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Homologs of YpsIP31758_3724 gene of NC_009708_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) YpsIP31758_3724
( YP_001402678.1 )

DNA binding protein

NC_009708
(Yersinia pseudotuberculosis IP 31758)

6e-52

100

2) YE3496A
( YP_001007657.1 )

putative DNA-binding protein

NC_008800
(Yersinia enterocolitica 8081)

5e-48

3) Dd586_0878
( YP_003332469.1 )

XRE family transcriptional regulator

NC_013592
(Dickeya dadantii Ech586)

1e-22

4) Dda3937_04485
( YP_003881778.1 )

hypothetical protein

NC_014500
(Dickeya dadantii 3937)

8e-23

5) CFSAN002050_16840
( YP_008261266.1 )

XRE family transcriptional regulator

NC_021818
(Salmonella enterica CFSAN002050)

2e-22

6) CFSAN002050_16845
( YP_008261267.1 )

XRE family transcriptional regulator

NC_021818
(Salmonella enterica CFSAN002050)

3e-22

7) Dda3937_03632
( YP_003881777.1 )

hypothetical protein

NC_014500
(Dickeya dadantii 3937)

3e-22

8) Dd586_0877
( YP_003332468.1 )

XRE family transcriptional regulator

NC_013592
(Dickeya dadantii Ech586)

3e-22

9) Dd586_1467
( YP_003333040.1 )

XRE family transcriptional regulator

NC_013592
(Dickeya dadantii Ech586)

1e-21

10) Dd1591_1497
( YP_003003834.1 )

XRE family transcriptional regulator

NC_012912
(Dickeya zeae Ech1591)

1e-21

11) Dda3937_02761
( YP_003883701.1 )

transcriptional regulator

NC_014500
(Dickeya dadantii 3937)

1e-21

12) Dd586_3769
( YP_003335305.1 )

XRE family transcriptional regulator

NC_013592
(Dickeya dadantii Ech586)

1e-21

13) PCC21_037330
( YP_006648389.1 )

hypothetical protein

NC_018525
(Pectobacterium carotovorum PCC21)

1e-20

14) Dd703_3225
( YP_002988810.1 )

XRE family transcriptional regulator

NC_012880
(Dickeya dadantii Ech703)

1e-19

15) plu4472
( NP_931638.1 )

hypothetical protein

NC_005126
(Photorhabdus luminescens TTO1)

3e-19

16) EPYR_00430
( YP_005801181.1 )

transcriptional regulator

NC_017390
(Erwinia pyrifoliae DSM 12163)

4e-19

17) EpC_04120
( YP_002647449.1 )

transcriptional regulator

NC_012214
(Erwinia pyrifoliae Ep1/96)

4e-19

18) EAM_3011
( YP_003540077.1 )

DNA-binding protein

NC_013971
(Erwinia amylovora ATCC 49946)

5e-19

19) EAMY_0409
( YP_003529767.1 )

transcriptional regulator

NC_013961
(Erwinia amylovora CFBP1430)

5e-19

20) ecoO109IREP
( YP_003043098.1 )

putative transcriptional regulator

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

8e-19

21) Dd1591_1498
( YP_003003835.1 )

XRE family transcriptional regulator

NC_012912
(Dickeya zeae Ech1591)

2e-17

22) Dda3937_02762
( YP_003883700.1 )

transcriptional regulator

NC_014500
(Dickeya dadantii 3937)

2e-17

23) Dd586_1468
( YP_003333041.1 )

XRE family transcriptional regulator

NC_013592
(Dickeya dadantii Ech586)

4e-17

24) SARI_03130
( YP_001572112.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

2e-16

25) hipB1
( NP_995417.1 )

putative transcriptional regulator

NC_005814
(Yersinia pestis 91001)

4e-16

26) XNC1_1745
( YP_003711991.1 )

DNA binding protein

NC_014228
(Xenorhabdus nematophila ATCC 19061)

9e-16

27) Dda3937_01732
( YP_003881594.1 )

hypothetical protein

NC_014500
(Dickeya dadantii 3937)

4e-13

• Sequence Alignments

1) YpsIP31758_3724 in NC_009708


> NC_009708_P1|40|G39|153949547|YP_001402678.1|Yersinia_pseudotuberculosis_IP_31758|+|43271..43627|-|YpsIP31758_3724|DNA 
binding 
protein
Length=118

 Score =  197 bits (730),  Expect = 6e-52, Method: Compositional matrix adjust.
 Identities = 118/118 (100%), Positives = 118/118 (100%), Gaps = 0/118 (0%)

Query  1    MNPERLKSARKTAKLSQEKLGVMAGIDEATARSRVSQYEKGFHTPSFELVKKFAMILNVP  60
            MNPERLKSARKTAKLSQEKLGVMAGIDEATARSRVSQYEKGFHTPSFELVKKFAMILNVP
Sbjct  1    MNPERLKSARKTAKLSQEKLGVMAGIDEATARSRVSQYEKGFHTPSFELVKKFAMILNVP  60

Query  61   ECYFYIVDDVFAAAVLQMYHTHQVPFLQHPDYEKLKQAEKLVDQLQKLIVELTNNSLR  118
            ECYFYIVDDVFAAAVLQMYHTHQVPFLQHPDYEKLKQAEKLVDQLQKLIVELTNNSLR
Sbjct  61   ECYFYIVDDVFAAAVLQMYHTHQVPFLQHPDYEKLKQAEKLVDQLQKLIVELTNNSLR  118

2) YE3496A in NC_008800


> NC_009708_P1|40|G39|153949547|YP_001402678.1|Yersinia_pseudotuberculosis_IP_31758|+|43271..43627|-|YpsIP31758_3724|DNA 
binding 
protein
Length=118

 Score =  183 bits (680),  Expect = 5e-48, Method: Compositional matrix adjust.
 Identities = 105/118 (89%), Positives = 115/118 (98%), Gaps = 0/118 (0%)

Query  1    MNPERLKSARKTAKLSQEKLGVLAGIDEATARSRVSQYEKGFHTPSFDLIKKFAVILNVP  60
            MNPERLKSARKTAKLSQEKLGV+AGIDEATARSRVSQYEKGFHTPSF+L+KKFA+ILNVP
Sbjct  1    MNPERLKSARKTAKLSQEKLGVMAGIDEATARSRVSQYEKGFHTPSFELVKKFAMILNVP  60

Query  61   ECYFYIVDDVFAEAVLEMYHTHQMPYLQHPDYEKLKQAEKLVEQLQKLIHDLTNKSHR  118
            ECYFYIVDDVFA AVL+MYHTHQ+P+LQHPDYEKLKQAEKLV+QLQKLI +LTN+S R
Sbjct  61   ECYFYIVDDVFAAAVLQMYHTHQVPFLQHPDYEKLKQAEKLVDQLQKLIVELTNNSLR  118

3) Dd586_0878 in NC_013592


> NC_009708_P1|40|G39|153949547|YP_001402678.1|Yersinia_pseudotuberculosis_IP_31758|+|43271..43627|-|YpsIP31758_3724|DNA 
binding 
protein
Length=118

 Score =  100 bits (361),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 53/83 (64%), Positives = 66/83 (80%), Gaps = 0/83 (0%)

Query  1   MLPARLKTARLRADLTQEKLGVLAGIEEETARSRVSQYEGGIHRPTFEMMCAFAKVLNVP  60
           M P RLK+AR  A L+QEKLGV+AGI+E TARSRVSQYE G+H P+FE++  FA +LNVP
Sbjct  1   MNPERLKSARKTAKLSQEKLGVMAGIDEATARSRVSQYEKGFHTPSFELVKKFAMILNVP  60

Query  61  ECYFYTVNDDFADMILELYLKHQ  83
           ECYFY V+D FA  +L++Y  HQ
Sbjct  61  ECYFYIVDDVFAAAVLQMYHTHQ  83

4) Dda3937_04485 in NC_014500


> NC_009708_P1|40|G39|153949547|YP_001402678.1|Yersinia_pseudotuberculosis_IP_31758|+|43271..43627|-|YpsIP31758_3724|DNA 
binding 
protein
Length=118

 Score =  100 bits (362),  Expect = 8e-23, Method: Compositional matrix adjust.
 Identities = 54/83 (66%), Positives = 66/83 (80%), Gaps = 0/83 (0%)

Query  1   MLPARLKTARLRADLTQEKLGVLAGIEEETARSRVSQYEGGIHRPTFEMMCAFAKVLNVP  60
           M P RLK+AR  A L+QEKLGV+AGI+E TARSRVSQYE G+H P+FE++  FA +LNVP
Sbjct  1   MNPERLKSARKTAKLSQEKLGVMAGIDEATARSRVSQYEKGFHTPSFELVKKFAMILNVP  60

Query  61  ECYFYTVNDDFAEMVLELYLKHQ  83
           ECYFY V+D FA  VL++Y  HQ
Sbjct  61  ECYFYIVDDVFAAAVLQMYHTHQ  83

5) CFSAN002050_16840 in NC_021818


> NC_009708_P1|40|G39|153949547|YP_001402678.1|Yersinia_pseudotuberculosis_IP_31758|+|43271..43627|-|YpsIP31758_3724|DNA 
binding 
protein
Length=118

 Score = 99.1 bits (357),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 54/83 (66%), Positives = 67/83 (81%), Gaps = 0/83 (0%)

Query  15  MLPVRLKIARLRANLTQEKLGVLAGIEEATARSRISQYESGIHRPTFEMMCAFARVLNVP  74
           M P RLK AR  A+L+QEKLGV+AGI+EATARSR+SQYE G+H P+FE++  FA +LNVP
Sbjct  1   MNPERLKSARKTAKLSQEKLGVMAGIDEATARSRVSQYEKGFHTPSFELVKKFAMILNVP  60

Query  75  ECYFYTVDDDFAEAVLDLYSRWE  97
           ECYFY VDD FA AVL++Y   +
Sbjct  61  ECYFYIVDDVFAAAVLQMYHTHQ  83

6) CFSAN002050_16845 in NC_021818


> NC_009708_P1|40|G39|153949547|YP_001402678.1|Yersinia_pseudotuberculosis_IP_31758|+|43271..43627|-|YpsIP31758_3724|DNA 
binding 
protein
Length=118

 Score = 98.3 bits (354),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 53/83 (64%), Positives = 66/83 (80%), Gaps = 0/83 (0%)

Query  1   MLPVRLKTARLHARLTQEKLGVLAGIEEETARSRVSQYEGGVHRPTFEMMCAFARVLNVP  60
           M P RLK+AR  A+L+QEKLGV+AGI+E TARSRVSQYE G H P+FE++  FA +LNVP
Sbjct  1   MNPERLKSARKTAKLSQEKLGVMAGIDEATARSRVSQYEKGFHTPSFELVKKFAMILNVP  60

Query  61  ECYFYAVNDNFAEMVLELYQKYQ  83
           ECYFY V+D FA  VL++Y+  Q
Sbjct  61  ECYFYIVDDVFAAAVLQMYHTHQ  83

7) Dda3937_03632 in NC_014500


> NC_009708_P1|40|G39|153949547|YP_001402678.1|Yersinia_pseudotuberculosis_IP_31758|+|43271..43627|-|YpsIP31758_3724|DNA 
binding 
protein
Length=118

 Score = 98.3 bits (354),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 52/86 (61%), Positives = 68/86 (80%), Gaps = 0/86 (0%)

Query  1   MLPIRLKTARLQANLTQEKLGVLAGIEEATARSRISQYESGIHRPTFEMMCAFAKVLNVP  60
           M P RLK+AR  A+L+QEKLGV+AGI+EATARSR+SQYE G+H P+FE++  FA +LNVP
Sbjct  1   MNPERLKSARKTAKLSQEKLGVMAGIDEATARSRVSQYEKGFHTPSFELVKKFAMILNVP  60

Query  61  ECYFYTVDDDFAEIILKLHNGEMVQW  86
           ECYFY VDD FA  +L++ + + V  
Sbjct  61  ECYFYIVDDVFAAAVLQMYHTHQVPF  86

8) Dd586_0877 in NC_013592


> NC_009708_P1|40|G39|153949547|YP_001402678.1|Yersinia_pseudotuberculosis_IP_31758|+|43271..43627|-|YpsIP31758_3724|DNA 
binding 
protein
Length=118

 Score = 98.3 bits (354),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 52/86 (61%), Positives = 68/86 (80%), Gaps = 0/86 (0%)

Query  1   MLPIRLKTARLQANLTQEKLGVLAGIEEATARSRISQYESGIHRPTFEMMCAFAKVLNVP  60
           M P RLK+AR  A+L+QEKLGV+AGI+EATARSR+SQYE G+H P+FE++  FA +LNVP
Sbjct  1   MNPERLKSARKTAKLSQEKLGVMAGIDEATARSRVSQYEKGFHTPSFELVKKFAMILNVP  60

Query  61  ECYFYTVDDDFAEIILKLHNGEMVQW  86
           ECYFY VDD FA  +L++ + + V  
Sbjct  61  ECYFYIVDDVFAAAVLQMYHTHQVPF  86

9) Dd586_1467 in NC_013592


> NC_009708_P1|40|G39|153949547|YP_001402678.1|Yersinia_pseudotuberculosis_IP_31758|+|43271..43627|-|YpsIP31758_3724|DNA 
binding 
protein
Length=118

 Score = 96.8 bits (348),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 52/83 (63%), Positives = 68/83 (82%), Gaps = 0/83 (0%)

Query  1   MIPKRLKEARLHAKLTQEKLGVLAGLEEATAYSRLSHYENGTHKPTFELVCEFARVLDVP  60
           M P RLK AR  AKL+QEKLGV+AG++EATA SR+S+YE+G H P+FELV  FA +L+VP
Sbjct  1   MNPERLKSARKTAKLSQEKLGVMAGIDEATARSRVSQYEKGFHTPSFELVKKFAMILNVP  60

Query  61  ECYFYIVDDQFAQDVLELFRSKR  83
           ECYFYIVDD FA  VL+++++ +
Sbjct  61  ECYFYIVDDVFAAAVLQMYHTHQ  83

10) Dd1591_1497 in NC_012912


> NC_009708_P1|40|G39|153949547|YP_001402678.1|Yersinia_pseudotuberculosis_IP_31758|+|43271..43627|-|YpsIP31758_3724|DNA 
binding 
protein
Length=118

 Score = 96.8 bits (348),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 52/83 (63%), Positives = 68/83 (82%), Gaps = 0/83 (0%)

Query  1   MIPKRLKEARLHAKLTQEKLGVLAGLEEATAYSRLSHYENGTHKPTFELVCEFARVLDVP  60
           M P RLK AR  AKL+QEKLGV+AG++EATA SR+S+YE+G H P+FELV  FA +L+VP
Sbjct  1   MNPERLKSARKTAKLSQEKLGVMAGIDEATARSRVSQYEKGFHTPSFELVKKFAMILNVP  60

Query  61  ECYFYIVDDQFAQDVLELFRSKR  83
           ECYFYIVDD FA  VL+++++ +
Sbjct  61  ECYFYIVDDVFAAAVLQMYHTHQ  83

11) Dda3937_02761 in NC_014500


> NC_009708_P1|40|G39|153949547|YP_001402678.1|Yersinia_pseudotuberculosis_IP_31758|+|43271..43627|-|YpsIP31758_3724|DNA 
binding 
protein
Length=118

 Score = 96.5 bits (347),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 52/85 (62%), Positives = 68/85 (80%), Gaps = 0/85 (0%)

Query  1   MIPKRLKEARLHAKLTQEKLGVLAGLEEATAYSRLSHYENGTHKPTFELVCEFARVLDVP  60
           M P RLK AR  AKL+QEKLGV+AG++EATA SR+S+YE+G H P+FELV  FA +L+VP
Sbjct  1   MNPERLKSARKTAKLSQEKLGVMAGIDEATARSRVSQYEKGFHTPSFELVKKFAMILNVP  60

Query  61  ECYFYIVDDQFAQDVLELFRRKKIG  85
           ECYFYIVDD FA  VL++++  ++ 
Sbjct  61  ECYFYIVDDVFAAAVLQMYHTHQVP  85

12) Dd586_3769 in NC_013592


> NC_009708_P1|40|G39|153949547|YP_001402678.1|Yersinia_pseudotuberculosis_IP_31758|+|43271..43627|-|YpsIP31758_3724|DNA 
binding 
protein
Length=118

 Score = 96.2 bits (346),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 48/85 (57%), Positives = 68/85 (80%), Gaps = 0/85 (0%)

Query  1   MLPHRLKAARLMAGLSQERLGILAGIDEATASARMNQYERGIHTPDFELARRLAAVLHVP  60
           M P+RLK+AR  A LSQE+LG++AGIDEATA +R++QYE+G+HTP FEL +++A +L+VP
Sbjct  1   MNPERLKSARKTAKLSQEKLGVMAGIDEATARSRVSQYEKGFHTPSFELVKKFAMILNVP  60

Query  61  ACYFYTVEDDLAEMILSFYDTKENP  85
            CYFY V+D +A  +L  Y+T + P
Sbjct  61  ECYFYIVDDVFAAAVLQMYHTHQVP  85

13) PCC21_037330 in NC_018525


> NC_009708_P1|40|G39|153949547|YP_001402678.1|Yersinia_pseudotuberculosis_IP_31758|+|43271..43627|-|YpsIP31758_3724|DNA 
binding 
protein
Length=118

 Score = 93.1 bits (334),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 51/84 (61%), Positives = 67/84 (80%), Gaps = 0/84 (0%)

Query  12  MLPTRLKAARLRAKITQEKLGVLSGIEEATARSRVSQYESGTHRPTFEMMCSFARVLNVP  71
           M P RLK+AR  AK++QEKLGV++GI+EATARSRVSQYE G H P+FE++  FA +LNVP
Sbjct  1   MNPERLKSARKTAKLSQEKLGVMAGIDEATARSRVSQYEKGFHTPSFELVKKFAMILNVP  60

Query  72  ESYFYTLDDEFAERILKLYEDEVV  95
           E YFY +DD FA  +L++Y+ + V
Sbjct  61  ECYFYIVDDVFAAAVLQMYHTHQV  84

14) Dd703_3225 in NC_012880


> NC_009708_P1|40|G39|153949547|YP_001402678.1|Yersinia_pseudotuberculosis_IP_31758|+|43271..43627|-|YpsIP31758_3724|DNA 
binding 
protein
Length=118

 Score = 89.7 bits (321),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 54/91 (60%), Positives = 66/91 (73%), Gaps = 0/91 (0%)

Query  1   MIPERLKNARLRANLTQEQLGVLAGIGEETAYSRLSQYESGTHTPSFKTVCAFAHALNVP  60
           M PERLK+AR  A+L+QE+LGV+AGI+E TA SR+SQYE G HTPSF  V  FA  LNVP
Sbjct  1   MNPERLKSARKTAKLSQEKLGVMAGIDEATARSRVSQYEKGFHTPSFELVKKFAMILNVP  60

Query  61  ESYFYTVDDSFAEAILTLYAGETVRWQRTPE  91
           E YFY VDD FA A+L +Y  + V   + P+
Sbjct  61  ECYFYIVDDVFAAAVLQMYHTHQVPFLQHPD  91

15) plu4472 in NC_005126


> NC_009708_P1|40|G39|153949547|YP_001402678.1|Yersinia_pseudotuberculosis_IP_31758|+|43271..43627|-|YpsIP31758_3724|DNA 
binding 
protein
Length=118

 Score = 88.6 bits (317),  Expect = 3e-19, Method: Compositional matrix adjust.
 Identities = 44/83 (54%), Positives = 66/83 (80%), Gaps = 0/83 (0%)

Query  1   MLPHRLKAARLKAGLSQERLGILAGIDEATASTRMNQYERGIHTPDFALACRLASVMGIP  60
           M P+RLK+AR  A LSQE+LG++AGIDEATA +R++QYE+G+HTP F L  ++A ++ +P
Sbjct  1   MNPERLKSARKTAKLSQEKLGVMAGIDEATARSRVSQYEKGFHTPSFELVKKFAMILNVP  60

Query  61  ACYFYVVEDDLAEIILEYANTRQ  83
            CYFY+V+D +A  +L+  +T+Q
Sbjct  61  ECYFYIVDDVFAAAVLQMYHTHQ  83

16) EPYR_00430 in NC_017390


> NC_009708_P1|40|G39|153949547|YP_001402678.1|Yersinia_pseudotuberculosis_IP_31758|+|43271..43627|-|YpsIP31758_3724|DNA 
binding 
protein
Length=118

 Score = 88.1 bits (315),  Expect = 4e-19, Method: Compositional matrix adjust.
 Identities = 46/83 (56%), Positives = 66/83 (80%), Gaps = 1/83 (1%)

Query  1   MLPHRLKEARLKKGLSQQKLGVLAGIDEATASARMNQYERGIHVPDFELVCRLAAVLDVP  60
           M P+RLK AR    LSQ+KLGV+AGIDEATA +R++QYE+G+H P FELV ++A +L+VP
Sbjct  1   MNPERLKSARKTAKLSQEKLGVMAGIDEATARSRVSQYEKGFHTPSFELVKKFAMILNVP  60

Query  61  SCYLYTLEDELAALVL-LWHAQR  82
            CY+Y ++D +AA VL + H+++
Sbjct  61  ECYFYIVDDVFAAAVLQMYHTHQ  83

17) EpC_04120 in NC_012214


> NC_009708_P1|40|G39|153949547|YP_001402678.1|Yersinia_pseudotuberculosis_IP_31758|+|43271..43627|-|YpsIP31758_3724|DNA 
binding 
protein
Length=118

 Score = 88.1 bits (315),  Expect = 4e-19, Method: Compositional matrix adjust.
 Identities = 46/83 (56%), Positives = 66/83 (80%), Gaps = 1/83 (1%)

Query  1   MLPHRLKEARLKKGLSQQKLGVLAGIDEATASARMNQYERGIHVPDFELVCRLAAVLDVP  60
           M P+RLK AR    LSQ+KLGV+AGIDEATA +R++QYE+G+H P FELV ++A +L+VP
Sbjct  1   MNPERLKSARKTAKLSQEKLGVMAGIDEATARSRVSQYEKGFHTPSFELVKKFAMILNVP  60

Query  61  SCYLYTLEDELAALVL-LWHAQR  82
            CY+Y ++D +AA VL + H+++
Sbjct  61  ECYFYIVDDVFAAAVLQMYHTHQ  83

18) EAM_3011 in NC_013971


> NC_009708_P1|40|G39|153949547|YP_001402678.1|Yersinia_pseudotuberculosis_IP_31758|+|43271..43627|-|YpsIP31758_3724|DNA 
binding 
protein
Length=118

 Score = 87.8 bits (314),  Expect = 5e-19, Method: Compositional matrix adjust.
 Identities = 46/83 (56%), Positives = 66/83 (80%), Gaps = 1/83 (1%)

Query  1   MLPHRLKEARLKKGLSQQKLGVLAGIDEATASARMNQYERGIHVPDFELVCRLAAVLDVP  60
           M P+RLK AR    LSQ+KLGV+AGIDEATA +R++QYE+G+H P FELV ++A +L+VP
Sbjct  1   MNPERLKSARKTAKLSQEKLGVMAGIDEATARSRVSQYEKGFHTPSFELVKKFAMILNVP  60

Query  61  SCYLYTLEDDLAALVL-LWHAQR  82
            CY+Y ++D +AA VL + H+++
Sbjct  61  ECYFYIVDDVFAAAVLQMYHTHQ  83

19) EAMY_0409 in NC_013961


> NC_009708_P1|40|G39|153949547|YP_001402678.1|Yersinia_pseudotuberculosis_IP_31758|+|43271..43627|-|YpsIP31758_3724|DNA 
binding 
protein
Length=118

 Score = 87.8 bits (314),  Expect = 5e-19, Method: Compositional matrix adjust.
 Identities = 46/83 (56%), Positives = 66/83 (80%), Gaps = 1/83 (1%)

Query  1   MLPHRLKEARLKKGLSQQKLGVLAGIDEATASARMNQYERGIHVPDFELVCRLAAVLDVP  60
           M P+RLK AR    LSQ+KLGV+AGIDEATA +R++QYE+G+H P FELV ++A +L+VP
Sbjct  1   MNPERLKSARKTAKLSQEKLGVMAGIDEATARSRVSQYEKGFHTPSFELVKKFAMILNVP  60

Query  61  SCYLYTLEDDLAALVL-LWHAQR  82
            CY+Y ++D +AA VL + H+++
Sbjct  61  ECYFYIVDDVFAAAVLQMYHTHQ  83

20) ecoO109IREP in NC_012962


> NC_009708_P1|40|G39|153949547|YP_001402678.1|Yersinia_pseudotuberculosis_IP_31758|+|43271..43627|-|YpsIP31758_3724|DNA 
binding 
protein
Length=118

 Score = 87.0 bits (311),  Expect = 8e-19, Method: Compositional matrix adjust.
 Identities = 48/91 (53%), Positives = 67/91 (74%), Gaps = 1/91 (1%)

Query  5   MINKRLKAARLRANITQEKLGIAAGIDEKSARARVSQYENGTHQPTFEIMCAFSKVLNVP  64
           M   RLK+AR  A+++QEKLG+ AGIDE +AR+RVSQYE+G H P+FE++  F+ +LNVP
Sbjct  1   MNPERLKSARKTAKLSQEKLGVMAGIDEATARSRVSQYEKGFHTPSFELVKKFAMILNVP  60

Query  65  ECYFYTVNDDLADIVLSI-HQILVNYKHAPE  94
           ECYFY V+D +A  VL + H   V + + P+
Sbjct  61  ECYFYIVDDVFAAAVLQMYHTHQVPFLQHPD  91

21) Dd1591_1498 in NC_012912


> NC_009708_P1|40|G39|153949547|YP_001402678.1|Yersinia_pseudotuberculosis_IP_31758|+|43271..43627|-|YpsIP31758_3724|DNA 
binding 
protein
Length=118

 Score = 82.6 bits (294),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 45/86 (53%), Positives = 63/86 (74%), Gaps = 0/86 (0%)

Query  1   MVPQRLRAARERAKISQEELAIAAGISEDTGYSRMSHYENGRHKPKFELICTFAKILDVP  60
           M P+RL++AR  AK+SQE L++ AGI E T+ SR+S+YE+G H P FEL+  FA IL+VP
Sbjct  1   MNPERLKSARKTAKLSQEKLGVMAGIDEATARSRVSQYEKGFHTPSFELVKKFAMILNVP  60

Query  61  EGYFYMLDDSFAEAMLELHAGELVQW  86
           E YFY++DD FA A+L++   + V  
Sbjct  61  ECYFYIVDDVFAAAVLQMYHTHQVPF  86

22) Dda3937_02762 in NC_014500


> NC_009708_P1|40|G39|153949547|YP_001402678.1|Yersinia_pseudotuberculosis_IP_31758|+|43271..43627|-|YpsIP31758_3724|DNA 
binding 
protein
Length=118

 Score = 82.1 bits (292),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 45/86 (53%), Positives = 62/86 (73%), Gaps = 0/86 (0%)

Query  1   MVPQRLRAARERAKISQEELAIAAGISEETGYSRMSHYENGRHKPKFELICTFAKILDVP  60
           M P+RL++AR  AK+SQE L++ AGI E T+ SR+S+YE+G H P FEL+  FA IL+VP
Sbjct  1   MNPERLKSARKTAKLSQEKLGVMAGIDEATARSRVSQYEKGFHTPSFELVKKFAMILNVP  60

Query  61  EGYFYTLDDSFAEAMLELHAGELVQW  86
           E YFY +DD FA A+L++   + V  
Sbjct  61  ECYFYIVDDVFAAAVLQMYHTHQVPF  86

23) Dd586_1468 in NC_013592


> NC_009708_P1|40|G39|153949547|YP_001402678.1|Yersinia_pseudotuberculosis_IP_31758|+|43271..43627|-|YpsIP31758_3724|DNA 
binding 
protein
Length=118

 Score = 81.3 bits (289),  Expect = 4e-17, Method: Compositional matrix adjust.
 Identities = 45/86 (53%), Positives = 62/86 (73%), Gaps = 0/86 (0%)

Query  1   MVPQRLRAARERAKISQEELAIAAGISEETGYSRMSHYENGRHKPKFELICTFAKILDVP  60
           M P+RL++AR  AK+SQE L++ AGI E T+ SR+S+YE+G H P FEL+  FA IL+VP
Sbjct  1   MNPERLKSARKTAKLSQEKLGVMAGIDEATARSRVSQYEKGFHTPSFELVKKFAMILNVP  60

Query  61  EGYFYTLDDSFAEAMLKLHAGELVQW  86
           E YFY +DD FA A+L++   + V  
Sbjct  61  ECYFYIVDDVFAAAVLQMYHTHQVPF  86

24) SARI_03130 in NC_010067


> NC_009708_P1|40|G39|153949547|YP_001402678.1|Yersinia_pseudotuberculosis_IP_31758|+|43271..43627|-|YpsIP31758_3724|DNA 
binding 
protein
Length=118

 Score = 79.2 bits (281),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 44/86 (52%), Positives = 59/86 (69%), Gaps = 0/86 (0%)

Query  1   MIPKRLRIARELADMSQEDLAAAAGVSEETGSSRISHYEHGRHRPKFELVCQLARVLNVP  60
           M P RL+ AR  A +SQE L+  AG+ E T+ SR+S+YE G H P FELV ++A +LNVP
Sbjct  1   MNPERLKSARKTAKLSQEKLGVMAGIDEATARSRVSQYEKGFHTPSFELVKKFAMILNVP  60

Query  61  EGYFYTLDDSFAEAMLKLYAGEIVQW  86
           E YFY +DD FA A+L++Y  + V  
Sbjct  61  ECYFYIVDDVFAAAVLQMYHTHQVPF  86

25) hipB1 in NC_005814


> NC_009708_P1|40|G39|153949547|YP_001402678.1|Yersinia_pseudotuberculosis_IP_31758|+|43271..43627|-|YpsIP31758_3724|DNA 
binding 
protein
Length=118

 Score = 78.1 bits (277),  Expect = 4e-16, Method: Compositional matrix adjust.
 Identities = 50/114 (44%), Positives = 80/114 (71%), Gaps = 2/114 (1%)

Query  1    MVPKRLKEAREAAGLSQEKLSELVGVEGVNPRSRMSNYEAGRFAPPFEFVCRVADVLGYP  60
            M P RLK AR +A LSQEKL+ + G++   +RSR+S+YE G  +P+FE+V + A +L  P
Sbjct  1    MNPERLKSARKTAKLSQEKLGVMAGIDEATARSRVSQYEKGFHTPSFELVKKFAMILNVP  60

Query  61   EYYFYIVNDVTAKLLLRMHRGEQ-NLHEDIEFEAKKMAEQL-EDARKLVAQLTE  112
            E YFYIV+DV A  +L+M + +Q  + ++ ++E  K AE+L ++ +KL+ +LT+
Sbjct  61   ECYFYIVDDVFAAAVLQMYHTHQVPFLQHPDYEKLKQAEKLVDQLQKLIVELTN  114

26) XNC1_1745 in NC_014228


> NC_009708_P1|40|G39|153949547|YP_001402678.1|Yersinia_pseudotuberculosis_IP_31758|+|43271..43627|-|YpsIP31758_3724|DNA 
binding 
protein
Length=118

 Score = 77.1 bits (273),  Expect = 9e-16, Method: Compositional matrix adjust.
 Identities = 39/87 (45%), Positives = 62/87 (72%), Gaps = 1/87 (1%)

Query  1   MNKKRLSESRKALGLSQRELGEKLGLYDEDVAKATISRYERGLNAPAYSTVCQIANILKV  60
           MN  RL  +RK+  LSQ  LG   G+ DE  A++ +S+YE+G+++P++  V ++A IL+V
Sbjct  1   MNPERLKSARKTAKLSQEKLGVMAGI-DEATARSRVSQYEKGFHTPSFELVKKFAMILNV  59

Query  61  PPCYFYIDDDIFAEQVLKLYRKNNTPL  87
           P CYFYI DD+FA  VL++Y+ ++ P+
Sbjct  60  PECYFYIVDDVFAAAVLQMYHTHQVPF  86

27) Dda3937_01732 in NC_014500


> NC_009708_P1|40|G39|153949547|YP_001402678.1|Yersinia_pseudotuberculosis_IP_31758|+|43271..43627|-|YpsIP31758_3724|DNA 
binding 
protein
Length=118

 Score = 67.9 bits (238),  Expect = 4e-13, Method: Compositional matrix adjust.
 Identities = 43/83 (52%), Positives = 55/83 (67%), Gaps = 1/83 (1%)

Query  1   MIGKRLKLARVNAGLTQLELGCRAGLDEETASSRISQYEREVNEPDFGLVCQFAAVLDVP  60
           M   RLK AR  A L+Q  LG  AG+DE TA SR+SQYE+  + P F LV +FA +L+VP
Sbjct  1   MNPERLKSARKTAKLSQEKLGVMAGIDEATARSRVSQYEKGFHTPSFELVKKFAMILNVP  60

Query  61  EAYFYARDEELALIILQ-YHYHK  82
           E YFY  D+ +A  +LQ YH H+
Sbjct  61  ECYFYIVDDVFAAAVLQMYHTHQ  83