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PAthogenisity Island DataBase (PAI DB)

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Homologs of cpfrc_00025 gene of NC_014329_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) Cp1002_0023c
( YP_005680302.1 )

hypothetical protein

NC_017300
(Corynebacterium pseudotuberculosis 1002)

1e-16

100

2) Cp3995_0021
( YP_005122148.1 )

hypothetical protein

NC_016781
(Corynebacterium pseudotuberculosis 3/99-5)

1e-16

100

3) CpC231_0021c
( YP_005682392.1 )

hypothetical protein

NC_017301
(Corynebacterium pseudotuberculosis C231)

1e-16

100

4) cpfrc_00025
( YP_003782425.1 )

hypothetical protein

NC_014329
(Corynebacterium pseudotuberculosis FRC41)

1e-16

100

5) Cp267_0027
( YP_005842861.1 )

hypothetical protein

NC_017462
(Corynebacterium pseudotuberculosis 267)

6e-16

• Sequence Alignments

1) Cp1002_0023c in NC_017300


> NC_014329_P1|4|G4|300857442|YP_003782425.1|Corynebacterium_pseudotuberculosis_FRC41|-|1077..1223|-|cpfrc_00025|hypothetical 
protein
Length=48

 Score = 79.7 bits (283),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 48/48 (100%), Positives = 48/48 (100%), Gaps = 0/48 (0%)

Query  1   MRTRHLHTDEQLAAALGTGVDKLSALRAAFLRVRGGSSSYADLPLMHP  48
           MRTRHLHTDEQLAAALGTGVDKLSALRAAFLRVRGGSSSYADLPLMHP
Sbjct  1   MRTRHLHTDEQLAAALGTGVDKLSALRAAFLRVRGGSSSYADLPLMHP  48

2) Cp3995_0021 in NC_016781


> NC_014329_P1|4|G4|300857442|YP_003782425.1|Corynebacterium_pseudotuberculosis_FRC41|-|1077..1223|-|cpfrc_00025|hypothetical 
protein
Length=48

 Score = 79.7 bits (283),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 48/48 (100%), Positives = 48/48 (100%), Gaps = 0/48 (0%)

Query  1   MRTRHLHTDEQLAAALGTGVDKLSALRAAFLRVRGGSSSYADLPLMHP  48
           MRTRHLHTDEQLAAALGTGVDKLSALRAAFLRVRGGSSSYADLPLMHP
Sbjct  1   MRTRHLHTDEQLAAALGTGVDKLSALRAAFLRVRGGSSSYADLPLMHP  48

3) CpC231_0021c in NC_017301


> NC_014329_P1|4|G4|300857442|YP_003782425.1|Corynebacterium_pseudotuberculosis_FRC41|-|1077..1223|-|cpfrc_00025|hypothetical 
protein
Length=48

 Score = 79.7 bits (283),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 48/48 (100%), Positives = 48/48 (100%), Gaps = 0/48 (0%)

Query  1   MRTRHLHTDEQLAAALGTGVDKLSALRAAFLRVRGGSSSYADLPLMHP  48
           MRTRHLHTDEQLAAALGTGVDKLSALRAAFLRVRGGSSSYADLPLMHP
Sbjct  1   MRTRHLHTDEQLAAALGTGVDKLSALRAAFLRVRGGSSSYADLPLMHP  48

4) cpfrc_00025 in NC_014329


> NC_014329_P1|4|G4|300857442|YP_003782425.1|Corynebacterium_pseudotuberculosis_FRC41|-|1077..1223|-|cpfrc_00025|hypothetical 
protein
Length=48

 Score = 79.7 bits (283),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 48/48 (100%), Positives = 48/48 (100%), Gaps = 0/48 (0%)

Query  1   MRTRHLHTDEQLAAALGTGVDKLSALRAAFLRVRGGSSSYADLPLMHP  48
           MRTRHLHTDEQLAAALGTGVDKLSALRAAFLRVRGGSSSYADLPLMHP
Sbjct  1   MRTRHLHTDEQLAAALGTGVDKLSALRAAFLRVRGGSSSYADLPLMHP  48

5) Cp267_0027 in NC_017462


> NC_014329_P1|4|G4|300857442|YP_003782425.1|Corynebacterium_pseudotuberculosis_FRC41|-|1077..1223|-|cpfrc_00025|hypothetical 
protein
Length=48

 Score = 77.6 bits (275),  Expect = 6e-16, Method: Compositional matrix adjust.
 Identities = 47/48 (98%), Positives = 47/48 (98%), Gaps = 0/48 (0%)

Query  1   MRTRHLHTDEQLAAALGTGVDKLSALRAAFLPVRGGSSSYADLPLMHP  48
           MRTRHLHTDEQLAAALGTGVDKLSALRAAFL VRGGSSSYADLPLMHP
Sbjct  1   MRTRHLHTDEQLAAALGTGVDKLSALRAAFLRVRGGSSSYADLPLMHP  48