Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of hrcS gene of NC_004578_P1

101

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) hrcS
( NP_791221.1 )

type III secretion protein HrcS

NC_004578
(Pseudomonas syringae DC3000)

2e-35

100

2) hrcS
( YP_273543.1 )

type III secretion component protein HrcS

NC_005773
(Pseudomonas syringae 1448A)

5e-27

3) D781_3937
( YP_007346312.1 )

type III secretion protein, HrpO family

NC_020064
(Serratia marcescens FGI94)

1e-22

4) Ser39006_2920
( YP_008523302.1 )

type III secretion protein, HrpO family

NC_022268
(Serratia sp. ATCC 39006)

3e-22

5) HrcS
( YP_234299.1 )

type III secretion protein HrcS

NC_007005
(Pseudomonas syringae B728a)

4e-22

6) H045_00195
( YP_007395611.1 )

type III secretion protein RscS

NC_020209
(Pseudomonas poae RE*1-1-14)

2e-21

7) rscS
( YP_006322232.1 )

type III secretion protein RscS

NC_017911
(Pseudomonas fluorescens A506)

2e-21

8) Pmen_0047
( YP_001185553.1 )

HrpO family type III secretion protein

NC_009439
(Pseudomonas mendocina ymp)

7e-20

9) PSEBR_a5381
( YP_004356891.1 )

type III secretion protein

NC_015379
(Pseudomonas brassicacearum NFM421)

3e-19

10) hrcS
( YP_005210968.1 )

protein HrcS

NC_016830
(Pseudomonas fluorescens F113)

3e-19

11) hrcS
( YP_001906462.1 )

HrcS protein

NC_010694
(Erwinia tasmaniensis Et1/99)

2e-16

12) hrcS
( YP_005804092.1 )

type III secretion protein HrcS

NC_017390
(Erwinia pyrifoliae DSM 12163)

2e-16

13) hrcS
( YP_002650075.1 )

Hrp/hrc secretion/translocation pathway protein HrcS

NC_012214
(Erwinia pyrifoliae Ep1/96)

2e-16

14) hrcS
( YP_005818254.1 )

hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation pathway-hrcS protein

NC_017445
(Erwinia sp. Ejp617)

2e-16

15) hrcS
( YP_003539969.1 )

type III secretion system protein

NC_013971
(Erwinia amylovora ATCC 49946)

3e-16

16) hrcS
( YP_003529885.1 )

type III secretion protein HrcS

NC_013961
(Erwinia amylovora CFBP1430)

3e-16

17) rscS
( YP_002870381.1 )

putative type III secretion membrane protein

NC_012660
(Pseudomonas fluorescens SBW25)

5e-16

18) hrcS
( YP_050173.1 )

type III secretion system protein

NC_004547
(Pectobacterium atrosepticum SCRI1043)

2e-15

19) PCC21_022920
( YP_006646948.1 )

type III secretion protein

NC_018525
(Pectobacterium carotovorum PCC21)

2e-15

20) PC1_2213
( YP_003017788.1 )

type III secretion protein, HrpO family

NC_012917
(Pectobacterium carotovorum PC1)

3e-15

21) Marme_1070
( YP_004312181.1 )

type III secretion protein, HrpO family

NC_015276
(Marinomonas mediterranea MMB-1)

5e-13

22) NH44784_014531
( YP_008028548.1 )

Type III secretion inner membrane protein (YscS,homologous to flagellar export components

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

5e-13

23) HCH_03262
( YP_434446.1 )

type III secretory pathway subunit EscS

NC_007645
(Hahella chejuensis KCTC 2396)

5e-13

24) bscS
( YP_006967887.1 )

type III secretion protein

NC_019382
(Bordetella bronchiseptica 253)

6e-13

25) bscS
( YP_006899834.1 )

type III secretion protein

NC_018829
(Bordetella bronchiseptica MO149)

6e-13

26) bscS
( NP_888178.1 )

type III secretion protein

NC_002927
(Bordetella bronchiseptica RB50)

6e-13

27) bscS
( NP_884487.1 )

type III secretion protein

NC_002928
(Bordetella parapertussis 12822)

6e-13

28) bscS
( YP_006895377.1 )

type III secretion protein

NC_018828
(Bordetella parapertussis Bpp5)

6e-13

29) bscS
( YP_006625538.1 )

type III secretion protein

NC_018518
(Bordetella pertussis 18323)

1e-12

30) bscS
( YP_005590273.1 )

putative type III secretion protein

NC_017223
(Bordetella pertussis CS)

1e-12

31) bscS
( NP_880883.1 )

type III secretion protein

NC_002929
(Bordetella pertussis Tohama I)

1e-12

32) DvMF_2414
( YP_002436823.1 )

type III secretion protein, HrpO family

NC_011769
(Desulfovibrio vulgaris Miyazaki F)

9e-12

33) sctS
( YP_003039884.1 )

type iii secretion component protein scts

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

2e-11

34) Dvul_3009
( YP_961208.1 )

HrpO family type III secretion protein

NC_008741
(Desulfovibrio vulgaris DP4)

2e-11

35) invX
( YP_009143.1 )

HrpO family type III secretion protein

NC_005863
(Desulfovibrio vulgaris Hildenborough)

2e-11

36) Deval_3199
( YP_005703978.1 )

type III secretion protein, HrpO family

NC_017311
(Desulfovibrio vulgaris RCH1)

2e-11

37) STAUR_3047
( YP_003952666.1 )

bacterial export protein fliq, family 3

NC_014623
(Stigmatella aurantiaca DW4/3-1)

4e-11

38) sctS
( YP_007365650.1 )

type III secretion system protein

NC_020127
(Lawsonia intracellularis N343)

4e-11

39) yscS
( YP_594924.1 )

translocation protein in type III secretion

NC_008011
(Lawsonia intracellularis PHE/MN1-00)

4e-11

40) ascS
( YP_001144303.1 )

AscS protein

NC_009350
(Aeromonas salmonicida A449)

7e-11

41) sctS
( NP_930978.1 )

Type III secretion component protein SctS

NC_005126
(Photorhabdus luminescens TTO1)

7e-11

42) MYSTI_02839
( YP_007359839.1 )

FliQ/MopD/SpaQ family protein

NC_020126
(Myxococcus stipitatus DSM 14675)

9e-11

43) LILAB_19930
( YP_004666966.1 )

FliQ/MopD/SpaQ family protein

NC_015711
(Myxococcus fulvus HW-1)

1e-10

44) fliQ
( YP_005371583.1 )

FliQ/MopD/SpaQ family protein

NC_017030
(Corallococcus coralloides DSM 2259)

3e-10

45) Desru_1251
( YP_004544811.1 )

flagellar biosynthetic protein FliQ

NC_015589
(Desulfotomaculum ruminis DSM 2154)

1e-09

46) fliQ
( YP_008112707.1 )

flagellar biosynthetic protein FliQ

NC_021505
(Pseudomonas putida NBRC 14164)

2e-09

47) hrcS
( YP_003774222.1 )

type III secretion HrcS protein

NC_014323
(Herbaspirillum seropedicae SmR1)

4e-09

48) Desca_1785
( YP_004497544.1 )

flagellar biosynthetic protein FliQ

NC_015565
(Desulfotomaculum carboxydivorans CO-1-SRB)

6e-09

49) Dred_2395
( YP_001113730.1 )

flagellar biosynthetic protein FliQ

NC_009253
(Desulfotomaculum reducens MI-1)

6e-09

50) SG2083
( YP_455763.1 )

type III secretion apparatus SpaQ

NC_007712
(Sodalis glossinidius morsitans)

8e-09

51) Dd586_1881
( YP_003333445.1 )

type III secretion protein, HrpO family

NC_013592
(Dickeya dadantii Ech586)

2e-08

52) Dd1591_1884
( YP_003004213.1 )

HrpO family type III secretion protein

NC_012912
(Dickeya zeae Ech1591)

2e-08

53) hrcS
( YP_003883247.1 )

type III secretion inner membrane protein

NC_014500
(Dickeya dadantii 3937)

2e-08

54) MXAN_2448
( YP_630668.1 )

FliQ/MopD/SpaQ family protein

NC_008095
(Myxococcus xanthus DK 1622)

2e-08

55) S70_09790
( YP_006216509.1 )

type III secretion apparatus protein

NC_017731
(Providencia stuartii MRSN 2154)

5e-08

56) ysaS
( YP_001007697.1 )

type III secretion apparatus protein

NC_008800
(Yersinia enterocolitica 8081)

5e-08

57) fliQ
( YP_006364961.1 )

flagellar biosynthetic protein fliQ

NC_017955
(Modestobacter marinus BC501)

8e-08

58) spaQ
( YP_002924279.1 )

type III needle complex export protein

NC_012751
(Candidatus Hamiltonella defensa T5A)

9e-08

59) H650_14840
( YP_008108768.1 )

hypothetical protein

NC_021500
(Enterobacter sp. R4-368)

2e-07

60) S58_72180
( YP_007516769.1 )

hypothetical protein

NC_020453
(Bradyrhizobium oligotrophicum S58)

3e-07

61) escS
( YP_003236102.1 )

T3SS structure protein EscS

NC_013364
(Escherichia coli 11128)

3e-07

62) escS
( YP_003501888.1 )

EscS

NC_013941
(Escherichia coli CB9615)

3e-07

63) escS
( YP_002331424.1 )

T3SS structure protein EscS

NC_011601
(Escherichia coli E2348/69)

3e-07

64) escS
( NP_290282.1 )

hypothetical protein

NC_002655
(Escherichia coli EDL933)

3e-07

65) ECO55CA74_21285
( YP_006161362.1 )

protein EscS

NC_017656
(Escherichia coli RM12579)

3e-07

66) ECs4582
( NP_312609.1 )

EscS

NC_002695
(Escherichia coli Sakai)

3e-07

67) escS
( YP_003080494.1 )

LEE-encoded type III secretion system factor

NC_013008
(Escherichia coli TW14359)

3e-07

68) CDCO157_4317
( YP_006315182.1 )

protein EscS

NC_017906
(Escherichia coli Xuzhou21)

3e-07

69) Sked_31050
( YP_003315836.1 )

flagellar biosynthetic protein FliQ

NC_013521
(Sanguibacter keddieii DSM 10542)

5e-07

70) fliQ
( YP_072722.1 )

flagellar biosynthesis protein

NC_006156
(Borrelia garinii PBi)

6e-07

71) yscS
( YP_004677244.1 )

Yop proteins translocation protein S

NC_015717
(Hyphomicrobium sp. MC1)

1e-06

72) escS
( YP_003232139.1 )

T3SS structure protein EscS

NC_013361
(Escherichia coli 11368)

1e-06

73) escS
( YP_003223489.1 )

T3SS structure protein EscS

NC_013353
(Escherichia coli 12009)

1e-06

74) Noca_0742
( YP_921954.1 )

export protein FliQ

NC_008699
(Nocardioides sp. JS614)

1e-06

75) fliQ
( YP_007372211.1 )

flagellar biosynthetic protein FliQ

NC_020134
(Clostridium stercorarium DSM 8532)

3e-06

76) fliQ
( YP_007678669.1 )

FliQ

NC_020887
(Clostridium stercorarium DSM 8532)

3e-06

77) GYMC10_4174
( YP_003244208.1 )

flagellar biosynthetic protein FliQ

NC_013406
(Paenibacillus sp. Y412MC10)

4e-06

78) BH0274
( YP_001883711.1 )

flagellar biosynthetic protein FliQ

NC_010673
(Borrelia hermsii DAH)

5e-06

79) fliQ
( YP_006202967.1 )

Flagellar biosynthesis protein

NC_017717
(Borrelia garinii BgVir)

6e-06

80) SG1306
( YP_454986.1 )

type III secretion apparatus

NC_007712
(Sodalis glossinidius morsitans)

9e-06

81) fliQ
( YP_006931444.1 )

flagellar biosynthesis protein

NC_018887
(Borrelia afzelii HLJ01)

1e-05

82) fliQ
( YP_005592492.1 )

flagellar biosynthetic protein FliQ

NC_017238
(Borrelia afzelii PKo)

1e-05

83) fliQ
( YP_004777523.1 )

flagellar biosynthetic protein FliQ

NC_015921
(Borrelia bissettii DN127)

1e-05

84) fliQ
( YP_005805381.1 )

flagellar biosynthetic protein FliQ

NC_017403
(Borrelia burgdorferi JD1)

1e-05

85) EUBELI_00827
( YP_002930282.1 )

hypothetical protein

NC_012778
(Eubacterium eligens ATCC 27750)

2e-05

86) MU9_27
( YP_007503446.1 )

Type III secretion inner membrane protein

NC_020418
(Morganella morganii KT)

2e-05

87) I871_01460
( YP_008415436.1 )

flagellar biosynthesis protein FliQ

NC_022079
(Borrelia miyamotoi LB-2001)

5e-05

88) yscS
( YP_005082208.1 )

Yop proteins translocation protein S

NC_016642
(Pseudovibrio sp. FO-BEG1)

6e-05

89) BT0274
( YP_945282.1 )

flagellar biosynthetic protein FliQ

NC_008710
(Borrelia turicatae 91E135)

1e-04

90) Q7M_279
( YP_006272210.1 )

Flagellar biosynthesis protein

NC_017808
(Borrelia crocidurae Achema)

2e-04

91) fliQ
( NP_212408.1 )

flagellar biosynthesis protein FliQ

NC_001318
(Borrelia burgdorferi B31)

4e-04

92) L144_01350
( YP_008407458.1 )

flagellar biosynthesis protein

NC_022048
(Borrelia burgdorferi CA382)

4e-04

93) fliQ
( YP_005806472.1 )

flagellar biosynthetic protein FliQ

NC_017418
(Borrelia burgdorferi N40)

4e-04

94) fliQ
( YP_002374797.1 )

flagellar biosynthetic protein FliQ

NC_011728
(Borrelia burgdorferi ZS7)

4e-04

95) fliQ
( YP_002221935.1 )

flagellar biosynthesis protein

NC_011229
(Borrelia duttonii Ly)

7e-04

96) fliQ
( YP_003870274.1 )

flagellar biosynthetic protein fliQ

NC_014483
(Paenibacillus polymyxa E681)

0.002

97) fliQ
( YP_005959544.1 )

flagellar biosynthetic protein fliQ

NC_017542
(Paenibacillus polymyxa M1)

0.002

98) PPSC2_c2105
( YP_003946318.1 )

flagellar biosynthetic protein fliq

NC_014622
(Paenibacillus polymyxa SC2)

0.002

99) Despr_2237
( YP_004195672.1 )

flagellar biosynthetic protein FliQ

NC_014972
(Desulfobulbus propionicus DSM 2032)

0.004

100) HPL003_18220
( YP_005076609.1 )

flagellar biosynthetic protein FliQ

NC_016641
(Paenibacillus terrae HPL-003)

0.005

101) fliQ
( YP_531401.1 )

flagellar biosynthesis protein FliQ

NC_007925
(Rhodopseudomonas palustris BisB18)

2.2

• Sequence Alignments

1) hrcS in NC_004578


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score =  142 bits (521),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 88/88 (100%), Positives = 88/88 (100%), Gaps = 0/88 (0%)

Query  1   MEALALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLA  60
           MEALALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLA
Sbjct  1   MEALALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLA  60

Query  61  MTGRWIGVELIQFINMAFDLIARSGVVH  88
           MTGRWIGVELIQFINMAFDLIARSGVVH
Sbjct  61  MTGRWIGVELIQFINMAFDLIARSGVVH  88

2) hrcS in NC_005773


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score =  114 bits (415),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 84/88 (96%), Positives = 87/88 (99%), Gaps = 0/88 (0%)

Query  1   MEALALFKQGMFLVVILTapplgvavlvgvlTSLLQALMQIQDQTLPFGIKLGAVGLTLA  60
           MEALALFKQGMFLVVILTAPPLGVAVLVGV+TSLLQALMQIQDQTLPFGIKL+AVG+TLA
Sbjct  1   MEALALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLA  60

Query  61  MTGRWIGVELIQFINMAFDLIARSGVNH  88
           MTGRWIGVELIQFINMAFDLIARSGV H
Sbjct  61  MTGRWIGVELIQFINMAFDLIARSGVVH  88

3) D781_3937 in NC_020064


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score =   99 bits (360),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 57/85 (68%), Positives = 76/85 (90%), Gaps = 0/85 (0%)

Query  1   MDILSFFRQAMLLVVLLSAPPLIVAVLVGVITSLLQAAMQLQDQTLPFCLKLVAVGVTLA  60
           M+ L++F+Q+M+LVV+L+APPL VAVLVGVITSLLQA MQ+QDQTLPF +KL AVG+TLA
Sbjct  1   MEALALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLA  60

Query  61  LTGRWLGVELLQLTQNAFAMMSRVG  85
           +TGRW+GVEL+Q+ + AF +++R G
Sbjct  61  MTGRWIGVELIQFINMAFDLIARSG  85

4) Ser39006_2920 in NC_022268


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 98.3 bits (354),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 55/86 (64%), Positives = 72/86 (84%), Gaps = 0/86 (0%)

Query  1   METLNLFKQAMVLVVMLSAPPLLAAVMVGVLVSLIQAVMQLQDQTLPFAVKLVSVGLVLA  60
           ME+L LFKQ+M LVV+L+APPL  AV+VGV+ SL+QA+MQ+QDQTLPF++KL +VG+ LA
Sbjct  1   MEALALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLA  60

Query  61  MTGRWIGSELIQLAVTAFSMIEHTHV  86
           MTGRWIG ELIQ+   AF +I ++ V
Sbjct  61  MTGRWIGVELIQFINMAFDLIARSGV  86

5) HrcS in NC_007005


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 97.8 bits (352),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 82/88 (94%), Positives = 87/88 (99%), Gaps = 0/88 (0%)

Query  1   MEALALFKQGMFlvviltapplavavlvgvvtsllQALMQIQDQTLPFGIKLGAVGLTLA  60
           MEALALFKQGMFLVVILTAPPL+VAVLVGV+TSLLQALMQIQDQTLPFGIKL+AVG+TLA
Sbjct  1   MEALALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLA  60

Query  61  MTGRWIGVELIEFINMAFDLIARSGVSH  88
           MTGRWIGVELI+FINMAFDLIARSGV H
Sbjct  61  MTGRWIGVELIQFINMAFDLIARSGVVH  88

6) H045_00195 in NC_020209


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 95.7 bits (344),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 67/86 (78%), Positives = 81/86 (95%), Gaps = 0/86 (0%)

Query  1   MEPIVLFKQGMLLVVVLTAPPlivavvvgvltslvQALMQIQDQTLPFGIKLVAVGITLI  60
           ME++ LFKQGM+LVV+LTAPPL VAV+VGV+TSL+QALMQIQDQTLPFGIKL AVG+TL 
Sbjct  1   MEALALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLA  60

Query  61  LTGRWIGVELIQLINLMFDMIARSAL  86
           +TGRWIGVELIQ+IN+ FD+IARS++
Sbjct  61  MTGRWIGVELIQFINMAFDLIARSGV  86

7) rscS in NC_017911


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 95.7 bits (344),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 64/85 (76%), Positives = 81/85 (96%), Gaps = 0/85 (0%)

Query  1   MEPIVLFKQGMLLVVVLSAPPlivavvvgvltslvQALMQIQDQTLPFGIKLVAVGVTLI  60
           ME++ LFKQGM+LVV+L+APPL VAV+VGV+TSL+QALMQIQDQTLPFGIKL AVG+TL 
Sbjct  1   MEALALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLA  60

Query  61  LTGRWIGVELIQLINLTFEMIGRSA  85
           +TGRWIGVELIQ+IN++F++I+RS+
Sbjct  61  MTGRWIGVELIQFINMAFDLIARSG  85

8) Pmen_0047 in NC_009439


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 90.5 bits (324),  Expect = 7e-20, Method: Compositional matrix adjust.
 Identities = 77/85 (91%), Positives = 83/85 (98%), Gaps = 0/85 (0%)

Query  1   MEALALFKQGMFlvviltapplavavlvgvttslvQALMQMQDQTLPFGLKLAAVGLTLA  60
           MEALALFKQGMFLVVILTAPPL+VAVLVGV TSL+QALMQ+QDQTLPFG+KLAAVG+TLA
Sbjct  1   MEALALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLA  60

Query  61  MTGRWIGLELIQFTNMAFDLIARSG  85
           MTGRWIG+ELIQF NMAFDLIARSG
Sbjct  61  MTGRWIGVELIQFINMAFDLIARSG  85

9) PSEBR_a5381 in NC_015379


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 88.6 bits (317),  Expect = 3e-19, Method: Compositional matrix adjust.
 Identities = 59/84 (71%), Positives = 77/84 (92%), Gaps = 0/84 (0%)

Query  1   MDALTLFKEGMLLVVLLSAPPLIVAVIVGVLTSLVQALMQIQDQTLPFGIKlvavgltll  60
           M+AL+LFK+GM+LVV+L+APPL VAV+VGV+TSL+QALMQIQDQTLPFGIKL AVG+TL 
Sbjct  1   MEALALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLA  60

Query  61  vtgRWIGVELLGLLRRAFEMMANT  84
           +TGRWIGVEL+ ++  AF+++A +
Sbjct  61  MTGRWIGVELIQFINMAFDLIARS  84

10) hrcS in NC_016830


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 88.6 bits (317),  Expect = 3e-19, Method: Compositional matrix adjust.
 Identities = 59/84 (71%), Positives = 77/84 (92%), Gaps = 0/84 (0%)

Query  1   MDALTLFKEGMLLVVLLSAPPLIVAVIVGVLTSLVQALMQIQDQTLPFGIKlvavgltll  60
           M+AL+LFK+GM+LVV+L+APPL VAV+VGV+TSL+QALMQIQDQTLPFGIKL AVG+TL 
Sbjct  1   MEALALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLA  60

Query  61  vtgRWIGVELLGLLRRAFEMMANT  84
           +TGRWIGVEL+ ++  AF+++A +
Sbjct  61  MTGRWIGVELIQFINMAFDLIARS  84

11) hrcS in NC_010694


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 79.4 bits (282),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 55/84 (66%), Positives = 76/84 (91%), Gaps = 0/84 (0%)

Query  1   MDILNLFKQAMllvvllsappllvavIVGVLVSLLQAVMQLQDQTLPFAIKLVAVGVALA  60
           M+ L LFKQ+M+LVV+L+APPL VAV+VGV+ SLLQA+MQ+QDQTLPF+IKL AVG++LA
Sbjct  1   MEALALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLA  60

Query  61  LSGRWIGVELIELAQQAFTMIPQT  84
           ++GRWIGVELI++ + AF +I+++
Sbjct  61  MTGRWIGVELIQFINMAFDLIARS  84

12) hrcS in NC_017445


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 79.2 bits (281),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 54/84 (65%), Positives = 76/84 (91%), Gaps = 0/84 (0%)

Query  1   MDILNLFKQAMllvvllsappllvavIIGVLVSLLQAVMQLQDQTLPFAIKLVAVGIALA  60
           M+ L LFKQ+M+LVV+L+APPL VAV++GV+ SLLQA+MQ+QDQTLPF+IKL AVG++LA
Sbjct  1   MEALALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLA  60

Query  61  LSGRWIGVELIELAQQAFTMIPQT  84
           ++GRWIGVELI++ + AF +I+++
Sbjct  61  MTGRWIGVELIQFINMAFDLIARS  84

13) hrcS in NC_017390


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 79.2 bits (281),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 54/84 (65%), Positives = 76/84 (91%), Gaps = 0/84 (0%)

Query  1   MDILNLFKQAMllvvllsappllvavIIGVLVSLLQAVMQLQDQTLPFAIKLVAVGIALA  60
           M+ L LFKQ+M+LVV+L+APPL VAV++GV+ SLLQA+MQ+QDQTLPF+IKL AVG++LA
Sbjct  1   MEALALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLA  60

Query  61  LSGRWIGVELIELAQQAFTMIPQT  84
           ++GRWIGVELI++ + AF +I+++
Sbjct  61  MTGRWIGVELIQFINMAFDLIARS  84

14) hrcS in NC_012214


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 79.2 bits (281),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 54/84 (65%), Positives = 76/84 (91%), Gaps = 0/84 (0%)

Query  1   MDILNLFKQAMllvvllsappllvavIIGVLVSLLQAVMQLQDQTLPFAIKLVAVGIALA  60
           M+ L LFKQ+M+LVV+L+APPL VAV++GV+ SLLQA+MQ+QDQTLPF+IKL AVG++LA
Sbjct  1   MEALALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLA  60

Query  61  LSGRWIGVELIELAQQAFTMIPQT  84
           ++GRWIGVELI++ + AF +I+++
Sbjct  61  MTGRWIGVELIQFINMAFDLIARS  84

15) hrcS in NC_013971


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 78.4 bits (278),  Expect = 3e-16, Method: Compositional matrix adjust.
 Identities = 54/84 (65%), Positives = 76/84 (91%), Gaps = 0/84 (0%)

Query  1   MDILNLFKQAMllvvllsappllvavIVGVLVSLLQAVMQLQDQTLPFAIKLVAVGIALA  60
           M+ L LFKQ+M+LVV+L+APPL VAV+VGV+ SLLQA+MQ+QDQTLPF+IKL AVG++LA
Sbjct  1   MEALALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLA  60

Query  61  LSGRWIGVELLELAQQAFTMIPQT  84
           ++GRWIGVEL+++ + AF +I+++
Sbjct  61  MTGRWIGVELIQFINMAFDLIARS  84

16) hrcS in NC_013961


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 78.4 bits (278),  Expect = 3e-16, Method: Compositional matrix adjust.
 Identities = 54/84 (65%), Positives = 76/84 (91%), Gaps = 0/84 (0%)

Query  1   MDILNLFKQAMllvvllsappllvavIVGVLVSLLQAVMQLQDQTLPFAIKLVAVGIALA  60
           M+ L LFKQ+M+LVV+L+APPL VAV+VGV+ SLLQA+MQ+QDQTLPF+IKL AVG++LA
Sbjct  1   MEALALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLA  60

Query  61  LSGRWIGVELLELAQQAFTMIPQT  84
           ++GRWIGVEL+++ + AF +I+++
Sbjct  61  MTGRWIGVELIQFINMAFDLIARS  84

17) rscS in NC_012660


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 77.9 bits (276),  Expect = 5e-16, Method: Compositional matrix adjust.
 Identities = 65/85 (77%), Positives = 81/85 (96%), Gaps = 0/85 (0%)

Query  1   MEPIVLFKQGmllvvvlsappllvavvvgvmtslvQALMQVQDQTLPFGIKLVAVGITLI  60
           ME++ LFKQGM+LVV+L+APPL VAV+VGV+TSL+QALMQ+QDQTLPFGIKL AVG+TL 
Sbjct  1   MEALALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLA  60

Query  61  MTGRWIGVELIQLINLTFDMIGRSA  85
           MTGRWIGVELIQ+IN++FD+I+RS+
Sbjct  61  MTGRWIGVELIQFINMAFDLIARSG  85

18) hrcS in NC_004547


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 76.0 bits (269),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 55/86 (64%), Positives = 77/86 (90%), Gaps = 0/86 (0%)

Query  1   MEIITLFRQAmvmvvllsappllvavivGVLISLLQAVMQLQDQTLPFAVKLISVGLTLA  60
           ME ++LF+Q+M +VV+L+APPL VAV+VGV+ SLLQA+MQ+QDQTLPF++KL +VG+TLA
Sbjct  1   MEALALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLA  60

Query  61  LCGRWIGVELMQLAITAFNMIAHTGV  86
           + GRWIGVEL+Q+   AF++IA++GV
Sbjct  61  MTGRWIGVELIQFINMAFDLIARSGV  86

19) PCC21_022920 in NC_018525


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 75.5 bits (267),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 54/86 (63%), Positives = 77/86 (90%), Gaps = 0/86 (0%)

Query  1   MEIITLFRQAmvmvvllsappllvavivGVLISLLQAVMQLQDQTLPFAVKLISVGLALA  60
           ME ++LF+Q+M +VV+L+APPL VAV+VGV+ SLLQA+MQ+QDQTLPF++KL +VG++LA
Sbjct  1   MEALALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLA  60

Query  61  LCGRWIGVELMQLAITAFNMIAHTGV  86
           + GRWIGVEL+Q+   AF++IA++GV
Sbjct  61  MTGRWIGVELIQFINMAFDLIARSGV  86

20) PC1_2213 in NC_012917


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 75.2 bits (266),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 54/86 (63%), Positives = 77/86 (90%), Gaps = 0/86 (0%)

Query  1   MEIITLFRQAmvmvvllsappllvavivGVLISLLQAVMQLQDQTLPFAVKLISVGLALA  60
           ME ++LF+Q+M +VV+L+APPL VAV+VGV+ SLLQA+MQ+QDQTLPF++KL +VG++LA
Sbjct  1   MEALALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLA  60

Query  61  LCGRWIGVELMQLAITAFNMIAQTGV  86
           + GRWIGVEL+Q+   AF++IA++GV
Sbjct  61  MTGRWIGVELIQFINMAFDLIARSGV  86

21) Marme_1070 in NC_015276


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 67.9 bits (238),  Expect = 5e-13, Method: Compositional matrix adjust.
 Identities = 59/85 (70%), Positives = 73/85 (86%), Gaps = 0/85 (0%)

Query  1   MDTLTLFKQGMVLVVMLSAPPLvvavivgvvvsllqallqvqdqtlPFTIKLVAVVVTLA  60
           M++L+LFKQGM LVV+L+APPL VAV+VGV+ SLLQAL+Q+QDQTLPF IKL AV +TLA
Sbjct  1   MEALALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLA  60

Query  61  ITGRWLGVEIIQFTTQMFNLIATVG  85
           +TGRW+GVE+IQF    F+LIA  G
Sbjct  61  MTGRWIGVELIQFINMAFDLIARSG  85

22) NH44784_014531 in NC_021285


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 67.9 bits (238),  Expect = 5e-13, Method: Compositional matrix adjust.
 Identities = 36/76 (48%), Positives = 58/76 (77%), Gaps = 0/76 (0%)

Query  11  TQALYLVLWLSLPPIAVAAIVGTLFSLFQALTQIQEQTLSFAVKLIAVFATIMLTARWLS  70
            Q+++LV+ L+ PP++VA +VG + SL+QAL QIQ+QTL+F++KL AV  T+ +T+RW++
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  71  AELYNFTISVFDLFYK  86
            EL +F    FDL+ +
Sbjct  68  VELIQFINMAFDLIAR  83

23) HCH_03262 in NC_007645


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 67.9 bits (238),  Expect = 5e-13, Method: Compositional matrix adjust.
 Identities = 36/75 (48%), Positives = 58/75 (78%), Gaps = 0/75 (0%)

Query  11  TEALLLVLILSMPPILVATFTGVLVSLLQAVTQIQEQTLGFAVKLVAIVATLYLTARWLG  70
            ++++LV+IL+ PP+ VA + GV+ SLLQA+ QIQ+QTL F++KL A+  TL +T+RW+G
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  71  MEMYQYTVLVFDAIP  85
           +E+ Q+  + FD I+
Sbjct  68  VELIQFINMAFDLIA  82

24) bscS in NC_019382


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 67.6 bits (237),  Expect = 6e-13, Method: Compositional matrix adjust.
 Identities = 36/76 (48%), Positives = 57/76 (75%), Gaps = 0/76 (0%)

Query  14  TQALYLVLWLSLPPIAVAAIVGTLFSLLQALTQVQEQTLSFAVKLIAVFATLMLAARWIS  73
            Q+++LV+ L+ PP++VA +VG + SLLQAL Q+Q+QTL+F++KL AV  TL +++RWI+
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  74  AEIYNFTIAVFDAFHR  89
            E+ +F    FD + R
Sbjct  68  VELIQFINMAFDLIAR  83

25) bscS in NC_018829


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 67.6 bits (237),  Expect = 6e-13, Method: Compositional matrix adjust.
 Identities = 36/76 (48%), Positives = 57/76 (75%), Gaps = 0/76 (0%)

Query  14  TQALYLVLWLSLPPIAVAAIVGTLFSLLQALTQVQEQTLSFAVKLIAVFATLMLAARWIS  73
            Q+++LV+ L+ PP++VA +VG + SLLQAL Q+Q+QTL+F++KL AV  TL +++RWI+
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  74  AEIYNFTIAVFDAFHR  89
            E+ +F    FD + R
Sbjct  68  VELIQFINMAFDLIAR  83

26) bscS in NC_002927


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 67.6 bits (237),  Expect = 6e-13, Method: Compositional matrix adjust.
 Identities = 36/76 (48%), Positives = 57/76 (75%), Gaps = 0/76 (0%)

Query  14  TQALYLVLWLSLPPIAVAAIVGTLFSLLQALTQVQEQTLSFAVKLIAVFATLMLAARWIS  73
            Q+++LV+ L+ PP++VA +VG + SLLQAL Q+Q+QTL+F++KL AV  TL +++RWI+
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  74  AEIYNFTIAVFDAFHR  89
            E+ +F    FD + R
Sbjct  68  VELIQFINMAFDLIAR  83

27) bscS in NC_002928


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 67.6 bits (237),  Expect = 6e-13, Method: Compositional matrix adjust.
 Identities = 36/76 (48%), Positives = 57/76 (75%), Gaps = 0/76 (0%)

Query  14  TQALYLVLWLSLPPIAVAAIVGTLFSLLQALTQVQEQTLSFAVKLIAVFATLMLAARWIS  73
            Q+++LV+ L+ PP++VA +VG + SLLQAL Q+Q+QTL+F++KL AV  TL +++RWI+
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  74  AEIYNFTIAVFDAFHR  89
            E+ +F    FD + R
Sbjct  68  VELIQFINMAFDLIAR  83

28) bscS in NC_018828


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 67.6 bits (237),  Expect = 6e-13, Method: Compositional matrix adjust.
 Identities = 36/76 (48%), Positives = 57/76 (75%), Gaps = 0/76 (0%)

Query  14  TQALYLVLWLSLPPIAVAAIVGTLFSLLQALTQVQEQTLSFAVKLIAVFATLMLAARWIS  73
            Q+++LV+ L+ PP++VA +VG + SLLQAL Q+Q+QTL+F++KL AV  TL +++RWI+
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  74  AEIYNFTIAVFDAFHR  89
            E+ +F    FD + R
Sbjct  68  VELIQFINMAFDLIAR  83

29) bscS in NC_018518


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 66.6 bits (233),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 35/76 (47%), Positives = 56/76 (74%), Gaps = 0/76 (0%)

Query  11  TQALYLVLWLSLPPIAVVAIVGTLFSLLQALTQVQEQTLSFAVKLIAVFATLMLAARWIS  70
            Q+++LV+ L+ PP++V  +VG + SLLQAL Q+Q+QTL+F++KL AV  TL +++RWI+
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  71  AEIYNFTIAVFDAFHR  86
            E+ +F    FD + R
Sbjct  68  VELIQFINMAFDLIAR  83

30) bscS in NC_017223


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 66.6 bits (233),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 35/76 (47%), Positives = 56/76 (74%), Gaps = 0/76 (0%)

Query  11  TQALYLVLWLSLPPIAVVAIVGTLFSLLQALTQVQEQTLSFAVKLIAVFATLMLAARWIS  70
            Q+++LV+ L+ PP++V  +VG + SLLQAL Q+Q+QTL+F++KL AV  TL +++RWI+
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  71  AEIYNFTIAVFDAFHR  86
            E+ +F    FD + R
Sbjct  68  VELIQFINMAFDLIAR  83

31) bscS in NC_002929


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 66.6 bits (233),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 35/76 (47%), Positives = 56/76 (74%), Gaps = 0/76 (0%)

Query  11  TQALYLVLWLSLPPIAVVAIVGTLFSLLQALTQVQEQTLSFAVKLIAVFATLMLAARWIS  70
            Q+++LV+ L+ PP++V  +VG + SLLQAL Q+Q+QTL+F++KL AV  TL +++RWI+
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  71  AEIYNFTIAVFDAFHR  86
            E+ +F    FD + R
Sbjct  68  VELIQFINMAFDLIAR  83

32) DvMF_2414 in NC_011769


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 63.7 bits (222),  Expect = 9e-12, Method: Compositional matrix adjust.
 Identities = 32/70 (46%), Positives = 55/70 (79%), Gaps = 0/70 (0%)

Query  11  KALYLVLMLSMPPIVVASVIGILISLVQAITQLQEQTLTFGVKLIAVVLTLFLMGGWFGA  70
           ++++LV++L+ PP+ VA ++G++ SL+QA+ Q+Q+QTL FG+KL AV +TL + G W+G 
Sbjct  9   QGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGV  68

Query  71  ELLRFADEIF  80
           EL++F +  F
Sbjct  69  ELIQFINMAF  78

33) sctS in NC_012962


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 62.4 bits (217),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 40/78 (52%), Positives = 55/78 (71%), Gaps = 0/78 (0%)

Query  5   DILHFTSQSLWLVLILSLPPVLMAAVVGTLVSLIQALTQIQEQTLGFVIKLIAVIITLFA  64
           + L +  Q++ LV+IL+ PP+ +A +VG + SL+QAL QIQ+QTL F IKL AV +TL  
Sbjct  2   EALALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAM  61

Query  65  TATWLGNELYSFANMAFS  82
           T+ W+G EL  F NMAF 
Sbjct  62  TGRWIGVELIQFINMAFD  79

34) Dvul_3009 in NC_008741


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 62.4 bits (217),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 33/70 (48%), Positives = 55/70 (79%), Gaps = 0/70 (0%)

Query  11  KALYLVLMLSMPPIIVASVVGIVLSLIQAITQLQEQTLTFGVKLIAVVLTLFLMGGWFGG  70
           ++++LV++L+ PP+ VA +VG++ SL+QA+ Q+Q+QTL FG+KL AV +TL + G W+G 
Sbjct  9   QGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGV  68

Query  71  ELLRFADEIF  80
           EL++F +  F
Sbjct  69  ELIQFINMAF  78

35) invX in NC_005863


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 62.4 bits (217),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 33/70 (48%), Positives = 55/70 (79%), Gaps = 0/70 (0%)

Query  11  KALYLVLMLSMPPIIVASVVGIVLSLIQAITQLQEQTLTFGVKLIAVVLTLFLMGGWFGG  70
           ++++LV++L+ PP+ VA +VG++ SL+QA+ Q+Q+QTL FG+KL AV +TL + G W+G 
Sbjct  9   QGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGV  68

Query  71  ELLRFADEIF  80
           EL++F +  F
Sbjct  69  ELIQFINMAF  78

36) Deval_3199 in NC_017311


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 62.4 bits (217),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 33/70 (48%), Positives = 55/70 (79%), Gaps = 0/70 (0%)

Query  11  KALYLVLMLSMPPIIVASVVGIVLSLIQAITQLQEQTLTFGVKLIAVVLTLFLMGGWFGG  70
           ++++LV++L+ PP+ VA +VG++ SL+QA+ Q+Q+QTL FG+KL AV +TL + G W+G 
Sbjct  9   QGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGV  68

Query  71  ELLRFADEIF  80
           EL++F +  F
Sbjct  69  ELIQFINMAF  78

37) STAUR_3047 in NC_014623


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 61.6 bits (214),  Expect = 4e-11, Method: Compositional matrix adjust.
 Identities = 34/72 (48%), Positives = 55/72 (77%), Gaps = 0/72 (0%)

Query  9   QQALFLVLIVSAPPVLISLVVGFIIALFQATTQIQEQTLTFAPKVVIVFIVLAMAGPWIG  68
           +Q++FLV+I++APP+ ++++VG I +L+QA  QIQ+QTL F+ K+  V + LAM+G WIG
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  69  HQLLRFTFHVFD  80
            +L++F    FD
Sbjct  68  VELIQFINMAFD  79

38) sctS in NC_020127


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 61.3 bits (213),  Expect = 4e-11, Method: Compositional matrix adjust.
 Identities = 33/71 (47%), Positives = 54/71 (77%), Gaps = 0/71 (0%)

Query  6   KALYLVLVLSMPPILVASLVGLFVSLIQAITQLQEQTLAFGIKLLAVVLTLFFMGGWLTG  65
           ++++LV++L+ PP+ VA LVG++ SL+QA+ Q+Q+QTL+FGIKL AV +TL   G W+  
Sbjct  9   QGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGV  68

Query  66  ELYRYAEEIFN  76
           EL ++ +  F+
Sbjct  69  ELIQFINMAFD  79

39) yscS in NC_008011


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 61.3 bits (213),  Expect = 4e-11, Method: Compositional matrix adjust.
 Identities = 33/71 (47%), Positives = 54/71 (77%), Gaps = 0/71 (0%)

Query  11  KALYLVLVLSMPPILVASLVGLFVSLIQAITQLQEQTLAFGIKLLAVVLTLFFMGGWLTG  70
           ++++LV++L+ PP+ VA LVG++ SL+QA+ Q+Q+QTL+FGIKL AV +TL   G W+  
Sbjct  9   QGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGV  68

Query  71  ELYRYAEEIFN  81
           EL ++ +  F+
Sbjct  69  ELIQFINMAFD  79

40) ascS in NC_009350


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 60.5 bits (210),  Expect = 7e-11, Method: Compositional matrix adjust.
 Identities = 40/75 (54%), Positives = 51/75 (68%), Gaps = 0/75 (0%)

Query  5   DILHFTSQALWLVLILSMPPVLVAALVGTLVSLLQALTQIQEQTLGFVAKLIAVVITLFA  64
           + L +  Q++ LV+IL+ PP+ VA LVG + SLLQAL QIQ+QTL F  KL AV +TL  
Sbjct  2   EALALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAM  61

Query  65  TTAWLGNELYSFANM  79
           T  W+G EL  F NM
Sbjct  62  TGRWIGVELIQFINM  76

41) sctS in NC_005126


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 60.5 bits (210),  Expect = 7e-11, Method: Compositional matrix adjust.
 Identities = 39/77 (51%), Positives = 54/77 (71%), Gaps = 0/77 (0%)

Query  5   DILHFTSQSLWLVLILSLPPVLMAAAVGTLVSLIQALTQIQEQTLGFVIKLIAVIITLFA  64
           + L +  Q++ LV+IL+ PP+ +A  VG + SL+QAL QIQ+QTL F IKL AV +TL  
Sbjct  2   EALALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAM  61

Query  65  TATWLGNELYSFANMTF  81
           T+ W+G EL  F NM+F
Sbjct  62  TGRWIGVELIQFINMAF  78

42) MYSTI_02839 in NC_020126


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 60.3 bits (209),  Expect = 9e-11, Method: Compositional matrix adjust.
 Identities = 35/72 (49%), Positives = 54/72 (75%), Gaps = 0/72 (0%)

Query  9   QEALFLVLVVSAPPVLMSLLVGFIISLFQATTQIQEQTLTFAPKVIIVFGVLAMTGPWIG  68
           ++++FLV++++APP+ +++LVG I SL+QA  QIQ+QTL F+ K+  V   LAMTG WIG
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  69  SQLMRFTFHVFD  80
            +L++F    FD
Sbjct  68  VELIQFINMAFD  79

43) VPBB_1533 in NC_019955


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 60.0 bits (208),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 37/76 (49%), Positives = 57/76 (75%), Gaps = 0/76 (0%)

Query  11  TQALTLVLFLSLPPILVAALVGTLVSLIQALTQVQEQTLGFVVKLIAVIITLFITTQWLG  70
            Q++ LV++L+ PP+ VA LVG + SL+QAL Q+Q+QTL F +KL AV +TL +T +W+G
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  71  AELHAFASLALDKIPQ  86
            EL  F ++A+D I++
Sbjct  68  VELIQFINMAFDLIAR  83

44) M636_13700 in NC_021848


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 60.0 bits (208),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 37/76 (49%), Positives = 57/76 (75%), Gaps = 0/76 (0%)

Query  11  TQALTLVLFLSLPPILVAALVGTLVSLIQALTQVQEQTLGFVVKLIAVIITLFITTQWLG  70
            Q++ LV++L+ PP+ VA LVG + SL+QAL Q+Q+QTL F +KL AV +TL +T +W+G
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  71  AELHAFASLALDKIPQ  86
            EL  F ++A+D I++
Sbjct  68  VELIQFINMAFDLIAR  83

45) M634_09100 in NC_021847


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 60.0 bits (208),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 37/76 (49%), Positives = 57/76 (75%), Gaps = 0/76 (0%)

Query  11  TQALTLVLFLSLPPILVAALVGTLVSLIQALTQVQEQTLGFVVKLIAVIITLFITTQWLG  70
            Q++ LV++L+ PP+ VA LVG + SL+QAL Q+Q+QTL F +KL AV +TL +T +W+G
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  71  AELHAFASLALDKIPQ  86
            EL  F ++A+D I++
Sbjct  68  VELIQFINMAFDLIAR  83

46) VP1673 in NC_004603


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 60.0 bits (208),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 37/76 (49%), Positives = 57/76 (75%), Gaps = 0/76 (0%)

Query  11  TQALTLVLFLSLPPILVAALVGTLVSLIQALTQVQEQTLGFVVKLIAVIITLFITTQWLG  70
            Q++ LV++L+ PP+ VA LVG + SL+QAL Q+Q+QTL F +KL AV +TL +T +W+G
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  71  AELHAFASLALDKIPQ  86
            EL  F ++A+D I++
Sbjct  68  VELIQFINMAFDLIAR  83

47) LILAB_19930 in NC_015711


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 59.7 bits (207),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 34/72 (48%), Positives = 54/72 (75%), Gaps = 0/72 (0%)

Query  9   QEALFLVLVASAPPVLMSLLVGFIISLFQATTQIQEQTLTFAPKVVAVFGILALAGPWIG  68
           ++++FLV++ +APP+ +++LVG I SL+QA  QIQ+QTL F+ K+ AV   LA++G WIG
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  69  SQLVRFTFHVFD  80
            +L++F    FD
Sbjct  68  VELIQFINMAFD  79

48) N646_0741 in NC_022349


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 58.9 bits (204),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 37/76 (49%), Positives = 55/76 (73%), Gaps = 0/76 (0%)

Query  11  TQALTLVLYLSLPPILVAALVGTLVSLIQALTQVQEQTLGFVVKLIAVIITLFVTTQWLG  70
            Q++ LV+ L+ PP+ VA LVG + SL+QAL Q+Q+QTL F +KL AV +TL +T +W+G
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  71  AELHAFASLAMDKIPQ  86
            EL  F ++A D I++
Sbjct  68  VELIQFINMAFDLIAR  83

49) VEA_003361 in NC_013456


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 58.9 bits (204),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 37/76 (49%), Positives = 55/76 (73%), Gaps = 0/76 (0%)

Query  11  TQALTLVLYLSLPPILVAALVGTLVSLIQALTQVQEQTLGFVVKLIAVIITLFVTTQWLG  70
            Q++ LV+ L+ PP+ VA LVG + SL+QAL Q+Q+QTL F +KL AV +TL +T +W+G
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  71  AELHAFASLAMDKIPQ  86
            EL  F ++A D I++
Sbjct  68  VELIQFINMAFDLIAR  83

50) fliQ in NC_017030


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 58.4 bits (202),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 34/72 (48%), Positives = 54/72 (75%), Gaps = 0/72 (0%)

Query  9   QEALFLVLVVSAPPVLMSLLVGFLISLFQATTQIQEQTLTFAPKVVLVFGVLAMTGPWIG  68
           ++++FLV++++APP+ +++LVG + SL+QA  QIQ+QTL F+ K+  V   LAMTG WIG
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  69  GQLLRFTFHVFD  80
            +L++F    FD
Sbjct  68  VELIQFINMAFD  79

51) M892_04540 in NC_022269


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 57.6 bits (199),  Expect = 6e-10, Method: Compositional matrix adjust.
 Identities = 35/76 (47%), Positives = 56/76 (74%), Gaps = 0/76 (0%)

Query  11  TQALTLVLFLSLPPILVAALVGTLVSLVQALTQVQEQTLGFVVKLIAVIITLFVTTQWLG  70
            Q++ LV++L+ PP+ VA LVG + SL+QAL Q+Q+QTL F +KL AV +TL +T +W+G
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  71  AELHSFATLTLGKIPQ  86
            EL  F  ++++ I++
Sbjct  68  VELIQFINMAFDLIAR  83

52) VIBHAR_01725 in NC_009783


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 57.6 bits (199),  Expect = 6e-10, Method: Compositional matrix adjust.
 Identities = 35/76 (47%), Positives = 56/76 (74%), Gaps = 0/76 (0%)

Query  11  TQALTLVLFLSLPPILVAALVGTLVSLVQALTQVQEQTLGFVVKLIAVIITLFVTTQWLG  70
            Q++ LV++L+ PP+ VA LVG + SL+QAL Q+Q+QTL F +KL AV +TL +T +W+G
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  71  AELHSFATLTLGKIPQ  86
            EL  F  ++++ I++
Sbjct  68  VELIQFINMAFDLIAR  83

53) Desru_1251 in NC_015589


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 56.8 bits (196),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 35/80 (44%), Positives = 56/80 (70%), Gaps = 0/80 (0%)

Query  7   LHLAREALMLVVILSLPALGVAMLVGLIISILQATTQIQEQTLTFVPKMVAVFVTLIIAA  66
           L L ++++ LVVIL+ P+LGVA+LVG+I S+LQA  QIQ+QTL F  K+ AV +TL +++
Sbjct  4   LALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTG  63

Query  67  SWLLNIAVNFTTRLYEQIPN  86
            W+    ++F    ++ I+ 
Sbjct  64  RWIGVELIQFINMAFDLIAR  83

54) Bphyt_5211 in NC_010676


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 56.6 bits (195),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 28/66 (43%), Positives = 48/66 (73%), Gaps = 0/66 (0%)

Query  21  LSLPALAVATAIGVVVGLLQSVTQIQDQALPYGAKIIGVGLVMIVAIPWGNSEVSRFLDH  80
           L+ P+L+VA  +GV+ +LLQ++ QIQDQ+LP+G K+ +VG+ + ++  W   E+ +F++ 
Sbjct  17  LTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGVELIQFINM  76

Query  81  AFSYIA  86
           AF  IA
Sbjct  77  AFDLIA  82

55) fliQ in NC_021505


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 55.8 bits (192),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 30/66 (46%), Positives = 50/66 (76%), Gaps = 0/66 (0%)

Query  9   NQTLYLILILVAWPIIVATLVGLLIGLFQTVTQLQEQTLPFGFKLLAVSICLFLLSGWYG  68
           +Q ++L++IL A P+ VA LVG++ +L+Q++ Q+Q+QTLPFG+KL AV++ L + + W G
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  69  ETLLGF  74
             L+ F
Sbjct  68  VELIQF  73

56) hrcS in NC_014323


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 54.7 bits (188),  Expect = 4e-09, Method: Compositional matrix adjust.
 Identities = 38/84 (46%), Positives = 67/84 (80%), Gaps = 0/84 (0%)

Query  3   DTINFFQQSLWMAIMMSAPPLLIATLCGLGVSLIQAVTQIQDQTlpyvvklvavavtlaS  62
           +++ +F+Q++ + ++++APPL +A L G+  SL+QA+ QIQDQTLP+ +KL AV++TLA 
Sbjct  2   EALALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAM  61

Query  63  MGRWIGVEMLRLADLAFTMVPDIG  86
            GRWIGVE++++ ++AF +++  G
Sbjct  62  TGRWIGVELIQFINMAFDLIARSG  85

57) Desca_1785 in NC_015565


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 54.2 bits (186),  Expect = 6e-09, Method: Compositional matrix adjust.
 Identities = 32/76 (43%), Positives = 55/76 (73%), Gaps = 0/76 (0%)

Query  11  REALMMVVILSLPALGVAMLVGLIISILQATTQIQEQTLSFVPKMVAVFVTLLIAASWLL  70
           ++++ +VVIL+ P+LGVA+LVG+I S+LQA  QIQ+QTL+F  K+ AV +TL +++ W+ 
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  71  NIAVNFTTRLYQQIPN  86
              ++F    ++ I+ 
Sbjct  68  VELIQFINMAFDLIAR  83

58) Dred_2395 in NC_009253


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 54.2 bits (186),  Expect = 6e-09, Method: Compositional matrix adjust.
 Identities = 33/80 (42%), Positives = 56/80 (70%), Gaps = 0/80 (0%)

Query  7   LHLAREALMMVVILSIPTLGVAMLVGLIIGIFQATTQIQEQTLSFVPKMVAVFLTLIVAA  66
           L L ++++ +VVIL+ P LGVA+LVG+I +++QA  QIQ+QTL+F  K+ AV +TL +++
Sbjct  4   LALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTG  63

Query  67  GWLLNIAIRFTTRLYEQIPN  86
            W+    I+F    ++ I+ 
Sbjct  64  RWIGVELIQFINMAFDLIAR  83

59) SG2083 in NC_007712


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 53.7 bits (184),  Expect = 8e-09, Method: Compositional matrix adjust.
 Identities = 29/68 (43%), Positives = 54/68 (80%), Gaps = 0/68 (0%)

Query  9   NKALYLVLMMAAGPIIVATLVGLLVGLFQTVLQLQEQTLPFGIKllsvtlclfllSGWYG  68
           +++++LV++++A P+ VA LVG++ +L+Q+++Q+Q+QTLPFGIKL +V + L + + W G
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  69  ETLLQFSH  76
             L+QF +
Sbjct  68  VELIQFIN  75

60) Dd586_1881 in NC_013592


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 52.6 bits (180),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 58/83 (70%), Positives = 75/83 (91%), Gaps = 0/83 (0%)

Query  1   METLTLFRQAmvlvvmlsappllvavvvgvlisllQAVMQLQDQTLPFavklvavglvla  60
           ME+L+LF+Q+M LVV+L+APPL VAV+VGV+ SLLQA+MQ+QDQTLPF++KL AVG+ LA
Sbjct  1   MEALALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLA  60

Query  61  MTGRWIGVELIQLAVMAFNMIEQ  83
           MTGRWIGVELIQ+  MAF++I +
Sbjct  61  MTGRWIGVELIQFINMAFDLIAR  83

61) Dd1591_1884 in NC_012912


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 52.4 bits (179),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 58/83 (70%), Positives = 74/83 (90%), Gaps = 0/83 (0%)

Query  1   METLNLFRQAmvlvvmlsappllvavvvgvlisllQAVMQLQDQTLPFavklvavglvla  60
           ME+L LF+Q+M LVV+L+APPL VAV+VGV+ SLLQA+MQ+QDQTLPF++KL AVG+ LA
Sbjct  1   MEALALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLA  60

Query  61  MTGRWIGVELIQLAMMAFNMIEQ  83
           MTGRWIGVELIQ+  MAF++I +
Sbjct  61  MTGRWIGVELIQFINMAFDLIAR  83

62) hrcS in NC_014500


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 52.4 bits (179),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 58/86 (68%), Positives = 76/86 (89%), Gaps = 0/86 (0%)

Query  1   METLNLFRQAmvlvvmlsappllvavvvgvlisllQAVMQLQDQTLPFavklvavglvla  60
           ME+L LF+Q+M LVV+L+APPL VAV+VGV+ SLLQA+MQ+QDQTLPF++KL AVG+ LA
Sbjct  1   MEALALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLA  60

Query  61  MTGRWIGVELIQLAMLAFNMIEQTRV  86
           MTGRWIGVELIQ+  +AF++I ++ V
Sbjct  61  MTGRWIGVELIQFINMAFDLIARSGV  86

63) MXAN_2448 in NC_008095


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 52.4 bits (179),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 34/72 (48%), Positives = 54/72 (75%), Gaps = 0/72 (0%)

Query  9   QEALFLVLVASAPPVLMSLLVGFIISLFQATTQIQEQTLTFAPKvvavfgvlalagPWIG  68
           ++++FLV++ +APP+ +++LVG I SL+QA  QIQ+QTL F+ K+ AV   LA++G WIG
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  69  SQLVRFTFHVFD  80
            +L++F    FD
Sbjct  68  VELIQFINMAFD  79

64) bsaX in NC_006349


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 51.3 bits (175),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 28/68 (42%), Positives = 50/68 (74%), Gaps = 0/68 (0%)

Query  9   DKAILLVILLCAAPVAVATVVGLAIGLFQTVTQLQEQTLPFGLKMLAVFGCLMMLSGWFG  68
            ++++LV++L A+P++VA +VG+  +L+Q++ Q+Q+QTLPFG+K+ AV   L M + W+G
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  69  GKLLAFAT  76
             L+ F  
Sbjct  68  VELIQFIN  75

65) bsaX in NC_008835


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 51.3 bits (175),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 28/68 (42%), Positives = 50/68 (74%), Gaps = 0/68 (0%)

Query  9   DKAILLVILLCAAPVAVATVVGLAIGLFQTVTQLQEQTLPFGLKMLAVFGCLMMLSGWFG  68
            ++++LV++L A+P++VA +VG+  +L+Q++ Q+Q+QTLPFG+K+ AV   L M + W+G
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  69  GKLLAFAT  76
             L+ F  
Sbjct  68  VELIQFIN  75

66) bsaX in NC_009079


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 51.3 bits (175),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 28/68 (42%), Positives = 50/68 (74%), Gaps = 0/68 (0%)

Query  9   DKAILLVILLCAAPVAVATVVGLAIGLFQTVTQLQEQTLPFGLKMLAVFGCLMMLSGWFG  68
            ++++LV++L A+P++VA +VG+  +L+Q++ Q+Q+QTLPFG+K+ AV   L M + W+G
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  69  GKLLAFAT  76
             L+ F  
Sbjct  68  VELIQFIN  75

67) bsaX in NC_017832


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 51.3 bits (175),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 28/68 (42%), Positives = 50/68 (74%), Gaps = 0/68 (0%)

Query  9   DKAILLVILLCAAPVAVATVVGLAIGLFQTVTQLQEQTLPFGLKMLAVFGCLMMLSGWFG  68
            ++++LV++L A+P++VA +VG+  +L+Q++ Q+Q+QTLPFG+K+ AV   L M + W+G
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  69  GKLLAFAT  76
             L+ F  
Sbjct  68  VELIQFIN  75

68) BURPS1106A_A2078 in NC_009078


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 51.3 bits (175),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 28/68 (42%), Positives = 50/68 (74%), Gaps = 0/68 (0%)

Query  9   DKAILLVILLCAAPVAVATVVGLAIGLFQTVTQLQEQTLPFGLKMLAVFGCLMMLSGWFG  68
            ++++LV++L A+P++VA +VG+  +L+Q++ Q+Q+QTLPFG+K+ AV   L M + W+G
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  69  GKLLAFAT  76
             L+ F  
Sbjct  68  VELIQFIN  75

69) bsaX in NC_007435


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 51.3 bits (175),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 28/68 (42%), Positives = 50/68 (74%), Gaps = 0/68 (0%)

Query  9   DKAILLVILLCAAPVAVATVVGLAIGLFQTVTQLQEQTLPFGLKMLAVFGCLMMLSGWFG  68
            ++++LV++L A+P++VA +VG+  +L+Q++ Q+Q+QTLPFG+K+ AV   L M + W+G
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  69  GKLLAFAT  76
             L+ F  
Sbjct  68  VELIQFIN  75

70) BURPS668_A2166 in NC_009075


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 51.3 bits (175),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 28/68 (42%), Positives = 50/68 (74%), Gaps = 0/68 (0%)

Query  9   DKAILLVILLCAAPVAVATVVGLAIGLFQTVTQLQEQTLPFGLKMLAVFGCLMMLSGWFG  68
            ++++LV++L A+P++VA +VG+  +L+Q++ Q+Q+QTLPFG+K+ AV   L M + W+G
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  69  GKLLAFAT  76
             L+ F  
Sbjct  68  VELIQFIN  75

71) bsaX in NC_006351


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 51.3 bits (175),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 28/68 (42%), Positives = 50/68 (74%), Gaps = 0/68 (0%)

Query  9   DKAILLVILLCAAPVAVATVVGLAIGLFQTVTQLQEQTLPFGLKMLAVFGCLMMLSGWFG  68
            ++++LV++L A+P++VA +VG+  +L+Q++ Q+Q+QTLPFG+K+ AV   L M + W+G
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  69  GKLLAFAT  76
             L+ F  
Sbjct  68  VELIQFIN  75

72) BDL_4845 in NC_021877


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 51.3 bits (175),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 28/68 (42%), Positives = 50/68 (74%), Gaps = 0/68 (0%)

Query  9   DKAILLVILLCAAPVAVATVVGLAIGLFQTVTQLQEQTLPFGLKMLAVFGCLMMLSGWFG  68
            ++++LV++L A+P++VA +VG+  +L+Q++ Q+Q+QTLPFG+K+ AV   L M + W+G
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  69  GKLLAFAT  76
             L+ F  
Sbjct  68  VELIQFIN  75

73) BTH_II0837 in NC_007650


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 51.3 bits (175),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 28/68 (42%), Positives = 50/68 (74%), Gaps = 0/68 (0%)

Query  9   DKAILLVILLCAAPVAVATVVGLAIGLFQTVTQLQEQTLPFGLKMLAVFGCLMMLSGWFG  68
            ++++LV++L A+P++VA +VG+  +L+Q++ Q+Q+QTLPFG+K+ AV   L M + W+G
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  69  GKLLAFAT  76
             L+ F  
Sbjct  68  VELIQFIN  75

74) BTI_4015 in NC_021174


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 51.3 bits (175),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 28/68 (42%), Positives = 50/68 (74%), Gaps = 0/68 (0%)

Query  9   DKAILLVILLCAAPVAVATVVGLAIGLFQTVTQLQEQTLPFGLKMLAVFGCLMMLSGWFG  68
            ++++LV++L A+P++VA +VG+  +L+Q++ Q+Q+QTLPFG+K+ AV   L M + W+G
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  69  GKLLAFAT  76
             L+ F  
Sbjct  68  VELIQFIN  75

75) S70_09790 in NC_017731


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 51.3 bits (175),  Expect = 5e-08, Method: Compositional matrix adjust.
 Identities = 28/66 (43%), Positives = 53/66 (81%), Gaps = 0/66 (0%)

Query  9   NKAMLLIVMLSAIPVIVATVVGLLVGLIQTVTQLQEQTLPFGIKLLAVFGSLFMISGWLA  68
           +++M+L+V+L+A P+ VA +VG++ +L+Q++ Q+Q+QTLPFGIKL AV  +L M + W++
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  69  DKVMNY  74
             ++++
Sbjct  68  VELIQF  73

76) ysaS in NC_008800


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 51.1 bits (174),  Expect = 5e-08, Method: Compositional matrix adjust.
 Identities = 28/66 (43%), Positives = 53/66 (81%), Gaps = 0/66 (0%)

Query  9   NKAMLLIVLLSAIPVMVATVVGLLIGLIQTVTQLQEQTLPFGIKLLAVFGSLFMISGWLS  68
           +++M+L+V+L+A P+ VA +VG++ +L+Q++ Q+Q+QTLPFGIKL AV  +L M + W++
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  69  DKVMNY  74
             ++++
Sbjct  68  VELIQF  73

77) BPC006_II2060 in NC_018529


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 51.1 bits (174),  Expect = 5e-08, Method: Compositional matrix adjust.
 Identities = 28/68 (42%), Positives = 50/68 (74%), Gaps = 0/68 (0%)

Query  22  DKAILLVILLCAAPVAVATVVGLAIGLFQTVTQLQEQTLPFGLKMLAVFGCLMMLSGWFG  81
            ++++LV++L A+P++VA +VG+  +L+Q++ Q+Q+QTLPFG+K+ AV   L M + W+G
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  82  GKLLAFAT  89
             L+ F  
Sbjct  68  VELIQFIN  75

78) fliQ in NC_017955


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 50.5 bits (172),  Expect = 8e-08, Method: Compositional matrix adjust.
 Identities = 33/76 (44%), Positives = 52/76 (69%), Gaps = 0/76 (0%)

Query  11  TQTMLVAAKVAAPILLTALLVGFMISLFQAATQIQEQTLSFVPKMIAVAIALLVTGNWVL  70
            Q M++   ++AP L  A+LVG + SL+QA  QIQ+QTL+F  K+ AV+++L +TG W+ 
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  71  SELISFTQQLFGELPR  86
            ELI F +  F+ ++R
Sbjct  68  VELIQFINMAFDLIAR  83

79) spaQ in NC_012751


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 50.3 bits (171),  Expect = 9e-08, Method: Compositional matrix adjust.
 Identities = 27/66 (41%), Positives = 51/66 (78%), Gaps = 0/66 (0%)

Query  9   NKALYLILTLSAIPVAVATAVGLIIGLIQTVTQLQEQTLPFGIKllsvslclfllAGWYG  68
           +++++L++ L+A P++VA  VG+I +L+Q++ Q+Q+QTLPFGIKL +V++ L + + W G
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  69  DTLLAY  74
             L+ +
Sbjct  68  VELIQF  73

80) H650_14840 in NC_021500


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 49.2 bits (167),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 34/79 (44%), Positives = 60/79 (76%), Gaps = 0/79 (0%)

Query  5   ELLKQGLILAMMISvppvvtavvagiiiaLLQSVMQLQDATLPFALKMVAVAVILAFSGH  64
            L+KQG++L ++++ PP+  AV+ G+I +LLQ++MQ+QD TLPF++K+ AV++ LA +G+
Sbjct  5   ALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGR  64

Query  65  WMLQKTVQLSINCFDLISQ  83
           W+    +Q+    FDLI++
Sbjct  65  WIGVELIQFINMAFDLIAR  83

81) S58_72180 in NC_020453


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 48.7 bits (165),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 34/67 (51%), Positives = 50/67 (75%), Gaps = 0/67 (0%)

Query  16  RGLTVVLIFAMPPLGVAMVVGLLVSILQAATQIQDQVLPQTIKLIAVVATLAVFGAVLAA  75
           +G+ +V+I++ PPLGVA++VG++ S+LQA  QIQDQ LP  IKL AV  TLA+ G  ++ 
Sbjct  9   QGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGV  68

Query  76  PLIQYTD  82
            LIQ+ +
Sbjct  69  ELIQFIN  75

82) escS in NC_013364


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 48.4 bits (164),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 32/75 (43%), Positives = 55/75 (74%), Gaps = 0/75 (0%)

Query  12  QTFWIIFILSLPTviaasvigiiisLVQAITQLQDQTLPFLLKIIAVFATLALTYHWMGT  71
           Q   ++ IL+ P +  A ++G+I SL+QA+ Q+QDQTLPF +K+ AV  TLA+T +W+G 
Sbjct  9   QGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGV  68

Query  72  TIINFSSIIFEMIPK  86
            +I+F ++ F++I++
Sbjct  69  ELIQFINMAFDLIAR  83

83) escS in NC_011601


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 48.4 bits (164),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 32/75 (43%), Positives = 55/75 (74%), Gaps = 0/75 (0%)

Query  12  QTFWIIFILSLPTviaasvigiiisLVQAITQLQDQTLPFLLKIIAVFATLALTYHWMGT  71
           Q   ++ IL+ P +  A ++G+I SL+QA+ Q+QDQTLPF +K+ AV  TLA+T +W+G 
Sbjct  9   QGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGV  68

Query  72  TIINFSSIIFEMIPK  86
            +I+F ++ F++I++
Sbjct  69  ELIQFINMAFDLIAR  83

84) escS in NC_002655


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 48.4 bits (164),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 32/75 (43%), Positives = 55/75 (74%), Gaps = 0/75 (0%)

Query  12  QTFWIIFILSLPTviaasvigiiisLVQAITQLQDQTLPFLLKIIAVFATLALTYHWMGT  71
           Q   ++ IL+ P +  A ++G+I SL+QA+ Q+QDQTLPF +K+ AV  TLA+T +W+G 
Sbjct  9   QGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGV  68

Query  72  TIINFSSIIFEMIPK  86
            +I+F ++ F++I++
Sbjct  69  ELIQFINMAFDLIAR  83

85) ECs4582 in NC_002695


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 48.4 bits (164),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 32/75 (43%), Positives = 55/75 (74%), Gaps = 0/75 (0%)

Query  12  QTFWIIFILSLPTviaasvigiiisLVQAITQLQDQTLPFLLKIIAVFATLALTYHWMGT  71
           Q   ++ IL+ P +  A ++G+I SL+QA+ Q+QDQTLPF +K+ AV  TLA+T +W+G 
Sbjct  9   QGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGV  68

Query  72  TIINFSSIIFEMIPK  86
            +I+F ++ F++I++
Sbjct  69  ELIQFINMAFDLIAR  83

86) escS in NC_013008


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 48.4 bits (164),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 32/75 (43%), Positives = 55/75 (74%), Gaps = 0/75 (0%)

Query  12  QTFWIIFILSLPTviaasvigiiisLVQAITQLQDQTLPFLLKIIAVFATLALTYHWMGT  71
           Q   ++ IL+ P +  A ++G+I SL+QA+ Q+QDQTLPF +K+ AV  TLA+T +W+G 
Sbjct  9   QGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGV  68

Query  72  TIINFSSIIFEMIPK  86
            +I+F ++ F++I++
Sbjct  69  ELIQFINMAFDLIAR  83

87) escS in NC_013941


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 48.4 bits (164),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 32/75 (43%), Positives = 55/75 (74%), Gaps = 0/75 (0%)

Query  13  QTFWIIFILSLPTviaasvigiiisLVQAITQLQDQTLPFLLKIIAVFATLALTYHWMGT  72
           Q   ++ IL+ P +  A ++G+I SL+QA+ Q+QDQTLPF +K+ AV  TLA+T +W+G 
Sbjct  9   QGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGV  68

Query  73  TIINFSSIIFEMIPK  87
            +I+F ++ F++I++
Sbjct  69  ELIQFINMAFDLIAR  83

88) ECO55CA74_21285 in NC_017656


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 48.4 bits (164),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 32/75 (43%), Positives = 55/75 (74%), Gaps = 0/75 (0%)

Query  12  QTFWIIFILSLPTviaasvigiiisLVQAITQLQDQTLPFLLKIIAVFATLALTYHWMGT  71
           Q   ++ IL+ P +  A ++G+I SL+QA+ Q+QDQTLPF +K+ AV  TLA+T +W+G 
Sbjct  9   QGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGV  68

Query  72  TIINFSSIIFEMIPK  86
            +I+F ++ F++I++
Sbjct  69  ELIQFINMAFDLIAR  83

89) CDCO157_4317 in NC_017906


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 48.4 bits (164),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 32/75 (43%), Positives = 55/75 (74%), Gaps = 0/75 (0%)

Query  12  QTFWIIFILSLPTviaasvigiiisLVQAITQLQDQTLPFLLKIIAVFATLALTYHWMGT  71
           Q   ++ IL+ P +  A ++G+I SL+QA+ Q+QDQTLPF +K+ AV  TLA+T +W+G 
Sbjct  9   QGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGV  68

Query  72  TIINFSSIIFEMIPK  86
            +I+F ++ F++I++
Sbjct  69  ELIQFINMAFDLIAR  83

90) Sked_31050 in NC_013521


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 47.7 bits (161),  Expect = 5e-07, Method: Compositional matrix adjust.
 Identities = 30/74 (41%), Positives = 50/74 (68%), Gaps = 0/74 (0%)

Query  12  QGLIIAAKLCAPVLITALVVGFAVSLLQSITQIQEVTLSFVPKAIAVSLALLISGHWMIS  71
           QG+++   L AP L  A++VG   SLLQ++ QIQ+ TL+F  K  AV+++L ++G+W+  
Sbjct  9   QGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGV  68

Query  72  EMISFTHELFGRIP  85
           E+I F +  F+ I+
Sbjct  69  ELIQFINMAFDLIA  82

91) fliQ in NC_006156


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 47.7 bits (161),  Expect = 6e-07, Method: Compositional matrix adjust.
 Identities = 28/66 (43%), Positives = 47/66 (72%), Gaps = 0/66 (0%)

Query  17  IMILSAPMLIIALIVGLLISIFQAITSIQDQTLSFIPKIIVILLTIVIFGPWILNKLMQF  76
           ++IL+AP L +A++VG++ S++QA+  IQDQTL+F  K+  + +T+ + G WI   L+QF
Sbjct  14  VVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGVELIQF  73

Query  77  TYMIFN  82
             M F+
Sbjct  74  INMAFD  79

92) yscS in NC_015717


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 46.9 bits (158),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 29/64 (46%), Positives = 48/64 (75%), Gaps = 0/64 (0%)

Query  23  PPIvvatvvgvvLSLIQAITQIQEQTLSFAVKLIVVSVVILGTASWLGGELYRYTERVFD  82
           PP+ VA +VGV+ SL+QA+ QIQ+QTL+F++KL  V++ +  T+ W+G EL ++ +  FD
Sbjct  20  PPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGVELIQFINMAFD  79

Query  83  SIGQ  86
            I++
Sbjct  80  LIAR  83

93) escS in NC_013353


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 46.9 bits (158),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 56/75 (75%), Gaps = 0/75 (0%)

Query  12  QTLWIIFILSLPTviaasvvgiiislvQAITQLQDQTLPFLLKIIAVFATLALTYHWMGT  71
           Q + ++ IL+ P +  A +VG+I SL+QA+ Q+QDQTLPF +K+ AV  TLA+T +W+G 
Sbjct  9   QGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGV  68

Query  72  TIINFSSIIFEMIPK  86
            +I+F ++ F++I++
Sbjct  69  ELIQFINMAFDLIAR  83

94) escS in NC_013361


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 46.9 bits (158),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 56/75 (75%), Gaps = 0/75 (0%)

Query  12  QTLWIIFILSLPTviaasvvgiiislvQAITQLQDQTLPFLLKIIAVFATLALTYHWMGT  71
           Q + ++ IL+ P +  A +VG+I SL+QA+ Q+QDQTLPF +K+ AV  TLA+T +W+G 
Sbjct  9   QGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGV  68

Query  72  TIINFSSIIFEMIPK  86
            +I+F ++ F++I++
Sbjct  69  ELIQFINMAFDLIAR  83

95) Noca_0742 in NC_008699


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 46.6 bits (157),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 26/63 (42%), Positives = 42/63 (67%), Gaps = 0/63 (0%)

Query  20  LSAPILVTSLVIGFAISLFQSLTQIQEATLAFVPKLIGVGIALLLSGNWMMHTLVSFTND  79
           L+AP L  ++++G   SL+Q+L QIQ+ TL+F  KL +VG++L ++G W+   L+ F N 
Sbjct  17  LTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGVELIQFINM  76

Query  80  LFA  82
            F 
Sbjct  77  AFD  79

96) fliQ in NC_020134


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 45.3 bits (152),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 29/70 (42%), Positives = 46/70 (66%), Gaps = 0/70 (0%)

Query  16  IIKLCAPLLGVALIVGLAISIFQATTQIQEQTLSFVPKILAVFLSLFIFGSWLMTTLKEF  75
           ++ L AP LGVA++VG+  S++QA  QIQ+QTL+F  K+ AV ++L + G W+   L +F
Sbjct  14  VVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGVELIQF  73

Query  76  TLRIYENILR  85
               ++ I R
Sbjct  74  INMAFDLIAR  83

97) fliQ in NC_020887


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 45.3 bits (152),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 29/70 (42%), Positives = 46/70 (66%), Gaps = 0/70 (0%)

Query  16  IIKLCAPLLGVALIVGLAISIFQATTQIQEQTLSFVPKILAVFLSLFIFGSWLMTTLKEF  75
           ++ L AP LGVA++VG+  S++QA  QIQ+QTL+F  K+ AV ++L + G W+   L +F
Sbjct  14  VVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGVELIQF  73

Query  76  TLRIYENILR  85
               ++ I R
Sbjct  74  INMAFDLIAR  83

98) GYMC10_4174 in NC_013406


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 45.0 bits (151),  Expect = 4e-06, Method: Compositional matrix adjust.
 Identities = 27/67 (41%), Positives = 49/67 (74%), Gaps = 0/67 (0%)

Query  12  QAVYIVLQVSAPMLVLALVVGLIISIFQATTQIQEQTLAFVPKIIIVLVALLLFGPWILT  71
           Q++++V+ ++AP L +A++VG+I S++QA  QIQ+QTL+F  K+  V ++L + G WI  
Sbjct  9   QGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGV  68

Query  72  TLVDFTH  78
            L++F +
Sbjct  69  ELIQFIN  75

99) BH0274 in NC_010673


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 44.5 bits (149),  Expect = 5e-06, Method: Compositional matrix adjust.
 Identities = 28/66 (43%), Positives = 46/66 (70%), Gaps = 0/66 (0%)

Query  17  IIILSAPMLIMALIVGLLVSIFQAVTSIQDQTLSFIPKIIIILLTLVIFGPWILKKLMQF  76
           ++IL+AP L +A++VG++ S++QA+  IQDQTL+F  K+  + +TL + G WI   L+QF
Sbjct  14  VVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGVELIQF  73

Query  77  AFIVFS  82
             + F 
Sbjct  74  INMAFD  79

100) fliQ in NC_017717


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 44.2 bits (148),  Expect = 6e-06, Method: Compositional matrix adjust.
 Identities = 26/62 (42%), Positives = 43/62 (70%), Gaps = 0/62 (0%)

Query  21  SAPMLIIALIVGLLISIFQAITSIQDQTLSFVPKIIVILLTIVIFGPWILNKLMQFTYMI  80
           +AP L +A++VG++ S++QA+  IQDQTL+F  K+  + +T+ + G WI   L+QF  M 
Sbjct  18  TAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGVELIQFINMA  77

Query  81  FN  82
           F+
Sbjct  78  FD  79

101) SG1306 in NC_007712


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 43.7 bits (146),  Expect = 9e-06, Method: Compositional matrix adjust.
 Identities = 33/70 (48%), Positives = 46/70 (66%), Gaps = 0/70 (0%)

Query  9   LVTQLMWIVLITSLPVVLVASAVGILVSLFQALTQIQDQTLQFMIKLLAVAITLMASYPW  68
           L  Q M +V+I + P + VA  VG++ SL+QAL QIQDQTL F IKL AV++TL  +  W
Sbjct  6   LFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRW  65

Query  69  LGGILLGYTR  78
           +G  L+ +  
Sbjct  66  IGVELIQFIN  75

102) fliQ in NC_018887


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 43.5 bits (145),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 26/62 (42%), Positives = 43/62 (70%), Gaps = 0/62 (0%)

Query  21  SAPMLIIALIVGLLISIFQAITSIQDQTLSFIPKIIVILLTVVIFGPWILNKLMQFTYMI  80
           +AP L +A++VG++ S++QA+  IQDQTL+F  K+  + +T+ + G WI   L+QF  M 
Sbjct  18  TAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGVELIQFINMA  77

Query  81  FN  82
           F+
Sbjct  78  FD  79

103) fliQ in NC_017238


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 43.5 bits (145),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 26/62 (42%), Positives = 43/62 (70%), Gaps = 0/62 (0%)

Query  21  SAPMLIIALIVGLLISIFQAITSIQDQTLSFIPKIIVILLTVVIFGPWILNKLMQFTYMI  80
           +AP L +A++VG++ S++QA+  IQDQTL+F  K+  + +T+ + G WI   L+QF  M 
Sbjct  18  TAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGVELIQFINMA  77

Query  81  FN  82
           F+
Sbjct  78  FD  79

104) fliQ in NC_015921


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 42.9 bits (143),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 26/62 (42%), Positives = 42/62 (68%), Gaps = 0/62 (0%)

Query  21  SAPMLIIALIVGLLISIFQAITSIQDQTLSFIPKIIVILLTIVIFGPWILNKLMQFTYMI  80
           +AP L +A++VG++ S++QA+  IQDQTL+F  K+  + +T+ + G WI   L+QF  M 
Sbjct  18  TAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGVELIQFINMA  77

Query  81  FS  82
           F 
Sbjct  78  FD  79

105) fliQ in NC_017403


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 42.9 bits (143),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 26/62 (42%), Positives = 42/62 (68%), Gaps = 0/62 (0%)

Query  21  SAPMLIIALIVGLLISIFQAITSIQDQTLSFIPKIIVILLTIVIFGPWILNKLMQFTYMI  80
           +AP L +A++VG++ S++QA+  IQDQTL+F  K+  + +T+ + G WI   L+QF  M 
Sbjct  18  TAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGVELIQFINMA  77

Query  81  FS  82
           F 
Sbjct  78  FD  79

106) EUBELI_00827 in NC_012778


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 42.4 bits (141),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 28/69 (41%), Positives = 48/69 (70%), Gaps = 0/69 (0%)

Query  11  RQTIWVIVKTSVPLLLVSMIVGLIISLFQTLTSIQEQTLTFVPKllaimialmlmGNWIL  70
           +Q + ++V  + P L V+++VG+I SL+Q+L  IQ+QTL F  KL A+ ++L + G WI 
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  71  NEIVSFMQM  79
            E++ F++M
Sbjct  68  VELIQFINM  76

107) MU9_27 in NC_020418


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 42.1 bits (140),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 30/73 (42%), Positives = 51/73 (70%), Gaps = 0/73 (0%)

Query  8   DKGIYLVIMLSLLPVSVAtvvgltvgllqtvtqIQEQTLPFGLKLIAVFVCILMQLSWLG  67
            +G++LV++L+  P++VA +VG+  +LLQ++ QIQ+QTLPFG+KL AV + + M   W+G
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  68  DSMLSYAREMFSL  80
             ++ +    F L
Sbjct  68  VELIQFINMAFDL  80

108) I871_01460 in NC_022079


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 41.4 bits (137),  Expect = 5e-05, Method: Compositional matrix adjust.
 Identities = 28/67 (42%), Positives = 43/67 (65%), Gaps = 0/67 (0%)

Query  20  LSAPMLITALIVGLLVSIFQAITSIQDQTLSFVPKIIIILLTLVLFGPWILKKLMQFAFV  79
           L+AP L  A++VG++ S++QA+  IQDQTL+F  K+  + +TL + G WI   L+QF  +
Sbjct  17  LTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGVELIQFINM  76

Query  80  LFSQIQN  86
            F  I  
Sbjct  77  AFDLIAR  83

109) yscS in NC_016642


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 41.1 bits (136),  Expect = 6e-05, Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 53/72 (74%), Gaps = 0/72 (0%)

Query  11  SEAMILVMMLSLPPIIvaslvglavsllqalTQMQEQTIQFGVKLIAVALTLFMMSSFLG  70
            ++M+LV++L+ PP+ VA LVG+  SLLQAL Q+Q+QT+ FG+KL AV++TL M +  +G
Sbjct  8   KQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIG  67

Query  71  SETIGFTQALFD  82
            E I F +  FD
Sbjct  68  VELIQFINMAFD  79

110) BT0274 in NC_008710


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 40.3 bits (133),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 27/63 (43%), Positives = 41/63 (66%), Gaps = 0/63 (0%)

Query  20  LSAPMLITALIVGLLISIFQAVTSIQDQTLSFIPKIIIILLTLVIFGPWILKKLMLFAFM  79
           L+AP L  A++VG++ S++QA+  IQDQTL+F  K+  + +TL + G WI   L+ F  M
Sbjct  17  LTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGVELIQFINM  76

Query  80  VFS  82
            F 
Sbjct  77  AFD  79

111) Q7M_279 in NC_017808


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 39.3 bits (129),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 27/67 (41%), Positives = 44/67 (66%), Gaps = 0/67 (0%)

Query  20  LSAPMLITALIVGLLVSIFQAVTSIQDQTLSFIPKiiiillvlviFGPWILKKLMQFTSL  79
           L+AP L  A++VG++ S++QA+  IQDQTL+F  K+  + + L + G WI   L+QF ++
Sbjct  17  LTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGVELIQFINM  76

Query  80  VFNQIQN  86
            F+ I  
Sbjct  77  AFDLIAR  83

112) fliQ in NC_001318


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 38.5 bits (126),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 25/62 (41%), Positives = 41/62 (67%), Gaps = 0/62 (0%)

Query  21  SAPMLIIALIVGLLISIFQAITSIQDQTLSFIPKiivillviviFGPWILNKLMQFTYMI  80
           +AP L +A++VG++ S++QA+  IQDQTL+F  K+  + + + + G WI   L+QF  M 
Sbjct  18  TAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGVELIQFINMA  77

Query  81  FS  82
           F 
Sbjct  78  FD  79

113) L144_01350 in NC_022048


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 38.5 bits (126),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 25/62 (41%), Positives = 41/62 (67%), Gaps = 0/62 (0%)

Query  21  SAPMLIIALIVGLLISIFQAITSIQDQTLSFIPKiivillviviFGPWILNKLMQFTYMI  80
           +AP L +A++VG++ S++QA+  IQDQTL+F  K+  + + + + G WI   L+QF  M 
Sbjct  18  TAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGVELIQFINMA  77

Query  81  FS  82
           F 
Sbjct  78  FD  79

114) fliQ in NC_017418


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 38.5 bits (126),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 25/62 (41%), Positives = 41/62 (67%), Gaps = 0/62 (0%)

Query  21  SAPMLIIALIVGLLISIFQAITSIQDQTLSFIPKiivillviviFGPWILNKLMQFTYMI  80
           +AP L +A++VG++ S++QA+  IQDQTL+F  K+  + + + + G WI   L+QF  M 
Sbjct  18  TAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGVELIQFINMA  77

Query  81  FS  82
           F 
Sbjct  78  FD  79

115) fliQ in NC_011728


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 38.5 bits (126),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 25/62 (41%), Positives = 41/62 (67%), Gaps = 0/62 (0%)

Query  21  SAPMLIIALIVGLLISIFQAITSIQDQTLSFIPKiivillviviFGPWILNKLMQFTYMI  80
           +AP L +A++VG++ S++QA+  IQDQTL+F  K+  + + + + G WI   L+QF  M 
Sbjct  18  TAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGVELIQFINMA  77

Query  81  FS  82
           F 
Sbjct  78  FD  79

116) fliQ in NC_011229


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 37.4 bits (122),  Expect = 7e-04, Method: Compositional matrix adjust.
 Identities = 27/67 (41%), Positives = 43/67 (65%), Gaps = 0/67 (0%)

Query  20  LSAPMLITALIVGLLVSIFQAVTSIQDQTLSFIPKiiiillvlviFGPWILKKLMQFTFL  79
           L+AP L  A++VG++ S++QA+  IQDQTL+F  K+  + + L + G WI   L+QF  +
Sbjct  17  LTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGVELIQFINM  76

Query  80  VFNQIQN  86
            F+ I  
Sbjct  77  AFDLIAR  83

117) fliQ in NC_014483


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 35.8 bits (116),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 27/65 (42%), Positives = 49/65 (76%), Gaps = 0/65 (0%)

Query  12  QAVYIVLKVSAPMlilglvvgliisiFQATTQIQEQTLAFVPKIVAVLLALLLFGPWILT  71
           Q++++V+ ++AP L ++++VG+I S++QA  QIQ+QTL+F  K+ AV ++L + G WI  
Sbjct  9   QGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGV  68

Query  72  TLVDF  76
            L++F
Sbjct  69  ELIQF  73

118) fliQ in NC_017542


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 35.8 bits (116),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 27/65 (42%), Positives = 49/65 (76%), Gaps = 0/65 (0%)

Query  12  QAVYIVLKVSAPMlilglvvgliisiFQATTQIQEQTLAFVPKIVAVLLALLLFGPWILT  71
           Q++++V+ ++AP L ++++VG+I S++QA  QIQ+QTL+F  K+ AV ++L + G WI  
Sbjct  9   QGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGV  68

Query  72  TLVDF  76
            L++F
Sbjct  69  ELIQF  73

119) PPSC2_c2105 in NC_014622


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 35.8 bits (116),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 27/65 (42%), Positives = 49/65 (76%), Gaps = 0/65 (0%)

Query  12  QAVYIVLKVSAPMlilglvvgliisiFQATTQIQEQTLAFVPKIVAVLLALLLFGPWILT  71
           Q++++V+ ++AP L ++++VG+I S++QA  QIQ+QTL+F  K+ AV ++L + G WI  
Sbjct  9   QGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGV  68

Query  72  TLVDF  76
            L++F
Sbjct  69  ELIQF  73

120) Despr_2237 in NC_014972


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 34.8 bits (112),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 29/72 (41%), Positives = 47/72 (66%), Gaps = 1/72 (1%)

Query  17  ILLTSAPMLIAAMVIGLIISIFQAATQINEQTMTFIPKIVAVFITLLIFGPWIMELLITF  76
           ++LT++P+ +A +V G+I S++QA  QI++QT+ F  K+ AV +TL + G WI   LI F
Sbjct  15  VILTAPPLGVAVLV-GVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGVELIQF  73

Query  77  TTGIINQIATVG  88
               ++ IA  G
Sbjct  74  INMAFDLIARSG  85

121) HPL003_18220 in NC_016641


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 34.5 bits (111),  Expect = 0.005, Method: Compositional matrix adjust.
 Identities = 27/65 (42%), Positives = 48/65 (74%), Gaps = 0/65 (0%)

Query  12  QAVYTVLKVSAPMlilglvvgliisiFQATTQIQEQTLAFVPKIVAVLLALLLFGPWILT  71
           Q+++ V+ ++AP L ++++VG+I S++QA  QIQ+QTL+F  K+ AV ++L + G WI  
Sbjct  9   QGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLAMTGRWIGV  68

Query  72  TLVDF  76
            L++F
Sbjct  69  ELIQF  73

122) fliQ in NC_007925


> NC_004578_P1|40|G31|28868602|NP_791221.1|Pseudomonas_syringae_pv._tomato_str._DC3000|-|31570..31836|hrcS|PSPTO_1394|type 
III secretion protein HrcS
Length=88

 Score = 25.9 bits (78),  Expect = 2.2, Method: Compositional matrix adjust.
 Identities = 26/62 (42%), Positives = 47/62 (76%), Gaps = 0/62 (0%)

Query  4   METLDVARDAIWTIVIvssplmvvglvvgvavslvQALTQIQEQTLVFVPKIIAIFVTLI  63
           ME+L + ++++  +VI+++P + V+++VGV  SL+QAL QIQ+QTL F  K+ A+ +TL 
Sbjct  1   MEALALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQTLPFGIKLAAVGMTLA  60

Query  64  LA  65
           ++
Sbjct  61  MT  62