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Homologs of unnamed gene of AF022236

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) E2348C_3931
( YP_002331393.1 )

component of T3SS

NC_011601
(Escherichia coli E2348/69)

6e-38

100

2) G2583_4406
( YP_003501857.1 )

hypothetical protein

NC_013941
(Escherichia coli CB9615)

6e-36

3) Z5102
( NP_290251.1 )

hypothetical protein

NC_002655
(Escherichia coli EDL933)

6e-36

4) ECO55CA74_21145
( YP_006161334.1 )

hypothetical protein

NC_017656
(Escherichia coli RM12579)

6e-36

5) ECs4551
( NP_312578.1 )

hypothetical protein

NC_002695
(Escherichia coli Sakai)

6e-36

6) orf29
( YP_003080463.1 )

LEE-encoded type III secretion system factor

NC_013008
(Escherichia coli TW14359)

6e-36

7) CDCO157_4285
( YP_006315151.1 )

hypothetical protein

NC_017906
(Escherichia coli Xuzhou21)

6e-36

8) ECO111_3735
( YP_003236071.1 )

T3SS component

NC_013364
(Escherichia coli 11128)

6e-36

9) ECO26_5288
( YP_003232170.1 )

T3SS component

NC_013361
(Escherichia coli 11368)

4e-29

10) ECO103_3601
( YP_003223458.1 )

T3SS component

NC_013353
(Escherichia coli 12009)

4e-29

11) ROD_29711
( YP_003366485.1 )

T3SS component

NC_013716
(Citrobacter rodentium ICC168)

3e-27

12) SVI_2243
( YP_003556992.1 )

hypothetical protein

NC_014012
(Shewanella violacea DSS12)

0.001

• Sequence Alignments

1) E2348C_3931 in NC_011601


> AF022236|41|G40|2865307|AAC38399.1|Escherichia_coli_E2348/69|+|33758..34036|-|-|Orf29
Length=92

 Score =  150 bits (551),  Expect = 6e-38, Method: Compositional matrix adjust.
 Identities = 92/92 (100%), Positives = 92/92 (100%), Gaps = 0/92 (0%)

Query  1   MVNDISANKILVWAAVAAANHKLPKYAEAILNVFPQIIPDKKDIAHLEFIILFGLNRKND  60
           MVNDISANKILVWAAVAAANHKLPKYAEAILNVFPQIIPDKKDIAHLEFIILFGLNRKND
Sbjct  1   MVNDISANKILVWAAVAAANHKLPKYAEAILNVFPQIIPDKKDIAHLEFIILFGLNRKND  60

Query  61  AIKALEGCMDDESSQLLYSLFHENVSGWVRGF  92
           AIKALEGCMDDESSQLLYSLFHENVSGWVRGF
Sbjct  61  AIKALEGCMDDESSQLLYSLFHENVSGWVRGF  92

2) Z5102 in NC_002655


> AF022236|41|G40|2865307|AAC38399.1|Escherichia_coli_E2348/69|+|33758..34036|-|-|Orf29
Length=92

 Score =  143 bits (526),  Expect = 6e-36, Method: Compositional matrix adjust.
 Identities = 87/92 (95%), Positives = 90/92 (98%), Gaps = 0/92 (0%)

Query  1   MVNDISANKILVWAAVAAANHKLPKYAEAILNVFPQIIPDKKDIAHLEFIILFGLNRKND  60
           MVNDISANKILVWAAVAAANHKLPKYAEAILNVFPQIIPDKKDIAHLEFIILFGLNRKND
Sbjct  1   MVNDISANKILVWAAVAAANHKLPKYAEAILNVFPQIIPDKKDIAHLEFIILFGLNRKND  60

Query  61  AVKALEDCMDDETSQLLYSLVHENGSGWVRGF  92
           A+KALE+CMDDE+SQLLYSL HEN SGWVRGF
Sbjct  61  AIKALEGCMDDESSQLLYSLFHENVSGWVRGF  92

3) ECs4551 in NC_002695


> AF022236|41|G40|2865307|AAC38399.1|Escherichia_coli_E2348/69|+|33758..34036|-|-|Orf29
Length=92

 Score =  143 bits (526),  Expect = 6e-36, Method: Compositional matrix adjust.
 Identities = 87/92 (95%), Positives = 90/92 (98%), Gaps = 0/92 (0%)

Query  1   MVNDISANKILVWAAVAAANHKLPKYAEAILNVFPQIIPDKKDIAHLEFIILFGLNRKND  60
           MVNDISANKILVWAAVAAANHKLPKYAEAILNVFPQIIPDKKDIAHLEFIILFGLNRKND
Sbjct  1   MVNDISANKILVWAAVAAANHKLPKYAEAILNVFPQIIPDKKDIAHLEFIILFGLNRKND  60

Query  61  AVKALEDCMDDETSQLLYSLVHENGSGWVRGF  92
           A+KALE+CMDDE+SQLLYSL HEN SGWVRGF
Sbjct  61  AIKALEGCMDDESSQLLYSLFHENVSGWVRGF  92

4) orf29 in NC_013008


> AF022236|41|G40|2865307|AAC38399.1|Escherichia_coli_E2348/69|+|33758..34036|-|-|Orf29
Length=92

 Score =  143 bits (526),  Expect = 6e-36, Method: Compositional matrix adjust.
 Identities = 87/92 (95%), Positives = 90/92 (98%), Gaps = 0/92 (0%)

Query  1   MVNDISANKILVWAAVAAANHKLPKYAEAILNVFPQIIPDKKDIAHLEFIILFGLNRKND  60
           MVNDISANKILVWAAVAAANHKLPKYAEAILNVFPQIIPDKKDIAHLEFIILFGLNRKND
Sbjct  1   MVNDISANKILVWAAVAAANHKLPKYAEAILNVFPQIIPDKKDIAHLEFIILFGLNRKND  60

Query  61  AVKALEDCMDDETSQLLYSLVHENGSGWVRGF  92
           A+KALE+CMDDE+SQLLYSL HEN SGWVRGF
Sbjct  61  AIKALEGCMDDESSQLLYSLFHENVSGWVRGF  92

5) G2583_4406 in NC_013941


> AF022236|41|G40|2865307|AAC38399.1|Escherichia_coli_E2348/69|+|33758..34036|-|-|Orf29
Length=92

 Score =  143 bits (526),  Expect = 6e-36, Method: Compositional matrix adjust.
 Identities = 87/92 (95%), Positives = 90/92 (98%), Gaps = 0/92 (0%)

Query  1   MVNDISANKILVWAAVAAANHKLPKYAEAILNVFPQIIPDKKDIAHLEFIILFGLNRKND  60
           MVNDISANKILVWAAVAAANHKLPKYAEAILNVFPQIIPDKKDIAHLEFIILFGLNRKND
Sbjct  1   MVNDISANKILVWAAVAAANHKLPKYAEAILNVFPQIIPDKKDIAHLEFIILFGLNRKND  60

Query  61  AVKALEDCMDDETSQLLYSLVHENGSGWVRGF  92
           A+KALE+CMDDE+SQLLYSL HEN SGWVRGF
Sbjct  61  AIKALEGCMDDESSQLLYSLFHENVSGWVRGF  92

6) ECO55CA74_21145 in NC_017656


> AF022236|41|G40|2865307|AAC38399.1|Escherichia_coli_E2348/69|+|33758..34036|-|-|Orf29
Length=92

 Score =  143 bits (526),  Expect = 6e-36, Method: Compositional matrix adjust.
 Identities = 87/92 (95%), Positives = 90/92 (98%), Gaps = 0/92 (0%)

Query  1   MVNDISANKILVWAAVAAANHKLPKYAEAILNVFPQIIPDKKDIAHLEFIILFGLNRKND  60
           MVNDISANKILVWAAVAAANHKLPKYAEAILNVFPQIIPDKKDIAHLEFIILFGLNRKND
Sbjct  1   MVNDISANKILVWAAVAAANHKLPKYAEAILNVFPQIIPDKKDIAHLEFIILFGLNRKND  60

Query  61  AVKALEDCMDDETSQLLYSLVHENGSGWVRGF  92
           A+KALE+CMDDE+SQLLYSL HEN SGWVRGF
Sbjct  61  AIKALEGCMDDESSQLLYSLFHENVSGWVRGF  92

7) CDCO157_4285 in NC_017906


> AF022236|41|G40|2865307|AAC38399.1|Escherichia_coli_E2348/69|+|33758..34036|-|-|Orf29
Length=92

 Score =  143 bits (526),  Expect = 6e-36, Method: Compositional matrix adjust.
 Identities = 87/92 (95%), Positives = 90/92 (98%), Gaps = 0/92 (0%)

Query  1   MVNDISANKILVWAAVAAANHKLPKYAEAILNVFPQIIPDKKDIAHLEFIILFGLNRKND  60
           MVNDISANKILVWAAVAAANHKLPKYAEAILNVFPQIIPDKKDIAHLEFIILFGLNRKND
Sbjct  1   MVNDISANKILVWAAVAAANHKLPKYAEAILNVFPQIIPDKKDIAHLEFIILFGLNRKND  60

Query  61  AVKALEDCMDDETSQLLYSLVHENGSGWVRGF  92
           A+KALE+CMDDE+SQLLYSL HEN SGWVRGF
Sbjct  61  AIKALEGCMDDESSQLLYSLFHENVSGWVRGF  92

8) ECO111_3735 in NC_013364


> AF022236|41|G40|2865307|AAC38399.1|Escherichia_coli_E2348/69|+|33758..34036|-|-|Orf29
Length=92

 Score =  143 bits (525),  Expect = 6e-36, Method: Compositional matrix adjust.
 Identities = 86/92 (94%), Positives = 89/92 (97%), Gaps = 0/92 (0%)

Query  1   MVNDVSANKILVWAAVAAANHKLPKYAEAILNVFPQIIPDKKDIAHLEFIILFGLNRKND  60
           MVND+SANKILVWAAVAAANHKLPKYAEAILNVFPQIIPDKKDIAHLEFIILFGLNRKND
Sbjct  1   MVNDISANKILVWAAVAAANHKLPKYAEAILNVFPQIIPDKKDIAHLEFIILFGLNRKND  60

Query  61  AVKALENCMDDETSQLLYSLVHENGSGWVRGF  92
           A+KALE CMDDE+SQLLYSL HEN SGWVRGF
Sbjct  61  AIKALEGCMDDESSQLLYSLFHENVSGWVRGF  92

9) ECO103_3601 in NC_013353


> AF022236|41|G40|2865307|AAC38399.1|Escherichia_coli_E2348/69|+|33758..34036|-|-|Orf29
Length=92

 Score =  120 bits (440),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 76/92 (83%), Positives = 84/92 (92%), Gaps = 0/92 (0%)

Query  1   MVNDVSANKILVWAAVAAANHKLPKYAESILNVLPQIIPDKKDIAHLEFIILYGLNRKND  60
           MVND+SANKILVWAAVAAANHKLPKYAE+ILNV+PQIIPDKKDIAHLEFIIL+GLNRKND
Sbjct  1   MVNDISANKILVWAAVAAANHKLPKYAEAILNVFPQIIPDKKDIAHLEFIILFGLNRKND  60

Query  61  AVKALEDFMDDETSQLLCSLVHENNRSWTLMF  92
           A+KALE+ MDDE+SQLL SL HEN  +W   F
Sbjct  61  AIKALEGCMDDESSQLLYSLFHENVSGWVRGF  92

10) ECO26_5288 in NC_013361


> AF022236|41|G40|2865307|AAC38399.1|Escherichia_coli_E2348/69|+|33758..34036|-|-|Orf29
Length=92

 Score =  120 bits (440),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 76/92 (83%), Positives = 84/92 (92%), Gaps = 0/92 (0%)

Query  1   MVNDVSANKILVWAAVAAANHKLPKYAESILNVLPQIIPDKKDIAHLEFIILYGLNRKND  60
           MVND+SANKILVWAAVAAANHKLPKYAE+ILNV+PQIIPDKKDIAHLEFIIL+GLNRKND
Sbjct  1   MVNDISANKILVWAAVAAANHKLPKYAEAILNVFPQIIPDKKDIAHLEFIILFGLNRKND  60

Query  61  AVKALEDFMDDETSQLLCSLVHENNRSWTLMF  92
           A+KALE+ MDDE+SQLL SL HEN  +W   F
Sbjct  61  AIKALEGCMDDESSQLLYSLFHENVSGWVRGF  92

11) ROD_29711 in NC_013716


> AF022236|41|G40|2865307|AAC38399.1|Escherichia_coli_E2348/69|+|33758..34036|-|-|Orf29
Length=92

 Score =  114 bits (416),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 68/80 (85%), Positives = 78/80 (98%), Gaps = 0/80 (0%)

Query  1   MGNDISANKIMVWAAVAAANHKLPKYAESILNVLPQILSDKKDIAHLEFIILYGLNKKND  60
           M NDISANKI+VWAAVAAANHKLPKYAE+ILNV+PQI++DKKDIAHLEFIIL+GLN+KND
Sbjct  1   MVNDISANKILVWAAVAAANHKLPKYAEAILNVFPQIIPDKKDIAHLEFIILFGLNRKND  60

Query  61  AVKALEGYMDDQTSQLLYSL  80
           A+KALEG MDD++SQLLYSL
Sbjct  61  AIKALEGCMDDESSQLLYSL  80

12) SVI_2243 in NC_014012


> AF022236|41|G40|2865307|AAC38399.1|Escherichia_coli_E2348/69|+|33758..34036|-|-|Orf29
Length=92

 Score = 36.1 bits (117),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 31/76 (41%), Positives = 44/76 (58%), Gaps = 1/76 (1%)

Query  4   SDKQLLVEIAIAASNHGLYKQAYALLTIFPQLIEDEEDRRICTSLIYFGLNEPAKALREL  63
           S +++LV  A+AA+NH L K A A+L +FPQ+I D  D      +I FGLN    A++ L
Sbjct  6   SANKILVWAAVAAANHKLPKYAEAILNVFPQIIPDKKDIAHLEFIILFGLNRKNDAIKAL  65

Query  64  SLCYSDMAQGLRF-LF  78
             C  D +  L + LF
Sbjct  66  EGCMDDESSQLLYSLF  81