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Homologs of ECO111_3720 gene of NC_013364_P1

DNA-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) EC042_pAA156
( - )

NC_017627
(Escherichia coli 042)

e-173

99.7

2) p1ECUMN_0017
( - )

NC_011749
(Escherichia coli UMN026)

e-172

95.7

3) EC042_pAA006
( - )

NC_017627
(Escherichia coli 042)

e-171

96.3

4) unnamed
( - )

NC_013353
(Escherichia coli 12009)

e-147

94.4

5) unnamed
( - )

NC_013353
(Escherichia coli 12009)

e-147

94.4

6) ECO103_3579
( - )

NC_013353
(Escherichia coli 12009)

e-147

94.4

7) ECO103_4899
( - )

NC_013353
(Escherichia coli 12009)

e-147

94.4

8) EC042_4578
( - )

NC_017626
(Escherichia coli 042)

e-131

9) unnamed
( - )

NC_007608
(Shigella boydii Sb227)

e-127

95.1

10) ECO26_p1-48
( - )

NC_013369
(Escherichia coli 11368)

e-123

97.1

11) ECO111_0804
( - )

NC_013364
(Escherichia coli 11128)

e-123

97.1

• Sequence Alignments

1) EC042_pAA156 in NC_017627


>NC_013364_P1|4|G2|260869658|YP_003236060.1|Escherichia_coli_O111:H-_str._11128|+|1977..2303|-|ECO111_3720|putative 
          Length = 327

 Score = 605 bits (1562), Expect = e-173
 Identities = 308/309 (100%)
 Strand = Plus / Plus

Query: 1   ttttcccccgaagtccgtcagcgggcgattcgtatggttctggaaagtcaggatgaatat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19  ttttcccccgaagtccgtcagcgggcgattcgtatggttctggaaagtcaggatgaatat 78

Query: 61  gactcacagtgggcggcaatttgttccattgccccaaagattggctgtacgccggagact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79  gactcacagtgggcggcaatttgttccattgccccaaagattggctgtacgccggagact 138

Query: 121 ctgcgtgtctgggttcgccagcatgagcgggataccgggggcggtgatggtgggctcacc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 ctgcgtgtctgggttcgccagcatgagcgggataccgggggcggtgatggtgggctcacc 198

Query: 181 agcgctgaacgtcagcgtctgaaagagctggaacgtgaaaatcgtgaactgcgccgcagt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 agcgctgaacgtcagcgtctgaaagagctggaacgtgaaaatcgtgaactgcgccgcagt 258

Query: 241 aacgatattcttcgccaggcttccgcttattttgcgaaggcggagttcgaccgcctctgg 300
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aacgatatccttcgccaggcttccgcttattttgcgaaggcggagttcgaccgcctctgg 318

Query: 301 aaaaaatga 309
           |||||||||
Sbjct: 319 aaaaaatga 327

2) p1ECUMN_0017 in NC_011749


>NC_013364_P1|4|G2|260869658|YP_003236060.1|Escherichia_coli_O111:H-_str._11128|+|1977..2303|-|ECO111_3720|putative 
          Length = 327

 Score = 603 bits (1555), Expect = e-172
 Identities = 313/327 (96%)
 Strand = Plus / Plus

Query: 1   atgactaaaaatactcgtttttcccccgaagtccgtcaacgggcagtccgtatggttctg 60
           |||||||||||||||||||||||||||||||||||||| |||||  | ||||||||||||
Sbjct: 1   atgactaaaaatactcgtttttcccccgaagtccgtcagcgggcgattcgtatggttctg 60

Query: 61  gaaagtcagggcgaatatgactcacaatgggcgacaatttgttccattgccccaaagatt 120
           ||||||||||  |||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 61  gaaagtcaggatgaatatgactcacagtgggcggcaatttgttccattgccccaaagatt 120

Query: 121 ggctgtacaccggagactctgcgtgtctgggtacgccagcatgagcgggataccggaggc 180
           |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 121 ggctgtacgccggagactctgcgtgtctgggttcgccagcatgagcgggataccgggggc 180

Query: 181 ggtgatggcgggctcaccaccgctgaacgtcagcgtctgaaagagctggaacgtgaaaat 240
           |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggtgatggtgggctcaccagcgctgaacgtcagcgtctgaaagagctggaacgtgaaaat 240

Query: 241 cgtgaactgcgccgcagtaacgatatccttcgccaggcttccgcttattttgcgaaggcg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgtgaactgcgccgcagtaacgatatccttcgccaggcttccgcttattttgcgaaggcg 300

Query: 301 gagttcgaccgcctctggaaaaagtga 327
           ||||||||||||||||||||||| |||
Sbjct: 301 gagttcgaccgcctctggaaaaaatga 327

3) EC042_pAA006 in NC_017627


>NC_013364_P1|4|G2|260869658|YP_003236060.1|Escherichia_coli_O111:H-_str._11128|+|1977..2303|-|ECO111_3720|putative 
          Length = 327

 Score = 597 bits (1541), Expect = e-171
 Identities = 314/327 (96%)
 Strand = Plus / Plus

Query: 1   atgactaaaaatactcgtttt-cccccgaagtccgtcagagggcgattcgtatggttctg 59
           ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 1   atgactaaaaatactcgtttttcccccgaagtccgtcagcgggcgattcgtatggttctg 60

Query: 60  gaaagtcagggcgaatatgactcacaatgggcggtaatttgttccattgccccaaagatt 119
           ||||||||||  |||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 61  gaaagtcaggatgaatatgactcacagtgggcggcaatttgttccattgccccaaagatt 120

Query: 120 ggctgtacaccggagactctgcgtgtctgggttcgccagcatgagcgggataccgggggc 179
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggctgtacgccggagactctgcgtgtctgggttcgccagcatgagcgggataccgggggc 180

Query: 180 ggtgatggcgggctcaccactgctgaacgtcagcgtctgaaagagctggagcgtgaaaat 239
           |||||||| ||||||||||  ||||||||||||||||||||||||||||| |||||||||
Sbjct: 181 ggtgatggtgggctcaccagcgctgaacgtcagcgtctgaaagagctggaacgtgaaaat 240

Query: 240 cgtgaactgcgccgcagtaacgatatccttcgccaggcttccgcttattttgcgaaggcg 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgtgaactgcgccgcagtaacgatatccttcgccaggcttccgcttattttgcgaaggcg 300

Query: 300 aggttcgaccgcctctggaaaaaatga 326
             |||||||||||||||||||||||||
Sbjct: 301 gagttcgaccgcctctggaaaaaatga 327

4) unnamed in NC_013353


>NC_013364_P1|4|G2|260869658|YP_003236060.1|Escherichia_coli_O111:H-_str._11128|+|1977..2303|-|ECO111_3720|putative 
          Length = 327

 Score = 517 bits (1333), Expect = e-147
 Identities = 272/288 (94%)
 Strand = Plus / Plus

Query: 55  atgactaaaaatacacgtttttcccccgaagtccgtcaacgggcagttcgtatggttctg 114
           |||||||||||||| ||||||||||||||||||||||| |||||  ||||||||||||||
Sbjct: 1   atgactaaaaatactcgtttttcccccgaagtccgtcagcgggcgattcgtatggttctg 60

Query: 115 gaaagtcagggcgaatatgactcacaatgggcggcaatttgttccattaccccaaagatt 174
           ||||||||||  |||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 61  gaaagtcaggatgaatatgactcacagtgggcggcaatttgttccattgccccaaagatt 120

Query: 175 ggctgtacgccggagactctgcgtgtctgggtacgccagcatgagcgggataccggaggc 234
           |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 121 ggctgtacgccggagactctgcgtgtctgggttcgccagcatgagcgggataccgggggc 180

Query: 235 ggtgatggtgggctcaccaccactgaacgtcagcctctgaaagagctggagcgtaaaaat 294
           ||||||||||||||||||| | |||||||||||| ||||||||||||||| ||| |||||
Sbjct: 181 ggtgatggtgggctcaccagcgctgaacgtcagcgtctgaaagagctggaacgtgaaaat 240

Query: 295 cgtgaactgcgccgcagtaacgatatccttcgccagacttccgcttat 342
           |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 241 cgtgaactgcgccgcagtaacgatatccttcgccaggcttccgcttat 288

5) ECO103_3579 in NC_013353


>NC_013364_P1|4|G2|260869658|YP_003236060.1|Escherichia_coli_O111:H-_str._11128|+|1977..2303|-|ECO111_3720|putative 
          Length = 327

 Score = 517 bits (1333), Expect = e-147
 Identities = 272/288 (94%)
 Strand = Plus / Plus

Query: 1   atgactaaaaatacacgtttttcccccgaagtccgtcaacgggcagttcgtatggttctg 60
           |||||||||||||| ||||||||||||||||||||||| |||||  ||||||||||||||
Sbjct: 1   atgactaaaaatactcgtttttcccccgaagtccgtcagcgggcgattcgtatggttctg 60

Query: 61  gaaagtcagggcgaatatgactcacaatgggcggcaatttgttccattaccccaaagatt 120
           ||||||||||  |||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 61  gaaagtcaggatgaatatgactcacagtgggcggcaatttgttccattgccccaaagatt 120

Query: 121 ggctgtacgccggagactctgcgtgtctgggtacgccagcatgagcgggataccggaggc 180
           |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 121 ggctgtacgccggagactctgcgtgtctgggttcgccagcatgagcgggataccgggggc 180

Query: 181 ggtgatggtgggctcaccaccactgaacgtcagcctctgaaagagctggagcgtaaaaat 240
           ||||||||||||||||||| | |||||||||||| ||||||||||||||| ||| |||||
Sbjct: 181 ggtgatggtgggctcaccagcgctgaacgtcagcgtctgaaagagctggaacgtgaaaat 240

Query: 241 cgtgaactgcgccgcagtaacgatatccttcgccagacttccgcttat 288
           |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 241 cgtgaactgcgccgcagtaacgatatccttcgccaggcttccgcttat 288

6) ECO103_4899 in NC_013353


>NC_013364_P1|4|G2|260869658|YP_003236060.1|Escherichia_coli_O111:H-_str._11128|+|1977..2303|-|ECO111_3720|putative 
          Length = 327

 Score = 517 bits (1333), Expect = e-147
 Identities = 272/288 (94%)
 Strand = Plus / Plus

Query: 1   atgactaaaaatacacgtttttcccccgaagtccgtcaacgggcagttcgtatggttctg 60
           |||||||||||||| ||||||||||||||||||||||| |||||  ||||||||||||||
Sbjct: 1   atgactaaaaatactcgtttttcccccgaagtccgtcagcgggcgattcgtatggttctg 60

Query: 61  gaaagtcagggcgaatatgactcacaatgggcggcaatttgttccattaccccaaagatt 120
           ||||||||||  |||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 61  gaaagtcaggatgaatatgactcacagtgggcggcaatttgttccattgccccaaagatt 120

Query: 121 ggctgtacgccggagactctgcgtgtctgggtacgccagcatgagcgggataccggaggc 180
           |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 121 ggctgtacgccggagactctgcgtgtctgggttcgccagcatgagcgggataccgggggc 180

Query: 181 ggtgatggtgggctcaccaccactgaacgtcagcctctgaaagagctggagcgtaaaaat 240
           ||||||||||||||||||| | |||||||||||| ||||||||||||||| ||| |||||
Sbjct: 181 ggtgatggtgggctcaccagcgctgaacgtcagcgtctgaaagagctggaacgtgaaaat 240

Query: 241 cgtgaactgcgccgcagtaacgatatccttcgccagacttccgcttat 288
           |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 241 cgtgaactgcgccgcagtaacgatatccttcgccaggcttccgcttat 288

7) unnamed in NC_013353


>NC_013364_P1|4|G2|260869658|YP_003236060.1|Escherichia_coli_O111:H-_str._11128|+|1977..2303|-|ECO111_3720|putative 
          Length = 327

 Score = 517 bits (1333), Expect = e-147
 Identities = 272/288 (94%)
 Strand = Plus / Plus

Query: 55  atgactaaaaatacacgtttttcccccgaagtccgtcaacgggcagttcgtatggttctg 114
           |||||||||||||| ||||||||||||||||||||||| |||||  ||||||||||||||
Sbjct: 1   atgactaaaaatactcgtttttcccccgaagtccgtcagcgggcgattcgtatggttctg 60

Query: 115 gaaagtcagggcgaatatgactcacaatgggcggcaatttgttccattaccccaaagatt 174
           ||||||||||  |||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 61  gaaagtcaggatgaatatgactcacagtgggcggcaatttgttccattgccccaaagatt 120

Query: 175 ggctgtacgccggagactctgcgtgtctgggtacgccagcatgagcgggataccggaggc 234
           |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 121 ggctgtacgccggagactctgcgtgtctgggttcgccagcatgagcgggataccgggggc 180

Query: 235 ggtgatggtgggctcaccaccactgaacgtcagcctctgaaagagctggagcgtaaaaat 294
           ||||||||||||||||||| | |||||||||||| ||||||||||||||| ||| |||||
Sbjct: 181 ggtgatggtgggctcaccagcgctgaacgtcagcgtctgaaagagctggaacgtgaaaat 240

Query: 295 cgtgaactgcgccgcagtaacgatatccttcgccagacttccgcttat 342
           |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 241 cgtgaactgcgccgcagtaacgatatccttcgccaggcttccgcttat 288

8) EC042_4578 in NC_017626


>NC_013364_P1|4|G2|260869658|YP_003236060.1|Escherichia_coli_O111:H-_str._11128|+|1977..2303|-|ECO111_3720|putative 
          Length = 327

 Score = 467 bits (1204), Expect = e-131
 Identities = 242/252 (96%)
 Strand = Plus / Plus

Query: 72  gaatatgactcacaatgggcggtagtttgttccattgccccaaagattggctgtacgcca 131
           |||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||| 
Sbjct: 73  gaatatgactcacagtgggcggcaatttgttccattgccccaaagattggctgtacgccg 132

Query: 132 gagaccctgcgtgtctgggttcgccagcatgagcgggataccaggggcggtgatggaggg 191
           ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 133 gagactctgcgtgtctgggttcgccagcatgagcgggataccgggggcggtgatggtggg 192

Query: 192 ctcaccaccgctgaacgtcagcgtctgaaagagctggagcgtgaaaatcgtgaactgcgc 251
           ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 193 ctcaccagcgctgaacgtcagcgtctgaaagagctggaacgtgaaaatcgtgaactgcgc 252

Query: 252 cgcagtagcgatatccttcgccaggcttccgcttattttgcgaaggcggagttcgaccgc 311
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cgcagtaacgatatccttcgccaggcttccgcttattttgcgaaggcggagttcgaccgc 312

Query: 312 ctctggaaaaaa 323
           ||||||||||||
Sbjct: 313 ctctggaaaaaa 324


 Score = 116 bits (298), Expect = 5e-26
 Identities = 64/70 (91%)
 Strand = Plus / Plus

Query: 1  atgactaaaaatactcgtttttcccccgaagttcgtcatagggtgatacgtatagttctg 60
          |||||||||||||||||||||||||||||||| |||||  ||| ||| ||||| ||||||
Sbjct: 1  atgactaaaaatactcgtttttcccccgaagtccgtcagcgggcgattcgtatggttctg 60

Query: 61 gaaagtcagg 70
          ||||||||||
Sbjct: 61 gaaagtcagg 70

9) unnamed in NC_007608


>NC_013364_P1|4|G2|260869658|YP_003236060.1|Escherichia_coli_O111:H-_str._11128|+|1977..2303|-|ECO111_3720|putative 
          Length = 327

 Score = 451 bits (1163), Expect = e-127
 Identities = 235/247 (95%)
 Strand = Plus / Plus

Query: 55  atgactaaaaatactcgtttttcccccgaagtccgtcaacgggcagtccgtatggttctg 114
           |||||||||||||||||||||||||||||||||||||| |||||  | ||||||||||||
Sbjct: 1   atgactaaaaatactcgtttttcccccgaagtccgtcagcgggcgattcgtatggttctg 60

Query: 115 gaaagtcagggcgaatatgactcacaatgggcgacaatttgttccattgctccaaagatt 174
           ||||||||||  |||||||||||||| |||||| |||||||||||||||| |||||||||
Sbjct: 61  gaaagtcaggatgaatatgactcacagtgggcggcaatttgttccattgccccaaagatt 120

Query: 175 ggctgtacgccggagactctgcgtgtctgggttcgccagcatgagcgggataccgggggc 234
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggctgtacgccggagactctgcgtgtctgggttcgccagcatgagcgggataccgggggc 180

Query: 235 ggtgatggagggctcaccaccgctgaacgtcagcgtctgaaagagctggagcgtgaaaat 294
           |||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 181 ggtgatggtgggctcaccagcgctgaacgtcagcgtctgaaagagctggaacgtgaaaat 240

Query: 295 cgtgaac 301
           |||||||
Sbjct: 241 cgtgaac 247

10) ECO26_p1-48 in NC_013369


>NC_013364_P1|4|G2|260869658|YP_003236060.1|Escherichia_coli_O111:H-_str._11128|+|1977..2303|-|ECO111_3720|putative 
          Length = 327

 Score = 438 bits (1131), Expect = e-123
 Identities = 232/240 (97%)
 Strand = Plus / Plus

Query: 2   tgggcggcaatttgttccattgccc-aaagattggctgtacaccggagactctgcgtgtc 60
           ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 88  tgggcggcaatttgttccattgccccaaagattggctgtacgccggagactctgcgtgtc 147

Query: 61  tggggacgccagcatgagcgggataccgggagcggtgatggtgggctcaccagcgctgaa 120
           ||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 148 tgggttcgccagcatgagcgggataccgggggcggtgatggtgggctcaccagcgctgaa 207

Query: 121 cgtcagcgtctgaaagagctggaacgtgaaaaccgtgaactgcgccgcagtaacgatatc 180
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 208 cgtcagcgtctgaaagagctggaacgtgaaaatcgtgaactgcgccgcagtaacgatatc 267

Query: 181 cttcgccaggcttccgcttattttgcgaaggccgagttcgaccgcctctggaaaaaataa 240
           |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct: 268 cttcgccaggcttccgcttattttgcgaaggcggagttcgaccgcctctggaaaaaatga 327

11) ECO111_0804 in NC_013364


>NC_013364_P1|4|G2|260869658|YP_003236060.1|Escherichia_coli_O111:H-_str._11128|+|1977..2303|-|ECO111_3720|putative 
          Length = 327

 Score = 437 bits (1127), Expect = e-123
 Identities = 232/240 (97%)
 Strand = Plus / Plus

Query: 2   tgggcggcaatttgttccattgccc-aaagattggctgtacaccggagactctgcgtgtc 60
           ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 88  tgggcggcaatttgttccattgccccaaagattggctgtacgccggagactctgcgtgtc 147

Query: 61  tggggacgcctgcatgagagggataccgggagcggtgatggtgggctcaccagcgctgaa 120
           ||||  |||| ||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 148 tgggttcgccagcatgagcgggataccgggggcggtgatggtgggctcaccagcgctgaa 207

Query: 121 cgtcagcgtctgaaagagctggaacgtgaaaaccgtgaactgcgccgcagtaacgatatc 180
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 208 cgtcagcgtctgaaagagctggaacgtgaaaatcgtgaactgcgccgcagtaacgatatc 267

Query: 181 cttcgccaggcttccgcttattttgcgaaggcggagttcgaccgcctctggaaaaaatga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 cttcgccaggcttccgcttattttgcgaaggcggagttcgaccgcctctggaaaaaatga 327