Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of HPB8_735 gene of NC_014256_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) HPB8_735
( YP_003728756.1 )

hypothetical protein

NC_014256
(Helicobacter pylori B8)

3e-90

100

2) HPELS_03885
( YP_005424897.1 )

hypothetical protein

NC_017063
(Helicobacter pylori ELS37)

3e-80

3) HPSJM_02730
( YP_003928459.1 )

hypothetical protein

NC_014560
(Helicobacter pylori SJM180)

4e-78

4) HPSA_02485
( YP_005771115.1 )

hypothetical protein

NC_017361
(Helicobacter pylori SouthAfrica7)

1e-77

• Sequence Alignments

1) HPB8_735 in NC_014256


> NC_014256_P1|40|G40|298736230|YP_003728756.1|Helicobacter_pylori_B8|+|41885..42493|-|HPB8_735|hypothetical 
protein
Length=202

 Score =  324 bits (1215),  Expect = 3e-90, Method: Compositional matrix adjust.
 Identities = 202/202 (100%), Positives = 202/202 (100%), Gaps = 0/202 (0%)

Query  1    MERIEDIGEFTLFCLHAFGDGLNLNELSQVTEIDPITIQKHLDFLVKRGFVNEKHKISVC  60
            MERIEDIGEFTLFCLHAFGDGLNLNELSQVTEIDPITIQKHLDFLVKRGFVNEKHKISVC
Sbjct  1    MERIEDIGEFTLFCLHAFGDGLNLNELSQVTEIDPITIQKHLDFLVKRGFVNEKHKISVC  60

Query  61   GCNILKLHDEINKFNRTNRVVFLENAVREKVKRWRERQELTDRSCGWLIAGEDLSLQEFE  120
            GCNILKLHDEINKFNRTNRVVFLENAVREKVKRWRERQELTDRSCGWLIAGEDLSLQEFE
Sbjct  61   GCNILKLHDEINKFNRTNRVVFLENAVREKVKRWRERQELTDRSCGWLIAGEDLSLQEFE  120

Query  121  ELYNARKDIDRVLCLLDNTKDFKDVSDEIRVRLEPKKVERFLVFKINPKALTPTKIERKT  180
            ELYNARKDIDRVLCLLDNTKDFKDVSDEIRVRLEPKKVERFLVFKINPKALTPTKIERKT
Sbjct  121  ELYNARKDIDRVLCLLDNTKDFKDVSDEIRVRLEPKKVERFLVFKINPKALTPTKIERKT  180

Query  181  YARAIHGEQECFIEIETLCKQL  202
            YARAIHGEQECFIEIETLCKQL
Sbjct  181  YARAIHGEQECFIEIETLCKQL  202

2) HPELS_03885 in NC_017063


> NC_014256_P1|40|G40|298736230|YP_003728756.1|Helicobacter_pylori_B8|+|41885..42493|-|HPB8_735|hypothetical 
protein
Length=202

 Score =  291 bits (1088),  Expect = 3e-80, Method: Compositional matrix adjust.
 Identities = 184/202 (92%), Positives = 191/202 (95%), Gaps = 0/202 (0%)

Query  23   LERIEDIGEFTLFCLHAFGDGLNLNELSQVTEIDPITIQKHLDFLVKRGFVNEKHKISAY  82
            +ERIEDIGEFTLFCLHAFGDGLNLNELSQVTEIDPITIQKHLDFLVKRGFVNEKHKIS  
Sbjct  1    MERIEDIGEFTLFCLHAFGDGLNLNELSQVTEIDPITIQKHLDFLVKRGFVNEKHKISVC  60

Query  83   GRNILKLHDEINKFNRANRVVFLENAAREKIKRWRERQELTDCSRGWLIAGEDLSLQEFE  142
            G NILKLHDEINKFNR+NRVVFLENA REK+KRWRERQELTD S GWLIAGEDLSLQEFE
Sbjct  61   GCNILKLHDEINKFNRTNRVVFLENAVREKVKRWRERQELTDRSCGWLIAGEDLSLQEFE  120

Query  143  ELYNARKDIDQVLRLLDNAKDFKDVSDEIRVHLEPKKVERFLVFKINPKVLTHAKIEGKT  202
            ELYNARKDID+VL LLDN+KDFKDVSDEIRV+LEPKKVERFLVFKINPK LT +KIE KT
Sbjct  121  ELYNARKDIDRVLCLLDNTKDFKDVSDEIRVRLEPKKVERFLVFKINPKALTPTKIERKT  180

Query  203  YIRAIHGEQECFIEIETLCKQL  224
            Y RAIHGEQECFIEIETLCKQL
Sbjct  181  YARAIHGEQECFIEIETLCKQL  202

3) HPSJM_02730 in NC_014560


> NC_014256_P1|40|G40|298736230|YP_003728756.1|Helicobacter_pylori_B8|+|41885..42493|-|HPB8_735|hypothetical 
protein
Length=202

 Score =  284 bits (1062),  Expect = 4e-78, Method: Compositional matrix adjust.
 Identities = 180/202 (90%), Positives = 189/202 (94%), Gaps = 0/202 (0%)

Query  23   LERIEDIGEFTLFCLHAFGDGLNLNELSQVTEIDFMTIQKHLDFLVKRGFFNEKHKISAY  82
            +ERIEDIGEFTLFCLHAFGDGLNLNELSQVTEID +TIQKHLDFLVKRGF NEKHKIS  
Sbjct  1    MERIEDIGEFTLFCLHAFGDGLNLNELSQVTEIDPITIQKHLDFLVKRGFVNEKHKISVC  60

Query  83   GRNILKLHDEINKFNRANRVVFLENAAREKIKRWRERQELTDCSRGWLIAGEDLSLQEFE  142
            G NILKLHDEINKFNR+NRVVFLENA REK+KRWRERQELTD S GWLIAGEDLSLQEFE
Sbjct  61   GCNILKLHDEINKFNRTNRVVFLENAVREKVKRWRERQELTDRSCGWLIAGEDLSLQEFE  120

Query  143  ELYNARKDIDQVLCLLDNTKDFKDVSDEIKVRLEPNGVEQFLVFKINPKVLTHAKIEGKT  202
            ELYNARKDID+VLCLLDNTKDFKDVSDEI+VRLEP+ VE+FLVFKINPK LT +KIE KT
Sbjct  121  ELYNARKDIDRVLCLLDNTKDFKDVSDEIRVRLEPKKVERFLVFKINPKALTPTKIERKT  180

Query  203  YIRAIHGEQECFIEIETLCKQL  224
            Y RAIHGEQECFIEIETLCKQL
Sbjct  181  YARAIHGEQECFIEIETLCKQL  202

4) HPSA_02485 in NC_017361


> NC_014256_P1|40|G40|298736230|YP_003728756.1|Helicobacter_pylori_B8|+|41885..42493|-|HPB8_735|hypothetical 
protein
Length=202

 Score =  282 bits (1056),  Expect = 1e-77, Method: Compositional matrix adjust.
 Identities = 168/202 (84%), Positives = 186/202 (93%), Gaps = 0/202 (0%)

Query  23   LERIEDVGEFTLFCLRAFGDGLNLNELSQVTEINPITIQKHLDFLVKRGFVNERHKISTY  82
            +ERIED+GEFTLFCL+AFGDGLNLNELSQVTEI+PITIQKHLDFLVKRGFVNE+HKIS  
Sbjct  1    MERIEDIGEFTLFCLHAFGDGLNLNELSQVTEIDPITIQKHLDFLVKRGFVNEKHKISVC  60

Query  83   GQTVLKLHDEINKFNRTDRVVFLENAVREKVKRWREYEELAAHHRGWLIAGEDLNPQEFK  142
            G  +LKLHDEINKFNRT+RVVFLENAVREKVKRWRE +EL+ +  GWLIAGEDL+ QEF 
Sbjct  61   GCNILKLHDEINKFNRTNRVVFLENAVREKVKRWRERQELTDRSCGWLIAGEDLSLQEFE  120

Query  143  ELYNARKDINQVLCLLDNVKDFKDVSDEIRVRLEPKEIERFLVFKIDSKALTPTKIEGKT  202
            ELYNARKDI++VLCLLDN KDFKDVSDEIRVRLEPK +ERFLVFKI++KALTPTKIE KT
Sbjct  121  ELYNARKDIDRVLCLLDNTKDFKDVSDEIRVRLEPKKVERFLVFKINPKALTPTKIERKT  180

Query  203  YVRATHGDQECFMEAETLCKQL  224
            Y RA HG+QECF+E ETLCKQL
Sbjct  181  YARAIHGEQECFIEIETLCKQL  202