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Homologs of unnamed gene of AY233333

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) CKO_00897
( YP_001452483.1 )

hypothetical protein

NC_009792
(Citrobacter koseri ATCC BAA-895)

1e-25

100

2) ECED1_2262
( YP_002398201.1 )

putative type IV secretory pathway VirB2 component

NC_011745
(Escherichia coli ED1a)

1e-25

100

3) ECUMN_2285
( YP_002413003.1 )

putative type IV secretory pathway VirB2 component

NC_011751
(Escherichia coli UMN026)

1e-25

100

4) virB2
( YP_002920280.1 )

type IV secretory pathway VirB2 component

NC_012731
(Klebsiella pneumoniae NTUH-K2044)

1e-25

100

5) Dd586_2665
( YP_003334212.1 )

Conjugal transfer protein TrbC

NC_013592
(Dickeya dadantii Ech586)

6e-25

6) virB2
( NP_995422.1 )

type IV secretory pathway VirB2 component

NC_005814
(Yersinia pestis 91001)

3e-17

7) triB
( YP_068513.1 )

TriB protein

NC_006154
(Yersinia pseudotuberculosis IP 32953)

5e-14

• Sequence Alignments

1) CKO_00897 in NC_009792


> AY233333|4|G4|37927519|AAP70284.1|Escherichia_coli_ECOR31|+|7072..7365|-|-|VirB2-like 
protein
Length=97

 Score =  109 bits (396),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 75/75 (100%), Positives = 75/75 (100%), Gaps = 0/75 (0%)

Query  1   MILFRKLKAVVPPVSACTLTTFSATPALADGFQRANTVMQKVSTGLHGLaaititvaviW  60
           MILFRKLKAVVPPVSACTLTTFSATPALADGFQRANTVMQKVSTGLHGLAAITITVAVIW
Sbjct  1   MILFRKLKAVVPPVSACTLTTFSATPALADGFQRANTVMQKVSTGLHGLAAITITVAVIW  60

Query  61  IGYKTLWKGESLSQC  75
           IGYKTLWKGESLSQC
Sbjct  61  IGYKTLWKGESLSQC  75

2) ECED1_2262 in NC_011745


> AY233333|4|G4|37927519|AAP70284.1|Escherichia_coli_ECOR31|+|7072..7365|-|-|VirB2-like 
protein
Length=97

 Score =  109 bits (396),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 75/75 (100%), Positives = 75/75 (100%), Gaps = 0/75 (0%)

Query  1   MILFRKLKAVVPPVSACTLTTFSATPALADGFQRANTVMQKVSTGLHGLaaititvaviW  60
           MILFRKLKAVVPPVSACTLTTFSATPALADGFQRANTVMQKVSTGLHGLAAITITVAVIW
Sbjct  1   MILFRKLKAVVPPVSACTLTTFSATPALADGFQRANTVMQKVSTGLHGLAAITITVAVIW  60

Query  61  IGYKTLWKGESLSQC  75
           IGYKTLWKGESLSQC
Sbjct  61  IGYKTLWKGESLSQC  75

3) ECUMN_2285 in NC_011751


> AY233333|4|G4|37927519|AAP70284.1|Escherichia_coli_ECOR31|+|7072..7365|-|-|VirB2-like 
protein
Length=97

 Score =  109 bits (396),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 75/75 (100%), Positives = 75/75 (100%), Gaps = 0/75 (0%)

Query  1   MILFRKLKAVVPPVSACTLTTFSATPALADGFQRANTVMQKVSTGLHGLaaititvaviW  60
           MILFRKLKAVVPPVSACTLTTFSATPALADGFQRANTVMQKVSTGLHGLAAITITVAVIW
Sbjct  1   MILFRKLKAVVPPVSACTLTTFSATPALADGFQRANTVMQKVSTGLHGLAAITITVAVIW  60

Query  61  IGYKTLWKGESLSQC  75
           IGYKTLWKGESLSQC
Sbjct  61  IGYKTLWKGESLSQC  75

4) virB2 in NC_012731


> AY233333|4|G4|37927519|AAP70284.1|Escherichia_coli_ECOR31|+|7072..7365|-|-|VirB2-like 
protein
Length=97

 Score =  109 bits (396),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 75/75 (100%), Positives = 75/75 (100%), Gaps = 0/75 (0%)

Query  1   MILFRKLKAVVPPVSACTLTTFSATPALADGFQRANTVMQKVSTGLHGLaaititvaviW  60
           MILFRKLKAVVPPVSACTLTTFSATPALADGFQRANTVMQKVSTGLHGLAAITITVAVIW
Sbjct  1   MILFRKLKAVVPPVSACTLTTFSATPALADGFQRANTVMQKVSTGLHGLAAITITVAVIW  60

Query  61  IGYKTLWKGESLSQC  75
           IGYKTLWKGESLSQC
Sbjct  61  IGYKTLWKGESLSQC  75

5) Dd586_2665 in NC_013592


> AY233333|4|G4|37927519|AAP70284.1|Escherichia_coli_ECOR31|+|7072..7365|-|-|VirB2-like 
protein
Length=97

 Score =  106 bits (386),  Expect = 6e-25, Method: Compositional matrix adjust.
 Identities = 62/75 (83%), Positives = 69/75 (92%), Gaps = 0/75 (0%)

Query  1   MILFRKLKTAVSAVSAGVLMVFSTTPAFADGFTRANTVMEKVSTGLHGLAAITITVAVIW  60
           MILFRKLK+ V++VSA  L  FS+TPA+ADGF RANTVM+KVSTGLHGLAAITITVAVIW
Sbjct  1   MILFRKLKAVVPPVSACTLTTFSATPALADGFQRANTVMQKVSTGLHGLAAITITVAVIW  60

Query  61  VGYKTLWKGESLSQC  75
           +GYKTLWKGESLSQC
Sbjct  61  IGYKTLWKGESLSQC  75

6) virB2 in NC_005814


> AY233333|4|G4|37927519|AAP70284.1|Escherichia_coli_ECOR31|+|7072..7365|-|-|VirB2-like 
protein
Length=97

 Score = 81.3 bits (289),  Expect = 3e-17, Method: Compositional matrix adjust.
 Identities = 54/79 (69%), Positives = 66/79 (84%), Gaps = 4/79 (5%)

Query  1   MKLFSKVKELISRASAYILAPAMSVFATSPAFADGFSRANTIMEKVSSGLHGLaaititv  60
           M LF K+K +++  SA  L+     F+++PA+ADGF RANT+M+KVS+GLHGLAAITITV
Sbjct  1   MILFRKLKAVVPPVSACTLTT----FSATPALADGFQRANTVMQKVSTGLHGLAAITITV  56

Query  61  aviWIGYKTLWKGESLSQC  79
           AVIWIGYKTLWKGESLSQC
Sbjct  57  AVIWIGYKTLWKGESLSQC  75

7) triB in NC_006154


> AY233333|4|G4|37927519|AAP70284.1|Escherichia_coli_ECOR31|+|7072..7365|-|-|VirB2-like 
protein
Length=97

 Score = 70.8 bits (249),  Expect = 5e-14, Method: Compositional matrix adjust.
 Identities = 38/76 (50%), Positives = 59/76 (78%), Gaps = 2/76 (2%)

Query  1   MSLFQKIKSLFLHPILMPVLA-LASRPALADGFSKANDLMDKISAGLTVLSVGTITVAVM  59
           M LF+K+K++ + P+    L+ +++ PALADGF +AN +M+K+S+GL  L+  TITVAV+
Sbjct  1   MILFRKLKAV-VPPVSACTLTTFSATPALADGFQRANTVMQKVSTGLHGLAAITITVAVI  59

Query  60  WVGYKVLWNGQSLKDC  75
           W+GYK LW+G+SL +C
Sbjct  60  WIGYKTLWKGESLSQC  75