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Homologs of ttrR gene of AJ224978

168

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) STBHUCCB_13470
( YP_005216905.1 )

Response regulator

NC_016832
(Salmonella enterica P-stx-12)

4e-95

100

2) ttrR
( YP_005237255.1 )

response regulator

NC_016856
(Salmonella enterica 14028S)

5e-95

100

3) ttrR
( YP_002226698.1 )

two-component response regulator

NC_011274
(Salmonella enterica 287/91)

5e-95

100

4) ttrR
( YP_005396787.1 )

two-component response regulator

NC_017046
(Salmonella enterica 798)

5e-95

100

5) SU5_02004
( YP_006087638.1 )

Tetrathionate reductase two-component response regulator

NC_017623
(Salmonella enterica B182)

5e-95

100

6) ttrR
( YP_008480876.1 )

putative two-component response regulator

NC_022221
(Salmonella enterica CDC1983-67)

5e-95

100

7) ttrR
( NP_460352.2 )

response regulator

NC_003197
(Salmonella enterica LT2)

5e-95

100

8) ttrR
( YP_002243758.1 )

two-component response regulator

NC_011294
(Salmonella enterica P125109)

5e-95

100

9) ttrR
( YP_005212413.1 )

putative two-component response regulator

NC_016831
(Salmonella enterica RKS5078)

5e-95

100

10) ttrR
( YP_005181231.1 )

putative two-component response regulator

NC_016810
(Salmonella enterica SL1344)

5e-95

100

11) SNSL254_A1500
( YP_002040641.1 )

response regulator

NC_011080
(Salmonella enterica SL254)

5e-95

100

12) SeHA_C1521
( YP_002045392.1 )

response regulator

NC_011083
(Salmonella enterica SL476)

5e-95

100

13) ttrR
( YP_005242287.1 )

response regulator

NC_016857
(Salmonella enterica ST4/74)

5e-95

100

14) SN31241_24590
( YP_008360375.1 )

Response regulator

NC_021902
(Salmonella enterica USMARC-S3124.1)

5e-95

100

15) CFSAN001992_04655
( YP_007470689.1 )

response regulator

NC_020307
(Salmonella enterica CFSAN001992)

1e-94

16) SE451236_12800
( YP_008265586.1 )

Tetrathionate response regulatory protein TtrR

NC_021820
(Salmonella enterica 08-1736)

8e-95

100

17) SBOV13851
( YP_008505253.1 )

response regulator

NC_022241
(Salmonella enterica 3114)

8e-95

100

18) SEEH1578_16170
( YP_008247293.1 )

response regulator

NC_021810
(Salmonella enterica 41578)

8e-95

100

19) SSPA1364
( YP_002142203.1 )

two-component response regulator

NC_011147
(Salmonella enterica AKU12601)

8e-95

100

20) ttrR
( YP_150717.1 )

two-component response regulator

NC_006511
(Salmonella enterica ATCC 9150)

8e-95

100

21) SEEB0189_12600
( YP_008308835.1 )

Tetrathionate response regulatory protein TtrR

NC_021844
(Salmonella enterica CFSAN000189)

8e-95

100

22) CFSAN001921_10215
( YP_008255416.1 )

Tetrathionate response regulatory protein TtrR

NC_021814
(Salmonella enterica CFSAN001921)

8e-95

100

23) CFSAN002050_13330
( YP_008260577.1 )

Tetrathionate response regulatory protein TtrR

NC_021818
(Salmonella enterica CFSAN002050)

8e-95

100

24) CFSAN002069_02065
( YP_008249273.1 )

Tetrathionate response regulatory protein TtrR

NC_021812
(Salmonella enterica CFSAN002069)

8e-95

100

25) ttrR
( NP_456141.1 )

putative two-component response regulator

NC_003198
(Salmonella enterica CT18)

8e-95

100

26) SeD_A1955
( YP_002215741.1 )

response regulator

NC_011205
(Salmonella enterica CT_02021853)

8e-95

100

27) STMMW_13921
( YP_005232446.1 )

putative two-component response regulator

NC_016854
(Salmonella enterica D23580)

8e-95

100

28) ttrR
( YP_002637900.1 )

two-component response regulator

NC_012125
(Salmonella enterica RKS4594)

8e-95

100

29) I137_05540
( YP_008380618.1 )

Tetrathionate response regulatory protein TtrR

NC_021984
(Salmonella enterica S06004)

8e-95

100

30) ttrR
( YP_216395.1 )

tetrathionate reductase complex: response regulator

NC_006905
(Salmonella enterica SC-B67)

8e-95

100

31) SeAg_B1784
( YP_002146653.1 )

response regulator

NC_011149
(Salmonella enterica SL483)

8e-95

100

32) STMDT12_C14030
( YP_005247099.1 )

response regulator

NC_016860
(Salmonella enterica T000240)

8e-95

100

33) ttrR
( NP_805058.1 )

two-component response regulator

NC_004631
(Salmonella enterica Ty2)

8e-95

100

34) TY21A_06385
( YP_007925581.1 )

response regulator

NC_021176
(Salmonella enterica Ty21a)

8e-95

100

35) STU288_03255
( YP_007901756.1 )

response regulator

NC_021151
(Salmonella enterica U288)

8e-95

100

36) ttrR
( YP_005251891.1 )

response regulator

NC_016863
(Salmonella enterica UK-1)

8e-95

100

37) SeSA_A1484
( YP_002114402.1 )

response regulator

NC_011094
(Salmonella enterica CVM19633)

8e-95

38) SPAB_01941
( YP_001588164.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

2e-94

39) SARI_01595
( YP_001570631.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

2e-89

40) A464_1417
( YP_008322013.1 )

Tetrathionate reductase two-component responseregulator

NC_021870
(Salmonella bongori N268-08)

8e-87

41) ttrR
( YP_004730096.1 )

two-component response regulator

NC_015761
(Salmonella bongori NCTC 12419)

8e-87

42) KOX_20760
( YP_005020111.1 )

response regulator

NC_016612
(Klebsiella oxytoca KCTC 1686)

5e-71

43) A225_3013
( YP_006498724.1 )

Tetrathionate reductase two-component response regulator

NC_018106
(Klebsiella oxytoca E718)

8e-71

44) SMWW4_v1c33630
( YP_007407174.1 )

response regulator

NC_020211
(Serratia marcescens WW4)

3e-57

45) YE105_C2506
( YP_004298705.1 )

tetrathionate reductase complex: two-component system response regulator

NC_015224
(Yersinia enterocolitica 105.5R(r))

4e-53

46) Y11_05051
( YP_006004004.1 )

tetrathionate reductase two-component response regulator

NC_017564
(Yersinia enterocolitica Y11)

1e-52

47) WQG_7850
( YP_007547855.1 )

reductase

NC_020515
(Bibersteinia trehalosi USDA-ARS-USMARC-192)

5e-52

48) MU9_1742
( YP_007505161.1 )

Tetrathionate reductase two-component response regulator

NC_020418
(Morganella morganii KT)

3e-51

49) J450_10220
( YP_008221030.1 )

Tetrathionate response regulatory protein TtrR

NC_021738
(Mannheimia haemolytica D171)

4e-49

50) Spro_1065
( YP_001477297.1 )

two component LuxR family transcriptional regulator

NC_009832
(Serratia proteamaculans 568)

5e-49

51) ttrR
( YP_008398325.1 )

two component system response regulator of tetrathionate reductase complex

NC_022000
(Proteus mirabilis BB2000)

6e-49

52) Entcl_2150
( YP_003941688.1 )

LuxR family two component transcriptional regulator

NC_014618
(Enterobacter cloacae SCF1)

6e-49

53) ttrR
( YP_002151416.1 )

two component system response regulator of tetrathionate reductase complex

NC_010554
(Proteus mirabilis HI4320)

7e-49

54) EBL_c11430
( YP_006318758.1 )

putative response regulator protein

NC_017910
(Escherichia blattae DSM 4481)

6e-48

55) F382_11555
( YP_008235115.1 )

Tetrathionate response regulatory protein TtrR

NC_021743
(Mannheimia haemolytica D153)

1e-47

56) J451_11665
( YP_008223651.1 )

Tetrathionate response regulatory protein TtrR

NC_021739
(Mannheimia haemolytica D174)

1e-47

57) ttrR
( YP_007883096.1 )

tetrathionate response regulatory protein TtrR

NC_021082
(Mannheimia haemolytica M42548)

1e-47

58) D650_20740
( YP_007666851.1 )

reductase

NC_020833
(Mannheimia haemolytica USDA-ARS-USMARC-183)

1e-47

59) D648_6890
( YP_007668201.1 )

reductase

NC_020834
(Mannheimia haemolytica USDA-ARS-USMARC-185)

1e-47

60) N220_03675
( YP_008338194.1 )

Tetrathionate response regulatory protein TtrR

NC_021883
(Mannheimia haemolytica USMARC_2286)

1e-47

61) M495_04550
( YP_008228877.1 )

Tetrathionate response regulatory protein TtrR

NC_021741
(Serratia liquefaciens ATCC 27592)

7e-48

62) UMN179_01262
( YP_004420178.1 )

response regulator FixJ

NC_015460
(Gallibacterium anatis UMN179)

2e-44

63) S70_17755
( YP_006218052.1 )

two component system response regulator of tetrathionate reductase complex

NC_017731
(Providencia stuartii MRSN 2154)

4e-44

64) HSM_1379
( YP_001784699.1 )

response regulator receiver protein

NC_010519
(Haemophilus somnus 2336)

3e-43

65) ttrR
( YP_719111.1 )

two component response regulator

NC_008309
(Haemophilus somnus 129PT)

1e-42

66) NT08PM_0546
( YP_006239446.1 )

TtrR

NC_017764
(Pasteurella multocida 3480)

2e-42

67) ttrR
( YP_005363207.1 )

tetrathionate reductase regulon response regulator

NC_017027
(Pasteurella multocida HN06)

2e-42

68) ttrR
( NP_245662.1 )

hypothetical protein

NC_002663
(Pasteurella multocida Pm70)

2e-42

69) ttrR
( YP_001005903.1 )

tetrathionate reductase complex: two-component system response regulator

NC_008800
(Yersinia enterocolitica 8081)

3e-41

70) Shewana3_0637
( YP_868281.1 )

two component LuxR family transcriptional regulator

NC_008577
(Shewanella sp. ANA-3)

2e-37

71) Shewana3_3697
( YP_871321.1 )

two component LuxR family transcriptional regulator

NC_008577
(Shewanella sp. ANA-3)

1e-36

72) Shewmr4_0637
( YP_732774.1 )

two component LuxR family transcriptional regulator

NC_008321
(Shewanella sp. MR-4)

2e-36

73) Sbal195_0467
( YP_001552907.1 )

two component LuxR family transcriptional regulator

NC_009997
(Shewanella baltica OS195)

3e-36

74) Sbal678_0474
( YP_005271724.1 )

two component transcriptional regulator, LuxR family

NC_016901
(Shewanella baltica OS678)

3e-36

75) Shew185_0451
( YP_001364682.1 )

response regulator receiver protein

NC_009665
(Shewanella baltica OS185)

4e-36

76) ttrR
( NP_719686.1 )

thiosulfate/tetrathionate-responsive two component signal transduction system response regulator TtrR

NC_004347
(Shewanella oneidensis MR-1)

4e-36

77) Sbal117_4020
( YP_006039174.1 )

LuxR family two component transcriptional regulator

NC_017579
(Shewanella baltica OS117)

5e-36

78) Sbal_3862
( YP_001052202.1 )

response regulator receiver protein

NC_009052
(Shewanella baltica OS155)

5e-36

79) Shewmr7_0436
( YP_736496.1 )

two component LuxR family transcriptional regulator

NC_008322
(Shewanella sp. MR-7)

5e-36

80) Sbal223_0478
( YP_002356435.1 )

LuxR family two component transcriptional regulator

NC_011663
(Shewanella baltica OS223)

6e-36

81) Sbal175_0544
( YP_006019144.1 )

LuxR family two component transcriptional regulator

NC_017571
(Shewanella baltica BA175)

1e-35

82) Shewmr4_3517
( YP_735640.1 )

two component LuxR family transcriptional regulator

NC_008321
(Shewanella sp. MR-4)

2e-35

83) Sput200_0457
( YP_006008409.1 )

two component transciptional regulator for thiosulfate/tetrathionate response, TtrR

NC_017566
(Shewanella putrefaciens 200)

2e-35

84) Sputcn32_0534
( YP_001182065.1 )

response regulator receiver protein

NC_009438
(Shewanella putrefaciens CN-32)

2e-35

85) Sputw3181_3638
( YP_965001.1 )

response regulator receiver protein

NC_008750
(Shewanella sp. W3-18-1)

2e-35

86) GU3_08305
( YP_005092167.1 )

LuxR family transcriptional regulator

NC_016745
(Oceanimonas sp. GK1)

9e-34

87) Fbal_3634
( YP_003914904.1 )

LuxR family transcriptional regulator

NC_014541
(Ferrimonas balearica DSM 9799)

1e-33

88) Sput200_0597
( YP_006008547.1 )

two component response regulator for tetrathionate reductase regulon, TtrR

NC_017566
(Shewanella putrefaciens 200)

2e-33

89) Sputw3181_3508
( YP_964874.1 )

response regulator receiver protein

NC_008750
(Shewanella sp. W3-18-1)

2e-33

90) Sbal223_3675
( YP_002359576.1 )

LuxR family two component transcriptional regulator

NC_011663
(Shewanella baltica OS223)

3e-33

91) Sputcn32_0666
( YP_001182195.1 )

response regulator receiver protein

NC_009438
(Shewanella putrefaciens CN-32)

3e-33

92) Shew185_3732
( YP_001367919.1 )

response regulator receiver protein

NC_009665
(Shewanella baltica OS185)

4e-33

93) Spea_3041
( YP_001502893.1 )

two component LuxR family transcriptional regulator

NC_009901
(Shewanella pealeana ATCC 700345)

4e-33

94) Shal_3129
( YP_001675335.1 )

two component LuxR family transcriptional regulator

NC_010334
(Shewanella halifaxensis HAW-EB4)

5e-33

95) Sbal195_3858
( YP_001556278.1 )

two component LuxR family transcriptional regulator

NC_009997
(Shewanella baltica OS195)

6e-33

96) Sbal678_3888
( YP_005275070.1 )

two component transcriptional regulator, LuxR family

NC_016901
(Shewanella baltica OS678)

6e-33

97) AHA_3289
( YP_857780.1 )

transcriptional regulatory protein FixJ

NC_008570
(Aeromonas hydrophila ATCC 7966)

1e-32

98) AHML_17585
( YP_008044632.1 )

transcriptional regulatory protein FixJ

NC_021290
(Aeromonas hydrophila ML09-119)

2e-32

99) AZKH_1450
( YP_007550748.1 )

two-component response regulator

NC_020516
(Azoarcus sp. KH32C)

6e-32

100) Nhal_1442
( YP_003526980.1 )

response regulator receiver

NC_013960
(Nitrosococcus halophilus Nc 4)

3e-31

101) Sala_2460
( YP_617500.1 )

two component LuxR family transcriptional regulator

NC_008048
(Sphingopyxis alaskensis RB2256)

3e-31

102) fixJ
( YP_759953.1 )

DNA-binding response regulator FixJ

NC_008358
(Hyphomonas neptunium ATCC 15444)

3e-31

103) Daro_3108
( YP_286308.1 )

LuxR family transcriptional regulator

NC_007298
(Dechloromonas aromatica RCB)

5e-31

104) Sbal175_3653
( YP_006022185.1 )

LuxR family two component transcriptional regulator

NC_017571
(Shewanella baltica BA175)

2e-30

105) Sbal117_0695
( YP_006035979.1 )

LuxR family two component transcriptional regulator

NC_017579
(Shewanella baltica OS117)

2e-30

106) Sbal_0593
( YP_001048991.1 )

response regulator receiver protein

NC_009052
(Shewanella baltica OS155)

2e-30

107) EBL_c08480
( YP_006318479.1 )

putative two component transcriptional regulator

NC_017910
(Escherichia blattae DSM 4481)

1e-28

108) Rpdx1_4467
( YP_004110751.1 )

LuxR family two component transcriptional regulator

NC_014834
(Rhodopseudomonas palustris DX-1)

1e-28

109) ebA125
( YP_157091.1 )

two-component response regulator

NC_006513
(Aromatoleum aromaticum EbN1)

7e-29

110) SLG_38420
( YP_004836974.1 )

NarL family two-component system response regulator

NC_015976
(Sphingobium sp. SYK-6)

8e-29

111) Tmz1t_3866
( YP_002890831.1 )

LuxR family transcriptional regulator

NC_011662
(Thauera sp. MZ1T)

2e-28

112) Alvin_0640
( YP_003442622.1 )

two component LuxR family transcriptional regulator

NC_013851
(Allochromatium vinosum DSM 180)

3e-28

113) Sphch_4188
( YP_004556272.1 )

two component transcriptional regulator, LuxR family

NC_015595
(Sphingobium chlorophenolicum L-1)

5e-28

114) SLG_p_00780
( YP_004831198.1 )

NarL family two-component system response regulator

NC_015974
(Sphingobium sp. SYK-6)

5e-28

115) G432_19515
( YP_007592312.1 )

NarL family two-component system response regulator

NC_020542
(Sphingomonas sp. MM-1)

6e-28

116) nodW
( YP_008139008.1 )

nodulation protein W

NC_021591
(Serratia odorifera 4Rx13)

7e-28

117) BRPE64_DCDS06140
( YP_008040524.1 )

Two component transcriptional regulator LuxR family

NC_021289
(Burkholderia sp. RPE64)

9e-28

118) M621_15445
( YP_008159879.1 )

LuxR family transcriptional regulator

NC_021659
(Serratia plymuthica S13)

1e-27

119) Tmz1t_3192
( YP_002890164.1 )

LuxR family transcriptional regulator

NC_011662
(Thauera sp. MZ1T)

2e-27

120) fixJ
( NP_949584.1 )

response regulator FixJ

NC_005296
(Rhodopseudomonas palustris CGA009)

3e-27

121) fixJ
( YP_001993693.1 )

response regulator FixJ

NC_011004
(Rhodopseudomonas palustris TIE-1)

3e-27

122) BN69_2706
( YP_006592808.1 )

LuxR family two component transcriptional regulator

NC_018485
(Methylocystis sp. SC2)

1e-26

123) fixJ
( YP_780655.1 )

response regulator FixJ

NC_008435
(Rhodopseudomonas palustris BisA53)

1e-26

124) fixJ
( YP_002962951.1 )

transcriptional regulator fixJ

NC_012808
(Methylobacterium extorquens AM1)

2e-26

125) Daro_2491
( YP_285695.1 )

LuxR family transcriptional regulator

NC_007298
(Dechloromonas aromatica RCB)

3e-26

126) Daro_0686
( YP_283912.1 )

LuxR family transcriptional regulator

NC_007298
(Dechloromonas aromatica RCB)

4e-26

127) fixJ
( YP_001527571.1 )

transcriptional regulator fixJ

NC_009937
(Azorhizobium caulinodans ORS 571)

5e-26

128) HP15_1053
( YP_005884745.1 )

LuxR family two component transcriptional regulator

NC_017506
(Marinobacter adhaerens HP15)

5e-26

129) Dsui_1581
( YP_005027811.1 )

response regulator

NC_016616
(Dechlorosoma suillum PS)

5e-26

130) fixJ
( YP_002964796.1 )

LuxR family transcriptional regulator

NC_012808
(Methylobacterium extorquens AM1)

6e-26

131) fixJ
( YP_003070008.1 )

two component LuxR family transcriptional regulator; nitrogen fixation transcriptional regulator FixJ

NC_012988
(Methylobacterium extorquens DM4)

6e-26

132) Shew_1969
( YP_001094094.1 )

two component LuxR family transcriptional regulator

NC_009092
(Shewanella loihica PV-4)

1e-25

133) Mrad2831_0400
( YP_001753098.1 )

two component LuxR family transcriptional regulator

NC_010505
(Methylobacterium radiotolerans JCM 2831)

2e-25

134) fixJ
( YP_006399195.1 )

transcriptional regulatory protein FixJ

NC_018000
(Sinorhizobium fredii USDA 257)

2e-25

135) Thimo_2324
( YP_007244694.1 )

response regulator

NC_019940
(Thioflavicoccus mobilis 8321)

3e-25

136) AZOLI_p20317
( YP_004974607.1 )

Two-component response regulator, LuxR/FixJ family

NC_016586
(Azospirillum lipoferum 4B)

3e-25

137) BJ6T_34030
( YP_005608265.1 )

hypothetical protein

NC_017249
(Bradyrhizobium japonicum USDA 6)

4e-25

138) LHK_00204
( YP_002794209.1 )

Response regulator

NC_012559
(Laribacter hongkongensis HLHK9)

1e-24

139) Msil_1825
( YP_002362132.1 )

LuxR family transcriptional regulator

NC_011666
(Methylocella silvestris BL2)

2e-24

140) fixJ
( YP_007336064.1 )

two-component response regulator protein FixJ

NC_020061
(Rhizobium tropici CIAT 899)

3e-24

141) AZL_c01160
( YP_003451953.1 )

two-component response regulator

NC_013857
(Azospirillum sp. B510)

4e-24

142) Mpop_3891
( YP_001926553.1 )

LuxR family transcriptional regulator

NC_010725
(Methylobacterium populi BJ001)

6e-24

143) MYSTI_04028
( YP_007361013.1 )

Fis family transcriptional regulator

NC_020126
(Myxococcus stipitatus DSM 14675)

1e-23

144) TVNIR_1517
( YP_007216665.1 )

putative transcriptional regulatory protein

NC_019902
(Thioalkalivibrio nitratireducens DSM 14787)

3e-23

145) Tbd_1743
( YP_315501.1 )

LuxR family transcriptional regulator

NC_007404
(Thiobacillus denitrificans ATCC 25259)

5e-23

146) fixJ
( YP_005429118.1 )

FixJ family transcriptional regulator

NC_017067
(Marinobacter hydrocarbonoclasticus ATCC 49840)

1e-22

147) fixJ
( YP_158753.1 )

transcriptional regulator fixJ

NC_006513
(Aromatoleum aromaticum EbN1)

2e-22

148) fixJ
( YP_003069782.1 )

two component LuxR family transcriptional regulator; nitrogen fixation transcriptional regulator FixJ

NC_012988
(Methylobacterium extorquens DM4)

4e-22

149) Mchl_3813
( YP_002422559.1 )

LuxR family transcriptional regulator

NC_011757
(Methylobacterium chloromethanicum CM4)

5e-22

150) Mext_3506
( YP_001640962.1 )

response regulator receiver

NC_010172
(Methylobacterium extorquens PA1)

5e-22

151) Bpro_4652
( YP_551433.1 )

two component LuxR family transcriptional regulator

NC_007948
(Polaromonas sp. JS666)

5e-22

152) fixJ
( YP_002964727.1 )

LuxR family transcriptional regulator

NC_012808
(Methylobacterium extorquens AM1)

1e-21

153) CAP2UW1_2102
( YP_003167327.1 )

two component LuxR family transcriptional regulator

NC_013194
(Candidatus Accumulibacter phosphatis UW-1)

1e-21

154) amb0898
( YP_420261.1 )

response regulator

NC_007626
(Magnetospirillum magneticum AMB-1)

1e-21

155) C380_23075
( YP_006856945.1 )

response regulator receiver protein

NC_018708
(Acidovorax sp. KKS102)

2e-21

156) Bpet4764
( YP_001633383.1 )

two-component response regulator

NC_010170
(Bordetella petrii DSM 12804)

6e-21

157) fixJ
( YP_001755250.1 )

response regulator FixJ

NC_010505
(Methylobacterium radiotolerans JCM 2831)

1e-20

158) Acav_4589
( YP_004237036.1 )

LuxR family two component transcriptional regulator

NC_015138
(Acidovorax avenae ATCC 19860)

2e-20

159) amb3290
( YP_422653.1 )

response regulator

NC_007626
(Magnetospirillum magneticum AMB-1)

7e-20

160) Varpa_5872
( YP_004158135.1 )

two component LuxR family transcriptional regulator

NC_014931
(Variovorax paradoxus EPS)

9e-20

161) Pnap_3894
( YP_984111.1 )

response regulator receiver protein

NC_008781
(Polaromonas naphthalenivorans CJ2)

6e-19

162) fixJ
( YP_001755937.1 )

response regulator FixJ

NC_010505
(Methylobacterium radiotolerans JCM 2831)

7e-19

163) Thivi_0850
( YP_006413013.1 )

response regulator

NC_018012
(Thiocystis violascens DSM 198)

2e-18

164) Snov_3550
( YP_003695443.1 )

LuxR family transcriptional regulator

NC_014217
(Starkeya novella DSM 506)

7e-18

165) CtCNB1_4745
( YP_003280787.1 )

two component transcriptional regulator LuxR

NC_013446
(Comamonas testosteroni CNB-1)

2e-17

166) Veis_4829
( YP_999538.1 )

response regulator receiver protein

NC_008786
(Verminephrobacter eiseniae EF01-2)

3e-16

167) Varpa_1852
( YP_004154173.1 )

two component LuxR family transcriptional regulator

NC_014931
(Variovorax paradoxus EPS)

5e-16

168) Mpe_A0209
( YP_001019406.1 )

LuxR family transcriptional regulator

NC_008825
(Methylibium petroleiphilum PM1)

7e-15

• Sequence Alignments

1) STBHUCCB_13470 in NC_016832


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  339 bits (1274),  Expect = 4e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  7    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  66
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  67   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  126
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  127  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  186
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  187  GSLAELIRRFEKMASPETRIRTTYEP  212
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

2) ttrR in NC_011294


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  339 bits (1273),  Expect = 5e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  7    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  66
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  67   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  126
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  127  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  186
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  187  GSLAELIRRFEKMASPETRIRTTYEP  212
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

3) ttrR in NC_011274


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  339 bits (1273),  Expect = 5e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  7    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  66
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  67   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  126
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  127  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  186
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  187  GSLAELIRRFEKMASPETRIRTTYEP  212
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

4) ttrR in NC_022221


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  339 bits (1273),  Expect = 5e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  7    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  66
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  67   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  126
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  127  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  186
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  187  GSLAELIRRFEKMASPETRIRTTYEP  212
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

5) ttrR in NC_016831


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  339 bits (1273),  Expect = 5e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  7    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  66
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  67   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  126
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  127  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  186
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  187  GSLAELIRRFEKMASPETRIRTTYEP  212
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

6) SU5_02004 in NC_017623


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  339 bits (1273),  Expect = 5e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  7    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  66
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  67   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  126
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  127  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  186
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  187  GSLAELIRRFEKMASPETRIRTTYEP  212
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

7) SeHA_C1521 in NC_011083


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  339 bits (1273),  Expect = 5e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  7    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  66
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  67   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  126
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  127  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  186
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  187  GSLAELIRRFEKMASPETRIRTTYEP  212
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

8) SNSL254_A1500 in NC_011080


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  339 bits (1273),  Expect = 5e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  7    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  66
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  67   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  126
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  127  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  186
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  187  GSLAELIRRFEKMASPETRIRTTYEP  212
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

9) SN31241_24590 in NC_021902


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  339 bits (1273),  Expect = 5e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  7    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  66
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  67   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  126
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  127  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  186
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  187  GSLAELIRRFEKMASPETRIRTTYEP  212
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

10) ttrR in NC_016856


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  339 bits (1273),  Expect = 5e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  7    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  66
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  67   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  126
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  127  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  186
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  187  GSLAELIRRFEKMASPETRIRTTYEP  212
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

11) ttrR in NC_017046


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  339 bits (1273),  Expect = 5e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  7    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  66
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  67   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  126
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  127  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  186
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  187  GSLAELIRRFEKMASPETRIRTTYEP  212
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

12) ttrR in NC_003197


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  339 bits (1273),  Expect = 5e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  7    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  66
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  67   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  126
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  127  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  186
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  187  GSLAELIRRFEKMASPETRIRTTYEP  212
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

13) ttrR in NC_016810


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  339 bits (1273),  Expect = 5e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  7    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  66
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  67   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  126
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  127  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  186
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  187  GSLAELIRRFEKMASPETRIRTTYEP  212
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

14) ttrR in NC_016857


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  339 bits (1273),  Expect = 5e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  7    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  66
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  67   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  126
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  127  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  186
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  187  GSLAELIRRFEKMASPETRIRTTYEP  212
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

15) CFSAN001992_04655 in NC_020307


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  338 bits (1267),  Expect = 1e-94, Method: Compositional matrix adjust.
 Identities = 205/206 (99%), Positives = 205/206 (99%), Gaps = 0/206 (0%)

Query  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQVGVVLLDMRMPVLDG  60
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQ GVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  GSLAELIRRFEKMASPETRIRTTYEP  206
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

16) SE451236_12800 in NC_021820


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  338 bits (1270),  Expect = 8e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  GSLAELIRRFEKMASPETRIRTTYEP  206
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

17) SeAg_B1784 in NC_011149


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  338 bits (1270),  Expect = 8e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  GSLAELIRRFEKMASPETRIRTTYEP  206
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

18) SEEB0189_12600 in NC_021844


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  338 bits (1270),  Expect = 8e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  GSLAELIRRFEKMASPETRIRTTYEP  206
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

19) SBOV13851 in NC_022241


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  338 bits (1270),  Expect = 8e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  GSLAELIRRFEKMASPETRIRTTYEP  206
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

20) ttrR in NC_006905


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  338 bits (1270),  Expect = 8e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  GSLAELIRRFEKMASPETRIRTTYEP  206
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

21) CFSAN002050_13330 in NC_021818


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  338 bits (1270),  Expect = 8e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  GSLAELIRRFEKMASPETRIRTTYEP  206
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

22) SeD_A1955 in NC_011205


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  338 bits (1270),  Expect = 8e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  GSLAELIRRFEKMASPETRIRTTYEP  206
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

23) SEEH1578_16170 in NC_021810


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  338 bits (1270),  Expect = 8e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  GSLAELIRRFEKMASPETRIRTTYEP  206
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

24) CFSAN002069_02065 in NC_021812


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  338 bits (1270),  Expect = 8e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  GSLAELIRRFEKMASPETRIRTTYEP  206
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

25) SSPA1364 in NC_011147


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  338 bits (1270),  Expect = 8e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  GSLAELIRRFEKMASPETRIRTTYEP  206
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

26) ttrR in NC_006511


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  338 bits (1270),  Expect = 8e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  GSLAELIRRFEKMASPETRIRTTYEP  206
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

27) ttrR in NC_012125


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  338 bits (1270),  Expect = 8e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  GSLAELIRRFEKMASPETRIRTTYEP  206
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

28) I137_05540 in NC_021984


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  338 bits (1270),  Expect = 8e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  GSLAELIRRFEKMASPETRIRTTYEP  206
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

29) ttrR in NC_003198


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  338 bits (1270),  Expect = 8e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  GSLAELIRRFEKMASPETRIRTTYEP  206
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

30) STMMW_13921 in NC_016854


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  338 bits (1270),  Expect = 8e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  GSLAELIRRFEKMASPETRIRTTYEP  206
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

31) STMDT12_C14030 in NC_016860


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  338 bits (1270),  Expect = 8e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  GSLAELIRRFEKMASPETRIRTTYEP  206
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

32) STU288_03255 in NC_021151


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  338 bits (1270),  Expect = 8e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  GSLAELIRRFEKMASPETRIRTTYEP  206
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

33) ttrR in NC_016863


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  338 bits (1270),  Expect = 8e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  GSLAELIRRFEKMASPETRIRTTYEP  206
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

34) CFSAN001921_10215 in NC_021814


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  338 bits (1270),  Expect = 8e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  GSLAELIRRFEKMASPETRIRTTYEP  206
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

35) TY21A_06385 in NC_021176


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  338 bits (1270),  Expect = 8e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  GSLAELIRRFEKMASPETRIRTTYEP  206
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

36) ttrR in NC_004631


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  338 bits (1270),  Expect = 8e-95, Method: Compositional matrix adjust.
 Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  GSLAELIRRFEKMASPETRIRTTYEP  206
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

37) SeSA_A1484 in NC_011094


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  338 bits (1270),  Expect = 8e-95, Method: Compositional matrix adjust.
 Identities = 205/206 (99%), Positives = 205/206 (99%), Gaps = 0/206 (0%)

Query  7    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  66
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  67   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  126
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  127  SAAVARREIILCYQQLTPKERELASLVVKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  186
            SAAVARREIILCYQQLTPKERELASLV KGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  187  GSLAELIRRFEKMASPETRIRTTYEP  212
            GSLAELIRRFEKMASPETRIRTTYEP
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

38) SPAB_01941 in NC_010102


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  337 bits (1266),  Expect = 2e-94, Method: Compositional matrix adjust.
 Identities = 205/206 (99%), Positives = 206/206 (100%), Gaps = 0/206 (0%)

Query  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60
            MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180
            SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  GSLAELIRRFEKMASPETRIRTTYES  206
            GSLAELIRRFEKMASPETRIRTTYE+
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

39) SARI_01595 in NC_010067


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  321 bits (1203),  Expect = 2e-89, Method: Compositional matrix adjust.
 Identities = 186/206 (91%), Positives = 201/206 (98%), Gaps = 0/206 (0%)

Query  1    MAIIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQAGLYQTGVILLDMRMPVLDG  60
            MA IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQA+LYQ+GV+LLDMRMPVLDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   QDVHDALRQCGGTLAVIFLTGHGDVPMAVEQMKRGAVDFLQKPVAVKPLQAALERALRVS  120
            Q+VHDALRQCG+TLAV+FLTGHGDVPMAVEQMKRGAVDFLQKPV+VKPLQAALERAL VS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  SLAVARREIMLCYQQLTPKERELASLVAKGFMNREIAEAMNIALRTVEVHRARVMEKMQA  180
            S AVARREI+LCYQQLTPKERELASLVAKGFMNREIAEAMNIA+RTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  GSLAELIRRFEKLTAPETKISTNYDS  206
            GSLAELIRRFEK+++PET+I T Y++
Sbjct  181  GSLAELIRRFEKMASPETRIRTTYEP  206

40) ttrR in NC_015761


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  312 bits (1169),  Expect = 8e-87, Method: Compositional matrix adjust.
 Identities = 184/200 (92%), Positives = 195/200 (98%), Gaps = 0/200 (0%)

Query  1    MAIIHLLDDDTAVTHACAFLLESLGYNVTCWTQGADFLAQASLYQAGVVLLDMRMPGLDG  60
            MA IHLLDDDTAVT+ACAFLLESLGY+V CWTQGADFLAQASLYQAGVVLLDMRMP LDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALAVS  120
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERAL+VS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  SAEVARRDIMLCYQQLTPKERELASLVAKGLMNREIAQAMNIAVRTVEVHRARVMEKMQA  180
            SA VARR+I+LCYQQLTPKERELASLVAKG+MNREIA+AMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  SSLAELIRRFEKLAAPEDRM  200
            +SLAELIRRFEK+A+PE R+
Sbjct  181  GSLAELIRRFEKMASPETRI  200

41) A464_1417 in NC_021870


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  312 bits (1169),  Expect = 8e-87, Method: Compositional matrix adjust.
 Identities = 184/200 (92%), Positives = 195/200 (98%), Gaps = 0/200 (0%)

Query  1    MAIIHLLDDDTAVTHACAFLLESLGYNVTCWTQGADFLAQASLYQAGVVLLDMRMPGLDG  60
            MA IHLLDDDTAVT+ACAFLLESLGY+V CWTQGADFLAQASLYQAGVVLLDMRMP LDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALAVS  120
            QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERAL+VS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  SAEVARRDIMLCYQQLTPKERELASLVAKGLMNREIAQAMNIAVRTVEVHRARVMEKMQA  180
            SA VARR+I+LCYQQLTPKERELASLVAKG+MNREIA+AMNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  SSLAELIRRFEKLAAPEDRM  200
            +SLAELIRRFEK+A+PE R+
Sbjct  181  GSLAELIRRFEKMASPETRI  200

42) KOX_20760 in NC_016612


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  259 bits (969),  Expect = 5e-71, Method: Compositional matrix adjust.
 Identities = 151/195 (78%), Positives = 174/195 (90%), Gaps = 0/195 (0%)

Query  1    MAIIHLLDDDLAVTQACAFLLESLGYEVMCWAEGGVFLAQADLFRTGVVLLDMRMPALDG  60
            MA IHLLDDD AVT+ACAFLLESLGY+V CW++G+ FLAQA L+++GVVLLDMRMP LDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   QAVHEALRQRGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQTALEHGLAAS  120
            Q+VH+ALRQ GSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQ+ALE++L+ S
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  GERFARQKNVDCYQQLTPKERELALLVVKGLMNREIAEIMNIAVRTVEVHRARVMEKMQA  180
            +   AR+  + CYQQLTPKERELA LV KG+MNREIAE MNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  GSLAELVSILQPIIA  195
            GSLAEL+  ++ + +
Sbjct  181  GSLAELIRRFEKMAS  195

43) A225_3013 in NC_018106


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  259 bits (967),  Expect = 8e-71, Method: Compositional matrix adjust.
 Identities = 151/195 (78%), Positives = 173/195 (89%), Gaps = 0/195 (0%)

Query  1    MAIIHLLDDDLAVTQACAFLLESLGYEVMCWAEGDVFLAQADLFRTGVVLLDMRMPALDG  60
            MA IHLLDDD AVT+ACAFLLESLGY+V CW++G  FLAQA L+++GVVLLDMRMP LDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   QAVHEALRQRGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQTALEHGLAAS  120
            Q+VH+ALRQ GSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQ+ALE++L+ S
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  GERFARQKNVDCYQQLTPKERELALLVVKGLMNREIAEIMNIAVRTVEVHRARVMEKMQA  180
            +   AR+  + CYQQLTPKERELA LV KG+MNREIAE MNIAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  GSLAELVSILQPIIA  195
            GSLAEL+  ++ + +
Sbjct  181  GSLAELIRRFEKMAS  195

44) SMWW4_v1c33630 in NC_020211


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  213 bits (794),  Expect = 3e-57, Method: Compositional matrix adjust.
 Identities = 128/196 (66%), Positives = 161/196 (83%), Gaps = 0/196 (0%)

Query  1    MPLIHLVDDDVAVTDACHFLLTSLGHDVQCWNDSTDFLAQADLFQTGIVLLDMRMPKLDG  60
            M+ IHL+DDD AVT+AC FLL SLG DV+CW +++DFLAQA L+Q+G+VLLDMRMP LDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   HQAYAELRRLGSTLAVVFLSGHGDVPMAVEQMKYGAVDFLQKPIAAEPLIAALERARQVS  120
            +     LR+ GSTLAVVFL+GHGDVPMAVEQMK GAVDFLQKP++  PL AALERA  VS
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  AKAWRRHETCGRYRTLTPKERDIAQLVVRGMMNREMAERLNIALRTVEVHRAKVMEKMQA  180
            + A  R+E    Y+ LTPKER++A LV +G MNRE+AE +NIA+RTVEVHRA+VMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  ASLAELVVQLQGLPHA  196
            +SLAEL+ +++ ++ +
Sbjct  181  GSLAELIRRFEKMASP  196

45) YE105_C2506 in NC_015224


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  200 bits (743),  Expect = 4e-53, Method: Compositional matrix adjust.
 Identities = 116/187 (63%), Positives = 146/187 (79%), Gaps = 0/187 (0%)

Query  1    MSLIHLVDDDIAVTDACRFLLESLGYKVKVWHEGDRFLAQADLYQPGVVLLDIRMPLLDG  60
            M+ IHL+DDD AVT+AC FLLESLGY VK W +G  FLAQA LYQ+GVVLLD+RMP+LDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   TEVYARMRQLNSTLAVIFLTAHGEVPQAVEQMKLGAVDFLQKPVATAPLIAALQQGLVQS  120
              V   +RQ  STLAV+FLT+HG+VP AVEQMK GAVDFLQKPV+  PL AAL+++L  S
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  EQLVTRRQVQLRYASLPPREQMIAQWVMQGLINRDIADRACVSVRTVEVHRAKVMEKMAV  180
               V+RR++ L Y  L P+E+ +A  V +G++NR+IA+   ++VRTVEVHRA+VMEKM  
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  NSLAELV  187
             SLAEL+
Sbjct  181  GSLAELI  187

46) Y11_05051 in NC_017564


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  198 bits (737),  Expect = 1e-52, Method: Compositional matrix adjust.
 Identities = 116/187 (63%), Positives = 146/187 (79%), Gaps = 0/187 (0%)

Query  1    MSLIHLVDDDIAVTDACRFLLESLGYKVKVWHEGDRFLAQADLYQPGVVLLDIRMPLLDG  60
            M+ IHL+DDD AVT+AC FLLESLGY VK W +G  FLAQA LYQ+GVVLLD+RMP+LDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   TEVYARMRQLNSTLAVIFLTAHGEVPQAVEQMKLGAVDFLQKPVATAPLIAALQQGLVQS  120
              V   +RQ  STLAV+FLT+HG+VP AVEQMK GAVDFLQKPV+  PL AAL+++L  S
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  EQLVTRRQVQLRYASLTPREQMIAQWVMQGLINRDIADRACVSVRTVEVHRAKVTEKMAV  180
               V+RR++ L Y  LTP+E+ +A  V +G++NR+IA+   ++VRTVEVHRA+V EKM  
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  NSLAELV  187
             SLAEL+
Sbjct  181  GSLAELI  187

47) WQG_7850 in NC_020515


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  196 bits (729),  Expect = 5e-52, Method: Compositional matrix adjust.
 Identities = 107/193 (56%), Positives = 149/193 (78%), Gaps = 0/193 (0%)

Query  11   IHILDDEESILDAMSFLLAPLGIEIQTWQSSVDFLAQADLHQQGVLLLDIRMPLPDGQQV  70
            IH+LDD+ ++ +A +FLL +LG +++ W  + DFLAQA L Q GV+LLD+RMP+ DGQ V
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGV  63

Query  71   HQQLREVQSTLAVVIMTAHGDVPMAVAELKKGAVDFLQKPASFEQLKQAITQVKTVSEQA  130
            H+ LR+  STLAVV++T+HGDVPMAV ++K+GAVDFLQKP S   L+ A+ +  TVS  A
Sbjct  64   HDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAA  123

Query  131  VKIREISQNYAKLTEKERNLVPLIMQGFTNKQIADHLAISVRTVEVHRANVMEKMQAESL  190
            V  REI   Y +LT KER+L +L+ +GF N++IA+ + I+VRTVEVHRA VMEKMQA SL
Sbjct  124  VARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGSL  183

Query  191  AELVQKLGLLPTP  203
            AEL++++  +++P
Sbjct  184  AELIRRFEKMASP  196

48) MU9_1742 in NC_020418


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  194 bits (719),  Expect = 3e-51, Method: Compositional matrix adjust.
 Identities = 124/198 (63%), Positives = 162/198 (82%), Gaps = 0/198 (0%)

Query  1    MPVIHLVDDDVAVTQACQFLLESLGYEVCVWNDSRTFIAQAPLHTYGIVLLDMRMPHFDG  60
            M+ IHL+DDD AVT+AC FLLESLGY+V  W ++  F+AQA+L   G+VLLDMRMP +DG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   CRVHQILQERHSTLAVIFLTGHGDLPMAVEQMKLGAVDFLQKPVATQPLQAALtraaavt  120
              VH+ L++  STLAV+FLTGHGD+PMAVEQMK GAVDFLQKPV+ +PLQAAL RA +V+
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  gkavacarIRDRFQTLTPKERQIAGFVAQGLMNREIADIAHVAVRTVEVHRAKVMEKMAA  180
            + AVA   I   +Q LTPKER++A++VA+G+MNREIA+  ++AVRTVEVHRA+VMEKM A
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  GSLAELVTQLNSITDAEN  198
            GSLAEL+ +++ ++ +E 
Sbjct  181  GSLAELIRRFEKMASPET  198

49) J450_10220 in NC_021738


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  187 bits (693),  Expect = 4e-49, Method: Compositional matrix adjust.
 Identities = 104/190 (55%), Positives = 144/190 (76%), Gaps = 0/190 (0%)

Query  3    IHILDDEESILDAMSFLLAPLGVEIQTWQSSLDFLAQADLHRQGVLLLDIRMPLPDGQQV  62
            IH+LDD+ ++ +A +FLL +LG +++ W  + DFLAQA L + GV+LLD+RMP+ DGQ V
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGV  63

Query  63   HQQLREAQSTLAVVIMTAHGDVPMAVAELKKGAVDFLQKPASFEQLKQAIAQAEKVSEKA  122
            H+ LR+  STLAVV++T+HGDVPMAV ++K+GAVDFLQKP S   L+ A+ +A  VS  A
Sbjct  64   HDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAA  123

Query  123  VKIREISQNYAKLTEKERNLVPLIMQGFTNKQIADKLAISVRTVEVHRANVMEKMQAESL  182
            V  REI   Y +LT KER+L +L+ +GF N++IA+ + I+VRTVEVHRA VMEKMQA SL
Sbjct  124  VARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGSL  183

Query  183  AGLVQMIGEL  192
            A L++ +  +
Sbjct  184  AELIRRFEKM  193

50) Spro_1065 in NC_009832


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  186 bits (691),  Expect = 5e-49, Method: Compositional matrix adjust.
 Identities = 112/198 (57%), Positives = 150/198 (76%), Gaps = 0/198 (0%)

Query  1    MALIHLVDDDLAVTDACRFLLEGLNYRVQIWHDSQKFVDQVSLYQCGVVMLDIRMPGMDG  60
            MA IHL+DDD AVT+AC FLLE+L Y V+ W ++  F+ Q SLYQ GVV+LD+RMP +DG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   QQVHQQLRRQESTLAVVIVTGHGDIAMAVTEMKLGAVDFLQKPIAAAPLIEALDRGIAHS  120
            Q VH+ LR+  STLAVV++TGHGD++MAV +MK GAVDFLQKP++  PL  AL+R+++ S
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  QNRLERYQLQQRFSALTPREREIARAVAAGMTNKLIADRHFIAVRTVEVHRARVMEKMQA  180
               + R ++   +  LTP+ERE+A  VA G  N+ IA+   IAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  ASLAELVNSLNQLTLTEP  198
            +SLAEL+  +++++  E 
Sbjct  181  GSLAELIRRFEKMASPET  198

51) ttrR in NC_022000


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  186 bits (690),  Expect = 6e-49, Method: Compositional matrix adjust.
 Identities = 105/187 (57%), Positives = 145/187 (78%), Gaps = 0/187 (0%)

Query  1    MPTIHLVDDDLAVTDACQFLLESLGYAAQVWNDSEYFLHNIDLYQQGVVLLDMRMPKADG  60
            M+TIHL+DDD AVT+AC FLLESLGY  + W ++  FL +  LYQ GVVLLDMRMP  DG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   RQVHQYLIEKHSTLAVIFLTGHGDIPMAVEEIKKGAIDFLQKPVDSNALLSALKSAFTET  120
            + VH+ L +  STLAV+FLTGHGD+PMAVE++K+GA+DFLQKPV  ++L +AL  A+T +
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  ATRFTADDIRRRYASLTPREKDIAYYVIQGLMNREIAETACVSIRTVEVHRAKVMDKMAV  180
            ++  +  +I   Y  LTP+E+++A  V +G+MNREIAE+  +++RTVEVHRA+VM+KM  
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  KNIAELV  187
             ++AEL+
Sbjct  181  GSLAELI  187

52) Entcl_2150 in NC_014618


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  186 bits (690),  Expect = 6e-49, Method: Compositional matrix adjust.
 Identities = 107/196 (55%), Positives = 152/196 (78%), Gaps = 0/196 (0%)

Query  2    IHLVDDDEAVTDACRFLLAAMGYEVQCWNNSGAFLAQAGLHQEGVALLDMRMPPPDGHAI  61
            IHL+DDD AVT+AC FLL ++GY+V+CW +++ FLAQA+L Q GV LLDMRMP  DG+++
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGV  63

Query  62   FAHLRRERSTLAVVFLTGHGDVGMAVEEMKLGAVDFLQKPVAQEPLRAAIARGYQHSRQR  121
               LR+  STLAVVFLTGHGDV MAVE+MK GAVDFLQKPV+  PL+AA+ R+   S   
Sbjct  64   HDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAA  123

Query  122  LETAQVRQRYASLTAKEKQVAGLVVSGSMNKDIADKLSVSLRTVEVHRARVMDKMaaasl  181
            +   ++   Y  LT+KE+++A+LV  G MN++IA+ +++++RTVEVHRARVM+KM A+SL
Sbjct  124  VARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGSL  183

Query  182  avlvsQLDKLRDDDAH  197
            A L+ +++K+   +++
Sbjct  184  AELIRRFEKMASPETR  199

53) ttrR in NC_010554


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  186 bits (689),  Expect = 7e-49, Method: Compositional matrix adjust.
 Identities = 104/187 (56%), Positives = 145/187 (78%), Gaps = 0/187 (0%)

Query  1    MPTIHLVDDDLAVTDACQFLLESLGYAAQVWNDSEYFLHNIDLYQQGVVLLDMRMPKADG  60
            M+TIHL+DDD AVT+AC FLLESLGY  + W ++  FL +  LYQ GVVLLDMRMP  DG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   RQVHQYLIEKHSTLAVIFLTGHGDIPMAVEEIKKGAIDFLQKPIDSNALLSALKSAFTET  120
            + VH+ L +  STLAV+FLTGHGD+PMAVE++K+GA+DFLQKP+  ++L +AL  A+T +
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  ATRFTADDIRRRYASLTPREKDIAYYVIQGLMNREIAETACVSIRTVEVHRAKVMDKMAV  180
            ++  +  +I   Y  LTP+E+++A  V +G+MNREIAE+  +++RTVEVHRA+VM+KM  
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  KNIAELV  187
             ++AEL+
Sbjct  181  GSLAELI  187

54) EBL_c11430 in NC_017910


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  183 bits (677),  Expect = 6e-48, Method: Compositional matrix adjust.
 Identities = 105/184 (58%), Positives = 145/184 (79%), Gaps = 0/184 (0%)

Query  2    IHLVDDDDAVTRSCRFLLESMGYTVQSWNQSAQFLRDAPLMTTGVALLDMRMPGMDGHAL  61
            IHL+DDD AVT +C FLLES+GY V+ W Q+A+FL +A+L  +GV LLDMRMP +DG+++
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGV  63

Query  62   FQAMREAGSTLAVVFLTGHGDVPMAVKEMRLGAVDFLEKPIAADALQAAITEGYRRSARL  121
             +A+R+ GSTLAVVFLTGHGDVPMAV +M+ GAVDFL+KP++  +LQAA+  +   S+  
Sbjct  64   HDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAA  123

Query  122  NEQHALRVRFASLTSKEKEIAACVVAGLMNKDIAAQMNIAVRTVEVHRARVMEKMAAKNI  181
              ++ + + +  LT+KE+E+A+ V  G+MN++IA  MNIAVRTVEVHRARVMEKM A ++
Sbjct  124  VARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGSL  183

Query  182  AGFI  185
            A +I
Sbjct  184  AELI  187

55) F382_11555 in NC_021743


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  182 bits (674),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 104/190 (55%), Positives = 144/190 (76%), Gaps = 0/190 (0%)

Query  3    IHILDDEESILDAMSFLLAPLGVEIQTWQSSLDFLAQADLHRQGVLLLDIRMPLPDGQQV  62
            IH+LDD+ ++ +A +FLL +LG +++ W  + DFLAQA L + GV+LLD+RMP+ DGQ V
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGV  63

Query  63   HQQLREAQSTLAVVIMTAHGDVPMAVAELKKGAVDFLQKPASFEQLKQAIAQAEKVSEKA  122
            H+ LR+  STLAVV++T+HGDVPMAV ++K+GAVDFLQKP S   L+ A+ +A  VS  A
Sbjct  64   HDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAA  123

Query  123  VKIREISQNYAKLTEKERNLVPLIMQGFTNKQIADKLAISVRTVEVHRANVMEKMQAESL  182
            V  REI   Y +LT KER+L +L+ +GF N++IA+ + I+VRTVEVHRA VMEKMQA SL
Sbjct  124  VARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGSL  183

Query  183  AGLVQMIGEL  192
            A L++ +  +
Sbjct  184  AELIRRFEKM  193

56) J451_11665 in NC_021739


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  182 bits (674),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 104/190 (55%), Positives = 144/190 (76%), Gaps = 0/190 (0%)

Query  3    IHILDDEESILDAMSFLLAPLGVEIQTWQSSLDFLAQADLHRQGVLLLDIRMPLPDGQQV  62
            IH+LDD+ ++ +A +FLL +LG +++ W  + DFLAQA L + GV+LLD+RMP+ DGQ V
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGV  63

Query  63   HQQLREAQSTLAVVIMTAHGDVPMAVAELKKGAVDFLQKPASFEQLKQAIAQAEKVSEKA  122
            H+ LR+  STLAVV++T+HGDVPMAV ++K+GAVDFLQKP S   L+ A+ +A  VS  A
Sbjct  64   HDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAA  123

Query  123  VKIREISQNYAKLTEKERNLVPLIMQGFTNKQIADKLAISVRTVEVHRANVMEKMQAESL  182
            V  REI   Y +LT KER+L +L+ +GF N++IA+ + I+VRTVEVHRA VMEKMQA SL
Sbjct  124  VARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGSL  183

Query  183  AGLVQMIGEL  192
            A L++ +  +
Sbjct  184  AELIRRFEKM  193

57) ttrR in NC_021082


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  182 bits (674),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 104/190 (55%), Positives = 144/190 (76%), Gaps = 0/190 (0%)

Query  3    IHILDDEESILDAMSFLLAPLGVEIQTWQSSLDFLAQADLHRQGVLLLDIRMPLPDGQQV  62
            IH+LDD+ ++ +A +FLL +LG +++ W  + DFLAQA L + GV+LLD+RMP+ DGQ V
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGV  63

Query  63   HQQLREAQSTLAVVIMTAHGDVPMAVAELKKGAVDFLQKPASFEQLKQAIAQAEKVSEKA  122
            H+ LR+  STLAVV++T+HGDVPMAV ++K+GAVDFLQKP S   L+ A+ +A  VS  A
Sbjct  64   HDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAA  123

Query  123  VKIREISQNYAKLTEKERNLVPLIMQGFTNKQIADKLAISVRTVEVHRANVMEKMQAESL  182
            V  REI   Y +LT KER+L +L+ +GF N++IA+ + I+VRTVEVHRA VMEKMQA SL
Sbjct  124  VARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGSL  183

Query  183  AGLVQMIGEL  192
            A L++ +  +
Sbjct  184  AELIRRFEKM  193

58) D648_6890 in NC_020834


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  182 bits (674),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 104/190 (55%), Positives = 144/190 (76%), Gaps = 0/190 (0%)

Query  3    IHILDDEESILDAMSFLLAPLGVEIQTWQSSLDFLAQADLHRQGVLLLDIRMPLPDGQQV  62
            IH+LDD+ ++ +A +FLL +LG +++ W  + DFLAQA L + GV+LLD+RMP+ DGQ V
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGV  63

Query  63   HQQLREAQSTLAVVIMTAHGDVPMAVAELKKGAVDFLQKPASFEQLKQAIAQAEKVSEKA  122
            H+ LR+  STLAVV++T+HGDVPMAV ++K+GAVDFLQKP S   L+ A+ +A  VS  A
Sbjct  64   HDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAA  123

Query  123  VKIREISQNYAKLTEKERNLVPLIMQGFTNKQIADKLAISVRTVEVHRANVMEKMQAESL  182
            V  REI   Y +LT KER+L +L+ +GF N++IA+ + I+VRTVEVHRA VMEKMQA SL
Sbjct  124  VARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGSL  183

Query  183  AGLVQMIGEL  192
            A L++ +  +
Sbjct  184  AELIRRFEKM  193

59) D650_20740 in NC_020833


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  182 bits (674),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 104/190 (55%), Positives = 144/190 (76%), Gaps = 0/190 (0%)

Query  3    IHILDDEESILDAMSFLLAPLGVEIQTWQSSLDFLAQADLHRQGVLLLDIRMPLPDGQQV  62
            IH+LDD+ ++ +A +FLL +LG +++ W  + DFLAQA L + GV+LLD+RMP+ DGQ V
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGV  63

Query  63   HQQLREAQSTLAVVIMTAHGDVPMAVAELKKGAVDFLQKPASFEQLKQAIAQAEKVSEKA  122
            H+ LR+  STLAVV++T+HGDVPMAV ++K+GAVDFLQKP S   L+ A+ +A  VS  A
Sbjct  64   HDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAA  123

Query  123  VKIREISQNYAKLTEKERNLVPLIMQGFTNKQIADKLAISVRTVEVHRANVMEKMQAESL  182
            V  REI   Y +LT KER+L +L+ +GF N++IA+ + I+VRTVEVHRA VMEKMQA SL
Sbjct  124  VARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGSL  183

Query  183  AGLVQMIGEL  192
            A L++ +  +
Sbjct  184  AELIRRFEKM  193

60) N220_03675 in NC_021883


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  182 bits (674),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 104/190 (55%), Positives = 144/190 (76%), Gaps = 0/190 (0%)

Query  3    IHILDDEESILDAMSFLLAPLGVEIQTWQSSLDFLAQADLHRQGVLLLDIRMPLPDGQQV  62
            IH+LDD+ ++ +A +FLL +LG +++ W  + DFLAQA L + GV+LLD+RMP+ DGQ V
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGV  63

Query  63   HQQLREAQSTLAVVIMTAHGDVPMAVAELKKGAVDFLQKPASFEQLKQAIAQAEKVSEKA  122
            H+ LR+  STLAVV++T+HGDVPMAV ++K+GAVDFLQKP S   L+ A+ +A  VS  A
Sbjct  64   HDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAA  123

Query  123  VKIREISQNYAKLTEKERNLVPLIMQGFTNKQIADKLAISVRTVEVHRANVMEKMQAESL  182
            V  REI   Y +LT KER+L +L+ +GF N++IA+ + I+VRTVEVHRA VMEKMQA SL
Sbjct  124  VARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGSL  183

Query  183  AGLVQMIGEL  192
            A L++ +  +
Sbjct  184  AELIRRFEKM  193

61) M495_04550 in NC_021741


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  182 bits (676),  Expect = 7e-48, Method: Compositional matrix adjust.
 Identities = 112/194 (58%), Positives = 148/194 (77%), Gaps = 0/194 (0%)

Query  1    MALIHLVDDDFAVTDACRFLLEGLNYRVQTWHDSQKFIDSIDPYQCGVVMLDIRMPGIDG  60
            MA IHL+DDD AVT+AC FLLE+L Y V+ W ++  F+     YQ GVV+LD+RMP +DG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   QQVHQQLRRQNSTLAVVIVTGHGDIAMAVEEMKLGAVDFLQKPIAAAPLIEALERGIIHS  120
            Q VH+ LR+  STLAVV++TGHGD++MAVE+MK GAVDFLQKP++  PL  ALER++  S
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  qrqveqrqrqqLFGALTPRERDIARAVAAGMTNKQIAESHFIAVRTVEVHRARVMEKMQA  180
               V +R+    +  LTP+ER++A  VA G  N++IAE+  IAVRTVEVHRARVMEKMQA
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  GSLAELVNALNRLT  194
            GSLAEL+  +++++
Sbjct  181  GSLAELIRRFEKMA  194

62) UMN179_01262 in NC_015460


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  171 bits (634),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 92/187 (50%), Positives = 140/187 (75%), Gaps = 0/187 (0%)

Query  2    KVHILDDDETVVDAATFLLTQAGYDVVSWSNSKTFLEQVNPFEPGVVLLDMRMPYFDGRQ  61
             +H+LDDD +V +A +FLL   GYDV  W+++  FL Q + +++GVVLLDMRMP +DG+ 
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  62   VHKILKQQNSVLQVIIMTAFADVDMAVNELKQGAIDFLQKPILFDQLKTALENARIRSEK  121
            VH  L+Q  S L V+++T+ +DV MAV+++K+GA+DFLQKP+    L++ALE A   S  
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  122  RFQQYQIEQCYDQLSEKEKEVLALIIEGNINKQIAERLNISVRTVEVHRSHIMEKMNAKN  181
               + +I  CY+QL+ KE+E+ +L+  G +N++IAE +NI+VRTVEVHR+++MEKM+A +
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  182  VAELIRK  188
            +AELIR+
Sbjct  183  LAELIRR  189

63) S70_17755 in NC_017731


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  170 bits (629),  Expect = 4e-44, Method: Compositional matrix adjust.
 Identities = 107/192 (56%), Positives = 142/192 (74%), Gaps = 0/192 (0%)

Query  1    MPVIHLVDDDPAVTDACQFLLETLGYTVVVWNDSEQFVQQADLHQEGVVLLDMRMPKLDG  60
            M+ IHL+DDD AVT+AC FLLE+LGY V  W ++ +F+ QA L Q GVVLLDMRMP LDG
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  61   RQVHQLLKAQQSTLAVIFLSGHGDIPMAVEQVKLGAVDFLQKPIDSQLLAktleqaqekt  120
            + VH+ L+   STLAV+FL+GHGD+PMAVEQ+K GAVDFLQKP+  + L  +LE+A   +
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  121  qqataSYLIQQRYQTLTPREKEICKYVLQGLINREIADVACVSVRTVEVHRSRMMEKMAV  180
              A A   I   YQ LTP+E+E+   V +G++NREIA+   ++VRTVEVHR+R+MEKM  
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  181  RNLAELMSTLQT  192
             +LAEL+  ++ 
Sbjct  181  GSLAELIRRFEK  192

64) HSM_1379 in NC_010519


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  167 bits (618),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 96/185 (52%), Positives = 147/185 (80%), Gaps = 0/185 (0%)

Query  2    NIHlldddltildAASFLLEQAGYQVKTWSNSQQFVQQANIFEPGILLLDMKMPHLDGKA  61
             IHLLDDD ++ +A +FLLE  GY+VK W+++ +F+ QA+++++G++LLDM+MP LDG++
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  62   VHQFLQQQNSPFAVIIMTGHGDIQMAVQELKLGAVDFLQKPMQFSQLQSAIKLARKKTME  121
            VH+ L+Q  S +AV+++TGHGD+ MAV+++K GAVDFLQKP+    LQ+A+  A   +  
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  122  NYEQYQIKRCYKQLSTKELEVLSLLLKGYINRQIAETLNISVRTVEVHRSHIMEKMQAQT  181
               + +I  CY+QL+ KE E+ SL+ KG++NR+IAE++NI+VRTVEVHR+++MEKMQA +
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  182  VAELI  186
            +AELI
Sbjct  183  LAELI  187

65) ttrR in NC_008309


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  165 bits (610),  Expect = 1e-42, Method: Compositional matrix adjust.
 Identities = 95/185 (52%), Positives = 146/185 (79%), Gaps = 0/185 (0%)

Query  2    NIHlldddltildAASFLLEQAGYQVKTWSNSQQFVQQANIFEPGILLLDMKMPHLDGKA  61
             IHLLDDD ++ +A +FLLE  GY+VK W+++ +F+ QA+++++G++LLDM+MP LDG++
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  62   VHQFLQQQNSPFAVIIMTGHGDIQMAVQELKLGAVDFLQKPMQFSQLQSAIKLARKKTMD  121
            VH+ L+Q  S +AV+++TGHGD+ MAV+++K GAVDFLQKP+    LQ+A+  A   +  
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  122  NYEQYQIKRCYKQLSTKELEVLSLLLKGYINRQIAETLSISVRTVEVHRSHIMEKMQAQT  181
               + +I  CY+QL+ KE E+ SL+ KG++NR+IAE+++I+VRTVEVHR+++MEKMQA +
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  182  AAELI  186
             AELI
Sbjct  183  LAELI  187

66) NT08PM_0546 in NC_017764


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  165 bits (608),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 92/169 (55%), Positives = 134/169 (80%), Gaps = 0/169 (0%)

Query  18   FLLEQAGYQVQTWSNSQAFVNKAPLFEPGVVLLDMKMPLLDGHQVHQFLCQQQSTLAVVI  77
            FLLE  GY+V+ W+++  F+ +A+L+++GVVLLDM+MP+LDG+ VH+ L Q  STLAVV+
Sbjct  19   FLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGVHDALRQCGSTLAVVF  78

Query  78   MTAHADVPMAVQELKQGAVDFLQKPVQFSQLQSVLKTAIQTTQSRYERYKIRHCYAQLSR  137
            +T+H+DVPMAV+++K+GAVDFLQKPV    LQ+ L  A+  + +   R  I  CY QL+ 
Sbjct  79   LTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAAVARREIILCYQQLTP  138

Query  138  KELDILALLIQGCINRQIAEALNISVRTVEVHRSHIMEKMQAQTIAELI  186
            KE ++ +L+ +G +NR+IAEA+NI+VRTVEVHR+++MEKMQA ++AELI
Sbjct  139  KERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGSLAELI  187

67) ttrR in NC_017027


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  165 bits (608),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 92/169 (55%), Positives = 134/169 (80%), Gaps = 0/169 (0%)

Query  18   FLLEQAGYQVQTWSNSQAFVNKAPLFEPGVVLLDMKMPLLDGHQVHQFLCQQQSTLAVVI  77
            FLLE  GY+V+ W+++  F+ +A+L+++GVVLLDM+MP+LDG+ VH+ L Q  STLAVV+
Sbjct  19   FLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGVHDALRQCGSTLAVVF  78

Query  78   MTAHADVPMAVQELKQGAVDFLQKPVQFSQLQSVLKTAIQTTQSRYERYKIRHCYAQLSR  137
            +T+H+DVPMAV+++K+GAVDFLQKPV    LQ+ L  A+  + +   R  I  CY QL+ 
Sbjct  79   LTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAAVARREIILCYQQLTP  138

Query  138  KELDILALLIQGCINRQIAEALNISVRTVEVHRSHIMEKMQAQTIAELI  186
            KE ++ +L+ +G +NR+IAEA+NI+VRTVEVHR+++MEKMQA ++AELI
Sbjct  139  KERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGSLAELI  187

68) ttrR in NC_002663


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  165 bits (608),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 92/169 (55%), Positives = 134/169 (80%), Gaps = 0/169 (0%)

Query  18   FLLEQAGYQVQTWSNSQAFVNKAPLFEPGVVLLDMKMPLLDGHQVHQFLCQQQSTLAVVI  77
            FLLE  GY+V+ W+++  F+ +A+L+++GVVLLDM+MP+LDG+ VH+ L Q  STLAVV+
Sbjct  19   FLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGVHDALRQCGSTLAVVF  78

Query  78   MTAHADVPMAVQELKQGAVDFLQKPVQFSQLQSVLKTAIQTTQSRYERYKIRHCYAQLSR  137
            +T+H+DVPMAV+++K+GAVDFLQKPV    LQ+ L  A+  + +   R  I  CY QL+ 
Sbjct  79   LTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAAVARREIILCYQQLTP  138

Query  138  KELDILALLIQGCINRQIAEALNISVRTVEVHRSHIMEKMQAQTIAELI  186
            KE ++ +L+ +G +NR+IAEA+NI+VRTVEVHR+++MEKMQA ++AELI
Sbjct  139  KERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGSLAELI  187

69) ttrR in NC_008800


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  161 bits (593),  Expect = 3e-41, Method: Compositional matrix adjust.
 Identities = 95/160 (60%), Positives = 125/160 (79%), Gaps = 0/160 (0%)

Query  1    MKVWHEGDCFLAQADVYQPGVVLLDIRMPLLDGTAVYARMRQLNSTLAVIFLTAHGEVPQ  60
            +K W +G  FLAQA +YQ+GVVLLD+RMP+LDG +V   +RQ  STLAV+FLT+HG+VP 
Sbjct  28   VKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGVHDALRQCGSTLAVVFLTGHGDVPM  87

Query  61   AVEQMKLGAVDFLQKPVATAPLIAALQQGLVQSEQLVTRRQVELRYASLTPREQMIAQWV  120
            AVEQMK GAVDFLQKPV+  PL AAL+++L  S   V+RR++ L Y  LTP+E+ +A  V
Sbjct  88   AVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAAVARREIILCYQQLTPKERELASLV  147

Query  121  MQGLINRDIADRACVSVRTVEVHRAKVMEKMAVNSLAELV  160
             +G++NR+IA+   ++VRTVEVHRA+VMEKM   SLAEL+
Sbjct  148  AKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGSLAELI  187

70) Shewana3_0637 in NC_008577


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  148 bits (544),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 89/193 (47%), Positives = 128/193 (67%), Gaps = 0/193 (0%)

Query  6    PVYLIDDDESVRRSLRFMLESYGLNIRDFDSAEAFFAAIDLSQPGCALVDVRMPGLSGPQ  65
             + L+DDD +V  +  F+LES G +++    +  F+A   L Q+G  L+D+RMP L G  
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  66   LHAQLVQHNSPLAVIYLTGHGDVPMAVEALKLGAVDFFQKPADGAKLADAVVKALEHAKA  125
            +H  L Q  S LAV++LTGHGDVPMAVE +K GAVDF+QKP     L  A+ +AL  + A
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  126  HYQDNQYLQTYQTLTPREREILTLIAKGYKNQEIADTLCIAMRTVEIHRANLMKGMQVGS  185
                 + +  YQ LTP+ERE+ +L+AKG+ N+EIA+++ IA+RTVE+HRA +M  MQ GS
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  186  LAEMILIYGRIVD  198
            LAE+I  + ++  
Sbjct  183  LAELIRRFEKMAS  195

71) Shewana3_3697 in NC_008577


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  145 bits (535),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 82/193 (43%), Positives = 141/193 (74%), Gaps = 0/193 (0%)

Query  6    PLYLVDDDEAILDSLGFMLGQFGYQVQTFSSGRDFLAQCPLTQAGCVILDSRMPEITGQE  65
             + L+DDD A+ ++ +F+L  +GY+V+  + G DFLAQ +L QAG V+LD RMP + GQ 
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  66   VQQKLLETQSPLGVIFLTGHGDLPMALSAFRKGACDFFQKPVSGKALVQAIEKAHKESQA  125
            V++ L +  S L+V+FLTGHGD+PMA+   ++GA DF+QKPVS K+L  A+E+A   S A
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  126  SFEQQHLQQKFAQLTEREQQVLAHVVQGMTNKQISEAMYLSLRTIEVHRAKIMKKLEVSN  185
            +  ++++   + QLT +E+++ + V +G  N++I+EAM +++RT+EVHRA++M K++ ++
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  186  MAELVQHLAHLNA  198
            +AEL++++  + +
Sbjct  183  LAELIRRFEKMAS  195

72) Shewmr4_0637 in NC_008321


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  145 bits (532),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 88/193 (46%), Positives = 127/193 (66%), Gaps = 0/193 (0%)

Query  6    PVYLIDDDESVRRSLRFMLESYGLNIHDFDSAEAFFAAIDLSEPGCALVDVRMPGLSGPQ  65
             + L+DDD +V  +  F+LES G ++     +  F+A   L ++G  L+D+RMP L G  
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  66   LHAQLVQHNSPLAVIYLTGHGDVPMAVEALKLGAVDFFQKPADGAKLADAVVKALEHAKA  125
            +H  L Q  S LAV++LTGHGDVPMAVE +K GAVDF+QKP     L  A+ +AL  + A
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  126  YHQNNQYLQTYQALTPREREILILIAKGYKNQEIADTLCIAMRTVEIHRANLMKGMQVGS  185
                 + +  YQ LTP+ERE+  L+AKG+ N+EIA+++ IA+RTVE+HRA +M  MQ GS
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  186  LAEMMLIYGRIAD  198
            LAE++  + ++A 
Sbjct  183  LAELIRRFEKMAS  195

73) PBPRB0008 in NC_006371


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  144 bits (529),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 84/193 (44%), Positives = 138/193 (72%), Gaps = 0/193 (0%)

Query  5    PVFVVDDDESVRDSLAFMLEGYDFKVESYADGVTFLEQANIDQAGCVVLDIRMPIMMGQQ  64
             + ++DDD +V ++ AF+LE+ ++ V   ++G  FL QA++ QAG V+LD+RMP++ GQ 
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  65   VHRLLKDKHSPLVVIFLTGHGDVPMAVEALKHGAIDFFQKPVDGEKLVAAIRHAEKqslh  124
            VH  L++  S L V+FLTGHGDVPMAVE +K+GA+DF+QKPV    L AA+ +A   S  
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  125  nqsqqllhKAFETLTTREQELLGLLVKGYKNQQISDELCIAVRTVEVHRSSLMKKLHAKT  184
              +++ +   ++ LT +E+EL +L+ KG+ N++I++ + IAVRTVEVHR+ +M K++A +
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  185  IAELVMFYSQIKT  197
            +AEL+  + ++ +
Sbjct  183  LAELIRRFEKMAS  195

74) Sbal195_0467 in NC_009997


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  144 bits (529),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 83/194 (43%), Positives = 141/194 (73%), Gaps = 0/194 (0%)

Query  6    PLYLVDDDEAILDSLGFMLGQFGYQVQTFNSGRDFLAHCALSQAGCVILDSRMPEITGQE  65
             + L+DDD A+ ++ +F+L  +GY+V+    G DFLA+ +L QAG V+LD RMP + GQ 
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  66   VQQKLLETHSPLGVIFLTGHGDLPMALSAFRKGACDFFQKPVSGKALVQAIEKAQRESQA  125
            V++ L +  S L+V+FLTGHGD+PMA+   ++GA DF+QKPVS K+L  A+E+A   S A
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  126  AFEQQSLQHKFDQLTEREQQVLAHVIQGMTNKQISEAMFLSLRTIEVHRAKIMKKLEVNN  185
            A  ++ +   ++QLT +E+++ + V +G  N++I+EAM +++RT+EVHRA++M K++  +
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  186  MAELVQHLGNLHSA  199
            +AEL++++ ++ S+
Sbjct  183  LAELIRRFEKMASP  196

75) Sbal678_0474 in NC_016901


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  144 bits (529),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 83/194 (43%), Positives = 141/194 (73%), Gaps = 0/194 (0%)

Query  6    PLYLVDDDEAILDSLGFMLGQFGYQVQTFNSGRDFLAHCALSQAGCVILDSRMPEITGQE  65
             + L+DDD A+ ++ +F+L  +GY+V+    G DFLA+ +L QAG V+LD RMP + GQ 
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  66   VQQKLLETHSPLGVIFLTGHGDLPMALSAFRKGACDFFQKPVSGKALVQAIEKAQRESQA  125
            V++ L +  S L+V+FLTGHGD+PMA+   ++GA DF+QKPVS K+L  A+E+A   S A
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  126  AFEQQSLQHKFDQLTEREQQVLAHVIQGMTNKQISEAMFLSLRTIEVHRAKIMKKLEVNN  185
            A  ++ +   ++QLT +E+++ + V +G  N++I+EAM +++RT+EVHRA++M K++  +
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  186  MAELVQHLGNLHSA  199
            +AEL++++ ++ S+
Sbjct  183  LAELIRRFEKMASP  196

76) Shew185_0451 in NC_009665


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  144 bits (528),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 83/193 (44%), Positives = 140/193 (73%), Gaps = 0/193 (0%)

Query  6    PLYLVDDDEAILDSLGFMLGQFGYQVQTFNSGRDFLAHCALSQAGCVILDSRMPEITGQE  65
             + L+DDD A+ ++ +F+L  +GY+V+    G DFLA+ +L QAG V+LD RMP + GQ 
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  66   VQQKLLETHSPLGVIFLTGHGDLPMALSAFRKGACDFFQKPVSGKALVQAIEKAQRESQA  125
            V++ L +  S L+V+FLTGHGD+PMA+   ++GA DF+QKPVS K+L  A+E+A   S A
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  126  AFEQQSLQHKFDQLTEREQQVLAHVIQGMTNKQISEAMFLSLRTIEVHRAKIMKKLEVNN  185
            A  ++ +   ++QLT +E+++ + V +G  N++I+EAM +++RT+EVHRA++M K++  +
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  186  MAELVQHLGNLHS  198
            +AEL++++ ++ S
Sbjct  183  LAELIRRFEKMAS  195

77) ttrR in NC_004347


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  144 bits (528),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 82/195 (43%), Positives = 140/195 (72%), Gaps = 0/195 (0%)

Query  4    MLPLYLVDDDEAILDSLGFMLRQFGYQVQTFSSGRDFLAQCPLTQAGCVILDSRMPEITG  63
            M  + L+DDD A+ ++ +F+L  +GY+V+  + G DFLAQ +L QAG V+LD RMP + G
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  64   QEVQQKLLETQSPLGVIFLTGHGDLPMALSAFRKGACDFFQKPVSGKALVQAIKKAHKES  123
            Q V++ L +  S L+V+FLTGHGD+PMA+   ++GA DF+QKPVS K+L  A+ +A   S
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  124  QASFEQQSLQHKFAQLTDREQQVLAHVVQGMTNKQISEAMYLSLRTIEVHRAKIMKKLEV  183
             A+  ++ +   + QLT +E+++ + V +G  N++I+EAM +++RT+EVHRA++M K++ 
Sbjct  121  SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQA  180

Query  184  SNMAELVQHLAHLNT  198
            +++AEL++++  + +
Sbjct  181  GSLAELIRRFEKMAS  195

78) M892_00165 in NC_022269


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  143 bits (527),  Expect = 5e-36, Method: Compositional matrix adjust.
 Identities = 84/190 (45%), Positives = 137/190 (73%), Gaps = 6/190 (3%)

Query  7    SLYIVDDEEPVLESMAFLLESYGYEVETFSSGIDFLNEVNLFAPGCVLLDSRMPDLRGQD  66
            ++ ++DD+ +V ++ AFLLES GY+V   + G DFL + +L+ +G VLLD RMP L GQ+
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  67   VHQMMNEKLSPISVIYLTGHGDIPMAVDALKDGALDFFQKPVDGNALVMAVDDAMVQSLK  126
            VH+ + +  S ++V++LTGHGD+PMAV+ +K GA+DF+QKPV  ++L  A++ A+  S  
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS--  120

Query  127  NDEKLGAKQVL---QSLTKREREVLGLVVKGMKNQEMADLLCVSLRTVEVHRSNVMKKLE  183
                ++ ++++   Q LT +ERE+ +LV KG  N+E+A+ + +++RTVEVHR+ VM K++
Sbjct  121  -SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQ  179

Query  184  AESLAVLIHK  193
            A SLA LI++
Sbjct  180  AGSLAELIRR  189

79) VIBHAR_02672 in NC_009783


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  143 bits (527),  Expect = 5e-36, Method: Compositional matrix adjust.
 Identities = 84/190 (45%), Positives = 137/190 (73%), Gaps = 6/190 (3%)

Query  7    SLYIVDDEEPVLESMAFLLESYGYEVETFSSGIDFLNEVNLFAPGCVLLDSRMPDLRGQD  66
            ++ ++DD+ +V ++ AFLLES GY+V   + G DFL + +L+ +G VLLD RMP L GQ+
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  67   VHQMMNEKLSPISVIYLTGHGDIPMAVDALKDGALDFFQKPVDGNALVMAVDDAMVQSLK  126
            VH+ + +  S ++V++LTGHGD+PMAV+ +K GA+DF+QKPV  ++L  A++ A+  S  
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS--  120

Query  127  NDEKLGAKQVL---QSLTKREREVLGLVVKGMKNQEMADLLCVSLRTVEVHRSNVMKKLE  183
                ++ ++++   Q LT +ERE+ +LV KG  N+E+A+ + +++RTVEVHR+ VM K++
Sbjct  121  -SAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQ  179

Query  184  AESLAVLIHK  193
            A SLA LI++
Sbjct  180  AGSLAELIRR  189

80) Sbal117_4020 in NC_017579


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  143 bits (527),  Expect = 5e-36, Method: Compositional matrix adjust.
 Identities = 81/193 (42%), Positives = 139/193 (73%), Gaps = 0/193 (0%)

Query  6    PLYLVDDDEAILDSLGFMLGQFGYQVQTFNSGRDFLAHCALSQAGCVILDSRMPEITGQE  65
             + L+DDD A+ ++ +F+L  +GY+V+    G DFLA+ +L QAG V+LD RMP + GQ 
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  66   VQQKLIETHSPLGVIFLTGHGDLPMALSAFRKGACDFFQKPVSGKALVQAIEKAQRESQT  125
            V++ L +  S L+V+FLTGHGD+PMA+   ++GA DF+QKPVS K+L  A+E+A   S +
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  126  TFEQQSLQHKFDQLTEREQQVLAHVIQGMTNKQISEAMFLSLRTIEVHRAKIMKKLEVNN  185
            +  ++ +   ++QLT +E+++ + V +G  N++I+EAM +++RT+EVHRA++M K++  +
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  186  MAELVQHLGHLHS  198
            +AEL++++  + S
Sbjct  183  LAELIRRFEKMAS  195

81) Sbal_3862 in NC_009052


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  143 bits (527),  Expect = 5e-36, Method: Compositional matrix adjust.
 Identities = 81/193 (42%), Positives = 139/193 (73%), Gaps = 0/193 (0%)

Query  6    PLYLVDDDEAILDSLGFMLGQFGYQVQTFNSGRDFLAHCALSQAGCVILDSRMPEITGQE  65
             + L+DDD A+ ++ +F+L  +GY+V+    G DFLA+ +L QAG V+LD RMP + GQ 
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  66   VQQKLIETHSPLGVIFLTGHGDLPMALSAFRKGACDFFQKPVSGKALVQAIEKAQRESQT  125
            V++ L +  S L+V+FLTGHGD+PMA+   ++GA DF+QKPVS K+L  A+E+A   S +
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  126  TFEQQSLQHKFDQLTEREQQVLAHVIQGMTNKQISEAMFLSLRTIEVHRAKIMKKLEVNN  185
            +  ++ +   ++QLT +E+++ + V +G  N++I+EAM +++RT+EVHRA++M K++  +
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  186  MAELVQHLGHLHS  198
            +AEL++++  + S
Sbjct  183  LAELIRRFEKMAS  195

82) Shewmr7_0436 in NC_008322


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  143 bits (527),  Expect = 5e-36, Method: Compositional matrix adjust.
 Identities = 81/193 (42%), Positives = 138/193 (72%), Gaps = 0/193 (0%)

Query  6    PLYLVDDDEAILDSLGFMLGQFGYQVQTFNSGRNFLAQCPLTQAGCVILDSRMPEITGQE  65
             + L+DDD A+ ++ +F+L  +GY+V+    G +FLAQ +L QAG V+LD RMP + GQ 
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  66   VQQKLLETQSPLGVIFLTGHGDLPMALSAFRKGACDFFQKPVSGKALVQAIEKAHRESQA  125
            V++ L +  S L+V+FLTGHGD+PMA+   ++GA DF+QKPVS K+L  A+E+A   S A
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  126  NFEQQSLQHKFAQLTEREQQVLTHVIQGMTNKQISEAMYLSLRTIEVHRAKIMKKLEVSN  185
               ++ +   + QLT +E+++ + V +G  N++I+EAM +++RT+EVHRA++M K++ ++
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  186  MAELVQHLAHLNT  198
            +AEL++++  + +
Sbjct  183  LAELIRRFEKMAS  195

83) Sbal223_0478 in NC_011663


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  143 bits (526),  Expect = 6e-36, Method: Compositional matrix adjust.
 Identities = 83/193 (44%), Positives = 139/193 (73%), Gaps = 0/193 (0%)

Query  6    PLYLVDDDEAILDSLGFMLGQFGYQVQTFNSGRDFLAHCALSQAGCVILDSRMPEITGQE  65
             + L+DDD A+ ++ +F+L  +GY+V+    G DFLA+ +L QAG V+LD RMP + GQ 
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  66   VQQKLLETHSPLGVIFLTGHGDLPMALSAFRKGACDFFQKPVSGKALVQAIEKAQRESQA  125
            V++ L +  S L+V+FLTGHGD+PMA+   ++GA DF+QKPVS K+L  A+E+A   S A
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  126  AFEQQSLQHKFDQLTEREQQVLAHVIQGMTNKQISEAMFLSLRTIEVHRAKIMKKLEVNN  185
            A  ++ +   ++QLT +E+++ + V +G  N++I+EAM +++RT+EVHRA++M K++  +
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  186  MAELVQHLGHLHS  198
            +AEL++++  + S
Sbjct  183  LAELIRRFEKMAS  195

84) Sbal175_0544 in NC_017571


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  142 bits (522),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 80/193 (42%), Positives = 140/193 (73%), Gaps = 0/193 (0%)

Query  6    PLYLVDDDEAILDSLGFMLGQFGYQIQTFNSGRDFLAHCALSQAGCVILDSRMPEITGQE  65
             + L+DDD A+ ++ +F+L  +GY+++    G DFLA+ +L QAG V+LD RMP + GQ 
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  66   VQQKLLETHSPLGVIFLTGHGDLPMALSAFRKGACDFFQKPVSGKALVQAIEKAQRESQT  125
            V++ L +  S L+V+FLTGHGD+PMA+   ++GA DF+QKPVS K+L  A+E+A   S +
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  126  TFEQQSLQHKFDQLTEREQQVLAHVIQGMTNKQISEAMFLSLRTIEVHRAKIMKKLKVNN  185
            +  ++ +   ++QLT +E+++ + V +G  N++I+EAM +++RT+EVHRA++M K++  +
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  186  MAELVQHLGNLHS  198
            +AEL++++ ++ S
Sbjct  183  LAELIRRFEKMAS  195

85) M636_15785 in NC_021848


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 84/190 (45%), Positives = 133/190 (70%), Gaps = 2/190 (1%)

Query  5    LCPLYIVDDEVPVLESMAFMLESYGYSVDVYSNGQDFLQSVNLHQAGCVLLDSRMPEMRG  64
            +  + ++DD+ +V ++ AF+LES GY V   ++G DFL   +L QAG VLLD RMP + G
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  65   QELHLLMRNQCSP-ISVIYLTGHGDIPMAVEALKEGALDFFQKPVDGNALVAAIDNAMEC  123
            Q +H  +R QC++ ++V++LTGHGD+PMAVE +K GA+DF+QKPV  ++L AA++ A+  
Sbjct  61   QGVHDALR-QCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTV  119

Query  124  SLKNQEKQSAKLTLQSLTRREKEVLILVVKGMKNQDMANQLCVSLRTIEVHRSNVMKKLE  183
            S     ++   L  Q LT +E+E+  LV KG  N+++A+ + +++RT+EVHR+ VM K++
Sbjct  120  SSAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQ  179

Query  184  VESLAALIHK  193
              SLA LI++
Sbjct  180  AGSLAELIRR  189

86) VP1202 in NC_004603


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 84/190 (45%), Positives = 133/190 (70%), Gaps = 2/190 (1%)

Query  5    LCPLYIVDDEVPVLESMAFMLESYGYSVDVYSNGQDFLQSVNLHQAGCVLLDSRMPEMRG  64
            +  + ++DD+ +V ++ AF+LES GY V   ++G DFL   +L QAG VLLD RMP + G
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  65   QELHLLMRNQCSP-ISVIYLTGHGDIPMAVEALKEGALDFFQKPVDGNALVAAIDNAMEC  123
            Q +H  +R QC++ ++V++LTGHGD+PMAVE +K GA+DF+QKPV  ++L AA++ A+  
Sbjct  61   QGVHDALR-QCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTV  119

Query  124  SLKNQEKQSAKLTLQSLTRREKEVLILVVKGMKNQDMANQLCVSLRTIEVHRSNVMKKLE  183
            S     ++   L  Q LT +E+E+  LV KG  N+++A+ + +++RT+EVHR+ VM K++
Sbjct  120  SSAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQ  179

Query  184  VESLAALIHK  193
              SLA LI++
Sbjct  180  AGSLAELIRR  189

87) VPBB_1128 in NC_019955


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 83/190 (44%), Positives = 134/190 (71%), Gaps = 2/190 (1%)

Query  5    LCPLYIVDDEVPVLESMAFMLESYGYSVDVYSNGQDFLQRVNLHQAGCVLLDSRMPEMRG  64
            +  + ++DD+ +V ++ AF+LES GY V   ++G DFL + +L QAG VLLD RMP + G
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  65   QELHLLMRNQCSP-ISVIYLTGHGDIPMAVDALKEGALDFFQKPVDGNALVAAIDNAMEC  123
            Q +H  +R QC++ ++V++LTGHGD+PMAV+ +K GA+DF+QKPV  ++L AA++ A+  
Sbjct  61   QGVHDALR-QCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTV  119

Query  124  SLKNQEKQSAKLTLQSLTRREKEVLILVVKGMKNQDMANQLCVSLRTIEVHRSNVMKKLE  183
            S     ++   L  Q LT +E+E+  LV KG  N+++A+ + +++RT+EVHR+ VM K++
Sbjct  120  SSAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQ  179

Query  184  VESLAALIHK  193
              SLA LI++
Sbjct  180  AGSLAELIRR  189

88) M634_07920 in NC_021847


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  141 bits (518),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 82/190 (44%), Positives = 133/190 (70%), Gaps = 2/190 (1%)

Query  5    LCPLYIVDDEVPVLESMAFMLESYGYSVDVYSNGQDFLQSVNLHQAGCVLLDSRMPEMRG  64
            +  + ++DD+ +V ++ AF+LES GY V   ++G DFL   +L QAG VLLD RMP + G
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDG  60

Query  65   QELHLLMRNQCSP-ISVIYLTGHGDIPMAVDALKEGALDFFQKPVDGNALVAAIDNAMEC  123
            Q +H  +R QC++ ++V++LTGHGD+PMAV+ +K GA+DF+QKPV  ++L AA++ A+  
Sbjct  61   QGVHDALR-QCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTV  119

Query  124  SLKNQEKQSAKLTLHSLTRREKEVLILVVKGMKNQDMANQLCVSLRTIEVHRSNVMKKLE  183
            S     ++   L  + LT +E+E+  LV KG  N+++A+ + +++RT+EVHR+ VM K++
Sbjct  120  SSAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQ  179

Query  184  VESLAALIHK  193
              SLA LI++
Sbjct  180  AGSLAELIRR  189

89) Shewmr4_3517 in NC_008321


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  141 bits (519),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 82/192 (43%), Positives = 139/192 (73%), Gaps = 0/192 (0%)

Query  7    LYLVDDDEAILDSLGFMLGQFGYQVQTFSSGRDFLAQCPLTQAGCVILDSRMPEITGQEV  66
            + L+DDD A+ ++ +F+L  +GY+V+  + G DFLAQ +L QAG V+LD RMP + GQ V
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGV  63

Query  67   QQKLLETQSPLGVIFLTGHGDLPMALSAFRKGACDFFQKPVSGKALVQAIEKAHKESQAS  126
            ++ L +  S L+V+FLTGHGD+PMA+   ++GA DF+QKPVS K+L  A+E+A   S A+
Sbjct  64   HDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAA  123

Query  127  FEQLYLQQKFAQLTEREQQVLAHVVQGMTNKQISEAMYLSLRTIEVHRAKIMKKLEVSNM  186
              +  +   + QLT +E+++ + V +G  N++I+EAM +++RT+EVHRA++M K++ +++
Sbjct  124  VARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGSL  183

Query  187  AELVQHLAHLNA  198
            AEL++++  + +
Sbjct  184  AELIRRFEKMAS  195

90) Sput200_0457 in NC_017566


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  141 bits (519),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 81/193 (42%), Positives = 139/193 (73%), Gaps = 0/193 (0%)

Query  6    PLYLVDDDDAILDSLGFMLRQFGYQVQTFNNGRDFLEQCPLSEAGCVILDSRMPEITGQE  65
             + L+DDD A+ ++ +F+L  +GY+V+   +G DFL Q +L +AG V+LD RMP + GQ 
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  66   VQQKLIETHSPLGVIFLTGHGDLPMALSAFRKGACDFFQKPVSGKALVQAIEKAQCESLA  125
            V++ L +  S L+V+FLTGHGD+PMA+   ++GA DF+QKPVS K+L  A+E+A   S A
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  126  TFEKQSLQHKFDQLTEREQQVLAHVIQGMTNKQISEAMFLSLRTIEVHRAKIMKKLEVNN  185
            +  ++ +   ++QLT +E+++ + V +G  N++I+EAM +++RT+EVHRA++M K++  +
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  186  MAELVQHLGSLNS  198
            +AEL++++  + S
Sbjct  183  LAELIRRFEKMAS  195

91) Sputcn32_0534 in NC_009438


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 81/193 (42%), Positives = 140/193 (73%), Gaps = 0/193 (0%)

Query  6    PLYLVDDDDAILDSLGFMLRQFGYQVQTFNNGRDFLEQCPLSEAGCVILDSRMPEITGQE  65
             + L+DDD A+ ++ +F+L  +GY+V+   +G DFL Q +L +AG V+LD RMP + GQ 
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  66   VQQKLIETHSPLGVIFLTGHGDLPMALSAFRKGACDFFQKPVSGKALVQAIEKAQCESLA  125
            V++ L +  S L+V+FLTGHGD+PMA+   ++GA DF+QKPVS K+L  A+E+A   S A
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  126  TFEKQSLQHKFDQLTEREQQVLAHVIQGMTNKQISEAMFLSLRTIEVHRAKIMKKLEVNN  185
            +  ++ +   ++QLT +E+++ + V +G  N++I+EAM +++RT+EVHRA++M K++  +
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  186  MAELVQHLGNLNS  198
            +AEL++++ ++ S
Sbjct  183  LAELIRRFEKMAS  195

92) Sputw3181_3638 in NC_008750


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  141 bits (519),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 81/193 (42%), Positives = 139/193 (73%), Gaps = 0/193 (0%)

Query  6    PLYLVDDDDAILDSLGFMLRQFGYQVQTFNNGRDFLEQCPLSEAGCVILDSRMPEITGQE  65
             + L+DDD A+ ++ +F+L  +GY+V+   +G DFL Q +L +AG V+LD RMP + GQ 
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  66   VQQKLIETHSPLGVIFLTGHGDLPMALSAFRKGACDFFQKPVSGKALVQAIEKAQCESLA  125
            V++ L +  S L+V+FLTGHGD+PMA+   ++GA DF+QKPVS K+L  A+E+A   S A
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  126  TFEKQSLQHKFDQLTEREQQVLAHVIQGMTNKQISEAMFLSLRTIEVHRAKIMKKLEVNN  185
            +  ++ +   ++QLT +E+++ + V +G  N++I+EAM +++RT+EVHRA++M K++  +
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  186  MAELVQHLGSLNS  198
            +AEL++++  + S
Sbjct  183  LAELIRRFEKMAS  195

93) GU3_08305 in NC_016745


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  136 bits (498),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 85/185 (46%), Positives = 124/185 (68%), Gaps = 0/185 (0%)

Query  3    IYLLDDDPQVLAANGFLLKAMGFESTGWSEPTRFLEEFDGNAEAVLLLDLAMPEMDGLEV  62
            I LLDDD  V  A +FLL ++G++   W++ + FL +      +V+LLD+ MP +DG  V
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGV  63

Query  63   LAQLNRRQSPVAVVLLTGHGDVPQAVEAMKLGAVDFLEKPVDARRLAEVLARAKEQAREL  122
               L +  S +AVV+LTGHGDVP AVE MK GAVDFL+KPV  + L   L RA   +   
Sbjct  64   HDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAA  123

Query  123  DARSQARQRVARLSAREHEVVSLVAQGLTNKAIAESLCVAVRTVEVHRASAMTKLEAANM  182
             AR +      +L+++E+E+ SLVA+G+ N+ IAE++ +AVRTVEVHRA  M K++A+++
Sbjct  124  VARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGSL  183

Query  183  AELLH  187
            AEL++
Sbjct  184  AELIR  188

94) Fbal_3634 in NC_014541


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  135 bits (496),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 84/194 (44%), Positives = 132/194 (69%), Gaps = 1/194 (0%)

Query  5    PAIYLVDDDSAILDSLGFLMESYGLPLTPYNDGERFLQEVDLSQPGCVILDSRMPGLSGQ  64
            ++I L+DDD+A+ ++ +FL+ES G  +    +G  FL +  L Q+G V+LD RMP L GQ
Sbjct  2    ATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQ  61

Query  65   DLQRRLVAANSPLAVIFLTGHGDVPMAVDAFKSGAFDFFQKPVKGQDLAAALRKGLEHSQ  124
            +++  L    S LAV+FLTGHGDVPMAV+  K GA DF+QKPV  + L AAL ++L  S 
Sbjct  62   GVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSS  121

Query  125  SRYDQQQQRARLDSLSEREREVFKLVIKGHTNKQMADSLCVAVRTIEVHRANLMKKLEVD  184
            +   +++     + L+ +ERE+  LV KG  N+++A+++ +AVRT+EVHRA +M K++ +
Sbjct  122  AAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAG  181

Query  185  SLAALM-QFANLDT  197
            SLA L+ +F ++ +
Sbjct  182  SLAELIRRFEKMAS  195

95) Sput200_0597 in NC_017566


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  135 bits (494),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 85/193 (45%), Positives = 126/193 (66%), Gaps = 0/193 (0%)

Query  6    PVYLIDDDDSVRRSLRFMLESYGLKITDFDSAEAFFTAVDLTLPGCALVDVRMPGLSGQQ  65
             + L+DDD +V  +  F+LES G  +     +  F++   L  +G  L+D+RMP L GQ 
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  66   LHLELVAKNSPLAVIYLTGHGDVPMAVDALKLGAVDFFQKPADGAKLAEAVVKALEHTKA  125
            +H  L    S LAV++LTGHGDVPMAV+ +K GAVDF+QKP     L  A+ +AL  + A
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  126  HHQDNQYLETYQALTPREREILNLIAQGLKNQEIADSLCIAMRTVEIHRANLMKGMQVGS  185
                 + +  YQ LTP+ERE+ +L+A+G+ N+EIA+++ IA+RTVE+HRA +M  MQ GS
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  186  LAEMMLIYSRIAE  198
            LAE++  + ++A 
Sbjct  183  LAELIRRFEKMAS  195

96) Sputw3181_3508 in NC_008750


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  135 bits (494),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 85/193 (45%), Positives = 126/193 (66%), Gaps = 0/193 (0%)

Query  6    PVYLIDDDDSVRRSLRFMLESYGLKITDFDSAEAFFTAVDLTLPGCALVDVRMPGLSGQQ  65
             + L+DDD +V  +  F+LES G  +     +  F++   L  +G  L+D+RMP L GQ 
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  66   LHLELVAKNSPLAVIYLTGHGDVPMAVDALKLGAVDFFQKPADGAKLAEAVVKALEHTKA  125
            +H  L    S LAV++LTGHGDVPMAV+ +K GAVDF+QKP     L  A+ +AL  + A
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  126  HHQDNQYLETYQALTPREREILNLIAQGLKNQEIADSLCIAMRTVEIHRANLMKGMQVGS  185
                 + +  YQ LTP+ERE+ +L+A+G+ N+EIA+++ IA+RTVE+HRA +M  MQ GS
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  186  LAEMMLIYSRIAE  198
            LAE++  + ++A 
Sbjct  183  LAELIRRFEKMAS  195

97) Sbal223_3675 in NC_011663


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  134 bits (491),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 85/193 (45%), Positives = 125/193 (65%), Gaps = 0/193 (0%)

Query  6    PVYLIDDDDSVRRSLRFMLESYGLKITDFDSAEAFFTAVDLTLPGCALVDVRMPGLSGPQ  65
             + L+DDD +V  +  F+LES G  +     +  F++   L  +G  L+D+RMP L G  
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  66   LHLELVAKNSPLAVIYLTGHGDVPMAVEALKLGAVDFFQKPADGAKLAEAVVKALEHTKA  125
            +H  L    S LAV++LTGHGDVPMAVE +K GAVDF+QKP     L  A+ +AL  + A
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  126  HHQDNQYLETYQALTPREREILNLIAQGLKNQEIADSLCIAMRTVEIHRANLMKGMQVGS  185
                 + +  YQ LTP+ERE+ +L+A+G+ N+EIA+++ IA+RTVE+HRA +M  MQ GS
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  186  LAEMMLIYSRIAD  198
            LAE++  + ++A 
Sbjct  183  LAELIRRFEKMAS  195

98) Sputcn32_0666 in NC_009438


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  134 bits (492),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 85/193 (45%), Positives = 126/193 (66%), Gaps = 0/193 (0%)

Query  6    PVYLIDDDDSVRRSLRFMLESYGLKIIDFDSAEAFFTAVDLTLPGCALVDVRMPGLSGQQ  65
             + L+DDD +V  +  F+LES G  +     +  F++   L  +G  L+D+RMP L GQ 
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  66   LHLELVAKNSPLAVIYLTGHGDVPMAVDALKLGAVDFFQKPADGAKLAEAVVKALEHTKA  125
            +H  L    S LAV++LTGHGDVPMAV+ +K GAVDF+QKP     L  A+ +AL  + A
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  126  HHQDNQYLETYQALTPREREILNLIAQGLKNQEIADSLCIAMRTVEIHRANLMKGMQVGS  185
                 + +  YQ LTP+ERE+ +L+A+G+ N+EIA+++ IA+RTVE+HRA +M  MQ GS
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  186  LAEMMLIYSRIAE  198
            LAE++  + ++A 
Sbjct  183  LAELIRRFEKMAS  195

99) Shew185_3732 in NC_009665


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  134 bits (490),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 85/193 (45%), Positives = 125/193 (65%), Gaps = 0/193 (0%)

Query  6    PVYLIDDDDSVRRSLRFMLESYGLKITDFDSAEAFFTTVDLTLPGCALVDVRMPGLSGPQ  65
             + L+DDD +V  +  F+LES G  +     +  F++   L  +G  L+D+RMP L G  
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  66   LHLELVAKNSPLAVIYLTGHGDVPMAVEALKLGAVDFFQKPADGAKLAEAVVKALEHTKA  125
            +H  L    S LAV++LTGHGDVPMAVE +K GAVDF+QKP     L  A+ +AL  + A
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  126  HHQDNQYLETYQALTPREREILNLIAQGLKNQEIADSLCIAMRTVEIHRANLMKGMQVGS  185
                 + +  YQ LTP+ERE+ +L+A+G+ N+EIA+++ IA+RTVE+HRA +M  MQ GS
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  186  LAEMMLIYSRIAD  198
            LAE++  + ++A 
Sbjct  183  LAELIRRFEKMAS  195

100) VEJY3_10460 in NC_016613


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  134 bits (490),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 82/192 (43%), Positives = 125/192 (66%), Gaps = 0/192 (0%)

Query  9    PVYVVDDDESVRDSLAFMLEEHDFSVTTFADGQAFLDAVDIQQAGCVILDSRMPNLRGQQ  68
             + ++DDD +V ++ AF+LE  ++ V   ++G  FL    + QAG V+LD RMP L GQ 
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  69   VHQILNDANSPLAVIYLTGHGDVPMAVDALQAGAVNFFQKPVKGDALAQAILQGQVQSAA  128
            VH+ L +  S LAV++LTGHGDVPMAV+ ++ GAV+F+QKPV   +L  A+ ++   S+A
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  129  SFDMAGAKLAYESLTPREKDILRLIIEGKRNIRIADELCIAMRTVEVHRASLLKKFSAKT  188
            +       L Y+ LTP+E+++  L+  G  N  IA+ + IA+RTVEVHRA ++ K  A +
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  189  VAELAYIYGKLA  200
            +AEL   + K+A
Sbjct  183  LAELIRRFEKMA  194

101) M634_12245 in NC_021847


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  134 bits (490),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 82/194 (43%), Positives = 128/194 (66%), Gaps = 0/194 (0%)

Query  9    PVYVVDDDESVRDSLAFMLEEHDFNVTTFADGQSFLDEVNIHQAGCVLLDSRMPNLRGQQ  68
             + ++DDD +V ++ AF+LE  +++V   ++G  FL + ++ QAG VLLD RMP L GQ 
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  69   VHQFLNEAYSPLAVIYLTGHGDVPMAVDALQAGAVNFFQKPVKGDELAQAILHGQMQSAA  128
            VH+ L +  S LAV++LTGHGDVPMAV+ ++ GAV+F+QKPV    L  A+ ++   S+A
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  129  SLDMVAARAAYESLTPREKDILRLIIAGKRNIRIADELCIAMRTVEVHRASLLKKFSAKT  188
            ++        Y+ LTP+E+++  L+  G  N  IA+ + IA+RTVEVHRA ++ K  A +
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  189  VAELAYIYGKLENP  202
            +AEL   + K+ +P
Sbjct  183  LAELIRRFEKMASP  196

102) VPBB_1846 in NC_019955


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  133 bits (489),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 81/194 (42%), Positives = 128/194 (66%), Gaps = 0/194 (0%)

Query  9    PVYVVDDDESVRDSLAFMLEEHDFNVTTFADGQSFLDEVNIHQAGCVILDSRMPNLRGQQ  68
             + ++DDD +V ++ AF+LE  +++V   ++G  FL + ++ QAG V+LD RMP L GQ 
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  69   VHQFLNEAHSPLAVIYLTGHGDVPMAVDALQAGAVNFFQKPVKGDELAQAILHGQMQSAA  128
            VH+ L +  S LAV++LTGHGDVPMAV+ ++ GAV+F+QKPV    L  A+ ++   S+A
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  129  SLDMVAARAAYESLTPREKDILRLIIAGKRNIRIADELCIAMRTVEVHRASLLKKFSAKT  188
            ++        Y+ LTP+E+++  L+  G  N  IA+ + IA+RTVEVHRA ++ K  A +
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  189  VAELAYIYGKLENP  202
            +AEL   + K+ +P
Sbjct  183  LAELIRRFEKMASP  196

103) M636_11785 in NC_021848


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  133 bits (489),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 81/194 (42%), Positives = 128/194 (66%), Gaps = 0/194 (0%)

Query  9    PVYVVDDDESVRDSLAFMLEEHDFNVTTFADGQSFLDEVNIHQAGCVILDSRMPNLRGQQ  68
             + ++DDD +V ++ AF+LE  +++V   ++G  FL + ++ QAG V+LD RMP L GQ 
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  69   VHQFLNEAHSPLAVIYLTGHGDVPMAVDALQAGAVNFFQKPVKGDELAQAILHGQMQSAA  128
            VH+ L +  S LAV++LTGHGDVPMAV+ ++ GAV+F+QKPV    L  A+ ++   S+A
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  129  SLDMVAARAAYESLTPREKDILRLIIAGKRNIRIADELCIAMRTVEVHRASLLKKFSAKT  188
            ++        Y+ LTP+E+++  L+  G  N  IA+ + IA+RTVEVHRA ++ K  A +
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  189  VAELAYIYGKLENP  202
            +AEL   + K+ +P
Sbjct  183  LAELIRRFEKMASP  196

104) VP2009 in NC_004603


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  133 bits (489),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 81/194 (42%), Positives = 128/194 (66%), Gaps = 0/194 (0%)

Query  9    PVYVVDDDESVRDSLAFMLEEHDFNVTTFADGQSFLDEVNIHQAGCVILDSRMPNLRGQQ  68
             + ++DDD +V ++ AF+LE  +++V   ++G  FL + ++ QAG V+LD RMP L GQ 
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  69   VHQFLNEAHSPLAVIYLTGHGDVPMAVDALQAGAVNFFQKPVKGDELAQAILHGQMQSAA  128
            VH+ L +  S LAV++LTGHGDVPMAV+ ++ GAV+F+QKPV    L  A+ ++   S+A
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  129  SLDMVAARAAYESLTPREKDILRLIIAGKRNIRIADELCIAMRTVEVHRASLLKKFSAKT  188
            ++        Y+ LTP+E+++  L+  G  N  IA+ + IA+RTVEVHRA ++ K  A +
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  189  VAELAYIYGKLENP  202
            +AEL   + K+ +P
Sbjct  183  LAELIRRFEKMASP  196

105) Spea_3041 in NC_009901


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  133 bits (489),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 77/190 (41%), Positives = 126/190 (67%), Gaps = 6/190 (3%)

Query  7    GPVYLVDDDEAIIDSISFLMEGFGYQLRSFNSGDRFLKEVDLTLAGCVILDARMPGLTGP  66
            + + L+DDD A+ ++ +FL+E++GY+++    G  FL +  L  AG V+LD RMP L G 
Sbjct  2    ATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQ  61

Query  67   QVQQLLSDANSPLAVIFLTGHGDVPMAVDAFKNGAFDFFQKPVQGSILAQAIAKGLTNSL  126
             V++ L +  S LAV+FLTGHGDVPMAV+  K GA DF+QKPV    L  A+ ++LT S 
Sbjct  62   GVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSS  121

Query  127  EQHLKLTDQALI---DTLSEREAQIFQLVIAGNTNKQMANELCVAIRTIEVHRSKLMTKL  183
                 ++ + +I   + L+ +E ++  LV  G  N+++A+ + +A+RT+EVHR+++M K+
Sbjct  122  AA---VARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKM  178

Query  184  GVSNLAELVK  193
              ++LAEL++
Sbjct  179  QAGSLAELIR  188

106) Shal_3129 in NC_010334


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  133 bits (488),  Expect = 5e-33, Method: Compositional matrix adjust.
 Identities = 78/187 (42%), Positives = 122/187 (66%), Gaps = 0/187 (0%)

Query  7    GPVYLVDDDEAIIDSIDFLMEGYGYKLNSFNCGDRFLAEVDLTQAGCVILDARMPGLTGP  66
            + + L+DDD A+ ++  FL+E+ GY ++    G  FLA+  L QAG V+LD RMP L G 
Sbjct  2    ATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQ  61

Query  67   QVQQLLSDAKSPLAVIFLTGHGDVPMAVDAFKNGAFDFFQKPVPGSLLSQSIAKGLTYSI  126
             V++ L +  S LAV+FLTGHGDVPMAV+  K GA DF+QKPV+   L  ++ ++LT S 
Sbjct  62   GVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSS  121

Query  127  DQHLKRTNQALIDTLSEREAQIFQLVIAGNTNKQMANELCVAIRTIEVHRSKLMTKLGVN  186
                +R      + L+ +E ++  LV  G  N+++A+ + +A+RT+EVHR+++M K+   
Sbjct  122  AAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAG  181

Query  187  NLAELVK  193
            +LAEL++
Sbjct  182  SLAELIR  188

107) Sbal195_3858 in NC_009997


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  133 bits (488),  Expect = 6e-33, Method: Compositional matrix adjust.
 Identities = 84/193 (44%), Positives = 124/193 (65%), Gaps = 0/193 (0%)

Query  6    PVYLIDDDDSVRRSLRFMLESYGLKITDFDSAEAFFTAVDLTLPGCALVDVRMPGLSGPQ  65
             + L+DDD +V  +  F+LES G  +     +  F++   L  +G  L+D+RMP L G  
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  66   LHLELVSKNSPLAVIYLTGHGDVPMAVEALKLGAVDFFQKPADGAKLAEAVVKALEHAKT  125
            +H  L    S LAV++LTGHGDVPMAVE +K GAVDF+QKP     L  A+ +AL  + +
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  126  HYQDNQYLETYQALTPREREILNLIAQGLKNQEIADNLCIAMRTVEIHRANLMKGMQVGS  185
                 + +  YQ LTP+ERE+ +L+A+G+ N+EIA+ + IA+RTVE+HRA +M  MQ GS
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  186  LAEMMLIYSRIAE  198
            LAE++  + ++A 
Sbjct  183  LAELIRRFEKMAS  195

108) Sbal678_3888 in NC_016901


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  133 bits (488),  Expect = 6e-33, Method: Compositional matrix adjust.
 Identities = 84/193 (44%), Positives = 124/193 (65%), Gaps = 0/193 (0%)

Query  6    PVYLIDDDDSVRRSLRFMLESYGLKITDFDSAEAFFTAVDLTLPGCALVDVRMPGLSGPQ  65
             + L+DDD +V  +  F+LES G  +     +  F++   L  +G  L+D+RMP L G  
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  66   LHLELVSKNSPLAVIYLTGHGDVPMAVEALKLGAVDFFQKPADGAKLAEAVVKALEHAKT  125
            +H  L    S LAV++LTGHGDVPMAVE +K GAVDF+QKP     L  A+ +AL  + +
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  126  HYQDNQYLETYQALTPREREILNLIAQGLKNQEIADNLCIAMRTVEIHRANLMKGMQVGS  185
                 + +  YQ LTP+ERE+ +L+A+G+ N+EIA+ + IA+RTVE+HRA +M  MQ GS
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  186  LAEMMLIYSRIAE  198
            LAE++  + ++A 
Sbjct  183  LAELIRRFEKMAS  195

109) AHA_3289 in NC_008570


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  132 bits (483),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 88/198 (45%), Positives = 138/198 (70%), Gaps = 5/198 (2%)

Query  7    PPLYLVDDDEAVLDSLRFMLES--CDERQLFSFADGERFLAEVDLHQPACLILDCRMPGL  64
            + + L+DDD AV ++  F+LES   D +     ++G  FLA+  L Q++ ++LD RMP L
Sbjct  2    ATIHLLDDDTAVTNACAFLLESLGYDVK---CWTQGADFLAQASLYQAGVVLLDMRMPVL  58

Query  65   SGPEVQQRLKAAQSPIAILFLTGHGEVPLAVESLKLGAVDFLQKPVQLAPLLAAIERAEQ  124
             G  V++ L+   S +A++FLTGHG+VP+AVE +K GAVDFLQKPV + PL AA+ERA  
Sbjct  59   DGQGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALT  118

Query  125  ATLSAATRFAQLAAYQRLTPREHQLLQLIARGHKNQQIAQDLCISVRTVEVCRASLMKRL  184
             + +A +R   +  YQ+LTP+E++L  L+A+G  N++IA+ + I+VRTVEV RA +M ++
Sbjct  119  VSSAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKM  178

Query  185  EVDSLAELMLLYANVHSA  202
            + +SLAEL+  + ++ S+
Sbjct  179  QAGSLAELIRRFEKMASP  196

110) AHML_17585 in NC_021290


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  131 bits (482),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 86/198 (44%), Positives = 138/198 (70%), Gaps = 5/198 (2%)

Query  7    PPLYLVDDDEAVLDSLRFMLES--CDERQLFSFADGERFLTEVDLHQPACLILDCRMPGL  64
            + + L+DDD AV ++  F+LES   D +     ++G  FL++  L Q++ ++LD RMP L
Sbjct  2    ATIHLLDDDTAVTNACAFLLESLGYDVK---CWTQGADFLAQASLYQAGVVLLDMRMPVL  58

Query  65   SGPEVQQRLKAAQSPIAILFLTGHGEVPLAVESLKQGAVDFLQKPVQLAPLLAAIGRAEQ  124
             G  V++ L+   S +A++FLTGHG+VP+AVE +K+GAVDFLQKPV + PL AA+ RA  
Sbjct  59   DGQGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALT  118

Query  125  ATLSAATRFAQLAAYQRLTPREHQLLQLIARGHKNQQIAQDLCISVRTVEVCRASLMRRL  184
             + +A +R   +  YQ+LTP+E++L  L+A+G  N++IA+ + I+VRTVEV RA +M ++
Sbjct  119  VSSAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKM  178

Query  185  EVDSLAELMLLYANVHSA  202
            + +SLAEL+  + ++ S+
Sbjct  179  QAGSLAELIRRFEKMASP  196

111) N646_1088 in NC_022349


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  131 bits (482),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 79/192 (42%), Positives = 125/192 (66%), Gaps = 0/192 (0%)

Query  9    PVFVVDDDESVRDSLAFMLEEHDFNVTTFADGQSFLDKVNIHQAGCVILDSRMPNLRGQQ  68
             + ++DDD +V ++ AF+LE  +++V   ++G  FL + ++ QAG V+LD RMP L GQ 
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  69   VHQVLNKANSPLAVIYLTGHGDVPMAVDALHAGAVNFFQKPVKGDELARAILQGQAQSAT  128
            VH+ L +  S LAV++LTGHGDVPMAV+ +  GAV+F+QKPV    L  A+ ++ + S++
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  129  NLDMAAAKSAYESLTPREKDILRLIIEGKRNIRIADELCIAMRTVEVHRANLLKKFSAKT  188
             +        Y+ LTP+E+++  L+  G  N  IA+ + IA+RTVEVHRA ++ K  A +
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  189  VAELAYIYGKLD  200
            +AEL   + K+ 
Sbjct  183  LAELIRRFEKMA  194

112) VEA_003036 in NC_013456


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  130 bits (477),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 80/192 (42%), Positives = 125/192 (66%), Gaps = 0/192 (0%)

Query  9    PVYVVDDDESVRDSLAFMLEEHGFNVTTFADGQSFLDEVDVQQAGCIILDSRMPNLRGQQ  68
             + ++DDD +V ++ AF+LE  G++V   ++G  FL +  + QAG ++LD RMP L GQ 
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  69   VHQFLNEAHSPLAVIYLTGHGDVPMAVDALQAGAVNFFQKPVKGDELAQAILHGQMQSAA  128
            VH+ L +  S LAV++LTGHGDVPMAV+ ++ GAV+F+QKPV    L  A+ ++   S+A
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  129  SLDMVAARAAYESLTPREKDILRLIIAGKRNIRIADELCIAMRTVEVHRANLLKKFSAKT  188
            ++        Y+ LTP+E+++  L+  G  N  IA+ + IA+RTVEVHRA ++ K  A +
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  189  VAELAYIYGKLD  200
            +AEL   + K+ 
Sbjct  183  LAELIRRFEKMA  194

113) AZKH_1450 in NC_020516


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  130 bits (475),  Expect = 6e-32, Method: Compositional matrix adjust.
 Identities = 82/189 (44%), Positives = 130/189 (69%), Gaps = 4/189 (2%)

Query  13   IHIVDDDEALRDSLVWLLESSGHRVRAYESAEAFLADFNLAMTGCLVLDVRMPGMSGLEL  72
            IH++DDD A+ ++   LLES G  V+    +  FLA+ +L  +G ++LD+RMP + G  +
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGV  63

Query  73   FEELRRRHCSLPVIFITGHGDVPMAVSAVKKGAVDFIEKPFSERDMLDLIAECLAAEQAS  132
             + LR+   +L+V+F+TGHGDVPMAV  +K+GAVDF++KP S + +   +   L+   A+
Sbjct  64   HDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAA  123

Query  133  RGRRQLEAETVRRLTQLTQREREVLDLIIAGKLNKQIADVLGISIKTVEVHRARVMEKME  192
             +RR++    +    QLT +ERE+  L+  G +N++IA+ + I+++TVEVHRARVMEKM+
Sbjct  124  VARREI----ILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQ  179

Query  193  ANSLAELVQ  201
            A SLAEL++
Sbjct  180  AGSLAELIR  188

114) Nhal_1442 in NC_013960


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  128 bits (467),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 81/192 (43%), Positives = 136/192 (71%), Gaps = 6/192 (3%)

Query  5    NTIYIVDDDDAMRKSLALLLKGEGFNVKTYASAQAFLESEESPF-TGCILLDVRMPGMDG  63
             TI ++DDD A+ ++ A+LL + G++VK  + +  FL ++ S + +G +LLD+RMP +DG
Sbjct  2    ATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFL-AQASLYQAGVVLLDMRMPVLDG  60

Query  64   FELQELLPQRGIHLPVIMITGHADVPMAVQAMKSGAEDFIEKPFRAQALLDRIHKALSEG  123
              +++ L Q G  L+V+ +TGH+DVPMAV+ MK GA DF++KP   ++L   +++AL+ +
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  124  NHQGQFQDPQREFLTQLESLTKRERQVFELLAEGKMNKHIAAELSISIRTVEAHRAKVME  183
            +       ++RE++   + LT +ER++  L+A G MN++IA  ++I++RTVE HRA+VME
Sbjct  121  SAAV----ARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVME  176

Query  184  KLKAKSLADLIR  195
            K++A SLA+LIR
Sbjct  177  KMQAGSLAELIR  188

115) Sala_2460 in NC_008048


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  128 bits (467),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 77/189 (41%), Positives = 124/189 (66%), Gaps = 4/189 (2%)

Query  7    IHLVDDEEAIRKSAGFMLRTVGFEVRTYASGVEFLKLARTAETGCVLLDVRMPELDGLQV  66
            IHL+DD+ A+ ++ +F+L ++G++V+  + G +FL  A   ++G VLLD+RMP LDG  V
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGV  63

Query  67   QSEMAQRGINMPVVVLTGHGDVTLAVQAMKAGAVDFIEKPFEKASLLEAIDRGFARIDRV  126
            +  + Q G  ++VV LTGHGDV +AV+ MK GAVDF++KP    +L  A++R+++    V
Sbjct  64   HDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALT----V  119

Query  127  DVRATEEAEAQVRIGVLTPREKEVLDGLARGYPNKTIAYDLGVSSRTVEVHRASLMSKLA  186
               A    E  +    LTP+E+E+   +A+G+ N+ IA  + ++ RTVEVHRA +M K+ 
Sbjct  120  SSAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQ  179

Query  187  VRSLSDALR  195
              SL++ +R
Sbjct  180  AGSLAELIR  188

116) fixJ in NC_008358


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  127 bits (466),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 81/191 (43%), Positives = 129/191 (68%), Gaps = 8/191 (4%)

Query  7    IHLVDDDEAIRHSASFMLRHAGFRVKTYVDGVAFLEQAGEAEKGCILLDVQMPKMDGLQV  66
            IHL+DDD A+ ++ +F+L   G+ VK   +G  FL QA+  + G +LLD++MP +DG  V
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGV  63

Query  67   QEALNERGVAMPVIVLTGHGDVAVAVRAMKAGAVDFVEKPYAKQTLVDALTRAF--ERLE  124
            ++AL + G +++V+ LTGHGDV++AV  MK GAVDF++KP + + L  AL RA+      
Sbjct  64   HDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAA  123

Query  125  SRRKEDVLADEARGLIENLTAREKEVLHGLVDGQTNKEIAISLDISPRTVEIHRANVMEK  184
              R+E +L        ++LT++E+E+   +  G  N+EIA +++I+ RTVE+HRA VMEK
Sbjct  124  VARREIILC------YQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEK  177

Query  185  MGASNLSTVLR  195
            M A++L+ ++R
Sbjct  178  MQAGSLAELIR  188

117) Daro_3108 in NC_007298


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  126 bits (463),  Expect = 5e-31, Method: Compositional matrix adjust.
 Identities = 83/190 (44%), Positives = 126/190 (67%), Gaps = 4/190 (2%)

Query  7    TIFVVDDDEAMRDSMTWLLEGEGYRVACFDSAENFLKARRDDMRGCLVLDVRMPEMSGLE  66
            TI ++DDD A+ ++ + LLE+ GY V C   + +FL        G ++LD+RMP + G  
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  67   LQEKLDALGSQLPVIFVTGHGDVPMAVSALQRGACDFIEKPFHNEDLLSRIQRALELDNQ  126
            +++ L   GS L+V+F+TGHGDVPMAV  ++RGA DF++KP     L + ++RAL + + 
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  127  LSARRQRDGVISHRLDQLTQREREVMQLVVAGKLNKQIADELNISMKTVEAHRARVMEKM  186
              ARR+    I    +QLT +ERE+  LV  G +N++IA+ +NI+++TVE HRARVMEKM
Sbjct  123  AVARRE----IILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKM  178

Query  187  GVRTLAELVK  196
               +LAEL++
Sbjct  179  QAGSLAELIR  188

118) Sbal175_3653 in NC_017571


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  125 bits (456),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 85/193 (45%), Positives = 125/193 (65%), Gaps = 0/193 (0%)

Query  6    PVYLIDDDDSVRRSLRFMLESYGLKITDFDSAEAFFTAVDLTLPGCALVDVRMPGLSGPQ  65
             + L+DDD +V  +  F+LES G  +     +  F++   L  +G  L+D+RMP L G  
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  66   LHLELVAKNSPLAVIYLTGHGDVPMAVEALKLGAVDFFQKPADGaklaeavlkaleHTKA  125
            +H  L    S LAV++LTGHGDVPMAVE +K GAVDF+QKP     L  A+ +AL  + A
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  126  HHQDNQYLETYQALTPREREILNLIAQGLKNQEIADSLCIAMRTVEIHRANLMKGMQVGS  185
                 + +  YQ LTP+ERE+ +L+A+G+ N+EIA+++ IA+RTVE+HRA +M  MQ GS
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  186  LAEMMLIYSRIAD  198
            LAE++  + ++A 
Sbjct  183  LAELIRRFEKMAS  195

119) Sbal117_0695 in NC_017579


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  124 bits (455),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 85/193 (45%), Positives = 125/193 (65%), Gaps = 0/193 (0%)

Query  6    PVYLIDDDDSVRRSLRFMLESYGLKITDFDSAEAFFTAVDLTLPGCALVDVRMPGLSGPQ  65
             + L+DDD +V  +  F+LES G  +     +  F++   L  +G  L+D+RMP L G  
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  66   LHLELVAKNSPLAVIYLTGHGDVPMAVEALKLGAVDFFQKPADGaklaeavlkaleHTKA  125
            +H  L    S LAV++LTGHGDVPMAVE +K GAVDF+QKP     L  A+ +AL  + A
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  126  HHQDNQYLETYQALTPREREILNLIAQGLKNQEIADSLCIAMRTVEIHRANLMKGMQVGS  185
                 + +  YQ LTP+ERE+ +L+A+G+ N+EIA+++ IA+RTVE+HRA +M  MQ GS
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  186  LAEMMLIYSRIAE  198
            LAE++  + ++A 
Sbjct  183  LAELIRRFEKMAS  195

120) Sbal_0593 in NC_009052


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  124 bits (455),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 85/193 (45%), Positives = 125/193 (65%), Gaps = 0/193 (0%)

Query  6    PVYLIDDDDSVRRSLRFMLESYGLKITDFDSAEAFFTAVDLTLPGCALVDVRMPGLSGPQ  65
             + L+DDD +V  +  F+LES G  +     +  F++   L  +G  L+D+RMP L G  
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  66   LHLELVAKNSPLAVIYLTGHGDVPMAVEALKLGAVDFFQKPADGaklaeavlkaleHTKA  125
            +H  L    S LAV++LTGHGDVPMAVE +K GAVDF+QKP     L  A+ +AL  + A
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  126  HHQDNQYLETYQALTPREREILNLIAQGLKNQEIADSLCIAMRTVEIHRANLMKGMQVGS  185
                 + +  YQ LTP+ERE+ +L+A+G+ N+EIA+++ IA+RTVE+HRA +M  MQ GS
Sbjct  123  AVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGS  182

Query  186  LAEMMLIYSRIAE  198
            LAE++  + ++A 
Sbjct  183  LAELIRRFEKMAS  195

121) nodW in NC_011983


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  123 bits (451),  Expect = 5e-30, Method: Compositional matrix adjust.
 Identities = 79/191 (42%), Positives = 125/191 (66%), Gaps = 4/191 (2%)

Query  8    PTIYVIDDDPSVRDGLDSLLRSVGYDVSSFASPRDFLKHRRSDGPSCLVLDVRMPDASGL  67
            +TI ++DDD +V ++   LL S+GYDV   +   DFL +     ++ ++LD+RMP   G 
Sbjct  2    ATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQ  61

Query  68   DFQDELARTGNPLPIIFLTGHGDVPMSVRAMKAGAVEFLLKPFREQDLLDAIRQALEKDR  127
            + +D L + G+ L+++FLTGHGDVPM+V  MK GAV+FL KP      + +++ ALE+  
Sbjct  62   GVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVS----VKPLQAALERAL  117

Query  128  TRLRQDAATTDLRERFATLTAREREVMALVARGRLNKQIAAELGLSEITVKVHRGQAMRK  187
            T      A  ++   +  LT++ERE+ +LVA+G +N++IA  + ++  TV VHR++ M K
Sbjct  118  TVSSAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEK  177

Query  188  MQAGSVADLIR  198
            MQAGS+A+LIR
Sbjct  178  MQAGSLAELIR  188

122) VV2224 in NC_005139


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  123 bits (450),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 84/194 (44%), Positives = 125/194 (65%), Gaps = 6/194 (3%)

Query  7    PVYVVDDDESVRDSLAFMLEEYDFLVTTFADGQAFLDGVDTEQAGCVILDSRMPNLRGQQ  66
             + ++DDD +V ++ AF+LE  ++ V   ++G  FL      QAG V+LD RMP L GQ 
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  67   VHQILNETKSPLAVIYLTGHGDVPMAVDAMQAGAVNFFQKPVKGAELAQAIIQGQVQSAA  126
            VH+ L +  S LAV++LTGHGDVPMAV+ M+ GAV+F+QKPV    L  A+ ++   S+A
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  127  NL---EIALAKRAYQSLTSREKDILRLIIVGKRNIRIADELCIAMRTVEVHRANLLKKFD  183
             +   EI L    YQ LT++E+++  L+  G  N  IA+ + IA+RTVEVHRA ++ K +
Sbjct  123  AVARREIIL---CYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQ  179

Query  184  AKTVAELAYTYGKI  197
            A ++AEL   + K+
Sbjct  180  AGSLAELIRRFEKM  193

123) EBL_c08480 in NC_017910


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  119 bits (435),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 78/181 (44%), Positives = 120/181 (67%), Gaps = 5/181 (2%)

Query  21   FMLEGEGYQPLCFSGAEEFLLFMKQHPPLMANDGCLVLDWRMPEMSGQELQIILNQANSP  80
            F+LE+ GY+  C + + +FL     +++L  + G ++LD RMP + GQ ++  L Q  S 
Sbjct  19   FLLESLGYDVKCWTQGADFL----AQASLY-QAGVVLLDMRMPVLDGQGVHDALRQCGST  73

Query  81   LAVIFLTAHGDVPMAVESLKRGAVDFLQKPVDSTSLLQAIKLGQERSLSELLLRKQLQAY  140
            LAV+FLT+HGDVPMAVE +KRGAVDFLQKPV   +L  A+  +   S + +  R  +  Y
Sbjct  74   LAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAAVARREIILCY  133

Query  141  EKLTCRERDILRLLFTGKTNNQVAEQCHIAVRTVEVHRANIMQHLEVSSTAEMIRHYAAI  200
            ++LT +ER++  L+  G  N ++AE  +IAVRTVEVHRA +M+ ++ +S AE+IR++  +
Sbjct  134  QQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGSLAELIRRFEKM  193

Query  201  E  201
             
Sbjct  194  A  194

124) Rpdx1_4467 in NC_014834


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  119 bits (433),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 78/191 (41%), Positives = 123/191 (65%), Gaps = 5/191 (2%)

Query  4    GTVHVIDDDLAMRESIEFLLGSAGYEVRLYESAQAFLDEPEV-EFGCILSDVRMPGIDGL  62
            +T+H++DDD A+ ++  FLL S GY+V+    +  FL ++ + + G +L D+RMP +DG 
Sbjct  2    ATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQ  61

Query  63   DLLKRQKAAGSKLPVLIMTGHGDVPLAVEAMKLGASDFIEKPFDDDRLIGLIELALKQAQ  122
            ++    +  GS L+V+++TGHGDVP+AVE MK GA DF++KP     L    + AL +A 
Sbjct  62   GVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPL----QAALERAL  117

Query  123  EGARSEAVTQDIALRIQSLSPRERQVMDGLVAGMSNKVIAREFDISPRTIEVYRANVMTK  182
              + +    ++I L  Q L+P+ER++   +  G  N+ IA   +I+ RT+EV RA VM K
Sbjct  118  TVSSAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEK  177

Query  183  MQASSLSELVR  193
            MQA+SL+EL+R
Sbjct  178  MQAGSLAELIR  188

125) ebA125 in NC_006513


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  119 bits (436),  Expect = 7e-29, Method: Compositional matrix adjust.
 Identities = 82/194 (43%), Positives = 128/194 (66%), Gaps = 10/194 (5%)

Query  11   NIYIVDDDEALRDSLVWLLESSGYRAVAFESAEQFLAA---YQPAMTGCLVLDVRMPGMS  67
             I ++DDD A+ ++   LLES GY       + +FLA    YQ+++   ++LD+RMP + 
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGV---VLLDMRMPVLD  59

Query  68   GFELFDELRRQSSTLPVIFITGHGDVPMAVSAVKKGAVDFIEKPFGDRDMLGLIEGCLAA  127
            G  + D LR+ +STL+V+F+TGHGDVPMAV  +K+GAVDF++KP + + + + +E  L+ 
Sbjct  60   GQGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTV  119

Query  128  EQESRGKRRLEAETTRRLGSLTQREREVLDLIIAGKLNKQIADVLGISIKTVEVHRARVM  187
               + ++R    E       LT +ERE+  L+  G +N++IA+ + I+++TVEVHRARVM
Sbjct  120  SSAAVARR----EIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVM  175

Query  188  EKMGAHSLAKLVRH  201
            EKM A SLA L+R+
Sbjct  176  EKMQAGSLAELIRR  189

126) SLG_38420 in NC_015976


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  119 bits (436),  Expect = 8e-29, Method: Compositional matrix adjust.
 Identities = 76/189 (41%), Positives = 127/189 (68%), Gaps = 4/189 (2%)

Query  7    IHIVDDEESIRKSTGFLLRTSGYSVETWASGTAFIKEVRQAEHGCVLLDIRMPGMDGLEV  66
            IH++DD+ ++ ++ +FLL + GY V  W+ G+ F+ +    + G VLLD+RMP +DG  V
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGV  63

Query  67   QQALADMGVTMPVVIMTGHGDIPIAVRAMKAGAVDLLEKPFEKSALLRAIEEGFarmaaa  126
            ++AL + G T++VV++TGHGD+P+AV  MK GAVD+L+KP    +L  A+E +++  +AA
Sbjct  64   HDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAA  123

Query  127  dsasssardaEVRLAALTPREQDVLTGLAKGLPNKTIAYDLGISPRTVEVHRANLMVKLE  186
             +         +    LTP+E+++ + +AKG+ N+ IA  + I+ RTVEVHRA +M K++
Sbjct  124  VARREII----LCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQ  179

Query  187  VRSLSDALR  195
              SL++ +R
Sbjct  180  AGSLAELIR  188

127) Tmz1t_3866 in NC_011662


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  118 bits (430),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 79/195 (41%), Positives = 128/195 (66%), Gaps = 4/195 (2%)

Query  14   PTIFVIDDDEDVRTSLSRLLRAAGWQVETFASAGDFLERPACAGTACVLLDVDMPEMTGP  73
            +TI ++DDD  V  + + LL + G +V   + ++DFL +++   ++ VLLD+ MP + G 
Sbjct  2    ATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQ  61

Query  74   RLHETMLARGIDMPVIFLTGKGDVPTTVQAMKRGAVDFLLKPVENDTLFAAIEIALRRHD  133
             +H+++   G  ++V+FLTG GDVP +V+ MKRGAVDFL KPV    L AA+E AL    
Sbjct  62   GVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSS  121

Query  134  SDQARRREQLGIAMRLDRLSAREREVMELVVLGRLNKQIAAELGIAEKTVKIHRGRVMEK  193
            +  ARR     I +  ++L+++ERE+  LV  G +N++IA  + IA +TV +HR+RVMEK
Sbjct  122  AAVARR----EIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEK  177

Query  194  MEVQSVAALVHLLDR  208
            M+  S+A L++ +++
Sbjct  178  MQAGSLAELIRRFEK  192

128) Alvin_0640 in NC_013851


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  118 bits (429),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 80/191 (42%), Positives = 128/191 (68%), Gaps = 4/191 (2%)

Query  7    AIVFIVDDDQAMRTSLQWLIESTGMSVKTYDSADAFLADYYPGRAGCLLLDVRMPGMSGL  66
            A + ++DDD A+  +   L+ES G  VK    +  FLA+    +AG +LLD+RMP + G 
Sbjct  2    ATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQ  61

Query  67   ELQAYLAREGFRIPVILITGHGDVAMAVRAMKAGAMDFIEKPFHDEDLLRSLRNALDHDQ  126
             ++  L + G  ++V+++TGHGDV+MAV  MK GA+DF++KP      +++L+ AL++  
Sbjct  62   GVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVS----VKPLQAALERAL  117

Query  127  KTRANRLARADIAMRLAELTPREHEVMAMVTDGKSNKEIAAALGVSAKTVEAHRARVMEK  186
               +  +AR +I +   +LTP+E+E+ ++V+ G  N+EIA A+ ++ +TVE HRARVMEK
Sbjct  118  TVSSAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEK  177

Query  187  MRAESLAELVR  197
            M+A SLAEL+R
Sbjct  178  MQAGSLAELIR  188

129) uhpA in NC_014006


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  117 bits (426),  Expect = 4e-28, Method: Compositional matrix adjust.
 Identities = 78/189 (42%), Positives = 122/189 (65%), Gaps = 4/189 (2%)

Query  7    IHLVDDEESIRKAASFALKTAGYDVVTYASGVEFLKEAKSAAVGCVILDVRMPEMDGLEV  66
            IHL+DD+ ++ +A +F L + GYDV   + G +FL +A     G V+LD+RMP +DG  V
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGV  63

Query  67   QAAMAARGVNMPVIVLTGHGDVSVAVQAMKGGAVDFLEKPFEKAALLGAVSRAFARLDDV  126
            + A+   G  ++V+ LTGHGDV++AV+ MK GAVDFL+KP    +L +A+ RA++    V
Sbjct  64   HDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALT----V  119

Query  127  DLRTLETSEAGVRVAALTPREREVLERLANGLPNKTIAYDLGCSSRTVEVHRASLMAKLE  186
               ++   E  +    LTP+ERE+   +A+G+ N+ IA  +  + RTVEVHRA +M K++
Sbjct  120  SSAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQ  179

Query  187  VRNLSEALR  195
              +L+E +R
Sbjct  180  AGSLAELIR  188

130) Sphch_4188 in NC_015595


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  117 bits (426),  Expect = 5e-28, Method: Compositional matrix adjust.
 Identities = 78/189 (42%), Positives = 122/189 (65%), Gaps = 4/189 (2%)

Query  7    IHLVDDEESIRKAASFALKTAGYDVVTYASGVEFLKEAKSAAVGCVILDVRMPEMDGLEV  66
            IHL+DD+ ++ +A +F L + GYDV   + G +FL +A     G V+LD+RMP +DG  V
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGV  63

Query  67   QAAMAARGVNMPVIVLTGHGDVSVAVQAMKGGAVDFLEKPFEKAALLGAVSRAFARLDDV  126
            + A+   G  ++V+ LTGHGDV++AV+ MK GAVDFL+KP    +L +A+ RA++    V
Sbjct  64   HDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALT----V  119

Query  127  DFRTLETSEAGVRVAALTPREREVLEGLANGLPNKTIAYDLGCSSRTVEVHRASLMAKLE  186
               ++   E  +    LTP+ERE+   +A+G+ N+ IA  +  + RTVEVHRA +M K++
Sbjct  120  SSAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQ  179

Query  187  VRNLSEALR  195
              +L+E +R
Sbjct  180  AGSLAELIR  188

131) SLG_p_00780 in NC_015974


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  117 bits (426),  Expect = 5e-28, Method: Compositional matrix adjust.
 Identities = 78/189 (42%), Positives = 122/189 (65%), Gaps = 4/189 (2%)

Query  7    IHLVDDEESIRKAASFALKTAGYDVVTYASGVEFLKEAKSAAVGCVILDVRMPEMDGLEV  66
            IHL+DD+ ++ +A +F L + GYDV   + G +FL +A     G V+LD+RMP +DG  V
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGV  63

Query  67   QAAMAARGVNMPVIVLTGHGDVSVAVQAMKGGAVDFLEKPFEKAALLGAVSRAFARLDDV  126
            + A+   G  ++V+ LTGHGDV++AV+ MK GAVDFL+KP    +L +A+ RA++    V
Sbjct  64   HDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALT----V  119

Query  127  DFRTLETSEAGVRVAALTPREREVLEGLANGLPNKTIAYDLGCSSRTVEVHRASLMAKLE  186
               ++   E  +    LTP+ERE+   +A+G+ N+ IA  +  + RTVEVHRA +M K++
Sbjct  120  SSAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQ  179

Query  187  VRNLSEALR  195
              +L+E +R
Sbjct  180  AGSLAELIR  188

132) G432_19515 in NC_020542


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  116 bits (425),  Expect = 6e-28, Method: Compositional matrix adjust.
 Identities = 77/189 (41%), Positives = 122/189 (65%), Gaps = 4/189 (2%)

Query  7    IHLVDDEESIRKAASFALKTAGYDVVTYASGVEFLKEAKSAAVGCVILDVRMPEMDGLEI  66
            IHL+DD+ ++ +A +F L + GYDV   + G +FL +A     G V+LD+RMP +DG  +
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGV  63

Query  67   QAAMAARGVNMPVIVLTGHGDVSVAVQAMKGGAVDFLEKPFEKAALLGAVSRAFARLDDV  126
            + A+   G  ++V+ LTGHGDV++AV+ MK GAVDFL+KP    +L +A+ RA++    V
Sbjct  64   HDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALT----V  119

Query  127  DLRTLETSEAGVRVAALTPREREVLEGLANGLPNKTIAYDLGCSSRTVEVHRASLMAKLE  186
               ++   E  +    LTP+ERE+   +A+G+ N+ IA  +  + RTVEVHRA +M K++
Sbjct  120  SSAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQ  179

Query  187  VRNLSEALR  195
              +L+E +R
Sbjct  180  AGSLAELIR  188

133) nodW in NC_021591


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  116 bits (424),  Expect = 7e-28, Method: Compositional matrix adjust.
 Identities = 75/187 (41%), Positives = 119/187 (64%), Gaps = 10/187 (5%)

Query  21   LLNSAGYNAVDFDCAEAFLTHAFPAIPGCIILDMRMPSGDGFAVTDALKASGREMPVIFL  80
            LL+S GY+      +  FL++A    +G ++LDMRMP  DG +V DAL+  G  ++V+FL
Sbjct  20   LLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGVHDALRQCGSTLAVVFL  79

Query  81   TGYGTIPLSVQAMKAGAHEFLTKPVASDDLLKAVQEALNLAAENSDQLRE---HYELKQR  137
            TG G +P++V+ MK GA +FL KPV+   L  A++ AL +++    + RE    Y+    
Sbjct  80   TGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAAVAR-REIILCYQ----  134

Query  138  HLTLTPREQEVLELTIKGLMNKQIAAELGVSEITVKVHRRRVMDKMQVRSLADLVRHAER  197
               LTP+E+E+  L  KG+MN++IA  + ++  TV VHR RVM+KMQ  SLA+L+R+ E+
Sbjct  135  --QLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGSLAELIRRFEK  192

Query  198  LNLSKSK  204
            +  + ++
Sbjct  193  MASPETR  199

134) BRPE64_DCDS06140 in NC_021289


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  116 bits (422),  Expect = 9e-28, Method: Compositional matrix adjust.
 Identities = 81/196 (42%), Positives = 135/196 (69%), Gaps = 5/196 (2%)

Query  6    PIVFVVDDDESVRRALTRLIRSAGYRVEGYASARAFLDRPSSMDAEACLVLDVQLPDLNG  65
            + + ++DDD +V  A + L+ S GY V   + +  FL ++S  +A   ++LD+++P L+G
Sbjct  2    ATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGV-VLLDMRMPVLDG  60

Query  66   LALQRQLNATGVTLPIIFVTAHGDIAMTVNAMKAGAMDFLTKPVGEADLFVAIEAALLHA  125
             +++  L   G TL+++F+T+HGD++M+V+ MK GA+DFL KPV+   L  A+E AL  +
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  126  SEVRAHRVEADIILNRLSRLTPREREVLSLLAEGRVNKQVACELGTAVKTIKVHRGRVLE  185
            S   A+R   +IIL    +LTP+ERE+ SL+A G +N+++A  +  AV+T+ VHR+RV+E
Sbjct  121  SAAVARR---EIILC-YQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVME  176

Query  186  KMETHSLAELVRILNK  201
            KM++ SLAEL+R ++K
Sbjct  177  KMQAGSLAELIRRFEK  192

135) M621_15445 in NC_021659


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  115 bits (421),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 75/187 (41%), Positives = 118/187 (64%), Gaps = 10/187 (5%)

Query  21   LLNSAGYSAVDFDCAEAFLSHAFPAIPGCIILDMRMPSGDGFAVTDALKASGREMPVIFL  80
            LL+S GY       +  FL++A    +G ++LDMRMP  DG +V DAL+  G  ++V+FL
Sbjct  20   LLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGVHDALRQCGSTLAVVFL  79

Query  81   TGYGTIPLSVQAMKAGAHEFLTKPVASDDLLKAVQEALNLAAENSDQLRE---HYELKQR  137
            TG G +P++V+ MK GA +FL KPV+   L  A++ AL +++    + RE    Y+    
Sbjct  80   TGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAAVAR-REIILCYQ----  134

Query  138  HLTLTPREQEVLELTIKGLMNKQIAAELGVSEITVKVHRRRVMDKMQVRSLADLVRHAER  197
               LTP+E+E+  L  KG+MN++IA  + ++  TV VHR RVM+KMQ  SLA+L+R+ E+
Sbjct  135  --QLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGSLAELIRRFEK  192

Query  198  LNLSKSK  204
            +  + ++
Sbjct  193  MASPETR  199

136) Tmz1t_3192 in NC_011662


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  114 bits (417),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 85/197 (44%), Positives = 125/197 (64%), Gaps = 18/197 (9%)

Query  12   VHVVDDDEALRDSLAWMLEANGHAVAVHESGEAFLAACTPEMTGCVLLDVRMPGMSGLEV  71
            +H++DDD A+ ++ A +LE+ G  V     G  FLA  +   +G VLLD+RMP + G  V
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGV  63

Query  72   FEELGRRRCG--LPVVFITGHGDVPMAVSALKQGAVDFVEKPFGEREMLRVVEQClrler  129
             + L  R+CG  L+VVF+TGHGDVPMAV  +K+GAVDF++KP + + +   +E+      
Sbjct  64   HDAL--RQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALER------  115

Query  130  etrdrrlqeADTARR-----LGLLTQREREVLELIIVGKLNKQIADVLGISIKTVEVHRA  184
                  +  A  ARR        LT +ERE+  L+  G +N++IA+ + I+++TVEVHRA
Sbjct  116  ---ALTVSSAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRA  172

Query  185  RVMEKMGAHSLAELVQH  201
            RVMEKM A SLAEL+++
Sbjct  173  RVMEKMQAGSLAELIRR  189

137) fixJ in NC_005296


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  114 bits (417),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 78/191 (41%), Positives = 120/191 (63%), Gaps = 5/191 (2%)

Query  4    GTVHVIDDDLAMRESIEFLLSSAGYEVKLYESAQTFLDLPDV-EFGCILSDVRMPGIDGL  62
            +T+H++DDD A+ ++  FLL S GY+VK    +  FL  + + + G +L D+RMP +DG 
Sbjct  2    ATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQ  61

Query  63   DLLKRQKAAGSKLPVLIMTGHGDVPLAVEAMKLGASDFIEKPFDDDRLIGLIELALKQAQ  122
            ++    +  GS L+V+++TGHGDVP+AVE MK GA DF++KP     L    + AL +A 
Sbjct  62   GVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPL----QAALERAL  117

Query  123  EGAKSEAVTQDIATRIQSLSPRERQVMDGLIAGMSNKVIAREFDISPRTIEVYRANVMTK  182
              + +    ++I    Q L+P+ER++   +  G  N+ IA   +I+ RT+EV RA VM K
Sbjct  118  TVSSAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEK  177

Query  183  MQATSLSELVR  193
            MQA SL+EL+R
Sbjct  178  MQAGSLAELIR  188

138) fixJ in NC_011004


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  114 bits (417),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 78/191 (41%), Positives = 120/191 (63%), Gaps = 5/191 (2%)

Query  4    GTVHVIDDDLAMRESIEFLLSSAGYEVKLYESAQTFLDLPDV-EFGCILSDVRMPGIDGL  62
            +T+H++DDD A+ ++  FLL S GY+VK    +  FL  + + + G +L D+RMP +DG 
Sbjct  2    ATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQ  61

Query  63   DLLKRQKAAGSKLPVLIMTGHGDVPLAVEAMKLGASDFIEKPFDDDRLIGLIELALKQAQ  122
            ++    +  GS L+V+++TGHGDVP+AVE MK GA DF++KP     L    + AL +A 
Sbjct  62   GVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPL----QAALERAL  117

Query  123  EGAKSEAVTQDIATRIQSLSPRERQVMDGLIAGMSNKVIAREFDISPRTIEVYRANVMTK  182
              + +    ++I    Q L+P+ER++   +  G  N+ IA   +I+ RT+EV RA VM K
Sbjct  118  TVSSAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEK  177

Query  183  MQATSLSELVR  193
            MQA SL+EL+R
Sbjct  178  MQAGSLAELIR  188

139) BN69_2706 in NC_018485


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  112 bits (407),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 82/193 (43%), Positives = 125/193 (65%), Gaps = 4/193 (2%)

Query  4    GTVFIVDDDAAVRDALQLLLESEGFAVSSFPSAPAMLSSIGPESAGCVIADVRMPEVSGL  63
            +T+ ++DDD+AV +A  +LLES G+ V     ++  L+  +   AG V+ D+RMP + G 
Sbjct  2    ATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQ  61

Query  64   DLILEMKNRNLHLPIIIITGHGDVPLAVEAMKRGAVDFLEKPFDDDALFAAVKGALSKHE  123
            ++   +++    L+++++TGHGDVP+AVE MKRGAVDFL+KP    +L AA+  AL+   
Sbjct  62   GVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSS  121

Query  124  AVQSRCAEERQISERLMSLTKREREILERLAQGRSNKVIAHDLGISVRTVEAHRANVMAK  183
            A  +R    R+I      LT +ERE+   +A+G  N+ IA+ + I+VRTVE HRA VM K
Sbjct  122  AAVAR----REIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEK  177

Query  184  MRVKNLAELVRIF  196
            M+  +LAEL+R F
Sbjct  178  MQAGSLAELIRRF  190

140) fixJ in NC_008435


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  112 bits (408),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 77/191 (41%), Positives = 124/191 (65%), Gaps = 4/191 (2%)

Query  5    GSVYVIDDDQAMRDSLEFLLGSADFEVRLFESAIDFLHDMSGLPFGCVVSDVRMPGMNGM  64
            +++ ++DDD A+ ++  FLL S +++V+    + DFL + S    G V+ D+RMP ++G 
Sbjct  2    ATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQ  61

Query  65   DLLKQLKNDRARLPVVIMTGHGDVPLAVEAMKLGAIDFIEKPFEDDRLIDMIETALMQAS  124
            ++   L++  + L+VV++TGHGDVP+AVE MK GA+DF++KP     L   +E AL  +S
Sbjct  62   GVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSS  121

Query  125  AGVKTEAIAQDIAARIATLSPRERQVMDGLVAGLSNKVIAREFDISPRTIEVYRANVMTK  184
            A+V      ++I      L+P+ER++   +  G+ N+ IA   +I+ RT+EV RA VM K
Sbjct  122  AAVAR----REIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEK  177

Query  185  MQAGSLSELVR  195
            MQAGSL+EL+R
Sbjct  178  MQAGSLAELIR  188

141) fixJ in NC_012808


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  111 bits (404),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 78/192 (41%), Positives = 125/192 (66%), Gaps = 6/192 (3%)

Query  5    GTVHVIDDDMAVRQSLAFLLQTVGIPVRVYDSAVAFLNALPAVQRGCVVTDIRMPEIHGL  64
            +T+H++DDD AV ++ AFLL+++G  V+    +  FL   +  Q G V+ D+RMP ++G 
Sbjct  2    ATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQ  61

Query  65   ELQRRLKPLDLSLPIIVITGHGDVPLAVEAMKAGAVDFIEKPFDDEVVLSAVRSALDLHA  124
             ++  L+  + +L+++ +TGHGDVP+AVE MK GAVDF++KP     + +A+  AL + +
Sbjct  62   GVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSS  121

Query  125  RESERKAQTTETVVRLGSLSERESQVLAGLVA-GHPNKVIARELGISPRTVEIYRANVMT  183
                R+    E ++    L+ +E + LA+LVA G  N+ IA  + I+ RTVE+ RA VM 
Sbjct  122  AAVARR----EIILCYQQLTPKERE-LASLVAKGFMNREIAEAMNIAVRTVEVHRARVME  176

Query  184  KMQASSLSELVR  195
            KMQA+SL+EL+R
Sbjct  177  KMQAGSLAELIR  188

142) Daro_2491 in NC_007298


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  111 bits (403),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 80/194 (42%), Positives = 126/194 (65%), Gaps = 6/194 (3%)

Query  7    LPVIHVVDDEAPFRRSLLFLLESVGWQAVGHDSAEAFLLAAPEMQAGGGCLVLDIRMPRI  66
            ++ IH++DD+++   +  FLLES+G +      +  FL  A+  QAG   ++LD+RMP +
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGV--VLLDMRMPVL  58

Query  67   SGLELQRRLRAADSPFPIVFMTGHGEVELAVQAMKNGAVDFLQKPFKDQIFLDTVERAVQ  126
             G  ++  LR  +S +++VF+TGHG+V +AV+ MK GAVDFLQKP   + +  ++ERA  
Sbjct  59   DGQGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERA--  116

Query  127  LSLERHAANRRHQEAREVLDRLSVREREVARLLALGLANKEVARQLGISDNTVHVHRQHV  186
            L++   A  RR  E     ++L+ +ERE+A L+A G+ N+E+A  + I+  TV+VHR +V
Sbjct  117  LTVSSAAVARR--EIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARV  174

Query  187  MEKTSTGSAAELAR  200
            MEK  +GS AEL R
Sbjct  175  MEKMQAGSLAELIR  188

143) Daro_0686 in NC_007298


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  110 bits (401),  Expect = 4e-26, Method: Compositional matrix adjust.
 Identities = 79/190 (42%), Positives = 125/190 (66%), Gaps = 4/190 (2%)

Query  8    TVFIVDDDASVRDALALLFSVRGYRTAIFSGAPDFLKAWQADWTGCLLIDIRMPVMDGLS  67
            T+ ++DDD++V +A A+L+   GY     + ++DFL       +G +L+D+RMPV+DG +
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  68   LQERLIEMGCTLPVVVITGHGDVESARRAFKSNAIDFLEKPIDHDKMLEAIEQAFNSQSL  127
            +++ L + G TL+VV +TGHGDV  A    K  A+DFL+KP+    +  A+E+A+   S 
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  128  MQDRKSASEKANYLLGQLTPREQEVMNLVVGGYHNREIAEKLGISVRTVEVHKAHVMSKL  187
               R+       Y   QLTP+E+E+ +LV  G+ NREIAE + I+VRTVEVH+A+VM K+
Sbjct  123  AVARREII--LCY--QQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKM  178

Query  188  DVDSVADLVR  197
            + +S+A+L+R
Sbjct  179  QAGSLAELIR  188

144) fixJ in NC_009937


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  110 bits (400),  Expect = 5e-26, Method: Compositional matrix adjust.
 Identities = 81/191 (43%), Positives = 120/191 (63%), Gaps = 6/191 (3%)

Query  6    PVHVIDDDDAVRESLAFLLESSGLAVTQHTSAAAFLDAGVPLDRGCIVTDVRMPGISGLE  65
             +H++DDD AV ++ AFLLES G  V   T +A FL  +   + G ++ D+RMP + G  
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  66   LLKELNARGAHMAVIVMTGHGDVPLAVEAMKLGAADFLEKPFDDAAIIAAVRASLGRSAE  125
            +   L   G+ +AV+ +TGHGDVP+AVE MK GA DFL+KP      + +++A+L R+  
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKP----VSVKPLQAALERALT  118

Query  126  QGRQEDARSEVGKRIAGLSQRERQVLECLV-NGLANKTIAYDLGISPRTVEVYRANVMTK  184
             +    AR E+      L+ +ER+ L  LV +G+ N+ IA  + I+ RTVEV RA VM K
Sbjct  119  VSSAAVARREIILCYQQLTPKERE-LASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEK  177

Query  185  MKAASLPELVR  195
            M+A+SL+EL+R
Sbjct  178  MQAGSLAELIR  188

145) HP15_1053 in NC_017506


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  110 bits (400),  Expect = 5e-26, Method: Compositional matrix adjust.
 Identities = 80/190 (43%), Positives = 125/190 (66%), Gaps = 4/190 (2%)

Query  7    TVYVVEDDEAVRDSLELLLKSDGKPVKTYESATAFLKDYSDKMAGCIVLDIRMPGMDGME  66
            T+ +++DD AV ++  +LL S G  VK    ++ FL + S   AG ++LD+RMP +DG  
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  67   LQKKLNEKHSILPIIFVTGHGDVPMAVDAMKEGAVDFIQKPYReeallekieaalkQDLE  126
            ++  L +  S L+++F+TGHGDVPMAV+ MK GAVDF+QKP      +  ++AAL + L 
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKP----VSVKPLQAALERALT  118

Query  127  QRKSLDEKQEIIRRIKSLTPREHEIMDRMIAGQANKVIAIELEISQRTVEIHRSRVMHKM  186
               +   ++EII   + LTP+E+E+   +  G  N+ IA  ++I+ RTVE+HR+RVM+KM
Sbjct  119  VSSAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKM  178

Query  187  GTHSLAHLVR  196
             + SLA+L+R
Sbjct  179  QAGSLAELIR  188

146) Dsui_1581 in NC_016616


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  110 bits (400),  Expect = 5e-26, Method: Compositional matrix adjust.
 Identities = 77/189 (41%), Positives = 122/189 (65%), Gaps = 4/189 (2%)

Query  18   VYVVDDDEAMRDSMVWLIESEGYPVRAFPSAEDFLAAYTDGLAGCLVLDVRMPGMSGLEL  77
            + ++DDD A+ ++   L+ES GY V+    + DFLA  +   AG ++LD+RMP + G  +
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGV  63

Query  78   YERLAAQRSTLPVIFITGHGDVPMAVAALKKGAADFIEKPFNDTDMLRLIRQCMDLDTER  137
             + L    STL+V+F+TGHGDVPMAV  +K+GA DF++KP +   +   + + + + +  
Sbjct  64   HDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAA  123

Query  138  RARRARENSVASRLAQLTAREREVMDRVVEGKLNKQIADELSISMKTVEAHRARVMEKMG  197
             ARR     +     QLT++ERE+   V  G +N++IA+ ++I+++TVE HRARVMEKM 
Sbjct  124  VARRE----IILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQ  179

Query  198  VRSLAELVQ  206
              SLAEL++
Sbjct  180  AGSLAELIR  188

147) fixJ in NC_012808


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  110 bits (399),  Expect = 6e-26, Method: Compositional matrix adjust.
 Identities = 80/191 (42%), Positives = 130/191 (69%), Gaps = 6/191 (3%)

Query  6    VHVVDDDPAMRDSVGFLLDTAGFEVALYRGGTNLLATLPRPARGAVLTDIRMPGIDGLEl  65
            +H++DDD A+ ++ +FLL++ G++V     G+++LA  +    G VL D+RMP +DG  +
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGV  63

Query  66   lrrlrAGGHTLPVVVMTGHGDVPLAVEAMKLGACDFIEKPFNDEALLQALRSALDRAGPA  125
               LR  G TL+VV +TGHGDVP+AVE MK GA DF++KP +    +++L++AL+RA   
Sbjct  64   HDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVS----VKPLQAALERALTV  119

Query  126  EAADPSLQEFIRRVGTLSHRERQVLDQLVAGG-TSKEIGRALDLSPRTVEIYRAKLMAKT  184
             +A  + +E+I     L+ +ER+ L  LVA G  ++EI+ A++++ RTVE+ RA++M K 
Sbjct  120  SSAAVARREIILCYQQLTPKERE-LASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKM  178

Query  185  QATGLQELVRW  195
            QA +L EL+R+
Sbjct  179  QAGSLAELIRR  189

148) fixJ in NC_012988


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  110 bits (399),  Expect = 6e-26, Method: Compositional matrix adjust.
 Identities = 80/191 (42%), Positives = 130/191 (69%), Gaps = 6/191 (3%)

Query  6    VHVVDDDPAMRDSVGFLLDTAGFEVALYRGGTNLLATLPRPARGAVLTDIRMPGIDGLEl  65
            +H++DDD A+ ++ +FLL++ G++V     G+++LA  +    G VL D+RMP +DG  +
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGV  63

Query  66   lrrlrAGGHTLPVVVMTGHGDVPLAVEAMKLGACDFIEKPFNDEALLQALRSALDRAGPA  125
               LR  G TL+VV +TGHGDVP+AVE MK GA DF++KP +    +++L++AL+RA   
Sbjct  64   HDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVS----VKPLQAALERALTV  119

Query  126  EAADPSLQEFIRRVGTLSHRERQVLDQLVAGG-TSKEIGRALDLSPRTVEIYRAKLMAKT  184
             +A  + +E+I     L+ +ER+ L  LVA G  ++EI+ A++++ RTVE+ RA++M K 
Sbjct  120  SSAAVARREIILCYQQLTPKERE-LASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKM  178

Query  185  QATGLQELVRW  195
            QA +L EL+R+
Sbjct  179  QAGSLAELIRR  189

149) Shew_1969 in NC_009092


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  109 bits (395),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 69/171 (41%), Positives = 115/171 (68%), Gaps = 4/171 (2%)

Query  20   MLEGMGYAPQTFTNASCFLTQVDLHLPGVAILDIQMPGVDGIELLQQIKQQDSPLSVIML  79
            +LE++GY  +  T+++ FL+Q  L  +GV +LD++MP +DG  + + ++Q +S L+V+ L
Sbjct  20   LLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGVHDALRQCGSTLAVVFL  79

Query  80   TGHGTISMAVQALQHGAIDFLEKPADGDKLQALMKKASLMSLDAYQHKEKASSVAQRIAS  139
            TGHG ++MAV+ +++GA+DFL+KP     LQA + +A  +S  A  ++E      Q    
Sbjct  80   TGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAAVARREIILCYQQ----  135

Query  140  LTPREQQVMHAVLAGKLNKVIAAELNIAQRTIELHRQKVMQKMQVNNVAEL  190
            LTP+E+++   V  G +N+ IA  +NIA RT+E+HR +VM+KMQ  ++AEL
Sbjct  136  LTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGSLAEL  186

150) Mrad2831_0400 in NC_010505


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  108 bits (394),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 80/191 (42%), Positives = 130/191 (69%), Gaps = 6/191 (3%)

Query  6    VHVVDDDPAMRDSVGFLLGTEGFDVRLYEAGADLLDGLKEPAGGCVLTDIRMPGIDGlel  65
            +H++DDD A+ ++ +FLL + G+DV+    GAD+L       +G VL D+RMP +DG  +
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGV  63

Query  66   lrrlraaghalPVVMMTGHGDVPLAVEAMKLGACDFIEKPFDDEALIQALRSALERGGAA  125
               LR  G +L+VV +TGHGDVP+AVE MK GA DF++KP      +++L++ALER+ + 
Sbjct  64   HDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVS----VKPLQAALERALTV  119

Query  126  GAVDPTLREFVRRFGTLSERERQVLNHLVAGG-TSKEIGRTLDISPRTVEIYRAKLMAKT  184
            ++   + RE++  +  L+ +ER+ L  LVA G  ++EI+ +++I+ RTVE+ RA++M K 
Sbjct  120  SSAAVARREIILCYQQLTPKERE-LASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKM  178

Query  185  RAESLQELVRW  195
            +A SL EL+R+
Sbjct  179  QAGSLAELIRR  189

151) fixJ in NC_018000


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  108 bits (393),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 77/189 (41%), Positives = 119/189 (63%), Gaps = 4/189 (2%)

Query  12   VHIVDDEEAVRKSLAFMLTMNGFAVKMHQSAEAFLAFAPNVRNGILVTDLRMPDMSGVEL  71
            +H++DD+ AV ++ AF+L   G+ VK    +  FLA A+  + G+++ D+RMP + G  +
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGV  63

Query  72   LRSLGTQKIKIPSIVITGHGDVPMAVEAMKAGAIDFIEKPFEDSVIVEAIERASEHLVVP  131
              +L      ++ + +TGHGDVPMAVE MK GA+DF++KP     +  A+ERA   L V+
Sbjct  64   HDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERA---LTVS  120

Query  132  EADAEEIVDIQARLQTLSERERQVLSAVVAGLPNKSIAYDLDISPRTVEVHRANVMAKMK  191
             A      +I    Q L+ +ER++ S V  G+ N+ IA  ++I+ RTVEVHRA VM KM+
Sbjct  121  SAAVARR-EIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQ  179

Query  192  AKSLPHLVR  200
            A SL++L+R
Sbjct  180  AGSLAELIR  188

152) Thimo_2324 in NC_019940


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  108 bits (391),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 78/193 (41%), Positives = 126/193 (66%), Gaps = 8/193 (4%)

Query  5    PIVFVVDDDEAMRTSLKWLIESVGLRVHTFGSAEEFLA--AYYPGRAGCLLVDVRMPGMS  62
            + + ++DDD A+  +   L+ES+G  V     + +FLA  + Y  +AG +L+D+RMP + 
Sbjct  2    ATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLY--QAGVVLLDMRMPVLD  59

Query  63   GLELQARLAKSELCLPVIIITGHGDVAMAVRAMKAGALDFIEKPFNDEALIGAIRRGLdr  122
            G  ++  L +    L+V+++TGHGDV+MAV  MK GA+DF++KP +  +L +A+ R+L  
Sbjct  60   GQGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERAL--  117

Query  123  dasqrrqqsrradITARLAQLTPREHEVMELVTDGKSNKEIAAALGVSAKTVEAHRARVM  182
              +       R +I     QLTP+E+E+  LV+ G  N+EIA A+ ++ +TVE HRARVM
Sbjct  118  --TVSSAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVM  175

Query  183  DKMEADSLADLVR  195
            +KM+A+SLA+L+R
Sbjct  176  EKMQAGSLAELIR  188

153) AZOLI_p20317 in NC_016586


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  107 bits (390),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 74/166 (45%), Positives = 111/166 (67%), Gaps = 4/166 (2%)

Query  31   SVRCCASAAEFLDAASPDQPGCAILDIRMPGMDGLDLQQEMVRRGLTLPVIIITGHGDVT  90
             V+C + +A+FL  AS  Q+G  +LD+RMP +DG ++++ + + G TL+V+++TGHGDV 
Sbjct  27   DVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGVHDALRQCGSTLAVVFLTGHGDVP  86

Query  91   AAVRAFRAGAVDFLQKPFDEDLLIERVQEAFERDLAARRADVEAGEIRRRLALLSPRELE  150
             AV   + GAVDFLQKP      +  +Q A+ER L+   A V   EI      L+P+E E
Sbjct  87   MAVEQMKRGAVDFLQKPVS----VKPLQAALERALTVSSAAVARREIILCYQQLTPKERE  142

Query  151  VMQLVAEGLPNKTIAQRLSIGIRTVETHRARVLEKMEARNAPELAR  196
            +  LVA G+ N+ IA+ ++I++RTVE HRARV+EKM+A + +EL R
Sbjct  143  LASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGSLAELIR  188

154) BJ6T_34030 in NC_017249


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  107 bits (389),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 80/196 (41%), Positives = 123/196 (63%), Gaps = 5/196 (2%)

Query  5    VHVVDDDDSFRTAIARRLKLAGYDVATYASaqdlldaapddaqpGCILLDVWIPGLSGPD  64
            +H++DDD +   A A  L   GYDV    +    + A +   Q+G +LLD+++P L G +
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCW-TQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  65   LQTRLVASGSTLPIIFLTGHADTPTTVQAIKAGAEDFLTKPVSSEQLIAAIERALVRQRA  124
            ++  L   GSTL+++FLTGH+D P +V+ +K GA DFL KPVS   L AA+ERAL    A
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  125  AQAHRGRLETFRIHLATLTHRERQVFDLIVRGRINKQIAHELGTTERTVKAHRHQVMEKM  184
            A A+R  +  ++     LT +ER++  L+ +G +N++IA+ +  + RTV  HR +VMEKM
Sbjct  123  AVARREIILCYQ----QLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKM  178

Query  185  QVHSLAELVSIAERLG  200
            Q  SLAEL+   E+++
Sbjct  179  QAGSLAELIRRFEKMA  194

155) LHK_00204 in NC_012559


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  105 bits (382),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 79/193 (41%), Positives = 122/193 (64%), Gaps = 5/193 (2%)

Query  10   LPVAHIVDDDEPFRQSLTFLLESSGWSTVEYDSAAAFLAADPPYPGAGCLILDIRMPRMN  69
            ++  H++DDD +  ++ +FLLES G        +A FLA  + Y  AG ++LD+RMP ++
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQ-AGVVLLDMRMPVLD  59

Query  70   GLELYQELVRRGSTFPVLFMTGHGDVELAVEAMKAGATDFLQKPFREQQLLTALESAHRH  129
            G  + + L + GST++V+F+TGHGDV +AVE MK GA DFLQKP   + L +ALE A   
Sbjct  60   GQGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTV  119

Query  130  GQMRQRLRDSRQQAQDRLDRLTPREYEIACLAAAGHPNKRIAAQLGISEKTVHSHRLNLM  189
            +        +R++     ++LTP+E E+A L A G  N+ IA  + I+ +TV+ HR  +M
Sbjct  120  SSAAV----ARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVM  175

Query  190  DKTGAGNLADLVR  202
            +K  AG+LA+L+R
Sbjct  176  EKMQAGSLAELIR  188

156) Msil_1825 in NC_011666


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  105 bits (380),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 85/192 (45%), Positives = 125/192 (66%), Gaps = 6/192 (3%)

Query  4    AVVHLIDDDEAVRQALGFLLMASGYAVRVYESAAVFIEGLAEAQPGCVVTDVRMPEVDGI  63
            A +HL+DDD AV +A +FLL + GY V+    +A F+   +  Q+G V+ D+RMP +DG 
Sbjct  2    ATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQ  61

Query  64   KLLRLMKAKRSRLPVIVMTGHADVPLAVEAMKAGAVDFLEKPFDDESllaairlaldrqa  123
             +   ++   S L+V+ +TGH+DVP+AVE MK GAVDFL+KP    +L AA+  AL   +
Sbjct  62   GVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSS  121

Query  124  rdariEDEFATIRARLEHLSPREREVLDGLVA-GLPNKSIAYDLKISPRTVEVHRANVMT  182
                  +    I    ++L+P+ERE L +LVA G+ N+ IA  ++I+ RTVEVHRA VM 
Sbjct  122  AAVARRE----IILCYQQLTPKERE-LASLVAKGFMNREIAEAMNIAVRTVEVHRARVME  176

Query  183  KMGAASLSDLVR  194
            KM A+SL++L+R
Sbjct  177  KMQAGSLAELIR  188

157) fixJ in NC_020061


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  104 bits (377),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 78/190 (42%), Positives = 123/190 (65%), Gaps = 4/190 (2%)

Query  7    TIHIVDDEEPARKSFAFMLTMNGYAVKVHQSGALFLSFAPGIHNGILVTDLRMPEMSGID  66
            TIH++DD+ +  ++ AF+L   GY VK    GA FL+ A+  + G+++ D+RMP + G +
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  67   LIRQLsvkkisipsivisGHGDVPVAVEAMKAGAVDFIEKPCEDAVIIEAIERASDHLHV  126
            +   L     +++ + ++GHGDVP+AVE MK GAVDF++KP     +  A+ERA   L V
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERA---LTV  119

Query  127  NGANVDESLAIQARIETLSERERQVLLAVVVGLPNKSIAHDLNISRRTVEVHRARVMSKM  186
            ++A V     I    + L+ +ER++   V  G+ N+ IA+ +NI+ RTVEVHRARVM KM
Sbjct  120  SSAAVARR-EIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKM  178

Query  187  RAKSIPHLVR  196
            +A S+++L+R
Sbjct  179  QAGSLAELIR  188

158) AZL_c01160 in NC_013857


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  104 bits (376),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 71/162 (44%), Positives = 108/162 (67%), Gaps = 4/162 (2%)

Query  37   RCCASAAEFLETVSPDQPGCAILDIRMPGMDGLDLQQEMIRRGLTLPVIIITGHGDVTAA  96
            +C + +A+FL   S  Q+G  +LD+RMP +DG ++++ + + G TL+V+++TGHGDV  A
Sbjct  29   KCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGVHDALRQCGSTLAVVFLTGHGDVPMA  88

Query  97   VRAFRAGAVDFLQKPFDEDLLIERVQEAFERDLAARRADVEAGEIRRRLALLSPRELEVM  156
            V   + GAVDFLQKP      +  +Q A+ER L+   A V   EI      L+P+E E+ 
Sbjct  89   VEQMKRGAVDFLQKPVS----VKPLQAALERALTVSSAAVARREIILCYQQLTPKERELA  144

Query  157  ELVAQGLPNKTIAHQLAIGIRTVETHRARVLEKMEARNAPEL  198
             LVA+G+ N+ IA+ + I++RTVE HRARV+EKM+A + +EL
Sbjct  145  SLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGSLAEL  186

159) Mpop_3891 in NC_010725


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  103 bits (374),  Expect = 6e-24, Method: Compositional matrix adjust.
 Identities = 81/202 (41%), Positives = 130/202 (65%), Gaps = 17/202 (8%)

Query  6    VHVVDDDPAMRDSVAFLLDTAGFDVRLYAAGTILLERLARPVRGCVLTDIRMPGLDGLAL  65
            +H++DDD A+ ++ AFLL++ G+DV+  + G+ +L + +    G VL D+RMP LDG ++
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGV  63

Query  66   FRCLRSAGHTHPVVMMTGHGDVPLAVEAMKLGACDFIEKPFDGEALLQALHGALERGGQN  125
               LR  G T +VV +TGHGDVP+AVE MK GA DF++KP      +++L++ALER    
Sbjct  64   HDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVS----VKPLQAALER----  115

Query  126  GMDPSPDPALHPTLHPSLQDFVRRLATLSERERQVLDHLVAGG-TSKEIGRRLGISPRTV  184
            ++  S+ +  +  +    Q+       L+ +ER+ L  LVA G  ++EI+  + I+ RTV
Sbjct  116  ALTVSSAAVARREIILCYQQ-------LTPKERE-LASLVAKGFMNREIAEAMNIAVRTV  167

Query  185  EIYRAKVMAKTRAGTLQELVRW  206
            E+ RA+VM K +AG+L EL+R+
Sbjct  168  EVHRARVMEKMQAGSLAELIRR  189

160) MYSTI_04028 in NC_020126


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  102 bits (370),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 83/197 (43%), Positives = 130/197 (66%), Gaps = 4/197 (2%)

Query  6    ATLFLVDDDESVlrglgrllraagHVTKSFSSPAQFLAQLSGDTPGCAVLDLRMPGLNGL  65
            AT+ L+DDD +V  + + LL + G   K  +  A+FLAQ S   +G  +LD+RMP L+G 
Sbjct  2    ATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQ  61

Query  66   ELQQVMASKGCHLPVIFITGHGDVPASVRAMKAGAVDFLLKPFDEQHLLAAIEQalrkda  125
             +++ +   G  L+V+F+TGHGDVP +V  MK GAVDFL KP   + L AA+E+AL   +
Sbjct  62   GVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSS  121

Query  126  aaragraeraVLHARHAALTPREREVCTLVAQGLTNKEVALRLGTTEKTIKVHRARVIQK  185
            AA A R      +     LTP+ERE+ +LVA+G+ N+E+A  +  + +T+ VHRARV++K
Sbjct  122  AAVARREIILCYQ----QLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEK  177

Query  186  LEVDSVAELVRFVDRLG  202
            ++ +S+AEL+R  ++++
Sbjct  178  MQAGSLAELIRRFEKMA  194

161) TVNIR_1517 in NC_019902


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  101 bits (365),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 79/189 (42%), Positives = 128/189 (68%), Gaps = 4/189 (2%)

Query  5    GAVVLVDDDPamrrslalalslaGYEVKAFACAGDLLRDLDPEQVGCLLLDLRMPDMSGl  64
            +++ L+DDD A+  + A+ L   GY+VK  + ++D+L +    Q G +LLD+RMP + G 
Sbjct  2    ATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQ  61

Query  65   elqqellqRGCVLPVIFMSAFGDIPTTVRALKGGALDFLEKPFSTESLITRVEEAFAIDA  124
             +++ L Q G  L+V+F+++ GD+P +V  +K GA+DFL+KP S  +L + +E A+++ +
Sbjct  62   GVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSS  121

Query  125  ALRADRDWRLSIAERARQLTRREREVMALVTEGLSNKEIARRFEISPRTVEKYRARVMEK  184
            A  A R+  L      +QLT +ERE+ +LV+ G+ N+EIA   +I+ RTVE  RARVMEK
Sbjct  122  AAVARREIILCY----QQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEK  177

Query  185  MQAANLADL  193
            MQA++LA+L
Sbjct  178  MQAGSLAEL  186

162) Tbd_1743 in NC_007404


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score =  100 bits (362),  Expect = 5e-23, Method: Compositional matrix adjust.
 Identities = 78/192 (41%), Positives = 129/192 (68%), Gaps = 10/192 (5%)

Query  10   IHIVDDDEALRRSLLFLFDSVGWRAQAYASADEFLAA---YRPGAPGCLVLDIRMPGMSG  66
            IH++DDD A+  +  FL++S+G   +  + + +FLA    Y++G    ++LD+RMP + G
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGV---VLLDMRMPVLDG  60

Query  67   LELQQVLRARGEVLPVIFITGHGDVSLAVQAMKQEACDFLEKPFKDQALLDAVGQAVRRS  126
              +++ LR  G  L+V+F+TGHGDV++AV+ MK+ A DFL+KP   ++L  A+ +A+  S
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVS  120

Query  127  RDDLAVEARRNQAHALLERLSPrerevarrvarGLPNKLIARELDISEKTVHVHRQHVME  186
               +   ARR+      ++L+P+ERE+A  VA+G+ N+ IA  ++I+ +TV+VHR +VME
Sbjct  121  SAAV---ARREIILC-YQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVME  176

Query  187  KTHTGSAAELAR  198
            K ++GS AEL R
Sbjct  177  KMQAGSLAELIR  188

163) fixJ in NC_017067


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score = 99.1 bits (357),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 80/190 (43%), Positives = 124/190 (66%), Gaps = 4/190 (2%)

Query  7    TVYVVEDDEAVRdslelllksdskPVKTYESANAFLKDYSDKMAGCIVLDIRMPGMDGME  66
            T+ +++DD AV ++  +LL S +  VK    +  FL + S   AG ++LD+RMP +DG  
Sbjct  3    TIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQG  62

Query  67   LQKKLNDKHSILPIIFVTGHGDVPMAVDAMKEGAVDFIQKPYReeallekieaaleQDQE  126
            ++  L +  S L+++F+TGHGDVPMAV+ MK GAVDF+QKP      +  ++AALE+   
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKP----VSVKPLQAALERALT  118

Query  127  QRKSLDEKQEIIRRVKSLTPREREIMDRMIAGQANKVIAIELEISQRTVEIHRSRVMHKM  186
               +   ++EII   + LTP+ERE+   +  G  N+ IA  ++I+ RTVE+HR+RVM+KM
Sbjct  119  VSSAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKM  178

Query  187  GTHSLAHLVR  196
             + SLA+L+R
Sbjct  179  QAGSLAELIR  188

164) fixJ in NC_006513


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score = 98.6 bits (355),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 80/191 (42%), Positives = 124/191 (65%), Gaps = 6/191 (3%)

Query  9    IHVVDDDAAFRRSLVFLLESVGWSVCAYASAEEFLAAHERPPADLGCLVLDIRMPTMSGL  68
            IH++DDD+A   +  FLLES+G  V   + + +FLA  + +  + G ++LD+RMP + G 
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLA--QASLYQAGVVLLDMRMPVLDGQ  61

Query  69   ELQAALRRRGWQAPIVFITGHGDVELAVEAMKHGASDFLQKPFRDQALLDAVATAVRRCA  128
             ++ ALR+ G   ++VF+TGHGDV +AVE MK+GA DFLQKP   ++L  A+  A+   +
Sbjct  62   GVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSS  121

Query  129  EDrsrtalrdaalaslarlsprEREVARLVAQGLPNKLVARELDISEKTVHVHRQHVMEK  188
                    R   +    +L+P+ERE+A LVA+G+ N+ +A  ++I+ +TV+VHR +VMEK
Sbjct  122  AA----VARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEK  177

Query  189  TEVGSAAELAR  199
             + GS AEL R
Sbjct  178  MQAGSLAELIR  188

165) fixJ in NC_012988


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score = 97.3 bits (350),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 77/190 (41%), Positives = 126/190 (67%), Gaps = 4/190 (2%)

Query  6    VHVIDDDPAMRDSVAFLLDTAGFDVRLYEagtallarltrplrgCILTDIRMPDLDGLAL  65
            +H++DDD A+ ++ AFLL++ G+DV+    G+ +LA+ +    G +L D+RMP LDG ++
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGV  63

Query  66   FRSLRSAGHTLPIVMMTGHGDVPLAVEAMKLGACDFIEKPFDGeallralqaaleqGGSN  125
              +LR  G TL++V +TGHGDVP+AVE MK GA DF++KP    +L  AL+ AL  +++ 
Sbjct  64   HDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAA  123

Query  126  GSVDPILQDFMRRLATLSERERQVLDHLVTGGTSKEIGRRLRISPRTVEIYRAKVMAKTR  185
             +   I+  + +    L+ +ER++   +  G  ++EI+  + I+ RTVE+ RA+VM K +
Sbjct  124  VARREIILCYQQ----LTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQ  179

Query  186  AGSLQELVRW  195
            AGSL EL+R+
Sbjct  180  AGSLAELIRR  189

166) Mchl_3813 in NC_011757


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score = 97.3 bits (350),  Expect = 5e-22, Method: Compositional matrix adjust.
 Identities = 77/190 (41%), Positives = 126/190 (67%), Gaps = 4/190 (2%)

Query  6    VHVIDDDPAMRDSVAFLLDTAGFDVRLYEagtallarltrplrgCILTDIRMPDLDGLAL  65
            +H++DDD A+ ++ AFLL++ G+DV+    G+ +LA+ +    G +L D+RMP LDG ++
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGV  63

Query  66   FRSLRSAGHTLPIVMMTGHGDVPLAVEAMKLGACDFIEKPFDGeallralqaaleqGGPN  125
              +LR  G TL++V +TGHGDVP+AVE MK GA DF++KP    +L  AL+ AL  +++ 
Sbjct  64   HDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAA  123

Query  126  GSVDPILQDFMRRLATLSERERQVLDHLVTGGTSKEIGRRLRISPRTVEIYRAKVMAKTR  185
             +   I+  + +    L+ +ER++   +  G  ++EI+  + I+ RTVE+ RA+VM K +
Sbjct  124  VARREIILCYQQ----LTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQ  179

Query  186  AGSLQELVRW  195
            AGSL EL+R+
Sbjct  180  AGSLAELIRR  189

167) Mext_3506 in NC_010172


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score = 97.3 bits (350),  Expect = 5e-22, Method: Compositional matrix adjust.
 Identities = 77/190 (41%), Positives = 126/190 (67%), Gaps = 4/190 (2%)

Query  6    VHVIDDDPAMRDSVAFLLDTAGFDVRLYEagtallarltrplrgCILTDIRMPDLDGLAL  65
            +H++DDD A+ ++ AFLL++ G+DV+    G+ +LA+ +    G +L D+RMP LDG ++
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGV  63

Query  66   FRSLRSAGHTLPIVMMTGHGDVPLAVEAMKLGACDFIEKPFDGeallralqaaleqGGPN  125
              +LR  G TL++V +TGHGDVP+AVE MK GA DF++KP    +L  AL+ AL  +++ 
Sbjct  64   HDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAA  123

Query  126  GSVDPILQDFMRRLATLSERERQVLDHLVTGGTSKEIGRRLRISPRTVEIYRAKVMAKTR  185
             +   I+  + +    L+ +ER++   +  G  ++EI+  + I+ RTVE+ RA+VM K +
Sbjct  124  VARREIILCYQQ----LTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQ  179

Query  186  AGSLQELVRW  195
            AGSL EL+R+
Sbjct  180  AGSLAELIRR  189

168) Bpro_4652 in NC_007948


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score = 97.0 bits (349),  Expect = 5e-22, Method: Compositional matrix adjust.
 Identities = 83/200 (42%), Positives = 129/200 (65%), Gaps = 13/200 (6%)

Query  7    ATVYIVDDDASVRDALAWLLRSRRLPSETFDSAEAFDARVSQQFEVKSPSCVLLDVRMAG  66
            AT+ ++DDD++V +A A LL S          +  F A+ S  ++   ++ VLLD+RM+ 
Sbjct  2    ATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASL-YQ---AGVVLLDMRMPV  57

Query  67   LSGLAMFEKLIGYGLLPTLPVIFLTGHADVPTAVDAVKRGAFDFCEKPFSDNALVDRIEQ  126
            L G ++ + L   G  +TL+V+FLTGH+DVP AV+ +KRGA DF +KP S ++L   +E+
Sbjct  58   LDGQGVHDALRQCG--STLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALER  115

Query  127  ALKFSAAALAQHSESISRQARLDGLTDRERDVMRLVVGGLPNKLVADQLDISVRTVEVHR  186
            AL  S+AA+A++   +  Q     LT +ER++  LV  G+ N+ +A+ ++I+VRTVEVHR
Sbjct  116  ALTVSSAAVARREIILCYQQ----LTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHR  171

Query  187  ARVFDKMGVKSAVELANLLR  206
            ARV +KM    A  LA+L+R
Sbjct  172  ARVMEKM---QAGSLAELIR  188

169) BC1002_5532 in NC_014118


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score = 96.5 bits (347),  Expect = 7e-22, Method: Compositional matrix adjust.
 Identities = 78/192 (41%), Positives = 120/192 (63%), Gaps = 8/192 (4%)

Query  6    TRVFIVDDDGSVRSALARLLRASGYQVECFDSPEAFLERADLTSMPACLVLDLQMPGMTG  65
            + + ++DDD +V +A A LL + GY+V C      FL +A L   ++ ++LD++MP + G
Sbjct  2    ATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQ-AGVVLLDMRMPVLDG  60

Query  66   LEVQRKLDQ---LLPIVFLTGHGDIGSSVDAMKGGAVDFLPKPVRDSlllaaveralara  122
              V+  L Q    L++VFLTGHGD+  +V+ MK GAVDFL KPV     + +++ AL RA
Sbjct  61   QGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPV----SVKPLQAALERA  116

Query  123  cvesrrrhereeieermrHLTRREREVMELVVTGRLNKQVASDLGAAEKTIKIHRARVME  182
               S     R EI    ++LT +ERE+  LV  G +N+++A  +  A +T+ +HRARVME
Sbjct  117  LTVSSAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVME  176

Query  183  KMKARSIVELVH  194
            KM+A S+ EL++
Sbjct  177  KMQAGSLAELIR  188

170) Reut_B3602 in NC_007348


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score = 96.5 bits (347),  Expect = 9e-22, Method: Compositional matrix adjust.
 Identities = 82/202 (41%), Positives = 122/202 (61%), Gaps = 8/202 (3%)

Query  6    SIVYVLDDDEIVLWLYRELLQHHGVVLRPFTSPRAFLDSYAPSPCECLVCDLRMPELCGL  65
            + + +LDDD  V      LL+  G  ++  T    FL   +      ++ D+RMP L G 
Sbjct  2    ATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQ  61

Query  66   GVQNELLSTGDCLPIIFVSGHAEVSSVVEAMRVGAFDFLEKPVDGERLVQTVRAALEHSR  125
            GV++ L   G  L+++F++GH++V+  VE M+ GA DFL+KPV     V+ ++AALE  R
Sbjct  62   GVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVS----VKPLQAALE--R  115

Query  126  GLHARRLAMSERRKRL--ATLTPKEREIAEHVASGKSSRQISEALNISVRTVENHRARVT  183
            +L     A++ R   L    LTPKERE+A  VA G  +R+I+EA+NI+VRTVE HRARV 
Sbjct  116  ALTVSSAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVM  175

Query  184  EKLCITSVAELVRLLYDLPDPG  205
            EK+   S+AEL+R +  ++ P 
Sbjct  176  EKMQAGSLAELIRRFEKMASPE  197

171) fixJ in NC_012808


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score = 96.2 bits (346),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 77/190 (41%), Positives = 125/190 (66%), Gaps = 4/190 (2%)

Query  6    VHVIDDDPAMRDSVAFLLDTAGFDVRLYEagtallarltrplrgCILTDIRMPDLDGLAL  65
            +H++DDD A+ ++ AFLL++ G+DV+    G+ +LA+ +    G +L D+RMP LDG ++
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGV  63

Query  66   FRSLRSAGHTLPIVMMTGHGDVPLAVEAMKLGACDFIEKPFDGeallralqaaleqGGHN  125
              +LR  G TL++V +TGHGDVP+AVE MK GA DF++KP    +L  AL+ AL  ++  
Sbjct  64   HDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAA  123

Query  126  GSVDPILQDFMRRLATLSERERQVLDHLVTGGTSKEIGRRLRISPRTVEIYRAKVMAKTR  185
             +   I+  + +    L+ +ER++   +  G  ++EI+  + I+ RTVE+ RA+VM K +
Sbjct  124  VARREIILCYQQ----LTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQ  179

Query  186  AGSLQELVRW  195
            AGSL EL+R+
Sbjct  180  AGSLAELIRR  189

172) CAP2UW1_2102 in NC_013194


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score = 96.0 bits (345),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 76/187 (41%), Positives = 116/187 (63%), Gaps = 8/187 (4%)

Query  7    LVDDDDAIRDSLSWLLESRGLHCLSYPSAEDFLAAWDPSLAGCLVLDIRMDGMSGPELFD  66
            L+DDD A+ ++ + LLES G +      + DFLA      AG ++LD+RM  + G  + D
Sbjct  6    LLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGVHD  65

Query  67   ILCERGSTLPVIFLTGHGDVPMAVSALKKGAFDFVEKPCNDNELVDRVIEALKLDENRRV  126
             L + GSTL+V+FLTGHGDVPMAV  +K+GA DF++KP + + L   +  AL       V
Sbjct  66   ALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALT------V  119

Query  127  AASDADSVNTLI--ARLTCREREVMELVLAGKLNKVIADELQISMRTVEVHRANLFEKMG  184
            +++     + ++   +LT +ERE+  LV  G +N+ IA+ ++I++RTVEVHRA + EKM 
Sbjct  120  SSAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQ  179

Query  185  VRTAVEL  191
              +  EL
Sbjct  180  AGSLAEL  186

173) amb0898 in NC_007626


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score = 95.7 bits (344),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 79/190 (42%), Positives = 126/190 (67%), Gaps = 5/190 (2%)

Query  7    IYVVDDDPAVRDSLRMLLEAGGHAVRAYPDAESFIAEGMTGTGPGCVVADVRMPGLSGld  66
            I ++DDD AV ++   LLE+ G  V+   ++  F+A++ +   +G V+ D+RMP L G +
Sbjct  4    IHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQA-SLYQAGVVLLDMRMPVLDGQG  62

Query  67   llrilqdrdidlpliVITGHADVSMAVQALKEGACDFIEKPFDDSVFMAAVTKALSRSER  126
            +   L++ +  L+++ +TGH+DV+MAV+ +K GA DF++KP     + AA+ +AL+ S  
Sbjct  63   VHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSA  122

Query  127  AWVERRRLDGIEARANSLTPREYEVMVLVAQGLSNKAAAQELGISVRTVEIHRARVMEKM  186
            A V RR    I    + LTP+E E+  LVA+G+ N+  A+ + I+VRTVE+HRARVMEKM
Sbjct  123  A-VARR---EIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKM  178

Query  187  AADSLSALVR  196
             A+SL+ L+R
Sbjct  179  QAGSLAELIR  188

174) C380_23075 in NC_018708


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score = 95.4 bits (343),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 82/200 (41%), Positives = 129/200 (65%), Gaps = 13/200 (6%)

Query  7    ATVYIVDDDASVREALAWLLRSRRLPSESFDSAEAFDAMLQKRPPQRQPCCLLLDVRMPG  66
            AT+ ++DDD++V +A A LL S          +  F A    +++  Q+  +LLD+RMP 
Sbjct  2    ATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLA----QASLYQAGVVLLDMRMPV  57

Query  67   MSGLALFDVLAARGDLATMPVIFLTGHADVPTAVDTVKRGAFDFCEKPFSDNALVDRIEQ  126
            + G ++ D L   G  +T++V+FLTGH+DVP AV+ +KRGA DF +KP S ++L   +E+
Sbjct  58   LDGQGVHDALRQCG--STLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALER  115

Query  127  ALSQSSERLAQVRERSDLQVRLSELTERERDVMYLVVAGLPNKLIADQLDISVRTVEVHR  186
            AL+ SS  +A    R ++ +   +LT +ER++  LV  G+ N+ IA+ ++I+VRTVEVHR
Sbjct  116  ALTVSSAAVA----RREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHR  171

Query  187  SRVFDKMQVKSAVELANLLR  206
            +RV +KMQ  S   LA+L+R
Sbjct  172  ARVMEKMQAGS---LAELIR  188

175) Bmul_3683 in NC_010086


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score = 93.6 bits (336),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 64/146 (44%), Positives = 97/146 (67%), Gaps = 8/146 (5%)

Query  53   LLIDVRMPGMSGFELFAQLRDAGLGAHHAVVFLTGHGDIPMAVDALRAGAYDFLEKPFSD  112
            +L+D+RMP + G  +   LR+ G  +  AVVFLTGHGD+PMAV+ ++ GA DFL+KP S 
Sbjct  49   VLLDMRMPVLDGQGVHDALRQCG--STLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVS-  105

Query  113  NRLVDRVVAGLDHAYAHAAPPEATPDER--FANLTPRERAIAERIVAGCTNREIADVLRI  170
               V  + A+L++A + ++++ A  +    + +LTP+ER +A  +  G  NREIA+ + I
Sbjct  106  ---VKPLQAALERALTVSSAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNI  162

Query  171  SVRTVEVHRARVFEKLDVKNAIGLAR  196
            +VRTVEVHRARV EK++  +   L R
Sbjct  163  AVRTVEVHRARVMEKMQAGSLAELIR  188

176) BMULJ_04834 in NC_010805


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score = 93.6 bits (336),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 64/146 (44%), Positives = 97/146 (67%), Gaps = 8/146 (5%)

Query  53   LLIDVRMPGMSGFELFAQLRDAGLGAHHAVVFLTGHGDIPMAVDALRAGAYDFLEKPFSD  112
            +L+D+RMP + G  +   LR+ G  +  AVVFLTGHGD+PMAV+ ++ GA DFL+KP S 
Sbjct  49   VLLDMRMPVLDGQGVHDALRQCG--STLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVS-  105

Query  113  NRLVDRVVAGLDHAYAHAAPPEATPDER--FANLTPRERAIAERIVAGCTNREIADVLRI  170
               V  + A+L++A + ++++ A  +    + +LTP+ER +A  +  G  NREIA+ + I
Sbjct  106  ---VKPLQAALERALTVSSAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNI  162

Query  171  SVRTVEVHRARVFEKLDVKNAIGLAR  196
            +VRTVEVHRARV EK++  +   L R
Sbjct  163  AVRTVEVHRARVMEKMQAGSLAELIR  188

177) Bpet4764 in NC_010170


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score = 93.6 bits (336),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 79/193 (41%), Positives = 122/193 (64%), Gaps = 7/193 (3%)

Query  1    MRKIYLVDDDEVVRDALGALFRSRGLSLDSYAGAGEFLQAWDADGLAREPACLLLDVRMA  60
            M  I L+DDD  V +A + L+ S G  +   + +++FL    A++   +++ +LLD+RM+
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFL----AQASLYQAGVVLLDMRMP  56

Query  61   GMSGLELFETLKERGLASHHAVIFLTGHGDIPMAVEALRGGAYYFLEKPYSGNQLVDRVL  120
             + G  + ++L++ G  S  AV+FLTGHGD+PMAVE ++ GA  FL+KP S + L +  L
Sbjct  57   VLDGQGVHDALRQCG--STLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPL-QAAL  113

Query  121  ESLAHVDaasaapglaaaaLDVLTPRERDIASHIVAGRTNREIADALNISVRTVEVHRAR  180
            E    V +A+ A        + LTP+ER++AS +  G  NREIA+A+NI+VRTVEVHRAR
Sbjct  114  ERALTVSSAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRAR  173

Query  181  LFAKLEVKSAVGL  193
            +  K++  S   L
Sbjct  174  VMEKMQAGSLAEL  186

178) fixJ in NC_010505


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score = 92.6 bits (332),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 71/176 (41%), Positives = 111/176 (64%), Gaps = 7/176 (3%)

Query  21   AFLLATDGLAVRVHASAVAFLEGVAVV-SGCVLTDVRMPDIDGIELLRRLKRRGSPAPVI  79
            AFLL + G  V+  + +  FL   ++  +G VL D+RMP +DG  +   L++ GS  +V+
Sbjct  18   AFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGVHDALRQCGSTLAVV  77

Query  80   VMTGHADVPLAVQAMREGARDFIEKPFDDEVLLASVRSALAQADRGAGQAAERDATRTRL  139
             +TGH+DVP+AV+ M+ GA DF++KP    V + ++++AL +A   ++ A  R       
Sbjct  78   FLTGHGDVPMAVEQMKRGAVDFLQKP----VSVKPLQAALERALTVSSAAVARREIILCY  133

Query  140  AALTERERQVLDGLVA-GKANKVIGLDLGISPRTVEIYRANVMSKLQAGSLSELVR  194
              LT +ER+ L +LVA G  N+ I+  + I+ RTVE+ RA VM K+QAGSL+EL+R
Sbjct  134  QQLTPKERE-LASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGSLAELIR  188

179) VAPA_1c53460 in NC_022247


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score = 92.3 bits (331),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 70/163 (43%), Positives = 105/163 (65%), Gaps = 7/163 (4%)

Query  46   LAEGPLPEQPLCLLLDVRMPGTSGLVLFDRLAERGLLDAMPVIFLTGHADVPTAVDAVKR  105
            LA+++L +  + +LLD+RMP   G  + D L + G   +++V+FLTGH+DVP AV+ +KR
Sbjct  38   LAQASLYQAGV-VLLDMRMPVLDGQGVHDALRQCG--STLAVVFLTGHGDVPMAVEQMKR  94

Query  106  GAFDFCEKPFSDNALVDRLEQALGASLRALEVRRVRRGLAGRIAELTDRERDVMRLVVEG  165
            GA DF +KP S ++L   LE+AL  S  A+     RR +     +LT +ER++  LV  G
Sbjct  95   GAVDFLQKPVSVKPLQAALERALTVSSAAVA----RREIILCYQQLTPKERELASLVAKG  150

Query  166  LPNKLIADQLAISVRTVEVHRARVFDKMEVKSAVELANRLRDL  208
            + N+ IA+ + I+VRTVEVHRARV +KM+  S  EL  R+  +
Sbjct  151  FMNREIAEAMNIAVRTVEVHRARVMEKMQAGSLAELIRRFEKM  193

180) Acav_4589 in NC_015138


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score = 91.5 bits (328),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 82/200 (41%), Positives = 125/200 (63%), Gaps = 13/200 (6%)

Query  7    ATVYIVDDDAGVREALAWLLRSRRVPSESFDSAEAFEAMLGDRPVLRQPCCLLLDVRMPG  66
            AT+ ++DDD++V +A A LL S          +  F A    ++ L Q+  +LLD+RMP 
Sbjct  2    ATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLA----QASLYQAGVVLLDMRMPV  57

Query  67   MSGLALFDRLAERGLIGALPVIFLTGHADVPTAVATVKRGAFDFCEKPFSDNLLVDRIEQ  126
            + G ++ D L + G  ++L+V+FLTGH+DVP AV  +KRGA DF +KP S + L   +E+
Sbjct  58   LDGQGVHDALRQCG--STLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALER  115

Query  127  ALAQSARYLEEAHQRNDLRHRLAELTERESDVMRLVVEGLPNKLIADQLDISVRTVEVHR  186
            AL+ S+     A  R ++     +LT +E ++  LV  G+ N+ IA+ ++I+VRTVEVHR
Sbjct  116  ALTVSS----AAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHR  171

Query  187  ARVFDKMQVKSAVELANLLR  206
            ARV +KMQ   A  LA+L+R
Sbjct  172  ARVMEKMQ---AGSLAELIR  188

181) amb3290 in NC_007626


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score = 89.9 bits (322),  Expect = 7e-20, Method: Compositional matrix adjust.
 Identities = 73/180 (41%), Positives = 113/180 (63%), Gaps = 5/180 (2%)

Query  17   AMRGSVAFLLASVGLDSRGFATAEAFLAQLPDDGRPGCVILDVRMPGMSGLELQRLLAER  76
            A+  + AFLL S+G D +  + +  FLAQ +   ++G V+LD+RMP + G  ++  L + 
Sbjct  12   AVTNACAFLLESLGYDVKCWTQGADFLAQ-ASLYQAGVVLLDMRMPVLDGQGVHDALRQC  70

Query  77   KFVLPLVIVTGHGDVPMAVSALKAGAHDFIEKPFNDQVLLDAVTAAIRASREKLADAANR  136
               L++V++TGHGDVPMAV  +K GA DF++KP + + L  A+  A+  S    A  A R
Sbjct  71   GSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSS---AAVARR  127

Query  137  DVVEKRLASLTRREREVLDRVLAGKPNKQIAFDLDLSIKTVEVHRHAVMEKMAARSVAEL  196
            +++      LT +ERE+   V  G  N++IA  ++++++TVEVHR  VMEKM A S+AEL
Sbjct  128  EII-LCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGSLAEL  186

182) Varpa_5872 in NC_014931


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score = 89.7 bits (321),  Expect = 9e-20, Method: Compositional matrix adjust.
 Identities = 66/151 (44%), Positives = 97/151 (65%), Gaps = 6/151 (3%)

Query  58   LLLDVRMPGTSGLVLFDRLAERGLLDAMPVIFLTGHADVPTAVDAVKRGAFDFCEKPFSD  117
            +LLD+RMP   G  + D L + G   +++V+FLTGH+DVP AV+ +KRGA DF +KP S 
Sbjct  49   VLLDMRMPVLDGQGVHDALRQCG--STLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSV  106

Query  118  NALVDRIEQALGASLRALEVQRVRHSLAGRIAELTDRERDVMRLVVEGLPNKLIADQLAI  177
            ++L   +E+AL  S  A+     R+ +     +LT +ER++  LV  G+ N+ IA+ + I
Sbjct  107  KPLQAALERALTVSSAAVA----RREIILCYQQLTPKERELASLVAKGFMNREIAEAMNI  162

Query  178  SVRTVEVHRARVFEKMEVKSAVELANRLRDL  208
            +VRTVEVHRARV EKM+  S  EL  R+  +
Sbjct  163  AVRTVEVHRARVMEKMQAGSLAELIRRFEKM  193

183) Pnap_3894 in NC_008781


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score = 86.8 bits (310),  Expect = 6e-19, Method: Compositional matrix adjust.
 Identities = 71/149 (48%), Positives = 101/149 (68%), Gaps = 9/149 (6%)

Query  58   VLLDVRMGALSGLAMFEKLITYGLLPTLPVIFLTGHADVPTAVDSVKRGAFDFFEKPFSD  117
            VLLD+RM  L G ++ + L   G  +TL+V+FLTGH+DVP AV+ +KRGA DF++KP S 
Sbjct  49   VLLDMRMPVLDGQGVHDALRQCG--STLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSV  106

Query  118  NALVDRIEqalvqsaaalvqHSQATGLRAQQDSLTERERAVMLLVVEGLPNKLVADQLDI  177
            ++L   +E+AL  S+AA+    +   L  QQ  LT +ER +  LV  G+ N+ +A+ ++I
Sbjct  107  KPLQAALERALTVSSAAVA--RREIILCYQQ--LTPKERELASLVAKGFMNREIAEAMNI  162

Query  178  SVRTVEVHRARVFEKMGVKSAVELANLLR  206
            +VRTVEVHRARV EKM    A  LA+L+R
Sbjct  163  AVRTVEVHRARVMEKM---QAGSLAELIR  188

184) fixJ in NC_010505


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score = 86.8 bits (310),  Expect = 7e-19, Method: Compositional matrix adjust.
 Identities = 84/192 (44%), Positives = 126/192 (66%), Gaps = 7/192 (3%)

Query  5    APVHIVDDDLAVRQALAFLLATDGLAVRVHDSATAFLAAET-ERVGCVVTDVRMPGIDGV  63
            A +H++DDD AV +A AFLL + G  V+    ++ FLA  +  + G V+ D+RMP +DG 
Sbjct  2    ATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQ  61

Query  64   ELLHRLRQRGGLPPVIVMTGHADVALAVEAMKAGAVDFIEKPFDDEVllasirsalaraD  123
             + + LRQ G+  +V+ +TGH+DV++AVE MK GAVDF++KP    V + ++++AL RA 
Sbjct  62   GVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKRGAVDFLQKP----VSVKPLQAALERAL  117

Query  124  RTSKRASERDAVrarlaeltererQVLEGLVA-GKANKVIGLDLGISPRTVEIYRANVMS  182
              S  A  R  +     +LT +ER+ L +LVA G  N+ I+  + I+ RTVE+ RA VM 
Sbjct  118  TVSSAAVARREIILCYQQLTPKERE-LASLVAKGFMNREIAEAMNIAVRTVEVHRARVME  176

Query  183  KLQAGSLSELVR  194
            K+QAGSL+EL+R
Sbjct  177  KMQAGSLAELIR  188

185) VAPA_1c40830 in NC_022247


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score = 85.7 bits (306),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 67/162 (42%), Positives = 100/162 (62%), Gaps = 5/162 (3%)

Query  36   ASGEAFLAGADLQRPGCVVLDLRMEGMSGLQVFDALRAQDSPLVVIFLSGHGDIPMAVEA  95
            + G  FLA A L ++G V+LD+RM  + G  V DALR  +S L V+FL+GHGD+PMAVE 
Sbjct  32   TQGADFLAQASLYQAGVVLLDMRMPVLDGQGVHDALRQCGSTLAVVFLTGHGDVPMAVEQ  91

Query  96   VQNGAFGWLEKPCNDERLLESIAKALQKAEEIAVrrqarqaaqaLWSKLTPREMQVARLV  155
            ++ GA + L+KP +   L  ++ +AL     ++    AR+       +LTP+E ++A LV
Sbjct  92   MKRGAVDFLQKPVSVKPLQAALERAL----TVSSAAVARREIILCYQQLTPKERELASLV  147

Query  156  AQGLPNKRIALELAPLEQRTVETHRAHVFAKLGLSNSHELDR  197
            A+G+ N+ IA E   +  RTVE HRA+V  K+  ++  EL R
Sbjct  148  AKGFMNREIA-EAMNIAVRTVEVHRARVMEKMQAGSLAELIR  188

186) Thivi_0850 in NC_018012


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score = 84.9 bits (303),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 75/173 (44%), Positives = 117/173 (68%), Gaps = 4/173 (2%)

Query  23   LIESTGLSVQTYESADVFLASHYPGRPGCLLLDVRMPGMSGLELQGYLMRQGYRLPVILI  82
            L+ES G  V+    +  FLA     ++G +LLD+RMP + G  +++ L + G  L+V+++
Sbjct  20   LLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGVHDALRQCGSTLAVVFL  79

Query  83   TGHgdvamavkamkagavdFIEKPFHDEDLLRSIRNALEFDQKHRASRSAKADIAMRLAE  142
            TGHGDV+MAV  MK GAVDF++KP      +++++ ALE      ++  A+ +I +   +
Sbjct  80   TGHGDVPMAVEQMKRGAVDFLQKPVS----VKPLQAALERALTVSSAAVARREIILCYQQ  135

Query  143  LTPREHEVMAMVTDGKSNREIAAALGVSSKTVEAHRARVMEKMRAESLAELVR  195
            LTP+E+E+ ++V+ G  NREIA A+ ++ +TVE HRARVMEKM+A SLAEL+R
Sbjct  136  LTPKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGSLAELIR  188

187) Vapar_5156 in NC_012791


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score = 84.7 bits (302),  Expect = 3e-18, Method: Compositional matrix adjust.
 Identities = 63/147 (43%), Positives = 93/147 (64%), Gaps = 6/147 (4%)

Query  62   VRMPGTSGLVLFDRLAERGLLDAMPVIFLTGHADVPTAVDAVKRGAFDFCEKPFSDNALV  121
            +RMP   G  + D L + G   +++V+FLTGH+DVP AV+ +KRGA DF +KP S ++L 
Sbjct  53   MRMPVLDGQGVHDALRQCG--STLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQ  110

Query  122  DRIEQALGASLRALEVRRVRRSLAGRVAELTERERDVMRLVVEGLPNKLIADQLAISVRT  181
              +E+AL  S  A+     RR +     +LT +ER++  LV  G+ N+ IA+ + I+VRT
Sbjct  111  AALERALTVSSAAVA----RREIILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRT  166

Query  182  VEVHRARVFDKMEVKSAVELANRLRDL  208
            VEVHRARV +KM+  S  EL  R+  +
Sbjct  167  VEVHRARVMEKMQAGSLAELIRRFEKM  193

188) Snov_3550 in NC_014217


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score = 83.4 bits (297),  Expect = 7e-18, Method: Compositional matrix adjust.
 Identities = 63/157 (41%), Positives = 102/157 (65%), Gaps = 4/157 (2%)

Query  54   DQFRAEADATAPACLLLDVRMPGISGLEFQDQLAGFAPDLPVIFITGHGDVPMSVRAMKA  113
             +F A+A    ++ +LLD+RMP + G   +D L   ++ L+V+F+TGHGDVPM+V  MK 
Sbjct  35   ADFLAQASLYQAGVVLLDMRMPVLDGQGVHDALRQCGSTLAVVFLTGHGDVPMAVEQMKR  94

Query  114  GAVDFLQKPWSEQAVLDAVFSALARSRARAQVSSERDalarraatltprereVMLLVTRG  173
            GAVDFLQKP      + ++ +AL R+ + +  +  R  +      LTP+ERE+  LV++G
Sbjct  95   GAVDFLQKP----VSVKPLQAALERALTVSSAAVARREIILCYQQLTPKERELASLVAKG  150

Query  174  LANKQIAYELGLQLITVKIHRGNVMRKMHAASLVDLV  210
            + N++IA  + + + TV +HR+ VM KM+A+SL +L+
Sbjct  151  FMNREIAEAMNIAVRTVEVHRARVMEKMQAGSLAELI  187

189) Vapar_3944 in NC_012791


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score = 82.8 bits (295),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 68/168 (41%), Positives = 102/168 (61%), Gaps = 5/168 (2%)

Query  30   HAVQAFASGEAFLAGADLQRPGCVVLDLRMEGMSGLQVFDALRAQDSPLVVIFLSGHGDI  89
              V+  + G  FLA A L ++G V+LD+RM  + G  V DALR  +S L V+FL+GHGD+
Sbjct  26   YDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGVHDALRQCGSTLAVVFLTGHGDV  85

Query  90   PMAVEAVQNGAFGWLEKPCNDERLLESIAKALQKaeeialrrqarqaaealwaKLTPREM  149
            PMAVE ++ GA + L+KP +   L  ++ +AL     ++    AR+       +LTP+E 
Sbjct  86   PMAVEQMKRGAVDFLQKPVSVKPLQAALERAL----TVSSAAVARREIILCYQQLTPKER  141

Query  150  QVARLVAQGLPNKRIALELAPLEQRTVETHRAHVFAKLGLSNSHELDR  197
            ++A LVA+G+ N+ IA E   +  RTVE HRA+V  K+  ++  EL R
Sbjct  142  ELASLVAKGFMNREIA-EAMNIAVRTVEVHRARVMEKMQAGSLAELIR  188

190) CtCNB1_4745 in NC_013446


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score = 82.1 bits (292),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 69/169 (41%), Positives = 109/169 (65%), Gaps = 13/169 (7%)

Query  35   CYRNAEEF-EQAVLQTSPVTRRPCCLLLDMRMTGMSGLSLFNRMLERGQIEAMPVIFLTG  93
            C  ++ +F  QA L  + V      +LLDMRM  + G ++ + + + G   +++V+FLTG
Sbjct  30   CWTQGADFLAQASLYQAGV------VLLDMRMPVLDGQGVHDALRQCG--STLAVVFLTG  81

Query  94   HADVPTAVDTVKRGAFDFCEKPFSDNALVDRVeqalalsaehlaalqaREEVRSRLDELT  153
            H+DVP AV+ +KRGA DF +KP S ++L   +E+AL++S+  +A    R E+    ++LT
Sbjct  82   HGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAAVA----RREIILCYQQLT  137

Query  154  DREKDVMKLVVEGVPNKLIADQLDISVRTVEVHRARVFDKMQVKSAVEL  202
             +E+++  LV  G  N+ IA+ ++I+VRTVEVHRARV +KMQ  S  EL
Sbjct  138  PKERELASLVAKGFMNREIAEAMNIAVRTVEVHRARVMEKMQAGSLAEL  186

191) Veis_4829 in NC_008786


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score = 78.1 bits (277),  Expect = 3e-16, Method: Compositional matrix adjust.
 Identities = 71/149 (48%), Positives = 104/149 (70%), Gaps = 9/149 (6%)

Query  58   LLLDMRMPGMSGLALFDLLAQRGDLGTLPVIFLTGHADVPTAVDTVKRGAFDFCEKPFSD  117
            +LLDMRMP + G ++ D L Q G  +TL+V+FLTGH+DVP AV+ +KRGA DF +KP S 
Sbjct  49   VLLDMRMPVLDGQGVHDALRQCG--STLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSV  106

Query  118  NALVDRIEQALAESARRLAQLRERSdlqlrlreltererdvldrVVAGMPNKLIADQLEI  177
            ++L   +E+AL+ S+  +A    R ++ L  ++LT +ER++   V  G  N+ IA+ ++I
Sbjct  107  KPLQAALERALTVSSAAVA----RREIILCYQQLTPKERELASLVAKGFMNREIAEAMNI  162

Query  178  SVRTVEVHRARVFDKMQVKSAVELANLLR  206
            +VRTVEVHRARV +KMQ  S   LA+L+R
Sbjct  163  AVRTVEVHRARVMEKMQAGS---LAELIR  188

192) Varpa_1852 in NC_014931


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score = 77.1 bits (273),  Expect = 5e-16, Method: Compositional matrix adjust.
 Identities = 69/168 (42%), Positives = 104/168 (62%), Gaps = 5/168 (2%)

Query  31   YAVQTFASGEAFLASADIQRAGCVVLDLRMEGMSGLQVFDALRAQDSPLVVLFLSGHGDI  90
            Y V+  + G  FLA A + +AG V+LD+RM  + G  V DALR  +S L V+FL+GHGD+
Sbjct  26   YDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGVHDALRQCGSTLAVVFLTGHGDV  85

Query  91   PMAIEAVQNGAFGWLEKPCNDERLLESiakalqqaqaiavrrqarqaaqllwaKLTPREM  150
            PMA+E ++ GA + L+KP +   L  +    L++A +++    AR+   L   +LTP+E 
Sbjct  86   PMAVEQMKRGAVDFLQKPVSVKPLQAA----LERALTVSSAAVARREIILCYQQLTPKER  141

Query  151  QVARLVAEGKPNKKIALELAPLELRTVETHRAHVFAKLGLSNSHELDR  198
            ++A LVA G  N+ IA E   + +RTVE HRA+V  K+  ++  EL R
Sbjct  142  ELASLVAKGFMNREIA-EAMNIAVRTVEVHRARVMEKMQAGSLAELIR  188

193) Mpe_A0209 in NC_008825


> AJ224978|4|G4|4456869|CAB37412.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|-|2310..2930|ttrR|-|TtrR
Length=206

 Score = 73.4 bits (259),  Expect = 7e-15, Method: Compositional matrix adjust.
 Identities = 81/199 (41%), Positives = 122/199 (62%), Gaps = 13/199 (6%)

Query  14   LPVVHLVDDEAVVRNAIAWLLRTRRLLAEPHESAEAFEAMLAARGDAILNAPTCVLLDMR  73
            ++ +HL+DD++ V NA A LL +          +  F A      +A L  +  VLLDMR
Sbjct  1    MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLA------QASLYQAGVVLLDMR  54

Query  74   MPGGMSGLQLFERLIEQRLLAAMPVIFLTGHGDVATAVAAIQQGAFDFVEKPFSDNSLVD  133
            MP  + G  + + L +    ++++V+FLTGHGDV+ AV  +++GA DF++KP S ++L  
Sbjct  55   MPV-LDGQGVHDALRQCG--STLAVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQA  111

Query  134  RIERALAASRSTLEARRAGAlmrqrlteltererevmmlVIDGRPNKLIAHALDISVRTV  193
             +ERAL+ S +++ ARR    +     +LT +ERE+  LV  G  N+ IA+A++I+VRTV
Sbjct  112  ALERALTVSSAAV-ARRE---IILCYQQLTPKERELASLVAKGFMNREIAEAMNIAVRTV  167

Query  194  EVHRARVFEKMGVKSAVEL  212
            EVHRARV EKM   S  EL
Sbjct  168  EVHRARVMEKMQAGSLAEL  186