Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
RtrR protein |
NC_005773 (Pseudomonas syringae 1448A) |
1e-25 |
91 |
|
hypothetical protein |
NC_009656 (Pseudomonas aeruginosa PA7) |
6e-25 |
87 |
|
transcriptional regulator |
NC_019936 (Pseudomonas stutzeri RCH2) |
2e-24 |
87 |
|
hypothetical protein |
NC_018028 (Pseudomonas stutzeri CCUG 29243) |
3e-24 |
84 |
|
hypothetical protein |
NC_020829 (Pseudomonas denitrificans ATCC 13867) |
1e-22 |
83 |
|
transcriptional regulator |
NC_017532 (Pseudomonas stutzeri DSM 4166) |
3e-19 |
87 |
|
Cro/CI family transcriptional regulator |
NC_009434 (Pseudomonas stutzeri A1501) |
1e-17 |
76 |
|
putative transcriptional regulator |
NC_020888 (Thalassolituus oleivorans MIL-1) |
2e-17 |
68 |
|
helix-turn-helix domain-containing protein |
NC_017579 (Shewanella baltica OS117) |
2e-14 |
54 |
|
XRE family transcriptional regulator |
NC_009052 (Shewanella baltica OS155) |
2e-14 |
54 |
|
transcriptional regulator Cro/CI family |
NC_004347 (Shewanella oneidensis MR-1) |
4e-14 |
54 |
|
transcriptional regulator, XRE family protein |
NC_021290 (Aeromonas hydrophila ML09-119) |
1e-13 |
61 |
|
transcriptional regulator, XRE family protein |
NC_008345 (Shewanella frigidimarina NCIMB 400) |
3e-13 |
61 |
|
XRE family transcriptional regulator |
NC_010334 (Shewanella halifaxensis HAW-EB4) |
3e-13 |
62 |
|
XRE family transcriptional regulator |
NC_009665 (Shewanella baltica OS185) |
6e-13 |
61 |
|
XRE family transcriptional regulator |
NC_009997 (Shewanella baltica OS195) |
6e-13 |
61 |
|
helix-turn-helix domain-containing protein |
NC_016901 (Shewanella baltica OS678) |
6e-13 |
61 |
|
hypothetical protein |
NC_021733 (Acinetobacter baumannii BJAB0715) |
6e-13 |
59 |
|
XRE family transcriptional regulator |
NC_010506 (Shewanella woodyi ATCC 51908) |
1e-12 |
59 |
|
helix-turn-helix domain-containing protein |
NC_009438 (Shewanella putrefaciens CN-32) |
3e-12 |
56 |
|
XRE family transcriptional regulator |
NC_009901 (Shewanella pealeana ATCC 700345) |
1e-11 |
59 |
|
XRE family transcriptional regulator |
NC_009901 (Shewanella pealeana ATCC 700345) |
1e-11 |
59 |
|
helix-turn-helix domain-containing protein |
NC_009654 (Marinomonas sp. MWYL1) |
8e-11 |
54 |
|
XRE family transcriptional regulator |
NC_008740 (Marinobacter aquaeolei VT8) |
9e-11 |
52 |
|
Helix-turn-helix. |
NC_021021 (Gordonibacter pamelaeae 7-10-1-bT) |
2e-09 |
47 |
|
Cro/CI family transcriptional regulator |
NC_018868 (Simiduia agarivorans SA1) |
3e-09 |
50 |
|
putative transcriptional regulator |
NC_021499 (Pseudomonas resinovorans NBRC 106553) |
4e-09 |
53 |
|
XRE family transcriptional regulator |
NC_010571 (Opitutus terrae PB90-1) |
2e-08 |
44 |
|
hypothetical protein |
NC_006368 (Legionella pneumophila Paris) |
3e-08 |
41 |
|
Cro/Ci family transcriptional regulator |
NC_015379 (Pseudomonas brassicacearum NFM421) |
3e-08 |
47 |
|
XRE family transcriptional regulator |
NC_009439 (Pseudomonas mendocina ymp) |
4e-08 |
52 |
|
XRE family transcriptional regulator |
NC_010322 (Pseudomonas putida GB-1) |
1e-07 |
46 |
|
Regulatory protein munI |
NC_018139 (Legionella pneumophila Lorraine) |
1e-07 |
43 |
|
putative transcriptional regulator |
NC_014226 (Waddlia chondrophila WSU 86-1044) |
1e-07 |
41 |
|
transcriptional regulator |
NC_008260 (Alcanivorax borkumensis SK2) |
2e-07 |
42 |
|
putative transcriptional regulator, HTH-XRE family |
NC_016586 (Azospirillum lipoferum 4B) |
2e-07 |
44 |
|
XRE family transcriptional regulator |
NC_013416 (Aggregatibacter actinomycetemcomitans D11S-1) |
3e-07 |
46 |
|
regulatory protein |
NC_010688 (Xanthomonas campestris B100) |
4e-07 |
42 |
|
XRE family transcriptional regulator |
NC_011567 (Anoxybacillus flavithermus WK1) |
5e-07 |
42 |
|
helix-turn-helix domain-containing protein |
NC_009674 (Bacillus cytotoxicus NVH 391-98) |
6e-07 |
47 |
|
hypothetical protein |
NC_015174 (Planctomyces brasiliensis DSM 5305) |
8e-07 |
42 |
|
hypothetical protein |
NC_015174 (Planctomyces brasiliensis DSM 5305) |
8e-07 |
42 |
|
XRE family transcriptional regulator |
NC_013132 (Chitinophaga pinensis DSM 2588) |
9e-07 |
43 |
|
HTH domain-containing protein, XRE family |
NC_020386 (Dehalococcoides mccartyi DCMB5) |
3e-06 |
44 |
|
XRE family transcriptional regulator |
NC_009455 (Dehalococcoides sp. BAV1) |
3e-06 |
44 |
|
XRE family transcriptional regulator |
NC_009455 (Dehalococcoides sp. BAV1) |
3e-06 |
44 |
|
XRE family transcriptional regulator |
NC_013890 (Dehalococcoides sp. GT) |
3e-06 |
44 |
|
XRE family transcriptional regulator |
NC_009441 (Flavobacterium johnsoniae UW101) |
8e-06 |
41 |
|
Helix-turn-helix. |
NC_021017 (Bacteroides xylanisolvens XB1A) |
1e-05 |
45 |
|
similar to transcription regulator and to restriction enzyme contro elements |
NC_012962 (Photorhabdus asymbiotica ATCC 43949) |
1e-05 |
41 |
|
XRE family transcriptional regulator |
NC_015677 (Ramlibacter tataouinensis TTB310) |
3e-05 |
48 |
|
XRE family transcriptional regulator |
NC_011726 (Cyanothece sp. PCC 8801) |
8e-05 |
42 |
|
XRE family transcriptional regulator |
NC_013161 (Cyanothece sp. PCC 8802) |
8e-05 |
42 |
|
hypothetical protein |
NC_005126 (Photorhabdus luminescens TTO1) |
8e-05 |
42 |
|
putative transcriptional regulator |
NC_020541 (Rhodanobacter sp. 2APBS1) |
2e-04 |
41 |
|
helix-turn-helix protein |
NC_015730 (Roseobacter litoralis Och 149) |
2e-04 |
43 |
|
XRE family transcriptional regulator |
NC_013739 (Conexibacter woesei DSM 14684) |
2e-04 |
41 |
|
XRE family transcriptional regulator |
NC_018696 (Burkholderia phenoliruptrix BR3459a) |
3e-04 |
42 |
|
helix-turn-helix domain-containing protein |
NC_015389 (Coriobacterium glomerans PW2) |
0.002 |
44 |
|
hypothetical protein |
NC_009494 (Legionella pneumophila Corby) |
0.003 |
41 |
|
hypothetical protein |
NC_014125 (Legionella pneumophila 2300/99 Alcoy) |
0.004 |
41 |
|
putative transcriptional regulator |
NC_018065 (Solibacillus silvestris StLB046) |
0.018 |
47 |
|
transcriptional regulator |
NC_013165 (Slackia heliotrinireducens DSM 20476) |
0.29 |
42 |
|
hypothetical protein |
NC_017731 (Providencia stuartii MRSN 2154) |
0.31 |
42 |
|
XRE family transcriptional regulator |
NC_013440 (Haliangium ochraceum DSM 14365) |
0.55 |
41 |
|
XRE family transcriptional regulator |
NC_013440 (Haliangium ochraceum DSM 14365) |
0.59 |
41 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='EF611303' AND ph.id_pai_orf='4' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc