Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of SSU05_0906 gene of NC_009442_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SSU05_0906
( YP_001198272.1 )

NisK

NC_009442
(Streptococcus suis 05ZYH33)

6e-106

100

2) smi_0309
( YP_003445449.1 )

histidine kinase

NC_013853
(Streptococcus mitis B6)

3e-52

• Sequence Alignments

1) SSU05_0906 in NC_009442


> NC_009442_P1|4|G4|146318560|YP_001198272.1|Streptococcus_suis_05ZYH33|-|2674..3381|-|SSU05_0906|NisK
Length=235

 Score =  376 bits (1413),  Expect = 6e-106, Method: Compositional matrix adjust.
 Identities = 235/235 (100%), Positives = 235/235 (100%), Gaps = 0/235 (0%)

Query  1    MERKLDFKTLVKKTQWTIIKQFCLSVIVAYIFPISTISIDIHSETQLIASDLLGIFFNVF  60
            MERKLDFKTLVKKTQWTIIKQFCLSVIVAYIFPISTISIDIHSETQLIASDLLGIFFNVF
Sbjct  1    MERKLDFKTLVKKTQWTIIKQFCLSVIVAYIFPISTISIDIHSETQLIASDLLGIFFNVF  60

Query  61   SWVYICISLIIIVSVNIKALLKRVKQEMEIVYHGSMWLTSVNTSSKLTILEFIETNKHIE  120
            SWVYICISLIIIVSVNIKALLKRVKQEMEIVYHGSMWLTSVNTSSKLTILEFIETNKHIE
Sbjct  61   SWVYICISLIIIVSVNIKALLKRVKQEMEIVYHGSMWLTSVNTSSKLTILEFIETNKHIE  120

Query  121  LMQQRIKNMIQVEKDQKEDILFKVSAMAHDLKTPLTVIKGNSELLQFAPLSGIDVQCLRD  180
            LMQQRIKNMIQVEKDQKEDILFKVSAMAHDLKTPLTVIKGNSELLQFAPLSGIDVQCLRD
Sbjct  121  LMQQRIKNMIQVEKDQKEDILFKVSAMAHDLKTPLTVIKGNSELLQFAPLSGIDVQCLRD  180

Query  181  IERASNQLDNYFNQLINYSKTFYSNQISFHQYSISNLSKIMEQECAYLIGDNIDY  235
            IERASNQLDNYFNQLINYSKTFYSNQISFHQYSISNLSKIMEQECAYLIGDNIDY
Sbjct  181  IERASNQLDNYFNQLINYSKTFYSNQISFHQYSISNLSKIMEQECAYLIGDNIDY  235

2) smi_0309 in NC_013853


> NC_009442_P1|4|G4|146318560|YP_001198272.1|Streptococcus_suis_05ZYH33|-|2674..3381|-|SSU05_0906|NisK
Length=235

 Score =  198 bits (737),  Expect = 3e-52, Method: Compositional matrix adjust.
 Identities = 109/236 (47%), Positives = 179/236 (76%), Gaps = 2/236 (0%)

Query  1    MGRIKSFRQLIRETCWRIIWQFSLGVLMAYLIPLASVSIQINEDGKHLNNSGVLSIFFNV  60
            M R   F+ L++ T W II QF L+V++AY++P++++SI+I+ +  +L  S++L+IFFNV
Sbjct  1    MERKLDFKTLVKKTQWTIIKQFCLSVIVAYIFPISTISIDIHSET-QLIASDLLGIFFNV  59

Query  61   SSWIYICVLLIVLISYHIGKLLKKLSYEMTLIYENSMWLKK-ECTESLTVKEFRETGNRI  119
             SW+YIC+ LI+++S +I  LLK++  EM ++Y+ SMWL   + +  LT+ EF ET ++I
Sbjct  60   FSWVYICISLIIIVSVNIKALLKRVKQEMEIVYHGSMWLTSVNTSSKLTILEFIETNKHI  119

Query  120  IVMQDRIRQLIVDEKQQKEDLMFQVSAASHDLKTPLTIIRGNVEFLQAITENDQSQECLA  179
             +MQ+RI+++I  EK+QKED++F+VSA +HDLKTPLT+I+GN E+LQ    ++   +CL 
Sbjct  120  ELMQQRIKNMIQVEKDQKEDILFKVSAMAHDLKTPLTVIKGNSELLQFAPLSGIDVQCLR  179

Query  180  DIERASQQLLDYFNQLIHYSKTYYDDETGWTEYSSSDFINELEKEVSFLIKNQMKF  235
            DIERAS+QL +YFNQLI+YSKT+Y ++ +  +YS S++ + +E+E ++LI +++ +
Sbjct  180  DIERASNQLDNYFNQLINYSKTFYSNQISFHQYSISNLSKIMEQECAYLIGDNIDY  235