402.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|+|35975..36751|escT|SESS1635_03849|putative 
LEE-encoded type III secretion system factor
Length=258

 Score =  104 bits (376),  Expect = 5e-24, Method: Compositional matrix adjust.
 Identities = 73/182 (41%), Positives = 129/182 (71%), Gaps = 1/182 (0%)

Query  39   LRNGVLMSLTFPILPIIYQQKIMMHIGKDYSWLGLVTGEVIIGFLIGFCAAVPFWAVDMA  98
            +RN+V++ L++PI+   Y+    + +G   S   +   E+IIGF+IG+  ++ FWA+D A
Sbjct  38   IRNSVIICLALPIFLQNYNFSERLPVGI-LSLANIAFKEIIIGFFIGLSFTIVFWAIDAA  96

Query  99   GFLLDTLRGATMGTIFNSTIEAETSLFGLLFSQFLCVIFFISGGMEFILNILYESYQYLP  158
            G ++DTLRG+T+++IFN++I   +S+ G+L+ QF+ VIF+ISGG++ +LN+LY+SY+ +P
Sbjct  97   GQIIDTLRGSTISSIFNPAISDSSSVTGVLLYQFVTVIFIISGGLQSVLNVLYNSYELFP  156

Query  159  PGRTLLFDQQFLKYIQAEWRTLYQLCIRFSLPAIICMVLADLALGLLNRSAQQLNVFFLS  218
             +  L +    +K+  + W ++  L + FS+P +I + L D+++G+LN++A QLNVF LS
Sbjct  157  LDSVLTIRWSVVKFAFSLWESFISLMLSFSIPMVIGIFLCDMGFGFLNKTAPQLNVFTLS  216

Query  219  MP  220
            +P
Sbjct  217  LP  218

16) I137_05710 in NC_021984


> JQ747540|41|G37|397782024|AFO66402.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|+|35975..36751|escT|SESS1635_03849|putative 
LEE-encoded type III secretion system factor
Length=258

 Score =  104 bits (376),  Expect = 5e-24, Method: Compositional matrix adjust.
 Identities = 73/182 (41%), Positives = 129/182 (71%), Gaps = 1/182 (0%)

Query  39   LRNGVLMSLTFPILPIIYQQKIMMHIGKDYSWLGLVTGEVIIGFLIGFCAAVPFWAVDMA  98
            +RN+V++ L++PI+   Y+    + +G   S   +   E+IIGF+IG+  ++ FWA+D A
Sbjct  38   IRNSVIICLALPIFLQNYNFSERLPVGI-LSLANIAFKEIIIGFFIGLSFTIVFWAIDAA  96

Query  99   GFLLDTLRGATMGTIFNSTIEAETSLFGLLFSQFLCVIFFISGGMEFILNILYESYQYLP  158
            G ++DTLRG+T+++IFN++I   +S+ G+L+ QF+ VIF+ISGG++ +LN+LY+SY+ +P
Sbjct  97   GQIIDTLRGSTISSIFNPAISDSSSVTGVLLYQFVTVIFIISGGLQSVLNVLYNSYELFP  156

Query  159  PGRTLLFDQQFLKYIQAEWRTLYQLCIRFSLPAIICMVLADLALGLLNRSAQQLNVFFLS  218
             +  L +    +K+  + W ++  L + FS+P +I + L D+++G+LN++A QLNVF LS
Sbjct  157  LDSVLTIRWSVVKFAFSLWESFISLMLSFSIPMVIGIFLCDMGFGFLNKTAPQLNVFTLS  216

Query  219  MP  220
            +P
Sbjct  217  LP  218

17) ssaT in NC_011294


> JQ747540|41|G37|397782024|AFO66402.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|+|35975..36751|escT|SESS1635_03849|putative 
LEE-encoded type III secretion system factor
Length=258

 Score =  103 bits (372),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 73/182 (41%), Positives = 130/182 (72%), Gaps = 1/182 (0%)

Query  39   LRNGVLMSLTFPILPIIYQQKIMMHIGKDYSWLGLVTGEVIIGFLIGFCAAVPFWAVDMA  98
            +RN+V++ L++PI+   Y+    + +G   S   +   E+IIGF+IG+  ++ FWA+D A
Sbjct  38   IRNSVIICLALPIFLQNYNFSERLPVGI-LSLANIAFKEIIIGFFIGLSFTIVFWAIDAA  96

Query  99   GFLLDTLRGATMGTIFNSTIEAETSLFGLLFSQFLCVIFFISGGMEFILNILYESYQYLP  158
            G ++DTLRG+T+++IFN++I   +S+ G+L+ QF+ VIF+ISGG++ +LN+LY+SY+ +P
Sbjct  97   GQIIDTLRGSTISSIFNPAISDSSSVTGVLLYQFVTVIFIISGGLQSVLNVLYNSYELFP  156

Query  159  PGRTLLFDQQFLKYIQAEWRTLYQLCISFSLPAIICMVLADLALGLLNRSAQQLNVFFFS  218
             +  L +    +K+  + W ++  L +SFS+P +I + L D+++G+LN++A QLNVF +S
Sbjct  157  LDSVLTIRWSVVKFAFSLWESFISLMLSFSIPMVIGIFLCDMGFGFLNKTAPQLNVFTLS  216

Query  219  MP  220
            +P
Sbjct  217  LP  218

18) SEEH1578_16340 in NC_021810


> JQ747540|41|G37|397782024|AFO66402.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|+|35975..36751|escT|SESS1635_03849|putative 
LEE-encoded type III secretion system factor
Length=258

 Score =  103 bits (372),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 73/182 (41%), Positives = 130/182 (72%), Gaps = 1/182 (0%)

Query  39   LRNGVLMSLTFPILPIIYQQKIMMHIGKDYSWLGLVTGEVIIGFLIGFCAAVPFWAVDMA  98
            +RN+V++ L++PI+   Y+    + +G   S   +   E+IIGF+IG+  ++ FWA+D A
Sbjct  38   IRNSVIICLALPIFLQNYNFSERLPVGI-LSLANIAFKEIIIGFFIGLSFTIVFWAIDAA  96

Query  99   GFLLDTLRGATMGTIFNSTIEAETSLFGLLFSQFLCVIFFISGGMEFILNILYESYQYLP  158
            G ++DTLRG+T+++IFN++I   +S+ G+L+ QF+ VIF+ISGG++ +LN+LY+SY+ +P
Sbjct  97   GQIIDTLRGSTISSIFNPAISDSSSVTGVLLYQFVTVIFIISGGLQSVLNVLYNSYELFP  156

Query  159  PGRTLLFDQQFLKYIQAEWRTLYQLCISFSLPAIICMVLADLALGLLNRSAQQLNVFFFS  218
             +  L +    +K+  + W ++  L +SFS+P +I + L D+++G+LN++A QLNVF +S
Sbjct  157  LDSVLTIRWSVVKFAFSLWESFISLMLSFSIPMVIGIFLCDMGFGFLNKTAPQLNVFTLS  216

Query  219  MP  220
            +P
Sbjct  217  LP  218

19) CFSAN002069_01895 in NC_021812


> JQ747540|41|G37|397782024|AFO66402.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|+|35975..36751|escT|SESS1635_03849|putative 
LEE-encoded type III secretion system factor
Length=258

 Score =  103 bits (372),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 73/182 (41%), Positives = 130/182 (72%), Gaps = 1/182 (0%)

Query  39   LRNGVLMSLTFPILPIIYQQKIMMHIGKDYSWLGLVTGEVIIGFLIGFCAAVPFWAVDMA  98
            +RN+V++ L++PI+   Y+    + +G   S   +   E+IIGF+IG+  ++ FWA+D A
Sbjct  38   IRNSVIICLALPIFLQNYNFSERLPVGI-LSLANIAFKEIIIGFFIGLSFTIVFWAIDAA  96

Query  99   GFLLDTLRGATMGTIFNSTIEAETSLFGLLFSQFLCVIFFISGGMEFILNILYESYQYLP  158
            G ++DTLRG+T+++IFN++I   +S+ G+L+ QF+ VIF+ISGG++ +LN+LY+SY+ +P
Sbjct  97   GQIIDTLRGSTISSIFNPAISDSSSVTGVLLYQFVTVIFIISGGLQSVLNVLYNSYELFP  156

Query  159  PGRTLLFDQQFLKYIQAEWRTLYQLCISFSLPAIICMVLADLALGLLNRSAQQLNVFFFS  218
             +  L +    +K+  + W ++  L +SFS+P +I + L D+++G+LN++A QLNVF +S
Sbjct  157  LDSVLTIRWSVVKFAFSLWESFISLMLSFSIPMVIGIFLCDMGFGFLNKTAPQLNVFTLS  216

Query  219  MP  220
            +P
Sbjct  217  LP  218

20) epaR in NC_011083


> JQ747540|41|G37|397782024|AFO66402.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|+|35975..36751|escT|SESS1635_03849|putative 
LEE-encoded type III secretion system factor
Length=258

 Score =  103 bits (372),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 73/182 (41%), Positives = 130/182 (72%), Gaps = 1/182 (0%)

Query  39   LRNGVLMSLTFPILPIIYQQKIMMHIGKDYSWLGLVTGEVIIGFLIGFCAAVPFWAVDMA  98
            +RN+V++ L++PI+   Y+    + +G   S   +   E+IIGF+IG+  ++ FWA+D A
Sbjct  38   IRNSVIICLALPIFLQNYNFSERLPVGI-LSLANIAFKEIIIGFFIGLSFTIVFWAIDAA  96

Query  99   GFLLDTLRGATMGTIFNSTIEAETSLFGLLFSQFLCVIFFISGGMEFILNILYESYQYLP  158
            G ++DTLRG+T+++IFN++I   +S+ G+L+ QF+ VIF+ISGG++ +LN+LY+SY+ +P
Sbjct  97   GQIIDTLRGSTISSIFNPAISDSSSVTGVLLYQFVTVIFIISGGLQSVLNVLYNSYELFP  156

Query  159  PGRTLLFDQQFLKYIQAEWRTLYQLCISFSLPAIICMVLADLALGLLNRSAQQLNVFFFS  218
             +  L +    +K+  + W ++  L +SFS+P +I + L D+++G+LN++A QLNVF +S
Sbjct  157  LDSVLTIRWSVVKFAFSLWESFISLMLSFSIPMVIGIFLCDMGFGFLNKTAPQLNVFTLS  216

Query  219  MP  220
            +P
Sbjct  217  LP  218

21) ssaT in NC_016831


> JQ747540|41|G37|397782024|AFO66402.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|+|35975..36751|escT|SESS1635_03849|putative 
LEE-encoded type III secretion system factor
Length=258

 Score =  103 bits (375),  Expect = 6e-24, Method: Compositional matrix adjust.
 Identities = 73/182 (41%), Positives = 129/182 (71%), Gaps = 1/182 (0%)

Query  39   LRNGVLMSLTFPILPIIYQQKIMMHIGKDYSWLGLVTGEVIIGFLIGFCAAVPFWAVDMA  98
            +RN+V++ L++PI+   Y+    + +G   S   +   E+IIGF+IG+  ++ FWA+D A
Sbjct  38   IRNSVIICLALPIFLQNYNFSERLPVGI-LSLANIAFKEIIIGFFIGLSFTIVFWAIDAA  96

Query  99   GFLLDTLRGATMGTIFNSTIEAETSLFGLLFSQFLCVIFFISGGMEFILNILYESYQYLP  158
            G ++DTLRG+T+++IFN++I   +S+ G+L+ QF+ VIF+ISGG++ +LN+LY+SY+ +P
Sbjct  97   GQIIDTLRGSTISSIFNPAISDSSSVTGVLLYQFVTVIFIISGGLQSVLNVLYNSYELFP  156

Query  159  PGRTLLFDQQFLKYIQAEWRTLYQLCIRFSLPAIICMVLADLALGLLNRSAQQLNVFFLS  218
             +  L +    +K+  + W ++  L + FS+P +I + L D+++G+LN++A QLNVF LS
Sbjct  157  LDSVLTIRWSVVKFAFSLWESFISLMLSFSIPMVIGIFLCDMGFGFLNKTAPQLNVFTLS  216

Query  219  MP  220
            +P
Sbjct  217  LP  218