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Homologs of VC0395_A0337 gene of NC_009457_P1

13

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SO_1408
( NP_717028.1 )

helicase

NC_004347
(Shewanella oneidensis MR-1)

0.0

75

2) Ping_2523
( YP_943843.1 )

type III restriction enzyme, res subunit

NC_008709
(Psychromonas ingrahamii 37)

0.0

56

3) GU3_05650
( YP_005091636.1 )

DEAD/DEAH box helicase

NC_016745
(Oceanimonas sp. GK1)

0.0

51

4) MRBBS_1085
( YP_006557436.1 )

helicase-like protein

NC_018268
(Marinobacter sp. BSs20148)

0.0

47

5) MEALZ_1182
( YP_004916466.1 )

DNA/RNA helicase

NC_016112
(Methylomicrobium alcaliphilum 20Z)

0.0

49

6) CAP2UW1_4230
( YP_003169400.1 )

type III restriction protein res subunit

NC_013194
(Candidatus Accumulibacter phosphatis UW-1)

0.0

47

7) ambt_18570
( YP_004469009.1 )

type III restriction protein res subunit

NC_015554
(Alteromonas sp. SN2)

0.0

45

8) Tmz1t_1707
( YP_002355358.1 )

type III restriction protein res subunit

NC_011662
(Thauera sp. MZ1T)

0.0

47

9) I607_00525
( YP_008170175.1 )

type III restriction protein res subunit

NC_021710
(Alteromonas macleodii Ionian Sea U4)

0.0

46

10) I876_00540
( YP_008194538.1 )

type III restriction protein res subunit

NC_021717
(Alteromonas macleodii Ionian Sea U7)

0.0

46

11) I634_00530
( YP_008174258.1 )

type III restriction protein res subunit

NC_021712
(Alteromonas macleodii Ionian Sea U8)

0.0

46

12) AMEC673_00440
( YP_006797171.1 )

type III restriction protein res subunit

NC_018678
(Alteromonas macleodii English Channel 673)

0.0

46

13) hsdR3
( YP_002605199.1 )

protein HsdR3

NC_012108
(Desulfobacterium autotrophicum HRM2)

3e-142

42

• Sequence Alignments

1) VC395_0829 in NC_012582


> NC_009457_P1|4|G4|147675167|YP_001216293.1|Vibrio_cholerae_O395|-|3585..6524|-|VC0395_A0337|DEAD/DEAH 
box helicase
Length=979

 Score = 1550 bits (5884),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 979/979 (100%), Positives = 979/979 (100%), Gaps = 0/979 (0%)

Query  1    MMSDRQSFLYSGHKLSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPLFDA  60
            MMSDRQSFLYSGHKLSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPLFDA
Sbjct  1    MMSDRQSFLYSGHKLSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPLFDA  60

Query  61   VQSGAQVKLLTSDYLSITHPVALRRLMLLTERGAQCRVFECGQHSFHMKSYIFVRCEQGE  120
            VQSGAQVKLLTSDYLSITHPVALRRLMLLTERGAQCRVFECGQHSFHMKSYIFVRCEQGE
Sbjct  61   VQSGAQVKLLTSDYLSITHPVALRRLMLLTERGAQCRVFECGQHSFHMKSYIFVRCEQGE  120

Query  121  ILEGCAWIGSNNISKTALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKD  180
            ILEGCAWIGSNNISKTALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKD
Sbjct  121  ILEGCAWIGSNNISKTALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKD  180

Query  181  LTHTWIDHYLERYQQAKKQHGMPILADSQDEQSEPPAPNAVQVEALTALNATRAQGFSRG  240
            LTHTWIDHYLERYQQAKKQHGMPILADSQDEQSEPPAPNAVQVEALTALNATRAQGFSRG
Sbjct  181  LTHTWIDHYLERYQQAKKQHGMPILADSQDEQSEPPAPNAVQVEALTALNATRAQGFSRG  240

Query  241  LVVLATGMGKTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQ  300
            LVVLATGMGKTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQ
Sbjct  241  LVVLATGMGKTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQ  300

Query  301  NTQAMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLT  360
            NTQAMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLT
Sbjct  301  NTQAMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLT  360

Query  361  ATPERSDQADILSLCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFD  420
            ATPERSDQADILSLCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFD
Sbjct  361  ATPERSDQADILSLCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFD  420

Query  421  PDSLDNALATQRRAEHVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDS  480
            PDSLDNALATQRRAEHVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDS
Sbjct  421  PDSLDNALATQRRAEHVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDS  480

Query  481  KVRRNQALQWLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFlqqlgrglrrS  540
            KVRRNQALQWLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRS
Sbjct  481  KVRRNQALQWLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRS  540

Query  541  IETQKSKLVVIDFIGNHDSFLNRPTTLYNVSHLKDALAKHQQQALPDGCHVTFDITLLNF  600
            IETQKSKLVVIDFIGNHDSFLNRPTTLYNVSHLKDALAKHQQQALPDGCHVTFDITLLNF
Sbjct  541  IETQKSKLVVIDFIGNHDSFLNRPTTLYNVSHLKDALAKHQQQALPDGCHVTFDITLLNF  600

Query  601  WQQLTRKMRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQENDP  660
            WQQLTRKMRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQENDP
Sbjct  601  WQQLTRKMRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQENDP  660

Query  661  ELAEIVTRYGDFLLHGIESTSMSKSFKAIllealleldglRTPPTLATLAECSYTVIARR  720
            ELAEIVTRYGDFLLHGIESTSMSKSFKAILLEALLELDGLRTPPTLATLAECSYTVIARR
Sbjct  661  ELAEIVTRYGDFLLHGIESTSMSKSFKAILLEALLELDGLRTPPTLATLAECSYTVIARR  720

Query  721  PDLMAEDLTENAKQFKAADKDWLNYWRNNPIKAFTNKATKQATWFSIDSQQRFVANFDIR  780
            PDLMAEDLTENAKQFKAADKDWLNYWRNNPIKAFTNKATKQATWFSIDSQQRFVANFDIR
Sbjct  721  PDLMAEDLTENAKQFKAADKDWLNYWRNNPIKAFTNKATKQATWFSIDSQQRFVANFDIR  780

Query  781  EQDLERLHDCIQELVDLRLAEYAQRPKQHKENLIKAKSKAAVISLIPEQKTIGTPIPFYP  840
            EQDLERLHDCIQELVDLRLAEYAQRPKQHKENLIKAKSKAAVISLIPEQKTIGTPIPFYP
Sbjct  781  EQDLERLHDCIQELVDLRLAEYAQRPKQHKENLIKAKSKAAVISLIPEQKTIGTPIPFYP  840

Query  841  ELKIACGHFKRGSEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNGGKNPIQDGDLLLLE  900
            ELKIACGHFKRGSEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNGGKNPIQDGDLLLLE
Sbjct  841  ELKIACGHFKRGSEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNGGKNPIQDGDLLLLE  900

Query  901  WVTPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSYPNMPATDAMK  960
            WVTPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSYPNMPATDAMK
Sbjct  901  WVTPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSYPNMPATDAMK  960

Query  961  TFARLKAVIKNNSQQSQTR  979
            TFARLKAVIKNNSQQSQTR
Sbjct  961  TFARLKAVIKNNSQQSQTR  979

2) VC0395_A0337 in NC_009457


> NC_009457_P1|4|G4|147675167|YP_001216293.1|Vibrio_cholerae_O395|-|3585..6524|-|VC0395_A0337|DEAD/DEAH 
box helicase
Length=979

 Score = 1550 bits (5884),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 979/979 (100%), Positives = 979/979 (100%), Gaps = 0/979 (0%)

Query  1    MMSDRQSFLYSGHKLSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPLFDA  60
            MMSDRQSFLYSGHKLSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPLFDA
Sbjct  1    MMSDRQSFLYSGHKLSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPLFDA  60

Query  61   VQSGAQVKLLTSDYLSITHPVALRRLMLLTERGAQCRVFECGQHSFHMKSYIFVRCEQGE  120
            VQSGAQVKLLTSDYLSITHPVALRRLMLLTERGAQCRVFECGQHSFHMKSYIFVRCEQGE
Sbjct  61   VQSGAQVKLLTSDYLSITHPVALRRLMLLTERGAQCRVFECGQHSFHMKSYIFVRCEQGE  120

Query  121  ILEGCAWIGSNNISKTALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKD  180
            ILEGCAWIGSNNISKTALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKD
Sbjct  121  ILEGCAWIGSNNISKTALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKD  180

Query  181  LTHTWIDHYLERYQQAKKQHGMPILADSQDEQSEPPAPNAVQVEALTALNATRAQGFSRG  240
            LTHTWIDHYLERYQQAKKQHGMPILADSQDEQSEPPAPNAVQVEALTALNATRAQGFSRG
Sbjct  181  LTHTWIDHYLERYQQAKKQHGMPILADSQDEQSEPPAPNAVQVEALTALNATRAQGFSRG  240

Query  241  LVVLATGMGKTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQ  300
            LVVLATGMGKTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQ
Sbjct  241  LVVLATGMGKTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQ  300

Query  301  NTQAMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLT  360
            NTQAMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLT
Sbjct  301  NTQAMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLT  360

Query  361  ATPERSDQADILSLCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFD  420
            ATPERSDQADILSLCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFD
Sbjct  361  ATPERSDQADILSLCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFD  420

Query  421  PDSLDNALATQRRAEHVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDS  480
            PDSLDNALATQRRAEHVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDS
Sbjct  421  PDSLDNALATQRRAEHVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDS  480

Query  481  KVRRNQALQWLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFlqqlgrglrrS  540
            KVRRNQALQWLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRS
Sbjct  481  KVRRNQALQWLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRS  540

Query  541  IETQKSKLVVIDFIGNHDSFLNRPTTLYNVSHLKDALAKHQQQALPDGCHVTFDITLLNF  600
            IETQKSKLVVIDFIGNHDSFLNRPTTLYNVSHLKDALAKHQQQALPDGCHVTFDITLLNF
Sbjct  541  IETQKSKLVVIDFIGNHDSFLNRPTTLYNVSHLKDALAKHQQQALPDGCHVTFDITLLNF  600

Query  601  WQQLTRKMRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQENDP  660
            WQQLTRKMRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQENDP
Sbjct  601  WQQLTRKMRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQENDP  660

Query  661  ELAEIVTRYGDFLLHGIESTSMSKSFKAIllealleldglRTPPTLATLAECSYTVIARR  720
            ELAEIVTRYGDFLLHGIESTSMSKSFKAILLEALLELDGLRTPPTLATLAECSYTVIARR
Sbjct  661  ELAEIVTRYGDFLLHGIESTSMSKSFKAILLEALLELDGLRTPPTLATLAECSYTVIARR  720

Query  721  PDLMAEDLTENAKQFKAADKDWLNYWRNNPIKAFTNKATKQATWFSIDSQQRFVANFDIR  780
            PDLMAEDLTENAKQFKAADKDWLNYWRNNPIKAFTNKATKQATWFSIDSQQRFVANFDIR
Sbjct  721  PDLMAEDLTENAKQFKAADKDWLNYWRNNPIKAFTNKATKQATWFSIDSQQRFVANFDIR  780

Query  781  EQDLERLHDCIQELVDLRLAEYAQRPKQHKENLIKAKSKAAVISLIPEQKTIGTPIPFYP  840
            EQDLERLHDCIQELVDLRLAEYAQRPKQHKENLIKAKSKAAVISLIPEQKTIGTPIPFYP
Sbjct  781  EQDLERLHDCIQELVDLRLAEYAQRPKQHKENLIKAKSKAAVISLIPEQKTIGTPIPFYP  840

Query  841  ELKIACGHFKRGSEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNGGKNPIQDGDLLLLE  900
            ELKIACGHFKRGSEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNGGKNPIQDGDLLLLE
Sbjct  841  ELKIACGHFKRGSEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNGGKNPIQDGDLLLLE  900

Query  901  WVTPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSYPNMPATDAMK  960
            WVTPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSYPNMPATDAMK
Sbjct  901  WVTPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSYPNMPATDAMK  960

Query  961  TFARLKAVIKNNSQQSQTR  979
            TFARLKAVIKNNSQQSQTR
Sbjct  961  TFARLKAVIKNNSQQSQTR  979

3) VCM66_0770 in NC_012578


> NC_009457_P1|4|G4|147675167|YP_001216293.1|Vibrio_cholerae_O395|-|3585..6524|-|VC0395_A0337|DEAD/DEAH 
box helicase
Length=979

 Score = 1549 bits (5881),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 978/979 (99%), Positives = 979/979 (100%), Gaps = 0/979 (0%)

Query  1    MMSDRQSFLYSGHKLSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPLFDA  60
            MMSDRQSFLYSGHKLSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPLFDA
Sbjct  1    MMSDRQSFLYSGHKLSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPLFDA  60

Query  61   VQSGAQVKLLTSDYLSITHPVALRRLMLLTERGAQCRVFECGQHSFHMKSYIFVRCEQGE  120
            VQSGAQVKLLTSDYLSITHPVALRRLMLLTERGAQCRVFECGQHSFHMKSYIFVRCEQGE
Sbjct  61   VQSGAQVKLLTSDYLSITHPVALRRLMLLTERGAQCRVFECGQHSFHMKSYIFVRCEQGE  120

Query  121  ILEGCAWIGSNNISKTALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKD  180
            ILEGCAWIGSNNISKTALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKD
Sbjct  121  ILEGCAWIGSNNISKTALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKD  180

Query  181  LTHTWIDHYLERYQQAKKQHGMPILADSQDEQSEPPAPNAVQVEALTALNATRAQGFSRG  240
            LTHTWIDHYLERYQQAKKQHGMPILADSQDEQSEPPAPNAVQVEALTALNATRAQGFSRG
Sbjct  181  LTHTWIDHYLERYQQAKKQHGMPILADSQDEQSEPPAPNAVQVEALTALNATRAQGFSRG  240

Query  241  LVVLATGMGKTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQ  300
            LVVLATGMGKTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQ
Sbjct  241  LVVLATGMGKTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQ  300

Query  301  NTQAMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLT  360
            NTQAMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLT
Sbjct  301  NTQAMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLT  360

Query  361  ATPERSDQADILSLCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFD  420
            ATPERSDQADILSLCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFD
Sbjct  361  ATPERSDQADILSLCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFD  420

Query  421  PDSLDNALATQRRAEHVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDS  480
            PDSLDNALATQRRAEHVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDS
Sbjct  421  PDSLDNALATQRRAEHVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDS  480

Query  481  KVRRNQALQWLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFlqqlgrglrrS  540
            KVRRNQALQWLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRS
Sbjct  481  KVRRNQALQWLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRS  540

Query  541  IETQKSKLVVIDFIGNHDSFLNRPTTLYNVSHLKDALAKHQQQALPDGCHVTFDITLLNF  600
            IETQKSKLVVIDFIGNHDSFLNRPTTLYNVSHLKDALAKHQQQALPDGCHVTFDITLLNF
Sbjct  541  IETQKSKLVVIDFIGNHDSFLNRPTTLYNVSHLKDALAKHQQQALPDGCHVTFDITLLNF  600

Query  601  WQQLTRKMRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQENDP  660
            WQQLTRKMRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQENDP
Sbjct  601  WQQLTRKMRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQENDP  660

Query  661  ELAEIVTRYGDFLLHGIESTGMSKSFKAIllealleldglRTPPTLATLAECSYTVIARR  720
            ELAEIVTRYGDFLLHGIEST+MSKSFKAILLEALLELDGLRTPPTLATLAECSYTVIARR
Sbjct  661  ELAEIVTRYGDFLLHGIESTSMSKSFKAILLEALLELDGLRTPPTLATLAECSYTVIARR  720

Query  721  PDLMAEDLTENAKQFKAADKDWLNYWRNNPIKAFTNKATKQATWFSIDSQQRFVANFDIR  780
            PDLMAEDLTENAKQFKAADKDWLNYWRNNPIKAFTNKATKQATWFSIDSQQRFVANFDIR
Sbjct  721  PDLMAEDLTENAKQFKAADKDWLNYWRNNPIKAFTNKATKQATWFSIDSQQRFVANFDIR  780

Query  781  EQDLERLHDCIQELVDLRLAEYAQRPKQHKENLIKAKSKAAVISLIPEQKTIGTPIPFYP  840
            EQDLERLHDCIQELVDLRLAEYAQRPKQHKENLIKAKSKAAVISLIPEQKTIGTPIPFYP
Sbjct  781  EQDLERLHDCIQELVDLRLAEYAQRPKQHKENLIKAKSKAAVISLIPEQKTIGTPIPFYP  840

Query  841  ELKIACGHFKRGSEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNGGKNPIQDGDLLLLE  900
            ELKIACGHFKRGSEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNGGKNPIQDGDLLLLE
Sbjct  841  ELKIACGHFKRGSEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNGGKNPIQDGDLLLLE  900

Query  901  WVTPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSYPNMPATDAMK  960
            WVTPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSYPNMPATDAMK
Sbjct  901  WVTPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSYPNMPATDAMK  960

Query  961  TFARLKAVIKNNSQQSQTR  979
            TFARLKAVIKNNSQQSQTR
Sbjct  961  TFARLKAVIKNNSQQSQTR  979

4) VC0812 in NC_002505


> NC_009457_P1|4|G4|147675167|YP_001216293.1|Vibrio_cholerae_O395|-|3585..6524|-|VC0395_A0337|DEAD/DEAH 
box helicase
Length=979

 Score = 1549 bits (5881),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 978/979 (99%), Positives = 979/979 (100%), Gaps = 0/979 (0%)

Query  1    MMSDRQSFLYSGHKLSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPLFDA  60
            MMSDRQSFLYSGHKLSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPLFDA
Sbjct  1    MMSDRQSFLYSGHKLSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPLFDA  60

Query  61   VQSGAQVKLLTSDYLSITHPVALRRLMLLTERGAQCRVFECGQHSFHMKSYIFVRCEQGE  120
            VQSGAQVKLLTSDYLSITHPVALRRLMLLTERGAQCRVFECGQHSFHMKSYIFVRCEQGE
Sbjct  61   VQSGAQVKLLTSDYLSITHPVALRRLMLLTERGAQCRVFECGQHSFHMKSYIFVRCEQGE  120

Query  121  ILEGCAWIGSNNISKTALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKD  180
            ILEGCAWIGSNNISKTALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKD
Sbjct  121  ILEGCAWIGSNNISKTALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKD  180

Query  181  LTHTWIDHYLERYQQAKKQHGMPILADSQDEQSEPPAPNAVQVEALTALNATRAQGFSRG  240
            LTHTWIDHYLERYQQAKKQHGMPILADSQDEQSEPPAPNAVQVEALTALNATRAQGFSRG
Sbjct  181  LTHTWIDHYLERYQQAKKQHGMPILADSQDEQSEPPAPNAVQVEALTALNATRAQGFSRG  240

Query  241  LVVLATGMGKTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQ  300
            LVVLATGMGKTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQ
Sbjct  241  LVVLATGMGKTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQ  300

Query  301  NTQAMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLT  360
            NTQAMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLT
Sbjct  301  NTQAMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLT  360

Query  361  ATPERSDQADILSLCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFD  420
            ATPERSDQADILSLCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFD
Sbjct  361  ATPERSDQADILSLCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFD  420

Query  421  PDSLDNALATQRRAEHVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDS  480
            PDSLDNALATQRRAEHVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDS
Sbjct  421  PDSLDNALATQRRAEHVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDS  480

Query  481  KVRRNQALQWLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFlqqlgrglrrS  540
            KVRRNQALQWLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRS
Sbjct  481  KVRRNQALQWLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRS  540

Query  541  IETQKSKLVVIDFIGNHDSFLNRPTTLYNVSHLKDALAKHQQQALPDGCHVTFDITLLNF  600
            IETQKSKLVVIDFIGNHDSFLNRPTTLYNVSHLKDALAKHQQQALPDGCHVTFDITLLNF
Sbjct  541  IETQKSKLVVIDFIGNHDSFLNRPTTLYNVSHLKDALAKHQQQALPDGCHVTFDITLLNF  600

Query  601  WQQLTRKMRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQENDP  660
            WQQLTRKMRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQENDP
Sbjct  601  WQQLTRKMRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQENDP  660

Query  661  ELAEIVTRYGDFLLHGIESTGMSKSFKAIllealleldglRTPPTLATLAECSYTVIARR  720
            ELAEIVTRYGDFLLHGIEST+MSKSFKAILLEALLELDGLRTPPTLATLAECSYTVIARR
Sbjct  661  ELAEIVTRYGDFLLHGIESTSMSKSFKAILLEALLELDGLRTPPTLATLAECSYTVIARR  720

Query  721  PDLMAEDLTENAKQFKAADKDWLNYWRNNPIKAFTNKATKQATWFSIDSQQRFVANFDIR  780
            PDLMAEDLTENAKQFKAADKDWLNYWRNNPIKAFTNKATKQATWFSIDSQQRFVANFDIR
Sbjct  721  PDLMAEDLTENAKQFKAADKDWLNYWRNNPIKAFTNKATKQATWFSIDSQQRFVANFDIR  780

Query  781  EQDLERLHDCIQELVDLRLAEYAQRPKQHKENLIKAKSKAAVISLIPEQKTIGTPIPFYP  840
            EQDLERLHDCIQELVDLRLAEYAQRPKQHKENLIKAKSKAAVISLIPEQKTIGTPIPFYP
Sbjct  781  EQDLERLHDCIQELVDLRLAEYAQRPKQHKENLIKAKSKAAVISLIPEQKTIGTPIPFYP  840

Query  841  ELKIACGHFKRGSEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNGGKNPIQDGDLLLLE  900
            ELKIACGHFKRGSEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNGGKNPIQDGDLLLLE
Sbjct  841  ELKIACGHFKRGSEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNGGKNPIQDGDLLLLE  900

Query  901  WVTPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSYPNMPATDAMK  960
            WVTPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSYPNMPATDAMK
Sbjct  901  WVTPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSYPNMPATDAMK  960

Query  961  TFARLKAVIKNNSQQSQTR  979
            TFARLKAVIKNNSQQSQTR
Sbjct  961  TFARLKAVIKNNSQQSQTR  979

5) O3Y_03775 in NC_016944


> NC_009457_P1|4|G4|147675167|YP_001216293.1|Vibrio_cholerae_O395|-|3585..6524|-|VC0395_A0337|DEAD/DEAH 
box helicase
Length=979

 Score = 1547 bits (5872),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 977/978 (99%), Positives = 978/978 (100%), Gaps = 0/978 (0%)

Query  1    MSDRQSFLYSGHKLSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPLFDAV  60
            MSDRQSFLYSGHKLSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPLFDAV
Sbjct  2    MSDRQSFLYSGHKLSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPLFDAV  61

Query  61   QSGAQVKLLTSDYLSITHPVALRRLMLLTERGAQCRVFECGQHSFHMKSYIFVRCEQGEI  120
            QSGAQVKLLTSDYLSITHPVALRRLMLLTERGAQCRVFECGQHSFHMKSYIFVRCEQGEI
Sbjct  62   QSGAQVKLLTSDYLSITHPVALRRLMLLTERGAQCRVFECGQHSFHMKSYIFVRCEQGEI  121

Query  121  LEGCAWIGSNNISKTALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKDL  180
            LEGCAWIGSNNISKTALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKDL
Sbjct  122  LEGCAWIGSNNISKTALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKDL  181

Query  181  THTWIDHYLERYQQAKKQHGMPILADSQDEQSEPPAPNAVQVEALTALNATRAQGFSRGL  240
            THTWIDHYLERYQQAKKQHGMPILADSQDEQSEPPAPNAVQVEALTALNATRAQGFSRGL
Sbjct  182  THTWIDHYLERYQQAKKQHGMPILADSQDEQSEPPAPNAVQVEALTALNATRAQGFSRGL  241

Query  241  VVLATGMGKTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQN  300
            VVLATGMGKTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQN
Sbjct  242  VVLATGMGKTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQN  301

Query  301  TQAMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLTA  360
            TQAMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLTA
Sbjct  302  TQAMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLTA  361

Query  361  TPERSDQADILSLCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFDP  420
            TPERSDQADILSLCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFDP
Sbjct  362  TPERSDQADILSLCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFDP  421

Query  421  DSLDNALATQRRAEHVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDSK  480
            DSLDNALATQRRAEHVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDSK
Sbjct  422  DSLDNALATQRRAEHVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDSK  481

Query  481  VRRNQALQWLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFlqqlgrglrrSI  540
            VRRNQALQWLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRSI
Sbjct  482  VRRNQALQWLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRSI  541

Query  541  ETQKSKLVVIDFIGNHDSFLNRPTTLYNVSHLKDALAKHQQQALPDGCHVTFDITLLNFW  600
            ETQKSKLVVIDFIGNHDSFLNRPTTLYNVSHLKDALAKHQQQALPDGCHVTFDITLLNFW
Sbjct  542  ETQKSKLVVIDFIGNHDSFLNRPTTLYNVSHLKDALAKHQQQALPDGCHVTFDITLLNFW  601

Query  601  QQLTRKMRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQENDPE  660
            QQLTRKMRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQENDPE
Sbjct  602  QQLTRKMRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQENDPE  661

Query  661  LAEIVTRYGDFLLHGIESTGMSKSFKAIllealleldglRTPPTLATLAECSYTVIARRP  720
            LAEIVTRYGDFLLHGIEST+MSKSFKAILLEALLELDGLRTPPTLATLAECSYTVIARRP
Sbjct  662  LAEIVTRYGDFLLHGIESTSMSKSFKAILLEALLELDGLRTPPTLATLAECSYTVIARRP  721

Query  721  DLMAEDLTENAKQFKAADKDWLNYWRNNPIKAFTNKATKQATWFSIDSQQRFVANFDIRE  780
            DLMAEDLTENAKQFKAADKDWLNYWRNNPIKAFTNKATKQATWFSIDSQQRFVANFDIRE
Sbjct  722  DLMAEDLTENAKQFKAADKDWLNYWRNNPIKAFTNKATKQATWFSIDSQQRFVANFDIRE  781

Query  781  QDLERLHDCIQELVDLRLAEYAQRPKQHKENLIKAKSKAAVISLIPEQKTIGTPIPFYPE  840
            QDLERLHDCIQELVDLRLAEYAQRPKQHKENLIKAKSKAAVISLIPEQKTIGTPIPFYPE
Sbjct  782  QDLERLHDCIQELVDLRLAEYAQRPKQHKENLIKAKSKAAVISLIPEQKTIGTPIPFYPE  841

Query  841  LKIACGHFKRGSEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNGGKNPIQDGDLLLLEW  900
            LKIACGHFKRGSEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNGGKNPIQDGDLLLLEW
Sbjct  842  LKIACGHFKRGSEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNGGKNPIQDGDLLLLEW  901

Query  901  VTPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSYPNMPATDAMKT  960
            VTPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSYPNMPATDAMKT
Sbjct  902  VTPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSYPNMPATDAMKT  961

Query  961  FARLKAVIKNNSQQSQTR  978
            FARLKAVIKNNSQQSQTR
Sbjct  962  FARLKAVIKNNSQQSQTR  979

6) VCD_003515 in NC_012668


> NC_009457_P1|4|G4|147675167|YP_001216293.1|Vibrio_cholerae_O395|-|3585..6524|-|VC0395_A0337|DEAD/DEAH 
box helicase
Length=979

 Score = 1547 bits (5872),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 977/978 (99%), Positives = 978/978 (100%), Gaps = 0/978 (0%)

Query  1    MSDRQSFLYSGHKLSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPLFDAV  60
            MSDRQSFLYSGHKLSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPLFDAV
Sbjct  2    MSDRQSFLYSGHKLSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPLFDAV  61

Query  61   QSGAQVKLLTSDYLSITHPVALRRLMLLTERGAQCRVFECGQHSFHMKSYIFVRCEQGEI  120
            QSGAQVKLLTSDYLSITHPVALRRLMLLTERGAQCRVFECGQHSFHMKSYIFVRCEQGEI
Sbjct  62   QSGAQVKLLTSDYLSITHPVALRRLMLLTERGAQCRVFECGQHSFHMKSYIFVRCEQGEI  121

Query  121  LEGCAWIGSNNISKTALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKDL  180
            LEGCAWIGSNNISKTALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKDL
Sbjct  122  LEGCAWIGSNNISKTALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKDL  181

Query  181  THTWIDHYLERYQQAKKQHGMPILADSQDEQSEPPAPNAVQVEALTALNATRAQGFSRGL  240
            THTWIDHYLERYQQAKKQHGMPILADSQDEQSEPPAPNAVQVEALTALNATRAQGFSRGL
Sbjct  182  THTWIDHYLERYQQAKKQHGMPILADSQDEQSEPPAPNAVQVEALTALNATRAQGFSRGL  241

Query  241  VVLATGMGKTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQN  300
            VVLATGMGKTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQN
Sbjct  242  VVLATGMGKTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQN  301

Query  301  TQAMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLTA  360
            TQAMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLTA
Sbjct  302  TQAMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLTA  361

Query  361  TPERSDQADILSLCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFDP  420
            TPERSDQADILSLCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFDP
Sbjct  362  TPERSDQADILSLCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFDP  421

Query  421  DSLDNALATQRRAEHVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDSK  480
            DSLDNALATQRRAEHVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDSK
Sbjct  422  DSLDNALATQRRAEHVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDSK  481

Query  481  VRRNQALQWLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFlqqlgrglrrSI  540
            VRRNQALQWLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRSI
Sbjct  482  VRRNQALQWLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRSI  541

Query  541  ETQKSKLVVIDFIGNHDSFLNRPTTLYNVSHLKDALAKHQQQALPDGCHVTFDITLLNFW  600
            ETQKSKLVVIDFIGNHDSFLNRPTTLYNVSHLKDALAKHQQQALPDGCHVTFDITLLNFW
Sbjct  542  ETQKSKLVVIDFIGNHDSFLNRPTTLYNVSHLKDALAKHQQQALPDGCHVTFDITLLNFW  601

Query  601  QQLTRKMRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQENDPE  660
            QQLTRKMRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQENDPE
Sbjct  602  QQLTRKMRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQENDPE  661

Query  661  LAEIVTRYGDFLLHGIESTGMSKSFKAIllealleldglRTPPTLATLAECSYTVIARRP  720
            LAEIVTRYGDFLLHGIEST+MSKSFKAILLEALLELDGLRTPPTLATLAECSYTVIARRP
Sbjct  662  LAEIVTRYGDFLLHGIESTSMSKSFKAILLEALLELDGLRTPPTLATLAECSYTVIARRP  721

Query  721  DLMAEDLTENAKQFKAADKDWLNYWRNNPIKAFTNKATKQATWFSIDSQQRFVANFDIRE  780
            DLMAEDLTENAKQFKAADKDWLNYWRNNPIKAFTNKATKQATWFSIDSQQRFVANFDIRE
Sbjct  722  DLMAEDLTENAKQFKAADKDWLNYWRNNPIKAFTNKATKQATWFSIDSQQRFVANFDIRE  781

Query  781  QDLERLHDCIQELVDLRLAEYAQRPKQHKENLIKAKSKAAVISLIPEQKTIGTPIPFYPE  840
            QDLERLHDCIQELVDLRLAEYAQRPKQHKENLIKAKSKAAVISLIPEQKTIGTPIPFYPE
Sbjct  782  QDLERLHDCIQELVDLRLAEYAQRPKQHKENLIKAKSKAAVISLIPEQKTIGTPIPFYPE  841

Query  841  LKIACGHFKRGSEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNGGKNPIQDGDLLLLEW  900
            LKIACGHFKRGSEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNGGKNPIQDGDLLLLEW
Sbjct  842  LKIACGHFKRGSEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNGGKNPIQDGDLLLLEW  901

Query  901  VTPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSYPNMPATDAMKT  960
            VTPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSYPNMPATDAMKT
Sbjct  902  VTPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSYPNMPATDAMKT  961

Query  961  FARLKAVIKNNSQQSQTR  978
            FARLKAVIKNNSQQSQTR
Sbjct  962  FARLKAVIKNNSQQSQTR  979

7) Vch1786_I0318 in NC_016445


> NC_009457_P1|4|G4|147675167|YP_001216293.1|Vibrio_cholerae_O395|-|3585..6524|-|VC0395_A0337|DEAD/DEAH 
box helicase
Length=979

 Score = 1547 bits (5872),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 977/978 (99%), Positives = 978/978 (100%), Gaps = 0/978 (0%)

Query  1    MSDRQSFLYSGHKLSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPLFDAV  60
            MSDRQSFLYSGHKLSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPLFDAV
Sbjct  2    MSDRQSFLYSGHKLSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPLFDAV  61

Query  61   QSGAQVKLLTSDYLSITHPVALRRLMLLTERGAQCRVFECGQHSFHMKSYIFVRCEQGEI  120
            QSGAQVKLLTSDYLSITHPVALRRLMLLTERGAQCRVFECGQHSFHMKSYIFVRCEQGEI
Sbjct  62   QSGAQVKLLTSDYLSITHPVALRRLMLLTERGAQCRVFECGQHSFHMKSYIFVRCEQGEI  121

Query  121  LEGCAWIGSNNISKTALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKDL  180
            LEGCAWIGSNNISKTALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKDL
Sbjct  122  LEGCAWIGSNNISKTALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKDL  181

Query  181  THTWIDHYLERYQQAKKQHGMPILADSQDEQSEPPAPNAVQVEALTALNATRAQGFSRGL  240
            THTWIDHYLERYQQAKKQHGMPILADSQDEQSEPPAPNAVQVEALTALNATRAQGFSRGL
Sbjct  182  THTWIDHYLERYQQAKKQHGMPILADSQDEQSEPPAPNAVQVEALTALNATRAQGFSRGL  241

Query  241  VVLATGMGKTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQN  300
            VVLATGMGKTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQN
Sbjct  242  VVLATGMGKTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQN  301

Query  301  TQAMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLTA  360
            TQAMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLTA
Sbjct  302  TQAMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLTA  361

Query  361  TPERSDQADILSLCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFDP  420
            TPERSDQADILSLCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFDP
Sbjct  362  TPERSDQADILSLCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFDP  421

Query  421  DSLDNALATQRRAEHVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDSK  480
            DSLDNALATQRRAEHVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDSK
Sbjct  422  DSLDNALATQRRAEHVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDSK  481

Query  481  VRRNQALQWLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFlqqlgrglrrSI  540
            VRRNQALQWLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRSI
Sbjct  482  VRRNQALQWLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRSI  541

Query  541  ETQKSKLVVIDFIGNHDSFLNRPTTLYNVSHLKDALAKHQQQALPDGCHVTFDITLLNFW  600
            ETQKSKLVVIDFIGNHDSFLNRPTTLYNVSHLKDALAKHQQQALPDGCHVTFDITLLNFW
Sbjct  542  ETQKSKLVVIDFIGNHDSFLNRPTTLYNVSHLKDALAKHQQQALPDGCHVTFDITLLNFW  601

Query  601  QQLTRKMRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQENDPE  660
            QQLTRKMRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQENDPE
Sbjct  602  QQLTRKMRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQENDPE  661

Query  661  LAEIVTRYGDFLLHGIESTGMSKSFKAIllealleldglRTPPTLATLAECSYTVIARRP  720
            LAEIVTRYGDFLLHGIEST+MSKSFKAILLEALLELDGLRTPPTLATLAECSYTVIARRP
Sbjct  662  LAEIVTRYGDFLLHGIESTSMSKSFKAILLEALLELDGLRTPPTLATLAECSYTVIARRP  721

Query  721  DLMAEDLTENAKQFKAADKDWLNYWRNNPIKAFTNKATKQATWFSIDSQQRFVANFDIRE  780
            DLMAEDLTENAKQFKAADKDWLNYWRNNPIKAFTNKATKQATWFSIDSQQRFVANFDIRE
Sbjct  722  DLMAEDLTENAKQFKAADKDWLNYWRNNPIKAFTNKATKQATWFSIDSQQRFVANFDIRE  781

Query  781  QDLERLHDCIQELVDLRLAEYAQRPKQHKENLIKAKSKAAVISLIPEQKTIGTPIPFYPE  840
            QDLERLHDCIQELVDLRLAEYAQRPKQHKENLIKAKSKAAVISLIPEQKTIGTPIPFYPE
Sbjct  782  QDLERLHDCIQELVDLRLAEYAQRPKQHKENLIKAKSKAAVISLIPEQKTIGTPIPFYPE  841

Query  841  LKIACGHFKRGSEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNGGKNPIQDGDLLLLEW  900
            LKIACGHFKRGSEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNGGKNPIQDGDLLLLEW
Sbjct  842  LKIACGHFKRGSEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNGGKNPIQDGDLLLLEW  901

Query  901  VTPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSYPNMPATDAMKT  960
            VTPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSYPNMPATDAMKT
Sbjct  902  VTPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSYPNMPATDAMKT  961

Query  961  FARLKAVIKNNSQQSQTR  978
            FARLKAVIKNNSQQSQTR
Sbjct  962  FARLKAVIKNNSQQSQTR  979

8) SO_1408 in NC_004347


> NC_009457_P1|4|G4|147675167|YP_001216293.1|Vibrio_cholerae_O395|-|3585..6524|-|VC0395_A0337|DEAD/DEAH 
box helicase
Length=979

 Score = 1192 bits (4521),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 734/987 (75%), Positives = 871/987 (89%), Gaps = 15/987 (1%)

Query  1    MIEQQTSLYSGKKLSYGGANDPLLPRLIQAINHASEIEISVSFIQPSGldllfdplldal  60
            M ++Q+ LYSG KLS GGANDPLLPRL+QAINHA+EIEISVSFIQPSGLDLLFDPL+DA+
Sbjct  2    MSDRQSFLYSGHKLSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPLFDAV  61

Query  61   QSGASLKLLTSDYLCISHPVALRRLMLLAERGAQCKIFVCGQQSFHMKSYIFIRSEQDEI  120
            QSGA +KLLTSDYL I+HPVALRRLMLL+ERGAQC++F CGQ+SFHMKSYIF+R EQ+EI
Sbjct  62   QSGAQVKLLTSDYLSITHPVALRRLMLLTERGAQCRVFECGQHSFHMKSYIFVRCEQGEI  121

Query  121  IEGCAWIGSNNISKTALLHSHEWALRHDFELPLTSPAALEFAHIRKQFEAIFNHTESQVL  180
            +EGCAWIGSNNISKTALL+SHEWALRHDFE P TS+AALEF HIR+QF +IFNHT+S+ L
Sbjct  122  LEGCAWIGSNNISKTALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKDL  181

Query  181  THVWIDSYLSRYQHTKQQRGIAAVSLYEEQEHIEPPTPNAVQMEALAALKASREQGFTRG  240
            TH WID YL RYQ++K+Q+G++ ++   ++E+ EPP+PNAVQ+EAL+AL+A+R QGF+RG
Sbjct  182  THTWIDHYLERYQQAKKQHGMPILAD-SQDEQSEPPAPNAVQVEALTALNATRAQGFSRG  240

Query  241  LVVLATGMGKTWLAAFDTLQTAAKKVLFVAHREEILIQAEKTFNQLVPEAKTGSYNGLNQ  300
            LVVLATGMGKTWLAAFD+LQT + KVLFVAHREEIL+QAEKTF QL+P+AKTG YNG+ Q
Sbjct  241  LVVLATGMGKTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQ  300

Query  301  DEKTDYLFASVATLGKLQHLQRFAADHFDYIVVDEFHHAAAKSYRQLLAYFRPQFLLGLT  360
            + ++  LFASVAT+GK +HLQRFAADHFDYIVVDEFHHAAA+SYR+LL+YF+P+FLLGLT
Sbjct  301  NTQAMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLT  360

Query  361  ATPERSDQADILSLCDNNLVFERNLVHGIDGKLLVPFDYHGIYDQAVNYQDIPWRNGKFD  420
            ATPERSDQADILSLCD+NLVFERNLVHGID K+LVPFDYHGIYDQAVNYQ+IPWRNGKFD
Sbjct  361  ATPERSDQADILSLCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFD  420

Query  421  PDALDNALATQRRATHVLHHWQQSKQSRTLAFCVSKKHADFMAKYFTSKGINAIAVYSDS  480
            PD+LDNALATQRRA HV +HW+Q KQ+RTLAFCVSKKHADFMA +  SKGI+AIAVYSDS
Sbjct  421  PDSLDNALATQRRAEHVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDS  480

Query  481  KVRRNQALQWLAQGSIEVIFSVDLFNEGTDLPAIDTILMIRPTESKILFlqqlgrglrlS  540
            KVRRNQALQWL  G I+++FSVDLFNEGTDLPAIDTILM+RPTESKILFLQQLGRGLR S
Sbjct  481  KVRRNQALQWLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRS  540

Query  541  HQTQKQKLVVLDFIGNHESFLNRPTTLYNLGSLREVLRNLNQVNALPKGCHVNFDLELIE  600
             +TQK KLVV+DFIGNH+SFLNRPTTLYN++ L++ L + +Q +ALP GCHV FD+ L++
Sbjct  541  IETQKSKLVVIDFIGNHDSFLNRPTTLYNVSHLKDALAK-HQQQALPDGCHVTFDITLLN  599

Query  601  FWQNLVKRLRFSVQEEYQQLANQLAHRPTASEFYHHGVEMNKVRQQAQSWFHLVASQEAE  660
            FWQ+L +++RFSVQ+EYQQLA+QLAHRPTASEF+ HG+E++KVR+QAQSWFHLVASQE +
Sbjct  600  FWQQLTRKMRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQEND  659

Query  661  PCFTDMVTRYGDFLLHGVETTTMTKSFKAIllealleldglRNPPTLAALAERSHAVFCR  720
            P ++++VTRYGDFLLHG+E+T+M+KSFKAILLEALLELDGLR PPTLA+LAE S +V+ R
Sbjct  660  PELAEIVTRYGDFLLHGIESTSMSKSFKAILLEALLELDGLRTPPTLATLAECSYTVIAR  719

Query  721  RPDLMAQELTQAAKQFKAQDKGWLTYWKNNPINAFTKANSKTPPWFQIDAKQRFVATFTI  780
            RPDLMA++LT+ AKQFKA DK+WL YW+NNPI+AFT+  +K + WF ID++QRFVA F I
Sbjct  720  RPDLMAEDLTENAKQFKAADKDWLNYWRNNPIKAFTNKATKQATWFSIDSQQRFVANFDI  779

Query  781  DEADIELLHDWVQELVDLRLAQYVQRPQQKATVntsnastnntrntnttaKPLAQVLPFE  840
             E D+E LHD +QELVDLRLA+Y QRP+Q                    AK+ A V+++ 
Sbjct  780  REQDLERLHDCIQELVDLRLAEYAQRPKQHKE-------------NLIKAKSKAAVISLI  826

Query  841  STPSTEGTLLPFYPELKIACGHFKHGSAQNAEHYCVPSGYGLLDPKRHFVAPASGNSMNG  900
            +   T GT +PFYPELKIACGHFK+GS ++ + Y VP GYGLLDP RHFV+PASGNSMNG
Sbjct  827  PEQKTIGTPIPFYPELKIACGHFKRGSEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNG  886

Query  901  GKNPIQDGDLLLLEWVTPESAGSISNLTMAIETQDDTGDNQYLLRVVRKTAPNQYELHAQ  960
            GKNPIQDGDLLLLEWVTP SAGSISNLTMAIETQD+TGDNQYLLRVVRK APNQYEL+AQ
Sbjct  887  GKNPIQDGDLLLLEWVTPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQ  946

Query  961  NPAYQTMLATDSMKTFARLKAVLESQD  987
            NP+Y  M ATD+MKTFARLKAV+ ++ 
Sbjct  947  NPSYPNMPATDAMKTFARLKAVIKNNS  973

9) Ping_2523 in NC_008709


> NC_009457_P1|4|G4|147675167|YP_001216293.1|Vibrio_cholerae_O395|-|3585..6524|-|VC0395_A0337|DEAD/DEAH 
box helicase
Length=979

 Score =  871 bits (3297),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 535/968 (56%), Positives = 743/968 (77%), Gaps = 22/968 (2%)

Query  14   DAKKLTTGG-DDPLLPKLIHAINHASEIEIAVSFVQCSGLNLLFEPLKDAILNGAILKLL  72
             + KL++GG +DPLLP+L++AINHA+EIEI+VSF+Q SGL+LLF+PL DA+ +GA +KLL
Sbjct  11   SGHKLSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPLFDAVQSGAQVKLL  70

Query  73   TSDYLDITDPVALRELMPLLDRGADIRIYQSDNKQAFHMKSYIFVKTVAEKKEEELIDGC  132
            TSDYL IT+PVALR LM L +RGA+ R+++ ++ ++FHMKSYIFV+      + E+++GC
Sbjct  71   TSDYLSITHPVALRRLMLLTERGAQCRVFECGQ-HSFHMKSYIFVRC----EQGEILEGC  125

Query  133  AFIGSNNISKSALTTGHEWCFRHDYLPPRTSREALEFNYIRSAFNEIFAHPLVHKLDHDW  192
            A IGSNNISK+AL  +HEW +RHD+ PP TS  ALEF  IR  F  IF H     L H W
Sbjct  126  AWIGSNNISKTALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKDLTHTW  185

Query  193  ISAYLRR---RKMMQFVSVDPGSPPEYIEPATPNHIQIEALTALVKSREIGFKRGLVVLA  249
            I  YL R    K  + +++ ++S  E  EP++PN +Q+EALTAL  +R  GF RGLVVLA
Sbjct  186  IDHYLERYQQAKKQHGMPILADSQDEQSEPPAPNAVQVEALTALNATRAQGFSRGLVVLA  245

Query  250  TGMGKTWLAAFDVLQLKAKRILFVAHREEILLQAQRTFAQLMPEKSSGFYNAQNRQKGAD  309
            TGMGKTWLAAFD LQ ++ ++LFVAHREEILLQA++TF QL+P+  +G+YN+  ++  A 
Sbjct  246  TGMGKTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQNTQAM  305

Query  310  VLFASVQTIGRENHLQQFSKDHFDYVVVDEFHHASAPVYSNLLAYFNPDFLLGLTATPER  369
            +LFASV TIG++NHLQ+F+ DHFDY+VVDEFHHA+A  Y NLL+YF+P FLLGLTATPER
Sbjct  306  LLFASVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLTATPER  365

Query  370  TDQSDILCLCDNNLVYERNLTQGIDDKILAPFKYYGIWDESVNYQAIPWRNGRFDPESID  429
            +DQ+DIL LCD+NLV+ERNL +GID+KIL PF Y GI D++VNYQ IPWRNG+FDP+S+D
Sbjct  366  SDQADILSLCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFDPDSLD  425

Query  430  NQFATQKRASHILKKWHQFKQQKTLAFCISVKHADYMAESFNNAGIKAVSVHSKSEIRRN  489
            N +ATQ+RA H+ + WHQ KQ +TLAFC+S KHAD+MAE   + GIKA++V S S +RRN
Sbjct  426  NALATQRRAEHVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDSKVRRN  485

Query  490  EALTQLQNGTLEVMFSVDLFNEGTDLPALDTILMLRPSNSKILFlqqlgrg--lrlHKNK  547
            +AL  L++G ++++FSVDLFNEGTDLPA+DTILMLRP++SKILFLQQLGRG    ++ +K
Sbjct  486  QALQWLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRSIETQK  545

Query  548  THLVVLDFIGNHHSFLNKPYALFGSSTIPVLIKKVKEDKLADGCFVNYDIEITQFWKQLA  607
            + LVV+DFIGNH+SFLN+P +L+  S +   + K +++ L+DGC V +DI + +FW+QL+
Sbjct  546  SKLVVIDFIGNHDSFLNRPTTLYNVSHLKDALAKHQQQALPDGCHVTFDITLLNFWQQLT  605

Query  608  KQQRTTAIEDYQNLYEQLGHRPTASEFLNAYGDLNKVNKQHKSWMALVAAQQQEPEFSDL  667
            ++ R +  ++YQ+L +QL+HRPTASEF+    +++KV KQ +SW  LVA+Q+++PE++++
Sbjct  606  RKMRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQENDPELAEI  665

Query  668  IENYGDFLLEAVQATAMAKSFKAILLEAFLRLDGFSNPPTLEKLAKDSKLVFDRYPLLKQ  727
            +  YGDFLL+++++T+M+KSFKAILLEA+L LDG+  PPTL  LA  S  V+ R P L  
Sbjct  666  VTRYGDFLLHGIESTSMSKSFKAILLEALLELDGLRTPPTLATLAECSYTVIARRPDLMA  725

Query  728  SELSKNLQHCQSDSVQWLEYWKKNPIKFSCTVNNKTGKQ--WFKI-KDNRLVVNLDVREQ  784
             +L+ N ++ ++   +WL+YW++NPIK   +  NK+ KQ  WF I  ++R+V N+D+REQ
Sbjct  726  EDLTENAKQFKAADKDWLNYWRNNPIK---AFTNKATKQATWFSIDSQQRFVANFDIREQ  782

Query  785  DKPALHDAVQELLTLRLLQYSQRPNKVSKAAVNQQENN---SLIKREKAI--QLAFYPNL  839
            D   LHD +QEL+ LRL +Y+QRP++     ++ + +    SLI  +K+I   ++FYP+L
Sbjct  783  DLERLHDCIQELVDLRLAEYAQRPKQHKENLIKAKSKAAVISLIPEQKTIGTPIPFYPEL  842

Query  840  KIACGHFKTGDDLEFEYKNAPVGFGHLQADKHFLAKASGNSMDGGKNPVRDGDTLLLEKI  899
            KIACGHFK G + E +    P G+G L++ +HF++ ASGNSM+GGKNP++DGD LLLE +
Sbjct  843  KIACGHFKRGSEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNGGKNPIQDGDLLLLEWV  902

Query  900  TPTSAGSLQGLTVAIEKQDEAGDGQCLLRVVKKTADGRYKLVAKNPDYKTIYADEDMQTF  959
            TP+SAGS+  LT+AIE QDE+GD Q LLRVV+K A  +Y L A+NP Y  + A + M+TF
Sbjct  903  TPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSYPNMPATDAMKTF  962

Query  960  ARLKGVVR  967
            ARLK+V++
Sbjct  963  ARLKAVIK  970

10) VV1_2188 in NC_004459


> NC_009457_P1|4|G4|147675167|YP_001216293.1|Vibrio_cholerae_O395|-|3585..6524|-|VC0395_A0337|DEAD/DEAH 
box helicase
Length=979

 Score =  847 bits (3207),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 526/974 (55%), Positives = 735/974 (76%), Gaps = 34/974 (3%)

Query  12   LLTTGGEDPLLPQLIHAINHATEIEIAVSFIQPSGLDLLLPSIHEAIERKKSRQQALKLR  71
            L + G++DPLLP+L++AINHATEIEI+VSFIQPSGLDLL+ ++ +A+      Q + +++
Sbjct  15   LSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPLFDAV------QSGAQVK  68

Query  72   ILTSDYLHITHPIALRSLIELEGDEIEIKIFETNNRSFHLKSYIFVRSDEARSIYQGAAF  131
            +LTSDYL ITHP+ALR L+ L     + ++FE  ++SFH+KSYIFVR +++  I +G A 
Sbjct  69   LLTSDYLSITHPVALRRLMLLTERGAQCRVFECGQHSFHMKSYIFVRCEQG-EILEGCAW  127

Query  132  VGSNNISKTALTDAHEWCLRLDYQQPDNSLQAAQFHNIRTQFDKLFHHPSAILLTDEWID  191
            +GSNNISKTAL D+HEW LR D++ P+ S  A +F +IR QF  +F+H ++  LT+ WID
Sbjct  128  IGSNNISKTALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKDLTHTWID  187

Query  192  SYIKR----RTPPKLSAVGDTTLLDNEEYSPNSAQLDALQRLSETRQKGNVRGLVVMGTG  247
             Y+ R    +    ++ ++D+   ++E  +PN+ Q++AL  L+ TR +G  RGLVV++TG
Sbjct  188  HYLERYQQAKKQHGMPILADSQDEQSEPPAPNAVQVEALTALNATRAQGFSRGLVVLATG  247

Query  248  MGKTWLSAFDAKQLEAKRVLFVAHREEILTQALMTFAKLWPQKSAGYYHGKSKERNKEML  307
            MGKTWL+AFDA Q ++ +VLFVAHREEIL QA  TF +L P+  +G Y+G +++ +  +L
Sbjct  248  MGKTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQNTQAMLL  307

Query  308  FASVQTLGKAAHLKHFASDHFDYIVVDEFHHASTKTYLNILSYFEPKFLLGLTATPERTD  367
            FASV T+GK  HL++FA+DHFDYIVVDEFHHA++++Y N+L+YF PKFLLGLTATPER+D
Sbjct  308  FASVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLTATPERSD  367

Query  368  QANILSLCHDNLVFERNLVHGINDEILVPFHYYGIWDDSVDYQEIPWRNGKFDPTALDAQ  427
            QA+ILSLC+ NLVFERNLVHGI++ ILVPF+Y GI D++V+YQEIPWRNGKFDP +LD  
Sbjct  368  QADILSLCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFDPDSLDNA  427

Query  428  FATTRRAKHIFKHWQNRQQTRTLAFCVSKKHADFMAQHFNQTFA-DKGLRALSVHSDSSI  486
            +AT RRA H+++HW++++QTRTLAFCVSKKHADFMA+     F   KG++A++V SDS +
Sbjct  428  LATQRRAEHVYQHWHQKKQTRTLAFCVSKKHADFMAE-----FCLSKGIKAIAVYSDSKV  482

Query  487  RRNEALSMLDKGEIQILFSVDLFNEGTDLPSIDTVLMLRPTESNIVFIQQLGRGLRR--H  544
            RRN+AL  LD G I+ILFSVDLFNEGTDLP+IDT+LMLRPTES+I+F+QQLGRGLRR  +
Sbjct  483  RRNQALQWLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRSIE  542

Query  545  TDKSHLVVLDFIGNHRSFLNKKEILGISTSSSLEQLSDKSQTRPELGKGCFTNIDPKIID  604
            T+KS LVV+DFIGNH SFLN+   L     S L +   K Q ++ L  GC   +D  +++
Sbjct  543  TQKSKLVVIDFIGNHDSFLNRPTTL--YNVSHLKDALAKHQQQA-LPDGCHVTFDITLLN  599

Query  605  FWQTLTKQLRYSAQEEFEHLTNHLGHRPRAVEYYRAGYDLAKVNKQHGSWLELVASMDKD  664
            FWQ LT+++R+S Q+E+++L+++L+HRP A E++  G +++KV KQ  SW++LVAS ++D
Sbjct  600  FWQQLTRKMRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQEND  659

Query  665  PELDYLVREHRDFFANAIQKASMTKSFKAILLEAYLELDGFRDAPSIEVLASKSWHVLSR  724
            PEL  +V    DF+ ++I+ +SM+KSFKAILLEA LELDG+R +P++  LA  S  V++R
Sbjct  660  PELAEIVTRYGDFLLHGIESTSMSKSFKAILLEALLELDGLRTPPTLATLAECSYTVIAR  719

Query  725  YPKLKASDLSEINQRLTADSQAWLKYWLSNPINAFVGGNKTKSRVWFKL-ADGKLKADFD  783
             P L A DL+E  +++ A  + WL+YW +NPI+AF   + TK   WF + ++ ++ A+FD
Sbjct  720  RPDLMAEDLTENAKQFKAADKDWLNYWRNNPIKAF-TNKATKQATWFSIDSQQRFVANFD  778

Query  784  VAPLQQQAFHDFVKELVDLQLAQYSDRQPKQTHQTVAQPTTPA-------EAANEGTLLP  836
            +   + + +HD ++ELVDL+LA+Y++R PKQ  + + ++ + A       E    GT +P
Sbjct  779  IREQDLERLHDCIQELVDLRLAEYAQR-PKQHKENLIKAKSKAAVISLIPEQKTIGTPIP  837

Query  837  YYPNLKIACGHFKTGSHEEVEH--IPVDMANLNPQKHFLASASGNSMNGGKTPILDGDLL  894
            +YP+LKIACGHFK GS+ EV+   +P + + L+P +HF+++ASGNSMNGGK PI DGDLL
Sbjct  838  FYPELKIACGHFKRGSEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNGGKNPIQDGDLL  897

Query  895  LLEFVTPISAGSITGNTMAIEIQDSSGENQYLLRVVQKDAQGRYWLKANNPDYELMPAND  954
            LLE VTP SAGSI+  TMAIE QD +G+NQYLLRVV+K A  +Y L+A+NP Y  MPA D
Sbjct  898  LLEWVTPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSYPNMPATD  957

Query  955  SMKTFARLKKVITQ  968
            +MKTFARLK VI +
Sbjct  958  AMKTFARLKAVIKN  971

11) VVMO6_01054 in NC_014965


> NC_009457_P1|4|G4|147675167|YP_001216293.1|Vibrio_cholerae_O395|-|3585..6524|-|VC0395_A0337|DEAD/DEAH 
box helicase
Length=979

 Score =  845 bits (3199),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 526/974 (55%), Positives = 733/974 (76%), Gaps = 34/974 (3%)

Query  12   LLTTGGEDPLLPQLIHAINHATEIEIAVSFIQPSGLDLLLPSIHEAIERKKSRQQALKLR  71
            L + G++DPLLP+L++AINHATEIEI+VSFIQPSGLDLL+ ++ +A+      Q + +++
Sbjct  15   LSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPLFDAV------QSGAQVK  68

Query  72   ILTSDYLHITHPIALRSLIELEGDEIEIKIFETNNRSFHLKSYIFVRSDEARSIYQGAAF  131
            +LTSDYL ITHP+ALR L+ L     + ++FE  ++SFH+KSYIFVR +++  I +G A 
Sbjct  69   LLTSDYLSITHPVALRRLMLLTERGAQCRVFECGQHSFHMKSYIFVRCEQG-EILEGCAW  127

Query  132  VGSNNISKTALTDAHEWCLRLDYQQPDNSLQAAQFHNIRTQFDKLFHHPSAILLTDEWID  191
            +GSNNISKTAL D+HEW LR D++ P+ S  A +F +IR QF  +F+H ++  LT+ WID
Sbjct  128  IGSNNISKTALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKDLTHTWID  187

Query  192  SYIKR----RTPPKLSAVGDTTLLDNEEYSPNSAQLDALQRLSETRQKGNVRGLVVMGTG  247
             Y+ R    +    ++ ++D+   ++E  +PN+ Q++AL  L+ TR +G  RGLVV++TG
Sbjct  188  HYLERYQQAKKQHGMPILADSQDEQSEPPAPNAVQVEALTALNATRAQGFSRGLVVLATG  247

Query  248  MGKTWLSAFDAKQLEAKRVLFVAHREEILTQALMTFAKLWPQKSAGYYHGKSKERNKEML  307
            MGKTWL+AFDA Q ++ +VLFVAHREEIL QA  TF +L P+  +G Y+G +++ +  +L
Sbjct  248  MGKTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQNTQAMLL  307

Query  308  FASVQTLGKAAHLKHFAPDHFDYIVVDEFHHASAKTYLNILSYFEPKFLLGLTATPERTD  367
            FASV T+GK  HL++FA+DHFDYIVVDEFHHA+A++Y N+L+YF PKFLLGLTATPER+D
Sbjct  308  FASVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLTATPERSD  367

Query  368  QANILSLCHDNLVFERNLVHGINDEILVPFHYYGIWDDSVDYQEIPWRNGKFDPTALDAQ  427
            QA+ILSLC+ NLVFERNLVHGI++ ILVPF+Y GI D++V+YQEIPWRNGKFDP +LD  
Sbjct  368  QADILSLCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFDPDSLDNA  427

Query  428  FATTRRAKHIFKHWQNRQQTRTLAFCVSKKHADFMAQHFNQTFA-DKGLRALSVHSDSSI  486
            +AT RRA H+++HW++++QTRTLAFCVSKKHADFMA+     F   KG++A++V SDS +
Sbjct  428  LATQRRAEHVYQHWHQKKQTRTLAFCVSKKHADFMAE-----FCLSKGIKAIAVYSDSKV  482

Query  487  RRNEALSMLDKGEIQILFSVDLFNEGTDLPSIDTVLMLRPTESNIVFIQQLGRGLRR--H  544
            RRN+AL  LD G I+ILFSVDLFNEGTDLP+IDT+LMLRPTES+I+F+QQLGRGLRR  +
Sbjct  483  RRNQALQWLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRSIE  542

Query  545  KGKSHLVVLDFIGNHRSFLNKKEILGISTSSSLEQLSDKSQTRPELGKGCFTNIDPKIID  604
              KS LVV+DFIGNH SFLN+   L     S L +   K Q ++ L  GC   +D  +++
Sbjct  543  TQKSKLVVIDFIGNHDSFLNRPTTL--YNVSHLKDALAKHQQQA-LPDGCHVTFDITLLN  599

Query  605  FWQTLTKQLRYSAQEEFEHLTNHLGHRPRAVEYYRAGYDLAKVNKQHGSWLELVASMDKD  664
            FWQ LT+++R+S Q+E+++L+++L+HRP A E++  G +++KV KQ  SW++LVAS ++D
Sbjct  600  FWQQLTRKMRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQEND  659

Query  665  PELDYLVREHRDFFANAIQKASMTKSFKAILLEAYLELDGFRDAPSIEVLASKSWHVLSR  724
            PEL  +V    DF+ ++I+ +SM+KSFKAILLEA LELDG+R +P++  LA  S  V++R
Sbjct  660  PELAEIVTRYGDFLLHGIESTSMSKSFKAILLEALLELDGLRTPPTLATLAECSYTVIAR  719

Query  725  YPKLKASDLSEINQRLTADSQAWLKYWLSNPINAFVGGNKTKNRVWFKL-VDGKLKADFD  783
             P L A DL+E  +++ A  + WL+YW +NPI+AF   + TK+  WF +  + ++ A+FD
Sbjct  720  RPDLMAEDLTENAKQFKAADKDWLNYWRNNPIKAF-TNKATKQATWFSIDSQQRFVANFD  778

Query  784  VAPLQQQAFHDFVKELVDLQLAQYSDRQPKQTHQTVAQPTTPA-------EAANEGTLLP  836
            +   + + +HD ++ELVDL+LA+Y++R PKQ  + + ++ + A       E    GT +P
Sbjct  779  IREQDLERLHDCIQELVDLRLAEYAQR-PKQHKENLIKAKSKAAVISLIPEQKTIGTPIP  837

Query  837  YYPNLKIACGHFKTGSHEEVEH--IPVDMANLNPQKHFLARASGNSMNGGKTPILDGDLL  894
            +YP+LKIACGHFK GS+ EV+   +P + + L+P +HF++ ASGNSMNGGK PI DGDLL
Sbjct  838  FYPELKIACGHFKRGSEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNGGKNPIQDGDLL  897

Query  895  LLEFVTPISAGSITGNTMAIEIQDNSGENQYLLRVVQKDAQGRYWLKANNPDYELMPAND  954
            LLE VTP SAGSI+  TMAIE QD++G+NQYLLRVV+K A  +Y L+A+NP Y  MPA D
Sbjct  898  LLEWVTPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSYPNMPATD  957

Query  955  SMKTFARLKKVITQ  968
            +MKTFARLK VI +
Sbjct  958  AMKTFARLKAVIKN  971

12) VV2200 in NC_005139


> NC_009457_P1|4|G4|147675167|YP_001216293.1|Vibrio_cholerae_O395|-|3585..6524|-|VC0395_A0337|DEAD/DEAH 
box helicase
Length=979

 Score =  811 bits (3069),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 502/946 (54%), Positives = 708/946 (75%), Gaps = 32/946 (3%)

Query  1    MSFIQPSGLDLLLPSIHEAIERKKSHQRPLKLRILTSDYLHITHPIALRSLIELEGDEIE  60
            +SFIQPSGLDLL+ ++ +A+      Q   ++++LTSDYL ITHP+ALR L+ L     +
Sbjct  42   VSFIQPSGLDLLFDPLFDAV------QSGAQVKLLTSDYLSITHPVALRRLMLLTERGAQ  95

Query  61   IKIFEANNRSFHLKSYIFVRSDEARSIYQGAAFVGSNNISKTALTDAHEWCLRLDYQQPD  120
             ++FE  ++SFH+KSYIFVR +++  I +G A +GSNNISKTAL D+HEW LR D++ P+
Sbjct  96   CRVFECGQHSFHMKSYIFVRCEQG-EILEGCAWIGSNNISKTALLDSHEWALRHDFEPPE  154

Query  121  NSPQAAQFHNIRTQFDKLFHHPSAILLTDEWIDSYIRR----RTPPKLSAVGDTTLLDNE  176
             S+ A +F +IR QF  +F+H ++  LT+ WID Y+ R    +    ++ ++D+   ++E
Sbjct  155  TSAAALEFLHIRQQFASIFNHTNSKDLTHTWIDHYLERYQQAKKQHGMPILADSQDEQSE  214

Query  177  EYSPNSAQLDALQRLSETRQKGNVRGLVVMGTGMGKTWLSAFDAKQLEAKRVLFVAHREE  236
              +PN+ Q++AL  L+ TR +G  RGLVV++TGMGKTWL+AFDA Q ++ +VLFVAHREE
Sbjct  215  PPAPNAVQVEALTALNATRAQGFSRGLVVLATGMGKTWLAAFDALQTQSTKVLFVAHREE  274

Query  237  ILTQALMTFAKLWPQKSAGYYHGKSKQKNKEMLFASVQSLGKTAQLKHFSPDYFDYIVVD  296
            IL QA  TF +L P+  +G Y+G +++ +  +LFASV ++GK  +L++F++D FDYIVVD
Sbjct  275  ILLQAEKTFCQLIPNAKTGLYNGVTQNTQAMLLFASVATIGKQNHLQRFAADHFDYIVVD  334

Query  297  EFHHASAKTYLNILNHFEPKFLLGLTATPERTDQANILSLCHDNLVFERNLVHGINDEIL  356
            EFHHA+A++Y N+L  F PKFLLGLTATPER+DQA+ILSLC+ NLVFERNLVHGI++ IL
Sbjct  335  EFHHAAARSYRNLLTYFKPKFLLGLTATPERSDQADILSLCDSNLVFERNLVHGIDEKIL  394

Query  357  VPFHYHGIWDDSVDYQEIPWRNGKFDPTALDAQFATTRRAKHIFKHWQNRQQTRTLAFCV  416
            VPF+YHGI D++V+YQEIPWRNGKFDP +LD  +AT RRA H+++HW++++QTRTLAFCV
Sbjct  395  VPFDYHGIYDQAVNYQEIPWRNGKFDPDSLDNALATQRRAEHVYQHWHQKKQTRTLAFCV  454

Query  417  SKKHADFMAQHFNQTFA-DKGLRALSVHSDSSIRRNEALSMLDKGEIQILFSVDLFNEGT  475
            SKKHADFMA+     F   KG++A++V SDS +RRN+AL  LD G I+ILFSVDLFNEGT
Sbjct  455  SKKHADFMAE-----FCLSKGIKAIAVYSDSKVRRNQALQWLDSGKIDILFSVDLFNEGT  509

Query  476  DLPSIDTVLMLRPTESNIVFIQQLGRGLRR--HTDKSHLVVLDFIGNHRSFLNKKEILGI  533
            DLP+IDT+LMLRPTES+I+F+QQLGRGLRR  +T+KS LVV+DFIGNH SFLN+   L  
Sbjct  510  DLPAIDTILMLRPTESKILFLQQLGRGLRRSIETQKSKLVVIDFIGNHDSFLNRPTTL--  567

Query  534  STSSSLEQLSDKSQTRPELGKGCFTNIDPKIIDFWQTLTKQLRYSAQEEFEHLTNHLGHR  593
               S L +   K Q ++ L  GC   +D  +++FWQ LT+++R+S Q+E+++L+++L+HR
Sbjct  568  YNVSHLKDALAKHQQQA-LPDGCHVTFDITLLNFWQQLTRKMRFSVQDEYQQLAHQLAHR  626

Query  594  PRAVEYYRAGYDLAKVNKQHGSWLELVASMDKDPELDYLVREHRDFFANAIQKASMTKSF  653
            P A E++  G +++KV KQ  SW++LVAS ++DPEL  +V    DF+ ++I+ +SM+KSF
Sbjct  627  PTASEFFYHGIEISKVRKQAQSWFHLVASQENDPELAEIVTRYGDFLLHGIESTSMSKSF  686

Query  654  KAILLEAYLELDGFRDAPSIEVLASKSWHVLSRYPKLKASDLSEINQRLTADSQAWLKYW  713
            KAILLEA LELDG+R +P++  LA  S  V++R P L A DL+E  +++ A  + WL+YW
Sbjct  687  KAILLEALLELDGLRTPPTLATLAECSYTVIARRPDLMAEDLTENAKQFKAADKDWLNYW  746

Query  714  LSNPINAFVGGNKTKNRVWFKL-VDGKLKADFDVAPLQQQTFHDFVKELVDLQLAQYSDR  772
             +NPI+AF   + TK+  WF +  + ++ A+FD+   + + +HD ++ELVDL+LA+Y++R
Sbjct  747  RNNPIKAF-TNKATKQATWFSIDSQQRFVANFDIREQDLERLHDCIQELVDLRLAEYAQR  805

Query  773  PPKQTHQTVAQPTTPA------EAANEGTLLPYYPNLKIACGHFKTGSHEEVEH--IPVD  824
            P ++ ++ +   + +A      E    GT +P+YP+LKIACGHFK GS+ EV+   +P +
Sbjct  806  PKQHKENLIKAKSKAAVISLIPEQKTIGTPIPFYPELKIACGHFKRGSEREVQTYFVPDG  865

Query  825  MANLNPQKHFLARASGNSMNGGKTPILDGDLLLLEFVTPISAGSITGNTMAIEIQDNSGE  884
             + L+P +HF++ ASGNSMNGGK PI DGDLLLLE VTP SAGSI+  TMAIE QD++G+
Sbjct  866  YGLLDPTRHFVSPASGNSMNGGKNPIQDGDLLLLEWVTPSSAGSISNLTMAIETQDETGD  925

Query  885  NQYLLRVVQKDAQGRYWLKANNPDYELMPANDSMKTFARLKKVITQ  930
            NQYLLRVV+K A  +Y L+A+NP Y  MPA D+MKTFARLK VI +
Sbjct  926  NQYLLRVVRKIAPNQYELQAQNPSYPNMPATDAMKTFARLKAVIKN  971

13) GU3_05650 in NC_016745


> NC_009457_P1|4|G4|147675167|YP_001216293.1|Vibrio_cholerae_O395|-|3585..6524|-|VC0395_A0337|DEAD/DEAH 
box helicase
Length=979

 Score =  770 bits (2913),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 487/966 (51%), Positives = 703/966 (73%), Gaps = 31/966 (3%)

Query  16   NQPLLTPLLEAINRTGKGSAITMAVSFIRQSGLSLLQDALSEALGRGVELRVLTSDYLDV  75
            N+PLL  L++AIN+   ++ I ++VSFI+ SGL LL D+L +A+  G ++++LTSDYL +
Sbjct  21   NDPLLPRLVQAINH---ATEIEISVSFIQPSGLDLLFDPLFDAVQSGAQVKLLTSDYLSI  77

Query  76   TEPVALRELMLLVERGADVRIYQSSGEAGFHLKSYLFIHQYTEQRLQGKGFVGSSNLSKA  135
            T+PVALR LMLL ERGA+ R+++  G+ +FH+KSY+F++    + L+G + +GS+N+SK+
Sbjct  78   THPVALRRLMLLTERGAQCRVFEC-GQHSFHMKSYIFVRCEQGEILEGCAWIGSNNISKT  136

Query  136  ALTQSLEWSWQLTVNDDGHSPAATSLLALQAQMERLFNDSRVVVLSNEWIDDYLKRYRQS  195
            AL +S EW+ +   +    S+AA  +L ++ Q   +FN++    L++ WID+YL RY+Q+
Sbjct  137  ALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKDLTHTWIDHYLERYQQA  196

Query  196  PLTHLRLVTGDTRSDDETLRETPMPNSVQASALAALQVSRTEGYRRGLVVMATGLGKTWL  255
               H   + +D++ ++    E P PN+VQ  AL+AL+ +R++G+ RGLVV+ATG+GKTWL
Sbjct  197  KKQHGMPILADSQDEQS---EPPAPNAVQVEALTALNATRAQGFSRGLVVLATGMGKTWL  253

Query  256  AAFDVRQMQAARILFVAHREEIIRQAQSTFIHMNPKAHIGLYTG-KQKDQADWLFASVQT  314
            AAFD  Q Q++++LFVAHREEI+ QA+ TF ++ P+A  GLY G  Q+ QA  LFASV T
Sbjct  254  AAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQNTQAMLLFASVAT  313

Query  315  LGRDAHLRHFARDHFDYIVVDEFHHATASSYRRLLDHFQPRFLLGLTATPDRTDQADILA  374
            +G++ HL++FA DHFDYIVVDEFHHA+A SYR LL  F+P+FLLGLTATP+R+DQADIL+
Sbjct  314  IGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLTATPERSDQADILS  373

Query  375  LCDDNLVFECHLREAIELRHLVPLVYHGIYDEHINYEEIPWRNGRFDPDALEHAFASHKR  434
            LCD NLVFE +L ++I+ + LVP+ YHGIYD+ +NY+EIPWRNG+FDPD+L++A+A+++R
Sbjct  374  LCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFDPDSLDNALATQRR  433

Query  435  ARHALEQWRRLGRSRTLAFCVSVRHAEFMAQLFKDEGIKAAAVYAESSLPRNQALNDLAA  494
            A H  ++W++  ++RTLAFCVS +HA+FMA++    GIKA AVY++S + RNQAL+ L +
Sbjct  434  AEHVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDSKVRRNQALQWLDS  493

Query  495  GRLSVIFSVDLFNEGTDLPAIDTLLMLRPTESRIVFLQQLGRGLR--LHPGKQDLMVIDL  552
            G++ ++FSVDLFNEGTDLPAIDT+LMLRPTES+I+FLQQLGRGLR  ++  K  L+VID+
Sbjct  494  GKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRSIETQKSKLVVIDF  553

Query  553  VGNH------RSCLFKPWQLQQALGGSGTPGKTDITLPPGCFINLDPQLLKLADQLRYGS  606
            +GNH       + L++  +L++AL+        + +LP GC + +D  LL++ +QL    
Sbjct  554  IGNHDSFLNRPTTLYNVSHLKDALA-----KHQQQALPDGCHVTFDITLLNFWQQLTRKM  608

Query  607  RVKVADDYCRLRDQLGARPTAVQAFQAGIDFTKLRKQHGSWFGLVHDQGDLTEDAEQVLE  666
            R  V D+Y +L +QL+ RPTA + F  GI+++K+RKQ  SWF LV  Q +   +  +++ 
Sbjct  609  RFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQEN-DPELAEIVT  667

Query  667  KLNDFLLTGIETTKLTKCFKLILLQALLELDGLRQPPLLTELAEQSRLVLERHPDLFMVD  726
            +  DFLL GIE+T ++K FK ILL+ALLELDGLR PP L+ LAE S  V+ R+PDL   D
Sbjct  668  RYGDFLLHGIESTSMSKSFKAILLEALLELDGLRTPPTLATLAECSYTVIARRPDLMAED  727

Query  727  LAEPQQAMAADSAQWLSYWSKNPIKHSTGGNNDSQADYWFEIQ-EDRFCPRFILPVNERD  785
            L+E  +   A   +WL+YW +NPIK  T  N+ ++   WF I+ ++RF + F +  ++ +
Sbjct  728  LTENAKQFKAADKDWLNYWRNNPIKAFT--NKATKQATWFSIDSQQRFVANFDIREQDLE  785

Query  786  TLHDMMQELVDLRLAEY-RRRKIQFQSFQKTAIPPQA---IPDADVVE--LPFYPDLKIA  839
             LHD +QELVDLRLAEY +R K + +++ K+   +     IP+   +   +PFYP+LKIA
Sbjct  786  RLHDCIQELVDLRLAEYAQRPKQHKENLIKAKSKAAVISLIPEQKTIGTPIPFYPELKIA  845

Query  840  CGHFRTGSSDQADMMAVPGENISVDSQRYFLARASGHSMNGGKNPVNDGDLLLLEWITPD  899
            CGHF+ GS  + +   VP+    +D+ R F++ ASG+SMNGGKNP++DGDLLLLEW+TP 
Sbjct  846  CGHFKRGSEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNGGKNPIQDGDLLLLEWVTPS  905

Query  900  TAGSISNQTLAIERQDETGDDQYLLRVVSKTADGSYLLHATNPDYEDIPVTDEMKPFARL  959
            +AGSISN T+AIE QDETGD+QYLLRVV K A   Y L+A NP Y ++P TD MK FARL
Sbjct  906  SAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSYPNMPATDAMKTFARL  965

Query  960  RSVLKG  965
            ++V+K 
Sbjct  966  KAVIKN  971

14) MRBBS_1085 in NC_018268


> NC_009457_P1|4|G4|147675167|YP_001216293.1|Vibrio_cholerae_O395|-|3585..6524|-|VC0395_A0337|DEAD/DEAH 
box helicase
Length=979

 Score =  720 bits (2722),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 455/972 (47%), Positives = 679/972 (70%), Gaps = 44/972 (4%)

Query  199   DRLTVGGKQHHFLPKLCRGIKAADQVDMAVAFVKTTGLNLLFPDLITALQRTSTKVRVRI  258
             ++L+ GG ++ +LP+L ++I+ A +++++V+F++ +GL+LLF  L+ A+Q  +   +V++
Sbjct  13    HKLSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPLFDAVQSGA---QVKL  69

Query  259   LTSDYLDITDPDALRKLILLQEQGAQVGVYQSRGSSFHMKAYLFA-GQKASTFWGRAFIG  317
             LTSDYL IT+P ALR+L+LL E+GAQ  V++    SFHMK+Y+F   +++  + G A IG
Sbjct  70    LTSDYLSITHPVALRRLMLLTERGAQCRVFECGQHSFHMKSYIFVRCEQGEILEGCAWIG  129

Query  318   SSNISRQALQDGLEWNYQIDF-PPDRG-----YFEAASRFEELFQHPNVVPLTDGWIDDY  371
             S+NIS+ AL D+ EW  + DF PP+ +     +++   +F  +F+H N   LT+ WID+Y
Sbjct  130   SNNISKTALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKDLTHTWIDHY  189

Query  372   AKR----RRPPPQPV-APGSNEQEKPPLANPVQRAALEALAQTREEGYCRGLVVLATGLG  426
               R    ++    P+ A + +EQ  PP +N+VQ  AL AL  TR +G+ RGLVVLATG+G
Sbjct  190   LERYQQAKKQHGMPILADSQDEQSEPPAPNAVQVEALTALNATRAQGFSRGLVVLATGMG  249

Query  427   KTWLSAFDAVQMGARRVLFVAHREEILYQAAETYLRIKPNSRVGFYMGKQRDRSVDILCA  486
             KTWL+AFDA+Q  + +VLFVAHREEIL QA  T+ ++ PN++ G+Y G  ++    +L A
Sbjct  250   KTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQNTQAMLLFA  309

Query  487   SVQTLGREAHLERFNPSHFDYIVVDEFHHASAPTYRRLLSYFASQFLLGLTATPDRTDRA  546
             SV T+G++ HL+RF + HFDYIVVDEFHHA+A +YR LL+YF ++FLLGLTATP+R+D+A
Sbjct  310   SVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLTATPERSDQA  369

Query  547   DILSLCDDNLVYEYPLFDGVRGLHLVPFHYHGIYDNTVDYKEIPWRNGKFDPNLLAHKLA  606
             DILSLCD NLV+E  L +G+    LVPF+YHGIYD++V+Y+EIPWRNGKFDP+ L + LA
Sbjct  370   DILSLCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFDPDSLDNALA  429

Query  607   TLGRARHALRVWRQYRQSRTLAFCVSRPHADFMAAQFTKQGITAASVHGESEMSRGEALE  666
             T  RA H  + W+Q +Q+RTLAFCVS+ HADFMA     +GI A +V ++S + R +AL+
Sbjct  430   TQRRAEHVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDSKVRRNQALQ  489

Query  667   LLDEGRLEIVFSVDLFNEGVDLPAIDTVLLLRPTESKVLFLQQIGRGLRHCKETGKQKLV  726
              LD G+++I+FSVDLFNEG DLPAIDT+L+LRPTESK+LFLQQ+GRGLR+  ET K KLV
Sbjct  490   WLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRSIETQKSKLV  549

Query  727   ILDFVGNHHSFLHKPQALMGEAMNHRQLADFGRRAEENRLELPDGCFVNYDLEVIDFLKG  786
             ++DF+GNH+SFL++P +L   +     LA   ++A      LPDGC V +D+ +++F + 
Sbjct  550   VIDFIGNHDSFLNRPTTLYNVSHLKDALAKHQQQA------LPDGCHVTFDITLLNFWQQ  603

Query  787   LDQK---GAEKDYQALKDTLGRRPTLTEYYHFGANLTQTRKQHGSWFGLLKDMEDLSETE  843
             L +K   + + +YQ L + L++RPT +E++  G ++++ RKQ  SWF L+   E+ +E  
Sbjct  604   LTRKMRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQENDPELA  663

Query  844   SALHTAHGRFLVE-LETTAMNKSFKMVLIEAFQQRGGWRHAPTLSELASESWVILKRRPK  902
               + T  G FL++ +E+T+M+KSFK +L+EA+ + +G R +PTL+ LA  S  ++ RRP 
Sbjct  664   EIV-TRYGDFLLHGIESTSMSKSFKAILLEALLELDGLRTPPTLATLAECSYTVIARRPD  722

Query  903   LFAE-VAEAVRYVDGSSLDWQRYWKRNPVEHWTN---KKPPFFTVD-EDRLIPGFSVSDE  957
             L AE ++E  +   ++  DW  YW+ NP+   TN   K++  F++D ++R+++ F + ++
Sbjct  723   LMAEDLTENAKQFKAADKDWLNYWRNNPIKAFTNKATKQATWFSIDSQQRFVANFDIREQ  782

Query  958   SLSSFEEMVQELIDYRLASYENRIDSRTTS---PAFANNVTPMAPE----GTQLPYFPSL  1010
              L  +++ +QEL+D RLA Y +R   +  +   +     V ++ PE    GT +P++P L
Sbjct  783   DLERLHDCIQELVDLRLAEYAQRPKQHKENLIKAKSKAAVISLIPEQKTIGTPIPFYPEL  842

Query  1011  KIACGHF-RNSRADVEEYLTLGPNYGRLDANRHFLARASGNSMNGGKQPARNGDFLLLEQ  1069
             KIACGHF R S  +V+ Y+ +   YG LD+ RHF++ ASGNSMNGGK+P ++GD+LLLE 
Sbjct  843   KIACGHFKRGSEREVQTYF-VPDGYGLLDPTRHFVSPASGNSMNGGKNPIQDGDLLLLEW  901

Query  1070  ISPDKAGSNNNMTLAIERVDEVGDTQYLLRNVRKSASGKYVLKAANPDYEDIIVTAELIE  1129
             ++P  AGS +N+T+AIE  DE GD QYLLR VRK A+ +Y L+A NP Y ++  T  +  
Sbjct  902   VTPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSYPNMPATDAM--  959

Query  1130  QFRTFARLEAVI  1141
               +TFARL AVI
Sbjct  960   --KTFARLKAVI  969

15) MEALZ_1182 in NC_016112


> NC_009457_P1|4|G4|147675167|YP_001216293.1|Vibrio_cholerae_O395|-|3585..6524|-|VC0395_A0337|DEAD/DEAH 
box helicase
Length=979

 Score =  700 bits (2646),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 477/977 (49%), Positives = 697/977 (72%), Gaps = 45/977 (4%)

Query  11   TGGDDPFLPKLKNDINSANRIDITVSFIRQsglslildalidalERGVDIRILTGDYLCV  70
             G++DP+LP+L + IN A  I+I+VSFI+ SGL L++D+L+DA++ G ++++LT+DYL +
Sbjct  18   GGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPLFDAVQSGAQVKLLTSDYLSI  77

Query  71   TEPVALRHLLLLQESGADVRVFETHNGQSFHMKAYIFAFSSEQGKSGGHAYVGSSNISSS  130
            T+PVALR+L+LL E GA+ RVFE    +SFHMK+YIF    +     G A +GS+NIS +
Sbjct  78   THPVALRRLMLLTERGAQCRVFEC-GQHSFHMKSYIFVRCEQGEILEGCAWIGSNNISKT  136

Query  131  ALKHGLEWNLRVALEENTAR-----FDEICRKFEQIYTHSSTKRLSNQWIEVYQQRFEN-  184
            AL ++ EW LR  +E   +      F +I ++F  I+ H+++K L++ WI+ Y +R+++ 
Sbjct  137  ALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKDLTHTWIDHYLERYQQA  196

Query  185  ---QPVVLFSGWEKEETTLPPEPNAIQQEALKALKHSREMGYRRGLVVMATGLGKTWLAA  241
               + + ++++  ++E + PP PNA+Q EAL AL+ +R  G+ RGLVV+ATG+GKTWLAA
Sbjct  197  KKQHGMPILAD-SQDEQSEPPAPNAVQVEALTALNATRAQGFSRGLVVLATGMGKTWLAA  255

Query  242  FDSLQLDSDKVLFVAHREEILSQAEYTFVCIRSKAKVAKFTGQDHQLDADMLFASIQTLG  301
            FD+LQ +S KVLFVAHREEIL QAE TF  + ++AK + + G  ++ +A +LFAS+ T+G
Sbjct  256  FDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQNTQAMLLFASVATIG  315

Query  302  KQHHLNKFAPDHFDYIVVDEFHHASARTYRQLLNHFKPRFLLGLTATPERTDQADILSLC  361
            KQ+HL++FA+DHFDYIVVDEFHHA+AR+YR+LL  FKP+FLLGLTATPER+DQADILSLC
Sbjct  316  KQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLTATPERSDQADILSLC  375

Query  362  DDNLVYRRDMFDGINSGLLSPFNYYGIADQEVDYQSIPWRNGKFDPDQLQNKLATQARAK  421
            D NLV+ R++ +GI+  +L PF+Y GI DQ V+YQ IPWRNGKFDPD L+N LATQ RA 
Sbjct  376  DSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFDPDSLDNALATQRRAE  435

Query  422  HALKRWVELKQVRTLAFCVSKKHADYMADYFQQQGYKAVSVHSDSSIRRNDALSKLENAE  481
            H  ++W + KQ RTLAFCVSKKHAD+MA++   +G KA++V SDS +RRN+AL  L+++ 
Sbjct  436  HVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDSKVRRNQALQWLDSGK  495

Query  482  IDIIFSVDLFNEGIDLPLIDTVLLLRPTESKIIFlqqlgrg--lrrhllKDSLVVLDFIG  539
            IDI+FSVDLFNEG DLP IDT+L+LRPTESKI+FLQQLGRG     +  K  LVV+DFIG
Sbjct  496  IDILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRSIETQKSKLVVIDFIG  555

Query  540  NHLSFFRKPEALFNVGVSKRERSEFIRQIQSNTLKLPDGCYVNFDLQAIDFLAKLIATNI  599
            NH SF+ +P +L+NV+   + +  + ++ Q     LPDGC V FD+  ++F  +L     
Sbjct  556  NHDSFLNRPTTLYNVS---HLKDALAKHQQQA---LPDGCHVTFDITLLNFWQQLTRKMR  609

Query  600  DTQEEIYRSLKASKDRRPTLAEFYNAGGEVQVIRQQYSQWLNFIVSEQDLSVEESECFSC  659
             + ++ Y+ L     +RPT +EF+  G E+  +R+Q   W++++ S+++   E +E  + 
Sbjct  610  FSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQEN-DPELAEIVTR  668

Query  660  YKDF-FKEIEVTNLTKSYKIVLLEALLELDGFRQAIDIKDLSMHCFGIIQRRRALL-DDL  717
            Y DF +  IE T+++KS+K +LLEALLELDG+R +  +  L+   + +I RR  L+ +DL
Sbjct  669  YGDFLLHGIESTSMSKSFKAILLEALLELDGLRTPPTLATLAECSYTVIARRPDLMAEDL  728

Query  718  PD---EFRAVDLLEGRAVNRWRSYWKSNPIKAWTGGNKATDQA-FFKIDDERFQFIG--D  771
             +   +F+A D       + W +YW++NPIKA T  NKAT QA  F ID ++ +F++  D
Sbjct  729  TENAKQFKAAD-------KDWLNYWRNNPIKAFT--NKATKQATWFSIDSQQ-RFVANFD  778

Query  772  VPENEIDIFLALIGELIDYRYMQYEERLR--KEPPVQSRPKADVIDINSVRK---QRIPY  826
            + E++++ +   I EL+D R  +Y +R +  KE  +++++KA VI + + +K     IP+
Sbjct  779  IREQDLERLHDCIQELVDLRLAEYAQRPKQHKENLIKAKSKAAVISLIPEQKTIGTPIPF  838

Query  827  FQDLKIACGFFKTSQHDEDSVHKVALPEHYGRLDSERHFIARATGNSMDGGKNPIKDGDF  886
            + +LKIACG FK +   E  V+   +P+ YG LD+ RHF++ A+GNSM+GGKNPI+DGD+
Sbjct  839  YPELKIACGHFKRG--SEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNGGKNPIQDGDL  896

Query  887  LLLEAITPDRAGSISHQIVAIERQDVSGDDQYLLRYVRKLGQGEYELIANNPDYKPMRAT  946
            LLLE +TP  AGSIS+  +AIE QD +GD+QYLLR VRK++  +YEL A+NP Y  M AT
Sbjct  897  LLLEWVTPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSYPNMPAT  956

Query  947  EDMRTFARFKGVIDSDD  963
            + M+TFAR+K+VI ++ 
Sbjct  957  DAMKTFARLKAVIKNNS  973

16) CAP2UW1_4230 in NC_013194


> NC_009457_P1|4|G4|147675167|YP_001216293.1|Vibrio_cholerae_O395|-|3585..6524|-|VC0395_A0337|DEAD/DEAH 
box helicase
Length=979

 Score =  676 bits (2556),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 459/977 (47%), Positives = 690/977 (71%), Gaps = 41/977 (4%)

Query  197   GASRLVTGG-DNPFLPHLCQSISRATEVDFAVAFIKATGlrlllpdlhdtlsspFQTSNR  255
             ++ +L +GG ++P+LP+L Q+I++ATE++++V+FI+++GL LL+  L       F++ + 
Sbjct  11    SGHKLSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPL-------FDAVQS  63

Query  256   PARLRVVTSDYLDITDPDAlrlllllQEKGAQVRVYEAANSSFHLKAYLFARYAESGQLH  315
              A+++++TSDYL IT+P ALR L+LL E+GAQ RV+E ++ SFH+K+Y+F R  ++  L+
Sbjct  64    GAQVKLLTSDYLSITHPVALRRLMLLTERGAQCRVFECGQHSFHMKSYIFVRCEQGEILE  123

Query  316   GTAFIGSSNISRQALQDGLEWNYRIDYPGDDG------FLEAQRQFEGLFTHPRTVLLTD  369
             G A IGS+NIS+ AL D+ EW  R D+   +       FL+ ++QF ++F H  +  LT+
Sbjct  124   GCAWIGSNNISKTALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKDLTH  183

Query  370   EWIERY-----EARRVTPPQAVGPGSQEQEAPPRATCVqlaalaalqaTRGQGFRRGLVV  424
              WI++Y     +A++      ++ + +EQ  PP +  VQ+ AL+AL+ATR+QGF RGLVV
Sbjct  184   TWIDHYLERYQQAKKQHGMPILADSQDEQSEPPAPNAVQVEALTALNATRAQGFSRGLVV  243

Query  425   LATGLGKTWLAVFDAEQLGARRVLFVAHREEILEQAAETFLRIRPKSRVGFYVGQRRDVE  484
             LATG+GKTWLA FDA Q  + +VLFVAHREEIL QA  TF ++ P+++ G+Y G  ++ +
Sbjct  244   LATGMGKTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQNTQ  303

Query  485   VDVLCASVQTLSRSSHLERFLPGHFDYLVIDEFHHAAAATYRRLLSYFTPRFLLGLTATP  544
               +L ASV T+++ +HL+RF ++HFDY+V+DEFHHAAA +YR LL+YF P+FLLGLTATP
Sbjct  304   AMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLTATP  363

Query  545   DRTDQSDILSLCDDNLVFTHDLFAGIDCGLLAPFHYYGIYDDSVDYREIPWRNGRFDPEQ  604
             +R+DQ+DILSLCD NLVF ++L  GID  +L PF+Y GIYD++V+Y+EIPWRNG+FDP+ 
Sbjct  364   ERSDQADILSLCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFDPDS  423

Query  605   LANKlatlararhalrEWRQRGQQRTLAFCMSIRHAEFMaahflqagvaaaaVYSGSSMS  664
             L N LAT  RA H  ++W+Q+ Q RTLAFC+S +HA+FMA   L  G+ A AVYS+S + 
Sbjct  424   LDNALATQRRAEHVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDSKVR  483

Query  665   RGDALAQLRDRRLWVIFSVDLFNEGVDLPAIDTVMMLRPTESKVLFLQQLGRGLRKT--T  722
             R +AL  L   ++ ++FSVDLFNEG DLPAIDT++MLRPTESK+LFLQQLGRGLR++  T
Sbjct  484   RNQALQWLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRSIET  543

Query  723   EKERLVVLDFIGNHHSFLHKPAALLNVGASYRQLAEFARQVEQQRLVLPAGCFVNYDLQL  782
             +K +LVV+DFIGNH+SFL++P++L NV+    +L +      +Q+  LP GC V +D+ L
Sbjct  544   QKSKLVVIDFIGNHDSFLNRPTTLYNVS----HLKD--ALAKHQQQALPDGCHVTFDITL  597

Query  783   IEFLKSLDGK---GTEKDYAALKEGLGRRPCLSEFYRSGANVQTMRRQFGSWFELLQAMG  839
             ++F + L  K   + + +Y  L + L++RP  SEF+  G ++  +R+Q  SWF+L+ +  
Sbjct  598   LNFWQQLTRKMRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQE  657

Query  840   DLTQAESAAATFQLPFLREVEATRMTRSFKMVMLEALQELGGWLKPPTLSALAERSWRVL  899
             +  +     + +   +L+ +E+T M++SFK ++LEAL EL+G   PPTL++LAE S  V+
Sbjct  658   NDPELAEIVTRYGDFLLHGIESTSMSKSFKAILLEALLELDGLRTPPTLATLAECSYTVI  717

Query  900   QRRRPLLADLPAEMAVLADGTDAAWQRYWLGNPVNAWIGGNLAEATSAFFRVE-DQRLAP  958
              RR  L+A+  +E A    ++D  W  YW  NP++A       +AT   F ++ +QR+ +
Sbjct  718   ARRPDLMAEDLTENAKQFKAADKDWLNYWRNNPIKAFTNKATKQAT--WFSIDSQQRFVA  775

Query  959   NFSLPADQLEPFSALVQELVDYRLAAYETRRPQEQAPDNVIHLRRPAGGAALSRIE----  1014
             NF +  ++LE +   +QELVD RLA Y ++RP+++  +N+I  +  A+  +L   +    
Sbjct  776   NFDIREQDLERLHDCIQELVDLRLAEY-AQRPKQHK-ENLIKAKSKAAVISLIPEQKTIG  833

Query  1015  --LPFFPNLRIACGHFRTGSADAPEFRSVGSGHGRLDPARHFIARASGNSMDGGKEPIRN  1072
               +PF+P+L+IACGHF+ GS    +   V  G G LDP+RHF++ ASGNSM+GGK+PI++
Sbjct  834   TPIPFYPELKIACGHFKRGSEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNGGKNPIQD  893

Query  1073  GDYLLLEHLGAGSAGSITGCVLAIERQDAAGDDQYLLRVVHKTADGRYLLKANNPDYRDL  1132
             GD LLLE + ++SAGSI+   +AIE QD +GD+QYLLRVV+K A  +Y L+A+NP Y ++
Sbjct  894   GDLLLLEWVTPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSYPNM  953

Query  1133  PASDEMRTLARFKAVID  1149
             PA+D M+T+AR+KAVI 
Sbjct  954   PATDAMKTFARLKAVIK  970

17) ambt_18570 in NC_015554


> NC_009457_P1|4|G4|147675167|YP_001216293.1|Vibrio_cholerae_O395|-|3585..6524|-|VC0395_A0337|DEAD/DEAH 
box helicase
Length=979

 Score =  661 bits (2500),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 435/970 (45%), Positives = 661/970 (69%), Gaps = 33/970 (3%)

Query  7    LITGRQEKHLLHEIRDALKTATNIEIAVSFIRNSGLNLIVDDIEAAMSSSTRNVELTVLT  66
            L +G  +  LL  + +A++ AT+IEI+VSFI+ SGL+L+ D +  A+ S++   ++ +LT
Sbjct  15   LSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPLFDAVQSGA---QVKLLT  71

Query  67   SDYMNITEPQALKLLMLLKERGANIQVFESRQATSFHLKSYIFVTDSEQGVVSASAFIGS  126
            SDY++IT+P AL+ LMLL ERGA+ +VFE  Q  SFH+KSYIFV   +  ++ + A IGS
Sbjct  72   SDYLSITHPVALRRLMLLTERGAQCRVFECGQ-HSFHMKSYIFVRCEQGEILEGCAWIGS  130

Query  127  SNISKTALTDGIEWNYRIDYPNNKDSEAEARIDNIREEYNHLLTLPQVKSLSYNWIQDYE  186
            +NISKTAL D+ EW  R D+     S A   + +IR+++  ++   + K L+  WI++Y 
Sbjct  131  NNISKTALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKDLTHTWIDHYL  190

Query  187  VRYNTARKVTPLYSSSALPSETEHEIPTPKDHQVEALEALENARDSGFKKGLVVLATGMG  246
             RY+ A+K   + +  A + + + E P+P+  QVEAL AL+ +R  GF +GLVVLATGMG
Sbjct  191  ERYQQAKKQHGM-PILADSQDEQSEPPAPNAVQVEALTALNATRAQGFSRGLVVLATGMG  249

Query  247  KTYLAAFDAAQFNAKKVLFIAHREEILLQAEASFLKILPSKKVGRYSGKQKDKEFDMLFA  306
            KT LAAFDA Q ++ KVLF+AHREEILLQAE +F +++P+ K G Y+G  ++ +  +LFA
Sbjct  250  KTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQNTQAMLLFA  309

Query  307  SVQTIGRESHLNKFDKNDFDYIVVDEFHHAAANGYQRLLAHFNPSFMLGLTATPNRTDGS  366
            SV TIG+++HL++F  ++FDYIVVDEFHHAAA +Y+ LL+ F+P F+LGLTATP+R+D +
Sbjct  310  SVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLTATPERSDQA  369

Query  367  DILKLCDNKLIYQKDLFDGVNGEVLSPFSYFAIYDKEVDYEHLPWRNGRFDPEKLSNKLA  426
            DIL LCD++L+++++L +G++  +L PF Y +IYD+ V+Y+++PWRNG+FDP+ L N LA
Sbjct  370  DILSLCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFDPDSLDNALA  429

Query  427  TKGRAKHALSEWKEKAQRVSLAFCVSRQHADYMAKYFNENGVSAASVHSDSELTRTEALE  486
            T+ RA H   +W +K Q  +LAFCVS++HAD+MA +   +G+ A +V SDS + R +AL+
Sbjct  430  TQRRAEHVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDSKVRRNQALQ  489

Query  487  GLSDGKIKVLFSVDLFNEGVDLPQIDTVLLLRPTESKILFLQQMGRGLRRS--EGKERLV  544
             L  GKI +LFSVDLFNEG DLP IDT+L+LRPTESKILFLQQ+GRGLRRS    K +LV
Sbjct  490  WLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRSIETQKSKLV  549

Query  545  ILDFVGNHHSFLNRPEMLFAGIKDKPLNRHEIVSIAKNPNPLLPDGCYVNFDLAFIDFLE  604
            ++DF+GNH+SFLNRP  L+     K        ++AK+ +  LPDGC V FD+++++F +
Sbjct  550  VIDFIGNHDSFLNRPTTLYNVSHLKD-------ALAKHQQQALPDGCHVTFDITLLNFWQ  602

Query  605  SLSED---QLDTQYEKLKSSLGRRPSYTEFYTAGANMDKLRKNRGSWWEFVDNKGDLTPA  661
             L+      ++ +Y++L   L++RP+ +EF+  G ++ K+RK+  SW ++V ++ +  P 
Sbjct  603  QLTRKMRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQEN-DPE  661

Query  662  ELEVLEEHLQW-FKDLAVTRVSKSYKLVLLDTLVAHQSLHTQIAFEDLAAWASQWYFDNP  720
              E++    +  + ++  T +SKS+K +LL++L+  ++L+T  ++  LA  +       P
Sbjct  662  LAEIVTRYGDFLLHGIESTSMSKSFKAILLEALLELDGLRTPPTLATLAECSYTVIARRP  721

Query  721  VWLT-DLPESKRDIQSLSKSEWLRHWRDFPIKYWCTEEPESKIVW-fnnsqnkfsfnqsi  778
              ++ DL E+ +++++  K +WL  WR+ PIK   T+ +  +  W   +SQ++F  N  I
Sbjct  722  DLMAEDLTENAKQFKAADK-DWLNYWRNNPIKAF-TNKATKQATWFSIDSQQRFVANFDI  779

Query  779  sASQLETFRLMTKEVNEQRLAAY-----KHKRLSVDIPSTNNIVRF-PEK----EQLPFF  828
               +LE ++   +E+ + RLA Y     +HK   +   S   ++ + PE+      +PF+
Sbjct  780  REQDLERLHDCIQELVDLRLAEYAQRPKQHKENLIKAKSKAAVISLIPEQKTIGTPIPFY  839

Query  829  PDIKIACGHFKTGDAEASEMVNMPSGFGRLDTTKHFIARASGNSMNGGKTPIYDGDYLLL  888
            P++KIACGHFK G     +   +P G+G LD T+HF++ ASGNSMNGGK PI DGD LLL
Sbjct  840  PELKIACGHFKRGSEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNGGKNPIQDGDLLLL  899

Query  889  EQITSNNAGGISNTTVAIERQDTAGDNQYLLRKVLKNNDGSYTLRAANPDYEDITASEDM  948
            E +T+++AG+ISN T+AIE QD +GDNQYLLR V K     Y L+A NP Y ++ A++ M
Sbjct  900  EWVTPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSYPNMPATDAM  959

Query  949  VTFARLKGKV  958
             TFARLK+ +
Sbjct  960  KTFARLKAVI  969

18) Tmz1t_1707 in NC_011662


> NC_009457_P1|4|G4|147675167|YP_001216293.1|Vibrio_cholerae_O395|-|3585..6524|-|VC0395_A0337|DEAD/DEAH 
box helicase
Length=979

 Score =  660 bits (2496),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 460/979 (47%), Positives = 671/979 (69%), Gaps = 46/979 (4%)

Query  197   STHRLFTGEPQHPLLSQLCRSIATADEIDLAVSFVQASGlrlllpdlydalarSADESRL  256
             S H+L +G +++PLL++L ++I  A EI+++VSF+Q+SGL LL+  L+DA+  +A+    
Sbjct  11    SGHKLSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPLFDAVQSGAQ----  66

Query  257   PVRVRILTSDYLDITDPSalrllgllqaqgarVRIFEAGSRSFHLKAYLFTHFPSPSALH  316
                V++LTSDYL IT+P ALR L LL  +GA+ R+FE G +SFH+K+Y+F +      L+
Sbjct  67    ---VKLLTSDYLSITHPVALRRLMLLTERGAQCRVFECGQHSFHMKSYIFVRCEQGEILE  123

Query  317   GSVFIGSSNISRPALTDGLEWNYRIEYPGDDG------FLEARARFEEIFRDPRTVELTD  370
             G   IGS+NIS+ AL D+ EW  R ++   +       FL+ R +F  IF +  + +LT+
Sbjct  124   GCAWIGSNNISKTALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKDLTH  183

Query  371   AWIERY-----EARRVPPPRPIEPSAEESEKPPNPTPIQQEALAALTRTRHDGYLRGLVV  425
             +WI++Y     +A++      +  S +E   PP P ++Q EAL+AL  TR +G+ RGLVV
Sbjct  184   TWIDHYLERYQQAKKQHGMPILADSQDEQSEPPAPNAVQVEALTALNATRAQGFSRGLVV  243

Query  426   LATGLGKTWLAAFDAEQIGARRVLFVAHREEILKQAADTFVRIRPRARIGFYMGQARDTQ  485
             LATG+GKTWLAAFDA Q  + +VLFVAHREEIL QA  TF ++ P A+ G+Y G +++TQ
Sbjct  244   LATGMGKTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQNTQ  303

Query  486   VDVLCASVQTLGRNAHLERFAPQHFDYIIIDEFHHAAAPTYRRLLAHFAPQFLLGLTATP  545
               +L ASV T+G++ HL+RFA++HFDYI++DEFHHAAA +YR LL+ F P+FLLGLTATP
Sbjct  304   AMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLTATP  363

Query  546   DRTDQSDILSLCDDNLVLDRNLFAGIEAGLLAPFHYFGVWDASVDYEEIPWRNGRFDPEK  605
             +R+DQ+DILSLCD NLV++RNL  GI+  +L PF+Y G+ D +V+Y+EIPWRNG+FDP+ 
Sbjct  364   ERSDQADILSLCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFDPDS  423

Query  606   LSNKLATLARARHALKEWRKRAQQRTLAFCVSVRHAEFMATQFRL-QGIEAAAVYAGSEL  664
             L N LAT  RA H  ++W+++ Q RTLAFCVS +HA+FMA +F L +GI A AVY++S +
Sbjct  424   LDNALATQRRAEHVYQHWHQKKQTRTLAFCVSKKHADFMA-EFCLSKGIKAIAVYSDSKV  482

Query  665   ARGEALEQLAEGRLAVIFSVDLFNEGVDLPAIDTVLMLRPTESKILFlqqlgrg--lrrA  722
              R +AL+ L  G++ ++FSVDLFNEG DLPAIDT+LMLRPTESKILFLQQLGRG      
Sbjct  483   RRNQALQWLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRSIE  542

Query  723   EGKERLVVLDFIGNHHSFLHKPQALGQIGSGYKQLAEFARKIETHRLELPTGCYINFDLE  782
               K +LVV+DFIGNH+SFL++P +L +++    +L +   K + +   LP GC + FD+ 
Sbjct  543   TQKSKLVVIDFIGNHDSFLNRPTTLYNVS----HLKDALAKHQQQ--ALPDGCHVTFDIT  596

Query  783   LIDFLKSLDGD---GVARDYEALRDGLGRRPTLAEFYRSGANLGRMRNEYESWFGLVKTM  839
             L++F + L      +V  +Y+ L + L++RPT +EF+  G +++++R++ +SWF LV + 
Sbjct  597   LLNFWQQLTRKMRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQ  656

Query  840   GDLAQTESASLGAHKDLLRELETTAMTKSFKMVLLEAFQELDGWHRTPTLDQLAERSWQV  899
              + ++           LL+ +E+T+M+KSFK +LLEA+ ELDG +  PTL  LAE S  V
Sbjct  657   ENDPELAEIVTRYGDFLLHGIESTSMSKSFKAILLEALLELDGLRTPPTLATLAECSYTV  716

Query  900   lqrrrplladlpdiladTQDGTTTGWQRYWRENPVNAWIGGNQTRQKSQLFRVRS-DRFE  958
             + RR  L+A+     A    ++  +W  YWR+NP++A    N++ +++  F + S +RF 
Sbjct  717   IARRPDLMAEDLTENAKQFKAADKDWLNYWRNNPIKAF--TNKATKQATWFSIDSQQRFV  774

Query  959   PVFDVAPEQQETLTEMVQELIDYRLAAYEARRS-------TTASTDNVIPF-PQQRPDRT  1010
             + FD+  ++ E L + +QEL+D RLA Y  R          + S   VI++ P+Q+   T
Sbjct  775   ANFDIREQDLERLHDCIQELVDLRLAEYAQRPKQHKENLIKAKSKAAVISLIPEQKTIGT  834

Query  1011  ELPYFPNLRIACGHFRTARADAEEHRSVGTGYGRLDPARHFIARASGNSMNGGKNPIRDG  1070
              +P++P+L+IACGHF+ +     +   V  GYG LDP+RHF++ ASGNSMNGGKNPI+DG
Sbjct  835   PIPFYPELKIACGHFKRGSEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNGGKNPIQDG  894

Query  1071  DYLLLELVSPGNAGSITGSVMAIERQDRTGEDQYLLRVVTKQRDGSYVLVANNPDYEDIH  1130
             D LLLE V+P++AGSI+   MAIE QD TG++QYLLRVV K     Y L A+NP Y ++ 
Sbjct  895   DLLLLEWVTPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSYPNMP  954

Query  1131  VTPEMAEELRTLARLKAII  1149
              T    + ++T+ARLKA+I
Sbjct  955   AT----DAMKTFARLKAVI  969

19) I607_00525 in NC_021710


> NC_009457_P1|4|G4|147675167|YP_001216293.1|Vibrio_cholerae_O395|-|3585..6524|-|VC0395_A0337|DEAD/DEAH 
box helicase
Length=979

 Score =  648 bits (2448),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 440/972 (46%), Positives = 657/972 (68%), Gaps = 37/972 (3%)

Query  7    LVTGRNQQYLLHEIRDALKSATNIEIAVSFIRMSGLSLIIQDIEDAMNSEIRDVKLSLLT  66
            L +G  ++ LL  + +A++ AT+IEI+VSFI+ SGL L+++ + DA++S   + ++ LLT
Sbjct  15   LSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPLFDAVQS---GAQVKLLT  71

Query  67   SDYMNITEPHALKRLMLLKERGADIRIYESKQATSFHLKSYIFVKSSEDILISARAFVGS  126
            SDY++IT+P AL+RLMLL ERGA+ R++E  Q  SFH+KSYIFV+  ++ ++ + A +GS
Sbjct  72   SDYLSITHPVALRRLMLLTERGAQCRVFECGQ-HSFHMKSYIFVRCEQGEILEGCAWIGS  130

Query  127  SNISKTALTDGIEWNYRIDYPNDNdeeaiarideireQYSYLSTLPQVKPLTYDLIADYE  186
            +NISKTAL D+ EW  R D+   +   A   + +IR+Q++ +    + K LT   I +Y 
Sbjct  131  NNISKTALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKDLTHTWIDHYL  190

Query  187  IRYNTARVVTPIQSAASLPDEKEHEIPEPREHQVTALAALKQAREDGIKKGLVVLATGMG  246
             RY+ A+    +   A  +++ + E P P   QV AL+AL+ +R +G+ +GLVVLATGMG
Sbjct  191  ERYQQAKKQHGMPILAD-SQDEQSEPPAPNAVQVEALTALNATRAQGFSRGLVVLATGMG  249

Query  247  KTYLAAFDSVQVNAKKVLFVAHREEILLQAEASFLKIHPSKKVGRYSGKQKDEEYDFLFA  306
            KT LAAFD++Q ++ KVLFVAHREEILLQAE +F ++ P+ K G Y+G  ++ +  +LFA
Sbjct  250  KTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQNTQAMLLFA  309

Query  307  SIQTIGQSTHLAKFPTAAFDYIVVDEFHHAAAGGYQRLLEYFTPSFLLGLTATPTRTDGS  366
            S+ TIG+  HL +F++  FDYIVVDEFHHAAA +Y+ LL YF P FLLGLTATP R+D +
Sbjct  310  SVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLTATPERSDQA  369

Query  367  DILKLCDNNLIYQQDLFDGVKAEALCPFSYFGIFDKEVDYDHLPWRNGKFDPEKLSNKLA  426
            DIL LCD+NL+++++L +G+    L PF Y GI+D+ V+Y+++PWRNGKFDP+ L N LA
Sbjct  370  DILSLCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFDPDSLDNALA  429

Query  427  TKGRAKHVLTEWKVKSQDVSLAFCVSRKHADYMADYFNQQGITAASVHSDSSLTRSEALE  486
            T+ RA HV  +W  K Q  +LAFCVS+KHAD+MA++   +GI A +V SDS + R++AL+
Sbjct  430  TQRRAEHVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDSKVRRNQALQ  489

Query  487  KLNNGDIKILFSVDLFNEGVDLPKIDTVLMLRPTESKILFLQQMGRGLRKS--EGKDRLI  544
             L++G I ILFSVDLFNEG DLP IDT+LMLRPTESKILFLQQ+GRGLR+S    K +L+
Sbjct  490  WLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRSIETQKSKLV  549

Query  545  ILDFVGNHHSFLNRPEMLFASILDGPQNRRKMVDLAKNANKLLPDGCYVNFDLEFIDFLT  604
            ++DF+GNH+SFLNRP  L+          +    LAK+ ++ LPDGC V FD+ +++F  
Sbjct  550  VIDFIGNHDSFLNRPTTLYNV-------SHLKDALAKHQQQALPDGCHVTFDITLLNFWQ  602

Query  605  SISQD---ELDTQYDKLKETLGRRPTYTEFYKSGASLEKLRRNRGSWWEFVDSKGDLKAD  661
             +++     ++ +Y++L + L++RPT +EF+  G  + K+R++  SW ++V S+ +    
Sbjct  603  QLTRKMRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQEN--DP  660

Query  662  ELEVLEEHLQWF--KDLAVTRTSKCYKLVLLATLIEHKAFQSQVSVDDLAEWARQWFLDN  719
            EL  +  +   F   ++  T  SK +K +LL +L+E  ++++  ++  LAE +   +   
Sbjct  661  ELAEIVTRYGDFLLHGIESTSMSKSFKAILLEALLELDGLRTPPTLATLAECSYTVIARR  720

Query  720  PEWISDLPeskqqlsslskseWRAHWRSNPVK-FWCTEEPESKVAWFDISNQQFHFKQSI  778
            P+ +++    + +    +  +W   WR+NP+K F  T+ +  + +WF I +QQ +F  ++
Sbjct  721  PDLMAEDLTENAKQFKAADKDWLNYWRNNPIKAF--TNKATKQATWFSIDSQQ-RFVANF  777

Query  779  SAIQHDL--FLAMSVEINNQRLANY-----RHKKLAITAPSSNNIVQF-PEK----VQLP  826
               ++DL  +     E+ + RLA+Y     +HK   I A S   ++ + PE+      +P
Sbjct  778  DIREQDLERLHDCIQELVDLRLAEYAQRPKQHKENLIKAKSKAAVISLIPEQKTIGTPIP  837

Query  827  FFPDIKIACGHFKTGNAESSELVNVPYGYGNIDNSRHFIARASGNSMNGGKNPIYDGDYL  886
            F+P++KIACGHFK G+    +   VP GYG +D +RHF++ ASGNSMNGGKNPI DGD L
Sbjct  838  FYPELKIACGHFKRGSEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNGGKNPIQDGDLL  897

Query  887  LLEQITPNNAGSISNTTVAIERQDEMGDNQYLLRKVLKNPDGSYTLRAANPDYGDIIASE  946
            LLE +TP++AGSISN T+AIE QDE GDNQYLLR V K +   Y L+A NP Y ++ A++
Sbjct  898  LLEWVTPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSYPNMPATD  957

Query  947  EMVTFARLKGKV  958
             M TFARLK+ +
Sbjct  958  AMKTFARLKAVI  969

20) I876_00540 in NC_021717


> NC_009457_P1|4|G4|147675167|YP_001216293.1|Vibrio_cholerae_O395|-|3585..6524|-|VC0395_A0337|DEAD/DEAH 
box helicase
Length=979

 Score =  648 bits (2448),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 440/972 (46%), Positives = 657/972 (68%), Gaps = 37/972 (3%)

Query  7    LVTGRNQQYLLHEIRDALKSATNIEIAVSFIRMSGLSLIIQDIEDAMNSEIRDVKLSLLT  66
            L +G  ++ LL  + +A++ AT+IEI+VSFI+ SGL L+++ + DA++S   + ++ LLT
Sbjct  15   LSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPLFDAVQS---GAQVKLLT  71

Query  67   SDYMNITEPHALKRLMLLKERGADIRIYESKQATSFHLKSYIFVKSSEDILISARAFVGS  126
            SDY++IT+P AL+RLMLL ERGA+ R++E  Q  SFH+KSYIFV+  ++ ++ + A +GS
Sbjct  72   SDYLSITHPVALRRLMLLTERGAQCRVFECGQ-HSFHMKSYIFVRCEQGEILEGCAWIGS  130

Query  127  SNISKTALTDGIEWNYRIDYPNDNdeeaiarideireQYSYLSTLPQVKPLTYDLIADYE  186
            +NISKTAL D+ EW  R D+   +   A   + +IR+Q++ +    + K LT   I +Y 
Sbjct  131  NNISKTALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKDLTHTWIDHYL  190

Query  187  IRYNTARVVTPIQSAASLPDEKEHEIPEPREHQVTALAALKQAREDGIKKGLVVLATGMG  246
             RY+ A+    +   A  +++ + E P P   QV AL+AL+ +R +G+ +GLVVLATGMG
Sbjct  191  ERYQQAKKQHGMPILAD-SQDEQSEPPAPNAVQVEALTALNATRAQGFSRGLVVLATGMG  249

Query  247  KTYLAAFDSVQVNAKKVLFVAHREEILLQAEASFLKIHPSKKVGRYSGKQKDEEYDFLFA  306
            KT LAAFD++Q ++ KVLFVAHREEILLQAE +F ++ P+ K G Y+G  ++ +  +LFA
Sbjct  250  KTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQNTQAMLLFA  309

Query  307  SIQTIGQSTHLAKFPTAAFDYIVVDEFHHAAAGGYQRLLEYFTPSFLLGLTATPTRTDGS  366
            S+ TIG+  HL +F++  FDYIVVDEFHHAAA +Y+ LL YF P FLLGLTATP R+D +
Sbjct  310  SVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLTATPERSDQA  369

Query  367  DILKLCDNNLIYQQDLFDGVKAEALCPFSYFGIFDKEVDYDHLPWRNGKFDPEKLSNKLA  426
            DIL LCD+NL+++++L +G+    L PF Y GI+D+ V+Y+++PWRNGKFDP+ L N LA
Sbjct  370  DILSLCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFDPDSLDNALA  429

Query  427  TKGRAKHVLTEWKVKSQDVSLAFCVSRKHADYMADYFNQQGITAASVHSDSSLTRSEALE  486
            T+ RA HV  +W  K Q  +LAFCVS+KHAD+MA++   +GI A +V SDS + R++AL+
Sbjct  430  TQRRAEHVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDSKVRRNQALQ  489

Query  487  KLNNGDIKILFSVDLFNEGVDLPKIDTVLMLRPTESKILFLQQMGRGLRKS--EGKDRLI  544
             L++G I ILFSVDLFNEG DLP IDT+LMLRPTESKILFLQQ+GRGLR+S    K +L+
Sbjct  490  WLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRSIETQKSKLV  549

Query  545  ILDFVGNHHSFLNRPEMLFASILDGPQNRRKMVDLAKNANKLLPDGCYVNFDLEFIDFLT  604
            ++DF+GNH+SFLNRP  L+          +    LAK+ ++ LPDGC V FD+ +++F  
Sbjct  550  VIDFIGNHDSFLNRPTTLYNV-------SHLKDALAKHQQQALPDGCHVTFDITLLNFWQ  602

Query  605  SISQD---ELDTQYDKLKETLGRRPTYTEFYKSGASLEKLRRNRGSWWEFVDSKGDLKAD  661
             +++     ++ +Y++L + L++RPT +EF+  G  + K+R++  SW ++V S+ +    
Sbjct  603  QLTRKMRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQEN--DP  660

Query  662  ELEVLEEHLQWF--KDLAVTRTSKCYKLVLLATLIEHKAFQSQVSVDDLAEWARQWFLDN  719
            EL  +  +   F   ++  T  SK +K +LL +L+E  ++++  ++  LAE +   +   
Sbjct  661  ELAEIVTRYGDFLLHGIESTSMSKSFKAILLEALLELDGLRTPPTLATLAECSYTVIARR  720

Query  720  PEWISDLPeskqqlsslskseWRAHWRSNPVK-FWCTEEPESKVAWFDISNQQFHFKQSI  778
            P+ +++    + +    +  +W   WR+NP+K F  T+ +  + +WF I +QQ +F  ++
Sbjct  721  PDLMAEDLTENAKQFKAADKDWLNYWRNNPIKAF--TNKATKQATWFSIDSQQ-RFVANF  777

Query  779  SAIQHDL--FLAMSVEINNQRLANY-----RHKKLAITAPSSNNIVQF-PEK----VQLP  826
               ++DL  +     E+ + RLA+Y     +HK   I A S   ++ + PE+      +P
Sbjct  778  DIREQDLERLHDCIQELVDLRLAEYAQRPKQHKENLIKAKSKAAVISLIPEQKTIGTPIP  837

Query  827  FFPDIKIACGHFKTGNAESSELVNVPYGYGNIDNSRHFIARASGNSMNGGKNPIYDGDYL  886
            F+P++KIACGHFK G+    +   VP GYG +D +RHF++ ASGNSMNGGKNPI DGD L
Sbjct  838  FYPELKIACGHFKRGSEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNGGKNPIQDGDLL  897

Query  887  LLEQITPNNAGSISNTTVAIERQDEMGDNQYLLRKVLKNPDGSYTLRAANPDYGDIIASE  946
            LLE +TP++AGSISN T+AIE QDE GDNQYLLR V K +   Y L+A NP Y ++ A++
Sbjct  898  LLEWVTPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSYPNMPATD  957

Query  947  EMVTFARLKGKV  958
             M TFARLK+ +
Sbjct  958  AMKTFARLKAVI  969

21) I634_00530 in NC_021712


> NC_009457_P1|4|G4|147675167|YP_001216293.1|Vibrio_cholerae_O395|-|3585..6524|-|VC0395_A0337|DEAD/DEAH 
box helicase
Length=979

 Score =  648 bits (2448),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 440/972 (46%), Positives = 657/972 (68%), Gaps = 37/972 (3%)

Query  7    LVTGRNQQYLLHEIRDALKSATNIEIAVSFIRMSGLSLIIQDIEDAMNSEIRDVKLSLLT  66
            L +G  ++ LL  + +A++ AT+IEI+VSFI+ SGL L+++ + DA++S   + ++ LLT
Sbjct  15   LSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPLFDAVQS---GAQVKLLT  71

Query  67   SDYMNITEPHALKRLMLLKERGADIRIYESKQATSFHLKSYIFVKSSEDILISARAFVGS  126
            SDY++IT+P AL+RLMLL ERGA+ R++E  Q  SFH+KSYIFV+  ++ ++ + A +GS
Sbjct  72   SDYLSITHPVALRRLMLLTERGAQCRVFECGQ-HSFHMKSYIFVRCEQGEILEGCAWIGS  130

Query  127  SNISKTALTDGIEWNYRIDYPNDNdeeaiarideireQYSYLSTLPQVKPLTYDLIADYE  186
            +NISKTAL D+ EW  R D+   +   A   + +IR+Q++ +    + K LT   I +Y 
Sbjct  131  NNISKTALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKDLTHTWIDHYL  190

Query  187  IRYNTARVVTPIQSAASLPDEKEHEIPEPREHQVTALAALKQAREDGIKKGLVVLATGMG  246
             RY+ A+    +   A  +++ + E P P   QV AL+AL+ +R +G+ +GLVVLATGMG
Sbjct  191  ERYQQAKKQHGMPILAD-SQDEQSEPPAPNAVQVEALTALNATRAQGFSRGLVVLATGMG  249

Query  247  KTYLAAFDSVQVNAKKVLFVAHREEILLQAEASFLKIHPSKKVGRYSGKQKDEEYDFLFA  306
            KT LAAFD++Q ++ KVLFVAHREEILLQAE +F ++ P+ K G Y+G  ++ +  +LFA
Sbjct  250  KTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQNTQAMLLFA  309

Query  307  SIQTIGQSTHLAKFPTAAFDYIVVDEFHHAAAGGYQRLLEYFTPSFLLGLTATPTRTDGS  366
            S+ TIG+  HL +F++  FDYIVVDEFHHAAA +Y+ LL YF P FLLGLTATP R+D +
Sbjct  310  SVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLTATPERSDQA  369

Query  367  DILKLCDNNLIYQQDLFDGVKAEALCPFSYFGIFDKEVDYDHLPWRNGKFDPEKLSNKLA  426
            DIL LCD+NL+++++L +G+    L PF Y GI+D+ V+Y+++PWRNGKFDP+ L N LA
Sbjct  370  DILSLCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFDPDSLDNALA  429

Query  427  TKGRAKHVLTEWKVKSQDVSLAFCVSRKHADYMADYFNQQGITAASVHSDSSLTRSEALE  486
            T+ RA HV  +W  K Q  +LAFCVS+KHAD+MA++   +GI A +V SDS + R++AL+
Sbjct  430  TQRRAEHVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDSKVRRNQALQ  489

Query  487  KLNNGDIKILFSVDLFNEGVDLPKIDTVLMLRPTESKILFLQQMGRGLRKS--EGKDRLI  544
             L++G I ILFSVDLFNEG DLP IDT+LMLRPTESKILFLQQ+GRGLR+S    K +L+
Sbjct  490  WLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRSIETQKSKLV  549

Query  545  ILDFVGNHHSFLNRPEMLFASILDGPQNRRKMVDLAKNANKLLPDGCYVNFDLEFIDFLT  604
            ++DF+GNH+SFLNRP  L+          +    LAK+ ++ LPDGC V FD+ +++F  
Sbjct  550  VIDFIGNHDSFLNRPTTLYNV-------SHLKDALAKHQQQALPDGCHVTFDITLLNFWQ  602

Query  605  SISQD---ELDTQYDKLKETLGRRPTYTEFYKSGASLEKLRRNRGSWWEFVDSKGDLKAD  661
             +++     ++ +Y++L + L++RPT +EF+  G  + K+R++  SW ++V S+ +    
Sbjct  603  QLTRKMRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQEN--DP  660

Query  662  ELEVLEEHLQWF--KDLAVTRTSKCYKLVLLATLIEHKAFQSQVSVDDLAEWARQWFLDN  719
            EL  +  +   F   ++  T  SK +K +LL +L+E  ++++  ++  LAE +   +   
Sbjct  661  ELAEIVTRYGDFLLHGIESTSMSKSFKAILLEALLELDGLRTPPTLATLAECSYTVIARR  720

Query  720  PEWISDLPeskqqlsslskseWRAHWRSNPVK-FWCTEEPESKVAWFDISNQQFHFKQSI  778
            P+ +++    + +    +  +W   WR+NP+K F  T+ +  + +WF I +QQ +F  ++
Sbjct  721  PDLMAEDLTENAKQFKAADKDWLNYWRNNPIKAF--TNKATKQATWFSIDSQQ-RFVANF  777

Query  779  SAIQHDL--FLAMSVEINNQRLANY-----RHKKLAITAPSSNNIVQF-PEK----VQLP  826
               ++DL  +     E+ + RLA+Y     +HK   I A S   ++ + PE+      +P
Sbjct  778  DIREQDLERLHDCIQELVDLRLAEYAQRPKQHKENLIKAKSKAAVISLIPEQKTIGTPIP  837

Query  827  FFPDIKIACGHFKTGNAESSELVNVPYGYGNIDNSRHFIARASGNSMNGGKNPIYDGDYL  886
            F+P++KIACGHFK G+    +   VP GYG +D +RHF++ ASGNSMNGGKNPI DGD L
Sbjct  838  FYPELKIACGHFKRGSEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNGGKNPIQDGDLL  897

Query  887  LLEQITPNNAGSISNTTVAIERQDEMGDNQYLLRKVLKNPDGSYTLRAANPDYGDIIASE  946
            LLE +TP++AGSISN T+AIE QDE GDNQYLLR V K +   Y L+A NP Y ++ A++
Sbjct  898  LLEWVTPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSYPNMPATD  957

Query  947  EMVTFARLKGKV  958
             M TFARLK+ +
Sbjct  958  AMKTFARLKAVI  969

22) AMEC673_00440 in NC_018678


> NC_009457_P1|4|G4|147675167|YP_001216293.1|Vibrio_cholerae_O395|-|3585..6524|-|VC0395_A0337|DEAD/DEAH 
box helicase
Length=979

 Score =  639 bits (2415),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 444/975 (46%), Positives = 663/975 (68%), Gaps = 43/975 (4%)

Query  7    LVTGRNKQYLLHEIRDALKNATSIEIAVSFIRMSGLSLIIQDIEDAMNSEERNVKLSLLT  66
            L +G  ++ LL  + +A+++AT IEI+VSFI+ SGL L+++ + DA++S     ++ LLT
Sbjct  15   LSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPLFDAVQS---GAQVKLLT  71

Query  67   SDYMNITEPQALKRLMLLKERGAEIQIFESKQATSFHLKSYIFVKNSGKTLTSARAFVGS  126
            SDY++IT+P AL+RLMLL ERGA+ ++FE  Q  SFH+KSYIFV+     +  + A +GS
Sbjct  72   SDYLSITHPVALRRLMLLTERGAQCRVFECGQ-HSFHMKSYIFVRCEQGEILEGCAWIGS  130

Query  127  SNISKTALTDGIEWNYRIDYPNDNDreaiarieeireQYRYLFTLPQVKPLTYDLIADYE  186
            +NISKTAL D+ EW  R D+   +   A   + +IR+Q+  +F   + K LT   I +Y 
Sbjct  131  NNISKTALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKDLTHTWIDHYL  190

Query  187  IRYNTARVVTPTHSAASLPD--EKEHEIPEPREHQVTALAALKQARVGGIQKGLVVLATG  244
             RY+ A+     H+ + L+D  + + E P P   QV AL+AL+ +R  G+ +GLVVLATG
Sbjct  191  ERYQQAK---KQHGMPILADSQDEQSEPPAPNAVQVEALTALNATRAQGFSRGLVVLATG  247

Query  245  MGKTYLAAFDVAQVKAKKVLFVAHREEILLQAEASFLKIHPNKKVGRYSGRQKDEEYDFL  304
            MGKT LAAFD  Q ++ KVLFVAHREEILLQAE +F ++ PN K G Y+G  ++ +  +L
Sbjct  248  MGKTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQNTQAMLL  307

Query  305  FASIQTIGQSSHLAKFPAVAFDYIVVDEFHHAAAGGYQRLLEHFTPSFLLGLTATPNRTD  364
            FAS+ TIG+ +HL +F+A  FDYIVVDEFHHAAA +Y+ LL  F P FLLGLTATP+R+D
Sbjct  308  FASVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLTATPERSD  367

Query  365  GSDILELCDKNLIYQQDLFDGVKADVLCPFSYFGIFDKEVDYEHLPWRNGKFAPEKLSNK  424
             +DIL LCD NL+++++L +G+   +L PF Y GI+D+ V+Y+++PWRNGKF P+ L N 
Sbjct  368  QADILSLCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFDPDSLDNA  427

Query  425  LATKGRAKHVFTEWKSKSQDVSLAFCVSRKHADYMADYFNQQGVAAASVHSDSSLTRSEA  484
            LAT+ RA HV+ +W  K Q  +LAFCVS+KHAD+MA++   +G+ A +V SDS + R++A
Sbjct  428  LATQRRAEHVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDSKVRRNQA  487

Query  485  LEKLNNGKIKILFSVDLFNEGVDLPKIDTVLMLRPTESKILFLQQMGRGLRKS--EGKDR  542
            L+ L++GKI ILFSVDLFNEG DLP IDT+LMLRPTESKILFLQQ+GRGLR+S    K +
Sbjct  488  LQWLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRSIETQKSK  547

Query  543  LIILDFVGNHHSFLNRPEMLLASIIDGSQGRKKMVDLAKNANKLLPAGCYVNFDLEFIDF  602
            L+++DF+GNH+SFLNRP    +++ + S+ +     LAK+ ++ LP GC V FD+ +++F
Sbjct  548  LVVIDFIGNHDSFLNRP----TTLYNVSHLKD---ALAKHQQQALPDGCHVTFDITLLNF  600

Query  603  LTSISND---ELDIQYDRLKETLGRRPTYTEFYQSGASLEKLRRNRGSWWEFVDSKGDLE  659
               ++      ++ +Y++L + L++RPT +EF+  G  + K+R++  SW ++V S+ + +
Sbjct  601  WQQLTRKMRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLVASQEN-D  659

Query  660  ADELEVLE--GHLQWFKDLAVTRTSKCYKLVLLATLIEHKAFQSQVSVDVLAEWARQWFL  717
            ++  E++   G++  + ++  T  SK +K +LL +L+E  ++++  ++  LAE +   + 
Sbjct  660  PELAEIVTRYGDFL-LHGIESTSMSKSFKAILLEALLELDGLRTPPTLATLAECSYTVIA  718

Query  718  DNPEWIS-DLPESKQQLASLSKLEWRAHWRSNPIK-FWCTEEPESKIAWFNISNQYFHFK  775
              P+ ++ DL E+ +Q+ +  K +W   WR+NPIK F  T+ +  + +WF+I +Q  +F 
Sbjct  719  RRPDLMAEDLTENAKQFKAADK-DWLNYWRNNPIKAF--TNKATKQATWFSIDSQQ-RFV  774

Query  776  QSITAIQHVL--FLAMTVEVNNQRLAYY-----RHKKLAITAPSSNNIVQF-PEK----V  823
             ++   ++ L  +     E+ + RLA Y     +HK   I A S   ++ + PE+     
Sbjct  775  ANFDIREQDLERLHDCIQELVDLRLAEYAQRPKQHKENLIKAKSKAAVISLIPEQKTIGT  834

Query  824  QLPFFPDIKIACGHFKTGNAEASELVNAPYGYGNIDNSRHFIARASGNSMNGGKNPIYDG  883
             +PF+P++KIACGHFK G+    +    P GYG +D +RHF++ ASGNSMNGGKNPI DG
Sbjct  835  PIPFYPELKIACGHFKRGSEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNGGKNPIQDG  894

Query  884  DYLLLEQITPNNAGSISNTIVAIERQDETGDNQYLLRKVLKNPDGSYILRAANPDYDDLI  943
            D LLLE +TP++AGSISN  +AIE QDETGDNQYLLR V K +   Y L+A NP Y ++ 
Sbjct  895  DLLLLEWVTPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSYPNMP  954

Query  944  ASEEMVTFARLKGKV  958
            A++ M TFARLK+ +
Sbjct  955  ATDAMKTFARLKAVI  969

23) hsdR3 in NC_012108


> NC_009457_P1|4|G4|147675167|YP_001216293.1|Vibrio_cholerae_O395|-|3585..6524|-|VC0395_A0337|DEAD/DEAH 
box helicase
Length=979

 Score =  500 bits (1885),  Expect = 3e-142, Method: Compositional matrix adjust.
 Identities = 345/838 (42%), Positives = 545/838 (66%), Gaps = 44/838 (5%)

Query  9    LISGGTADPLLPHLLQAIDKATAIQMAVSFTRMSGLRLISSALEEALARKVPFEFLTSDY  68
            L SGG+ DPLLP+L+QAI+ AT I+++VSF + SGL L+  +L +A+       +LTSDY
Sbjct  15   LSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGLDLLFDPLFDAVQSGAQVKLLTSDY  74

Query  69   LDVTEPAALRRLMLLHEAGADVRIHACHNGGAFHTKAYIFIRNDR----EGIAFIGSSNL  124
            L +T+P ALRRLMLL E GA+ R+  C    +FH K+YIF+R ++    EG A IGS+N+
Sbjct  75   LSITHPVALRRLMLLTERGAQCRVFEC-GQHSFHMKSYIFVRCEQGEILEGCAWIGSNNI  133

Query  125  SESALTQGIEWNL-----CIDSCQTPSAFVQACTSFSQLFNKTTTLGLSWDWIEQY----  175
            S +AL ++ EW L       ++  ++  F++    F+ +FN T + +L+  WI++Y    
Sbjct  134  SKTALLDSHEWALRHDFEPPETSAAALEFLHIRQQFASIFNHTNSKDLTHTWIDHYLERY  193

Query  176  ----EQRRVPIELPDSEIppplpaphpIQERALEALRDSRNNGLQRALVVMATGVGKTWL  231
                 Q+ +PI     +  +  PAP+++Q  AL AL  +R +G+ R+LVV+ATG+GKTWL
Sbjct  194  QQAKKQHGMPILADSQDEQSEPPAPNAVQVEALTALNATRAQGFSRGLVVLATGMGKTWL  253

Query  232  AVFDILRNGFGRVLFVAHREEILSQAASTFLTVNPRMKVGFFHGNEKSEDADILFGSVQS  291
            A FD L+    +VLFVAHREEIL QA  TF  + P  K G+++G  ++ +A +LF+SV +
Sbjct  254  AAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQNTQAMLLFASVAT  313

Query  292  LGKKIHLKKFDRTAFDYIVIDEFHHASAASYQNILNYFTPSFLLGLTATPERSDGRDIEA  351
            +GK+ HL++F    FDYIV+DEFHHA+A SY+N+L YF P FLLGLTATPERSD  DI +
Sbjct  314  IGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLTATPERSDQADILS  373

Query  352  FCDNNVAFRFDLTEAIEAGRLCPFTYFGIYDRHVDYELIPWRSRRFDPAEIETAFETQAR  411
            +CD+N+ F  +L ++I+   L PF Y GIYD+ V+Y+ IPWR+ +FDP  ++ A+ TQ R
Sbjct  374  LCDSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFDPDSLDNALATQRR  433

Query  412  ALQIFEEWTEKGQSRTLGFCVSIHHADFMASFFSGKGVKAVSVHSKSMVRRHDAIDRLSN  471
            A +++++W +K Q+RTL+FCVS  HADFMA F  +KG+KA++V S S VRR++A+++L +
Sbjct  434  AEHVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDSKVRRNQALQWLDS  493

Query  472  GLLQIIFCVDLFNEGVDIPGIDTVLMVRPTESPVVYLQQLGRGLR--LKDGKERLVVIDF  529
            G ++I+F VDLFNEG D+P+IDT+LM+RPTES +++LQQLGRGLR  +   K +LVVIDF
Sbjct  494  GKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRSIETQKSKLVVIDF  553

Query  530  IGNHRSFLQGPQALFGLQPGSPAFVDALKSFQKGTFALPPGCKLHMDLEVIDVFKKMTRI  589
            IGNH SFL+ P +L+ +    + + DAL   Q+   ALP GC +  D+ +++  +++TR 
Sbjct  554  IGNHDSFLNRPTTLYNV----SHLKDALAKHQQQ--ALPDGCHVTFDITLLNFWQQLTRK  607

Query  590  NR-NPNRIYEYLSELNGRRPTALEMSHYGITFAAIRRTHGSWLQMLYAKADLEPDIFQQL  648
             R + +  Y+ L++  ++RPTA E    GI ++ +R+   SW++++ A  + +P++ + +
Sbjct  608  MRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWFHLV-ASQENDPELAEIV  666

Query  649  FSHIGF-FREMEKTALTKCFKLITLEAMIELNGFMEPPGTAILADKalavllrrpvllHD  707
                +F ++ +E T+++K FK I LEA++EL+G+  PP  A LA+              D
Sbjct  667  TRYGDFLLHGIESTSMSKSFKAILLEALLELDGLRTPPTLATLAE----CSYTVIARRPD  722

Query  708  IHAKFAPHEKIRFSKAD-EWHRYWLDNPVNALIGGNLSGRKQKQNVFFSV-ADGKFVYKN  765
            + A    ++  +F  AD +W  YW +NP++A     ++ +  KQ   FS+ ++ +FV + 
Sbjct  723  LMAEDLTENAKQFKAADKDWLNYWRNNPIKA-----FTNKATKQATWFSIDSQQRFVANF  777

Query  766  PVAPEAQELFESLLQEIVNCRLVGYNPAVAKIQAVVCKLIRS-GTAPIIKLNDSLRPV  822
             +  +  E ++  +QE+V+ RL  Y     + +    +LI++ + A++I L    + +
Sbjct  778  DIREQDLERLHDCIQELVDLRLAEYAQRPKQHKE---NLIKAKSKAAVISLIPEQKTI  832