Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
type III secretion protein HrcS |
NC_004578 (Pseudomonas syringae DC3000) |
3e-29 |
95 |
|
type III secretion component protein HrcS |
NC_005773 (Pseudomonas syringae 1448A) |
1e-27 |
97 |
|
type III secretion protein HrcS |
NC_007005 (Pseudomonas syringae B728a) |
1e-22 |
99 |
|
type III secretion protein RscS |
NC_020209 (Pseudomonas poae RE*1-1-14) |
3e-21 |
78 |
|
type III secretion protein RscS |
NC_017911 (Pseudomonas fluorescens A506) |
3e-21 |
74 |
|
type III secretion protein, HrpO family |
NC_022268 (Serratia sp. ATCC 39006) |
2e-19 |
66 |
|
HrpO family type III secretion protein |
NC_009439 (Pseudomonas mendocina ymp) |
2e-19 |
92 |
|
type III secretion protein, HrpO family |
NC_020064 (Serratia marcescens FGI94) |
2e-18 |
66 |
|
putative type III secretion membrane protein |
NC_012660 (Pseudomonas fluorescens SBW25) |
9e-16 |
75 |
|
type III secretion protein |
NC_015379 (Pseudomonas brassicacearum NFM421) |
1e-15 |
72 |
|
protein HrcS |
NC_016830 (Pseudomonas fluorescens F113) |
1e-15 |
72 |
|
HrcS protein |
NC_010694 (Erwinia tasmaniensis Et1/99) |
3e-14 |
66 |
|
type III secretion protein HrcS |
NC_017390 (Erwinia pyrifoliae DSM 12163) |
3e-14 |
65 |
|
Hrp/hrc secretion/translocation pathway protein HrcS |
NC_012214 (Erwinia pyrifoliae Ep1/96) |
3e-14 |
65 |
|
hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation pathway-hrcS protein |
NC_017445 (Erwinia sp. Ejp617) |
3e-14 |
65 |
|
type III secretion system protein |
NC_004547 (Pectobacterium atrosepticum SCRI1043) |
6e-14 |
66 |
|
type III secretion system protein |
NC_013971 (Erwinia amylovora ATCC 49946) |
7e-14 |
65 |
|
type III secretion protein HrcS |
NC_013961 (Erwinia amylovora CFBP1430) |
7e-14 |
65 |
|
type III secretion protein |
NC_018525 (Pectobacterium carotovorum PCC21) |
8e-14 |
64 |
|
type III secretion protein, HrpO family |
NC_012917 (Pectobacterium carotovorum PC1) |
1e-13 |
64 |
|
type III secretion protein, HrpO family |
NC_015276 (Marinomonas mediterranea MMB-1) |
4e-12 |
71 |
|
type III secretory pathway subunit EscS |
NC_007645 (Hahella chejuensis KCTC 2396) |
1e-10 |
47 |
|
Type III secretion inner membrane protein (YscS,homologous to flagellar export components |
NC_021285 (Achromobacter xylosoxidans NH44784-1996) |
2e-09 |
49 |
|
type III secretion protein |
NC_019382 (Bordetella bronchiseptica 253) |
2e-09 |
49 |
|
type III secretion protein |
NC_018829 (Bordetella bronchiseptica MO149) |
2e-09 |
49 |
|
type III secretion protein |
NC_002927 (Bordetella bronchiseptica RB50) |
2e-09 |
49 |
|
type III secretion protein |
NC_002928 (Bordetella parapertussis 12822) |
2e-09 |
49 |
|
type III secretion protein |
NC_018828 (Bordetella parapertussis Bpp5) |
2e-09 |
49 |
|
type III secretion protein |
NC_018518 (Bordetella pertussis 18323) |
2e-09 |
48 |
|
putative type III secretion protein |
NC_017223 (Bordetella pertussis CS) |
2e-09 |
48 |
|
type III secretion protein |
NC_002929 (Bordetella pertussis Tohama I) |
2e-09 |
48 |
|
type iii secretion component protein scts |
NC_012962 (Photorhabdus asymbiotica ATCC 43949) |
2e-09 |
52 |
|
type III secretion protein, HrpO family |
NC_011769 (Desulfovibrio vulgaris Miyazaki F) |
2e-09 |
48 |
|
Type III secretion component protein SctS |
NC_005126 (Photorhabdus luminescens TTO1) |
3e-09 |
51 |
|
HrpO family type III secretion protein |
NC_008741 (Desulfovibrio vulgaris DP4) |
5e-09 |
50 |
|
HrpO family type III secretion protein |
NC_005863 (Desulfovibrio vulgaris Hildenborough) |
5e-09 |
50 |
|
type III secretion protein, HrpO family |
NC_017311 (Desulfovibrio vulgaris RCH1) |
5e-09 |
50 |
|
bacterial export protein fliq, family 3 |
NC_014623 (Stigmatella aurantiaca DW4/3-1) |
7e-09 |
46 |
|
type III secretion system protein |
NC_020127 (Lawsonia intracellularis N343) |
2e-08 |
48 |
|
translocation protein in type III secretion |
NC_008011 (Lawsonia intracellularis PHE/MN1-00) |
2e-08 |
48 |
|
type III secretion protein, HrpO family |
NC_013592 (Dickeya dadantii Ech586) |
5e-08 |
72 |
|
AscS protein |
NC_009350 (Aeromonas salmonicida A449) |
5e-08 |
54 |
|
type III secretion inner membrane protein |
NC_014500 (Dickeya dadantii 3937) |
7e-08 |
69 |
|
FliQ/MopD/SpaQ family protein |
NC_020126 (Myxococcus stipitatus DSM 14675) |
7e-08 |
48 |
|
HrpO family type III secretion protein |
NC_012912 (Dickeya zeae Ech1591) |
7e-08 |
72 |
|
FliQ/MopD/SpaQ family protein |
NC_015711 (Myxococcus fulvus HW-1) |
1e-07 |
46 |
|
FliQ/MopD/SpaQ family protein |
NC_017030 (Corallococcus coralloides DSM 2259) |
1e-07 |
48 |
|
hypothetical protein |
NC_021500 (Enterobacter sp. R4-368) |
5e-07 |
42 |
|
type III secretion HrcS protein |
NC_014323 (Herbaspirillum seropedicae SmR1) |
2e-06 |
46 |
|
T3SS structure protein EscS |
NC_013364 (Escherichia coli 11128) |
2e-06 |
41 |
|
EscS |
NC_013941 (Escherichia coli CB9615) |
2e-06 |
41 |
|
T3SS structure protein EscS |
NC_011601 (Escherichia coli E2348/69) |
2e-06 |
41 |
|
hypothetical protein |
NC_002655 (Escherichia coli EDL933) |
2e-06 |
41 |
|
protein EscS |
NC_017656 (Escherichia coli RM12579) |
2e-06 |
41 |
|
EscS |
NC_002695 (Escherichia coli Sakai) |
2e-06 |
41 |
|
LEE-encoded type III secretion system factor |
NC_013008 (Escherichia coli TW14359) |
2e-06 |
41 |
|
protein EscS |
NC_017906 (Escherichia coli Xuzhou21) |
2e-06 |
41 |
|
flagellar biosynthetic protein FliQ |
NC_021505 (Pseudomonas putida NBRC 14164) |
3e-06 |
46 |
|
T3SS structure protein EscS |
NC_013361 (Escherichia coli 11368) |
5e-06 |
42 |
|
T3SS structure protein EscS |
NC_013353 (Escherichia coli 12009) |
5e-06 |
42 |
|
type III secretion apparatus SpaQ |
NC_007712 (Sodalis glossinidius morsitans) |
1e-05 |
45 |
|
type III secretion apparatus protein |
NC_017731 (Providencia stuartii MRSN 2154) |
1e-05 |
43 |
|
type III secretion apparatus protein |
NC_008800 (Yersinia enterocolitica 8081) |
1e-05 |
43 |
|
protein SpaQ |
NC_016830 (Pseudomonas fluorescens F113) |
2e-05 |
41 |
|
surface presentation of antigens protein |
NC_019670 (Pseudomonas sp. UW4) |
2e-05 |
41 |
|
FliQ/MopD/SpaQ family protein |
NC_008095 (Myxococcus xanthus DK 1622) |
2e-05 |
46 |
|
type III secretion system protein |
NC_013971 (Erwinia amylovora ATCC 49946) |
2e-05 |
41 |
|
surface presentation of antigens protein spaQ |
NC_013961 (Erwinia amylovora CFBP1430) |
2e-05 |
41 |
|
flagellar biosynthetic protein FliQ |
NC_009089 (Clostridium difficile 630) |
2e-05 |
41 |
|
flagellar biosynthetic protein FliQ |
NC_013521 (Sanguibacter keddieii DSM 10542) |
4e-05 |
43 |
|
flagellar biosynthetic protein FliQ |
NC_015589 (Desulfotomaculum ruminis DSM 2154) |
5e-05 |
41 |
|
Yop proteins translocation protein S |
NC_016642 (Pseudovibrio sp. FO-BEG1) |
6e-05 |
52 |
|
type III needle complex export protein |
NC_012751 (Candidatus Hamiltonella defensa T5A) |
6e-05 |
43 |
|
Type III secretion inner membrane protein |
NC_021870 (Salmonella bongori N268-08) |
1e-04 |
41 |
|
virulence associated secretory protein |
NC_015761 (Salmonella bongori NCTC 12419) |
1e-04 |
41 |
|
type III secretion system protein SpaQ |
NC_021820 (Salmonella enterica 08-1736) |
1e-04 |
41 |
|
needle complex export protein |
NC_016856 (Salmonella enterica 14028S) |
1e-04 |
41 |
|
virulence associated secretory protein |
NC_011274 (Salmonella enterica 287/91) |
1e-04 |
41 |
|
secretory protein (associated with virulence) |
NC_022241 (Salmonella enterica 3114) |
1e-04 |
41 |
|
type III secretion system protein SpaQ |
NC_021810 (Salmonella enterica 41578) |
1e-04 |
41 |
|
type III secretion system secretory apparatus |
NC_017046 (Salmonella enterica 798) |
1e-04 |
41 |
|
virulence secretory protein |
NC_011147 (Salmonella enterica AKU12601) |
1e-04 |
41 |
|
secretory protein (associated with virulence) |
NC_006511 (Salmonella enterica ATCC 9150) |
1e-04 |
41 |
|
surface presentation of antigens, secretory proteins |
NC_017623 (Salmonella enterica B182) |
1e-04 |
41 |
|
secretory protein |
NC_022221 (Salmonella enterica CDC1983-67) |
1e-04 |
41 |
|
type III secretion system protein SpaQ |
NC_021844 (Salmonella enterica CFSAN000189) |
1e-04 |
41 |
|
type III secretion system protein SpaQ |
NC_021814 (Salmonella enterica CFSAN001921) |
1e-04 |
41 |
|
type III secretion system protein SpaQ |
NC_020307 (Salmonella enterica CFSAN001992) |
1e-04 |
41 |
|
type III secretion system protein SpaQ |
NC_021818 (Salmonella enterica CFSAN002050) |
1e-04 |
41 |
|
type III secretion system protein SpaQ |
NC_021812 (Salmonella enterica CFSAN002069) |
1e-04 |
41 |
|
secretory protein (associated with virulence) |
NC_003198 (Salmonella enterica CT18) |
1e-04 |
41 |
|
hypothetical protein |
NC_011205 (Salmonella enterica CT_02021853) |
1e-04 |
41 |
|
protein EpaQ |
NC_011094 (Salmonella enterica CVM19633) |
1e-04 |
41 |
|
secretory protein (associated with virulence) |
NC_016854 (Salmonella enterica D23580) |
1e-04 |
41 |
|
needle complex export protein |
NC_003197 (Salmonella enterica LT2) |
1e-04 |
41 |
|
Surface presentation of antigens protein SpaQ |
NC_016832 (Salmonella enterica P-stx-12) |
1e-04 |
41 |
|
secretory protein |
NC_011294 (Salmonella enterica P125109) |
1e-04 |
41 |
|
virulence associated secretory protein |
NC_012125 (Salmonella enterica RKS4594) |
1e-04 |
41 |
|
secretory protein (associated with virulence) |
NC_016831 (Salmonella enterica RKS5078) |
1e-04 |
41 |
|
hypothetical protein |
NC_010067 (Salmonella enterica RSK2980) |
1e-04 |
41 |
|
type III secretion system protein SpaQ |
NC_021984 (Salmonella enterica S06004) |
1e-04 |
41 |
|
surface presentation of antigens; secretory proteins |
NC_006905 (Salmonella enterica SC-B67) |
1e-04 |
41 |
|
hypothetical protein |
NC_010102 (Salmonella enterica SGSC4150; SPB7) |
1e-04 |
41 |
|
type III secretion system secretory apparatus |
NC_016810 (Salmonella enterica SL1344) |
1e-04 |
41 |
|
hypothetical protein |
NC_011080 (Salmonella enterica SL254) |
1e-04 |
41 |
|
secretory protein EpaQ |
NC_011083 (Salmonella enterica SL476) |
1e-04 |
41 |
|
protein EpaQ |
NC_011149 (Salmonella enterica SL483) |
1e-04 |
41 |
|
Surface presentation of antigens protein SpaQ |
NC_016857 (Salmonella enterica ST4/74) |
1e-04 |
41 |
|
protein EpaQ |
NC_016860 (Salmonella enterica T000240) |
1e-04 |
41 |
|
virulence-associated secretory protein |
NC_004631 (Salmonella enterica Ty2) |
1e-04 |
41 |
|
EpaQ |
NC_021176 (Salmonella enterica Ty21a) |
1e-04 |
41 |
|
type III secretion system protein SpaQ |
NC_021151 (Salmonella enterica U288) |
1e-04 |
41 |
|
needle complex export protein |
NC_016863 (Salmonella enterica UK-1) |
1e-04 |
41 |
|
Surface presentation of antigens protein SpaQ |
NC_021902 (Salmonella enterica USMARC-S3124.1) |
1e-04 |
41 |
|
flagellar biosynthesis protein |
NC_006156 (Borrelia garinii PBi) |
3e-04 |
44 |
|
type III secretion apparatus |
NC_007712 (Sodalis glossinidius morsitans) |
6e-04 |
49 |
|
Type III secretion inner membrane protein |
NC_020418 (Morganella morganii KT) |
6e-04 |
42 |
|
flagellar biosynthetic protein FliQ |
NC_010673 (Borrelia hermsii DAH) |
0.001 |
44 |
|
flagellar biosynthetic protein FliQ |
NC_015707 (Thermotoga thermarum DSM 5069) |
0.002 |
43 |
|
flagellar biosynthetic protein fliQ |
NC_014483 (Paenibacillus polymyxa E681) |
0.002 |
42 |
|
flagellar biosynthetic protein fliQ |
NC_017542 (Paenibacillus polymyxa M1) |
0.002 |
42 |
|
flagellar biosynthetic protein fliq |
NC_014622 (Paenibacillus polymyxa SC2) |
0.002 |
42 |
|
hypothetical protein |
NC_020453 (Bradyrhizobium oligotrophicum S58) |
0.004 |
50 |
|
flagellar biosynthetic protein FliQ |
NC_016641 (Paenibacillus terrae HPL-003) |
0.007 |
42 |
|
flagellar biosynthetic protein FliQ |
NC_015573 (Desulfotomaculum kuznetsovii DSM 6115) |
0.007 |
41 |
|
flagellar biosynthesis protein FliQ |
NC_007925 (Rhodopseudomonas palustris BisB18) |
4.5 |
42 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='U25812' AND ph.id_pai_orf='4' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc