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PAthogenisity Island DataBase (PAI DB)

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Homologs of tnp gene of U10927

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SAMSHR1132_19860
( YP_005326484.1 )

transposase (pseudogene)

NC_016941
(Staphylococcus aureus MSHR1132)

9e-75

2) C248_2181
( YP_006710878.1 )

transposase

NC_018608
(Staphylococcus aureus 08BA02176)

3e-71

3) ST398NM01_2207
( YP_006196241.1 )

transposase

NC_017673
(Staphylococcus aureus 71193)

3e-71

4) SAPIG2207
( YP_005734965.1 )

transposase

NC_017333
(Staphylococcus aureus ST398)

3e-71

5) tnp
( YP_254385.1 )

transposase for ISSha1

NC_007168
(Staphylococcus haemolyticus JCSC1435)

8e-42

6) tnp
( YP_254362.1 )

transposase for ISSha1

NC_007168
(Staphylococcus haemolyticus JCSC1435)

5e-41

7) tnp
( YP_254536.1 )

transposase for ISSha1

NC_007168
(Staphylococcus haemolyticus JCSC1435)

2e-40

• Sequence Alignments

1) SAMSHR1132_19860 in NC_016941


> U10927|40|G40|16579858|AAL26673.1|Staphylococcus_aureus_M|-|31018..31542|tnp|-|transposase
Length=174

 Score =  272 bits (1017),  Expect = 9e-75, Method: Compositional matrix adjust.
 Identities = 163/174 (94%), Positives = 170/174 (98%), Gaps = 0/174 (0%)

Query  41   MNELRTTNQPLYNKFKRYAKLLLKPGEDLEAFEYRNVALFKEWKTQKGIVKYLLDQDDSL  100
            MNELRTTNQPLYNKFKRYAKLLLKP EDLEAFEYR+VALFKEWKTQKGIVKY+LDQDDSL
Sbjct  1    MNELRTTNQPLYNKFKRYAKLLLKPEEDLEAFEYRKVALFKEWKTQKGIVKYILDQDDSL  60

Query  101  NESYKYINQLRFKLKHNDYEGFIHELKHTPLSQAHSVVQRAIKTLNKHAYFIKNTFGYYN  160
            N++Y+YINQLRFKLKHNDYEGFIHELKH PLSQAHS VQRAIKTLNKHAYFIKNTF+YYN
Sbjct  61   NDAYQYINQLRFKLKHNDYEGFIHELKHMPLSQAHSFVQRAIKTLNKHAYFIKNTFDYYN  120

Query  161  LSNGPLEGINNKIKLIKRTPFGYGSYNHLRNRILLCSKLYAPKSKKEVKQCLVA  214
            LSNGPLEGINNKIKLIKR +FGYGSYNHLRNRILLCSKLYAPKSKKEVKQCLVA
Sbjct  121  LSNGPLEGINNKIKLIKRISFGYGSYNHLRNRILLCSKLYAPKSKKEVKQCLVA  174

2) C248_2181 in NC_018608


> U10927|40|G40|16579858|AAL26673.1|Staphylococcus_aureus_M|-|31018..31542|tnp|-|transposase
Length=174

 Score =  260 bits (973),  Expect = 3e-71, Method: Compositional matrix adjust.
 Identities = 156/171 (92%), Positives = 163/171 (96%), Gaps = 0/171 (0%)

Query  41   MNELRTTNQPLYNKFKRYAKLLLKPGEDLGAFEYRKVALFKEWKTQKGIVKYLLDQDDSL  100
            MNELRTTNQPLYNKFKRYAKLLLKP EDL AFEYRKVALFKEWKTQKGIVKY+LDQDDSL
Sbjct  1    MNELRTTNQPLYNKFKRYAKLLLKPEEDLEAFEYRKVALFKEWKTQKGIVKYILDQDDSL  60

Query  101  NDAYQYINQLRFKLKHNDYEGFIHELKHMPLSQTHLVVQRAIKTLNKHAYFIKNTFDYYN  160
            NDAYQYINQLRFKLKHNDYEGFIHELKHMPLSQ+H  VQRAIKTLNKHAYFIKNTFDYYN
Sbjct  61   NDAYQYINQLRFKLKHNDYEGFIHELKHMPLSQAHSFVQRAIKTLNKHAYFIKNTFDYYN  120

Query  161  LSNGPLEGINNKIKLIKRTSFSYGNYNHLRNRILLCSKLYAPKSKRKLSNV  211
            LSNGPLEGINNKIKLIKR SF+YG+YNHLRNRILLCSKLYAPKSK+ + + 
Sbjct  121  LSNGPLEGINNKIKLIKRISFGYGSYNHLRNRILLCSKLYAPKSKKEVKQC  171

3) ST398NM01_2207 in NC_017673


> U10927|40|G40|16579858|AAL26673.1|Staphylococcus_aureus_M|-|31018..31542|tnp|-|transposase
Length=174

 Score =  260 bits (973),  Expect = 3e-71, Method: Compositional matrix adjust.
 Identities = 156/171 (92%), Positives = 163/171 (96%), Gaps = 0/171 (0%)

Query  41   MNELRTTNQPLYNKFKRYAKLLLKPGEDLGAFEYRKVALFKEWKTQKGIVKYLLDQDDSL  100
            MNELRTTNQPLYNKFKRYAKLLLKP EDL AFEYRKVALFKEWKTQKGIVKY+LDQDDSL
Sbjct  1    MNELRTTNQPLYNKFKRYAKLLLKPEEDLEAFEYRKVALFKEWKTQKGIVKYILDQDDSL  60

Query  101  NDAYQYINQLRFKLKHNDYEGFIHELKHMPLSQTHLVVQRAIKTLNKHAYFIKNTFDYYN  160
            NDAYQYINQLRFKLKHNDYEGFIHELKHMPLSQ+H  VQRAIKTLNKHAYFIKNTFDYYN
Sbjct  61   NDAYQYINQLRFKLKHNDYEGFIHELKHMPLSQAHSFVQRAIKTLNKHAYFIKNTFDYYN  120

Query  161  LSNGPLEGINNKIKLIKRTSFSYGNYNHLRNRILLCSKLYAPKSKRKLSNV  211
            LSNGPLEGINNKIKLIKR SF+YG+YNHLRNRILLCSKLYAPKSK+ + + 
Sbjct  121  LSNGPLEGINNKIKLIKRISFGYGSYNHLRNRILLCSKLYAPKSKKEVKQC  171

4) SAPIG2207 in NC_017333


> U10927|40|G40|16579858|AAL26673.1|Staphylococcus_aureus_M|-|31018..31542|tnp|-|transposase
Length=174

 Score =  260 bits (973),  Expect = 3e-71, Method: Compositional matrix adjust.
 Identities = 156/171 (92%), Positives = 163/171 (96%), Gaps = 0/171 (0%)

Query  41   MNELRTTNQPLYNKFKRYAKLLLKPGEDLGAFEYRKVALFKEWKTQKGIVKYLLDQDDSL  100
            MNELRTTNQPLYNKFKRYAKLLLKP EDL AFEYRKVALFKEWKTQKGIVKY+LDQDDSL
Sbjct  1    MNELRTTNQPLYNKFKRYAKLLLKPEEDLEAFEYRKVALFKEWKTQKGIVKYILDQDDSL  60

Query  101  NDAYQYINQLRFKLKHNDYEGFIHELKHMPLSQTHLVVQRAIKTLNKHAYFIKNTFDYYN  160
            NDAYQYINQLRFKLKHNDYEGFIHELKHMPLSQ+H  VQRAIKTLNKHAYFIKNTFDYYN
Sbjct  61   NDAYQYINQLRFKLKHNDYEGFIHELKHMPLSQAHSFVQRAIKTLNKHAYFIKNTFDYYN  120

Query  161  LSNGPLEGINNKIKLIKRTSFSYGNYNHLRNRILLCSKLYAPKSKRKLSNV  211
            LSNGPLEGINNKIKLIKR SF+YG+YNHLRNRILLCSKLYAPKSK+ + + 
Sbjct  121  LSNGPLEGINNKIKLIKRISFGYGSYNHLRNRILLCSKLYAPKSKKEVKQC  171

5) tnp in NC_007168


> U10927|40|G40|16579858|AAL26673.1|Staphylococcus_aureus_M|-|31018..31542|tnp|-|transposase
Length=174

 Score =  162 bits (600),  Expect = 8e-42, Method: Compositional matrix adjust.
 Identities = 101/174 (59%), Positives = 138/174 (80%), Gaps = 0/174 (0%)

Query  1    MNCYRASNRPLYNKYKSYWKLFLKPFETLEAFNYRKVHLFKEWKTEKGIVNYLLDVDEEL  60
            MN  R++N+PLYNK+K Y KL+LKP E LEAF+YRKV LFKEWKT+KGIV+Y+LD D+ L
Sbjct  1    MNELRTTNQPLYNKFKRYAKLLLKPEEDLEAFEYRKVALFKEWKTQKGIVKYILDQDDSL  60

Query  61   YNTYHYVHELRRFLKENQIEKFNHKLFSIHLSDVCPKLRPVIRTLRRLATFIENTMTYSN  120
             ++Y+Y+++LR  LK+N+ E F H L  + LS+  + ++  I+TL + A FI NT  Y N
Sbjct  61   NDAYQYINQLRFKLKHNDYEGFIHELKHMPLSQAHSFVQRAIKTLNKHAYFIKNTFDYYN  120

Query  121  LTNGPLEGINNKIKLIKRVSFGYRNYDNLRNRIIITSRLFASTTKKEIKQPKVA  174
            L+NGPLEGINNKIKLIKR+SFGY +Y++LRNRI++ S+L+A+ +KKE+KQ  VA
Sbjct  121  LSNGPLEGINNKIKLIKRISFGYGSYNHLRNRILLCSKLYAPKSKKEVKQCLVA  174

6) tnp in NC_007168


> U10927|40|G40|16579858|AAL26673.1|Staphylococcus_aureus_M|-|31018..31542|tnp|-|transposase
Length=174

 Score =  160 bits (590),  Expect = 5e-41, Method: Compositional matrix adjust.
 Identities = 95/166 (58%), Positives = 133/166 (81%), Gaps = 0/166 (0%)

Query  46   RTSNRPLYNKYKSYWKLFLKPFETLEAFNYHKVHLFKEWKTEKGIINYLLGVDVELFNTY  105
            RT+N+PLYNK+K Y KL+LKP E LEAF+Y+KV LFKEWKT+KGI++Y+L+ D  L ++Y
Sbjct  5    RTTNQPLYNKFKRYAKLLLKPEEDLEAFEYRKVALFKEWKTQKGIVKYILDQDDSLNDAY  64

Query  106  HYVHELRRLLKENQIEKFNHKLFSIHLSDVCPKLRPVIRTLRRLAAFIENTMTYSNLTNG  165
            +Y+++LR  LK+N+ E F H L  + LS+  + ++  I+TL + A FI NT  Y NL+NG
Sbjct  65   QYINQLRFKLKHNDYEGFIHELKHMPLSQAHSFVQRAIKTLNKHAYFIKNTFDYYNLSNG  124

Query  166  PLEGINNKIKLIKRVSFGYRNYDNLRNRIIITSRLFASTTKKEIKQ  211
            PLEGINNKIKLIKR+SFGY +Y++LRNRI++ S+L+A+ +KKE+KQ
Sbjct  125  PLEGINNKIKLIKRISFGYGSYNHLRNRILLCSKLYAPKSKKEVKQ  170

7) tnp in NC_007168


> U10927|40|G40|16579858|AAL26673.1|Staphylococcus_aureus_M|-|31018..31542|tnp|-|transposase
Length=174

 Score =  158 bits (582),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 94/166 (57%), Positives = 133/166 (81%), Gaps = 0/166 (0%)

Query  5    RTSNRPLYNKYKSYWKLFLKPFETLEAFNYHKVHLFKEWKTEKGIINYLLGVDVELFNTY  64
            RT+N+PLYNK+K Y KL+LKP E LEAF+Y+KV LFKEWKT+KGI++Y+L+ D  L ++Y
Sbjct  5    RTTNQPLYNKFKRYAKLLLKPEEDLEAFEYRKVALFKEWKTQKGIVKYILDQDDSLNDAY  64

Query  65   HYVHELRRLLKENQIEKFNHKLFSIHLSDVCPKLRPVIRTLRRLATFIENTMTYSNLTNG  124
            +Y+++LR  LK+N+ E F H L  + LS+  + ++  I+TL + A FI NT  Y NL+NG
Sbjct  65   QYINQLRFKLKHNDYEGFIHELKHMPLSQAHSFVQRAIKTLNKHAYFIKNTFDYYNLSNG  124

Query  125  PLEGINNKIKLIKRVSFGYRNYDNLRNRIIITSRLFASTTKKEIKK  170
            PLEGINNKIKLIKR+SFGY +Y++LRNRI++ S+L+A+ +KKE+K+
Sbjct  125  PLEGINNKIKLIKRISFGYGSYNHLRNRILLCSKLYAPKSKKEVKQ  170