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Homologs of unnamed gene of AF453441

DNA-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) ECSP_1481
( - )

NC_013008
(Escherichia coli TW14359)

e-205

99.7

2) SFxv_3828
( - )

NC_017328
(Shigella flexneri 2002017)

e-203

99.7

3) SFxv_0259
( - )

NC_017328
(Shigella flexneri 2002017)

e-203

99.7

4) SFxv_1869
( - )

NC_017328
(Shigella flexneri 2002017)

e-203

99.5

5) SFxv_1976
( - )

NC_017328
(Shigella flexneri 2002017)

e-202

99.5

6) EcSMS35_3227
( - )

NC_010498
(Escherichia coli SMS-3-5)

e-146

94.7

7) unnamed
( - )

NC_004431
(Escherichia coli CFT073)

e-134

95.1

8) unnamed
( - )

NC_004431
(Escherichia coli CFT073)

e-133

9) insC
( - )

NC_011745
(Escherichia coli ED1a)

e-133

10) insC
( - )

NC_011742
(Escherichia coli S88)

e-133

• Sequence Alignments

1) ECSP_1481 in NC_013008


>AF453441|4|G4|18034498|AAL57520.1|Escherichia_coli_83/39|-|2035..2400|-|-|IS2 
          Length = 366

 Score = 710 bits (1833), Expect = e-205
 Identities = 362/363 (100%)
 Strand = Plus / Plus

Query: 1   atgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgca 60

Query: 61  attgttcagcagagctttgaaccggggatgacggtctccctcgttgcccggcaacatggt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  attgttcagcagagctttgaaccggggatgacggtctccctcgttgcccggcaacatggt 120

Query: 121 gtagcagccagccagttatttctctggcgtaagcaatactaggaaggaagtcttactgct 180
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 121 gtagcagccagccagttatttctctggcgtaagcaataccaggaaggaagtcttactgct 180

Query: 181 gtcgccgccggagaacaggttgttcctgcctctgaacttgctgccgccatgaagcagatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtcgccgccggagaacaggttgttcctgcctctgaacttgctgccgccatgaagcagatt 240

Query: 241 aaagaactccagcgcctgctcggcaagaaaacgatggaaaatgaactcctcaaagaagcc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaagaactccagcgcctgctcggcaagaaaacgatggaaaatgaactcctcaaagaagcc 300

Query: 301 gttgaatatggacgggcaaaaaagtggatagcgcacgcgcccttattgcccggggatggg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gttgaatatggacgggcaaaaaagtggatagcgcacgcgcccttattgcccggggatggg 360

Query: 361 gag 363
           |||
Sbjct: 361 gag 363

2) SFxv_0259 in NC_017328


>AF453441|4|G4|18034498|AAL57520.1|Escherichia_coli_83/39|-|2035..2400|-|-|IS2 
          Length = 366

 Score = 705 bits (1820), Expect = e-203
 Identities = 365/367 (99%)
 Strand = Plus / Plus

Query: 46  atgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgca 105
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgca 60

Query: 106 attgttcagcagagctttgaaccggggatgacggtctccctcgttgcccggcaacatggt 165
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  attgttcagcagagctttgaaccggggatgacggtctccctcgttgcccggcaacatggt 120

Query: 166 gtagcagccagccagttatttctctggcgtaagcaataccaggaaggaagtcttactgct 225
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtagcagccagccagttatttctctggcgtaagcaataccaggaaggaagtcttactgct 180

Query: 226 gtggccgccggagaacaggttgttcctgcctctgaacttgctgccgccatgaagcagatt 285
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtcgccgccggagaacaggttgttcctgcctctgaacttgctgccgccatgaagcagatt 240

Query: 286 aaagaactccagcgcctggctcggcaagaaaacgatggaaaatgaactcctcaaagaagc 345
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaagaactccagcgcctg-ctcggcaagaaaacgatggaaaatgaactcctcaaagaagc 299

Query: 346 cgttgaatatggacgggcaaaaaagtggatagcgcacgcgcccttattgcccggggatgg 405
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 cgttgaatatggacgggcaaaaaagtggatagcgcacgcgcccttattgcccggggatgg 359

Query: 406 ggagtaa 412
           |||||||
Sbjct: 360 ggagtaa 366

3) SFxv_3828 in NC_017328


>AF453441|4|G4|18034498|AAL57520.1|Escherichia_coli_83/39|-|2035..2400|-|-|IS2 
          Length = 366

 Score = 705 bits (1820), Expect = e-203
 Identities = 365/367 (99%)
 Strand = Plus / Plus

Query: 46  atgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgca 105
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgca 60

Query: 106 attgttcagcagagctttgaaccggggatgacggtctccctcgttgcccggcaacatggt 165
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  attgttcagcagagctttgaaccggggatgacggtctccctcgttgcccggcaacatggt 120

Query: 166 gtagcagccagccagttatttctctggcgtaagcaataccaggaaggaagtcttactgct 225
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtagcagccagccagttatttctctggcgtaagcaataccaggaaggaagtcttactgct 180

Query: 226 gtggccgccggagaacaggttgttcctgcctctgaacttgctgccgccatgaagcagatt 285
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtcgccgccggagaacaggttgttcctgcctctgaacttgctgccgccatgaagcagatt 240

Query: 286 aaagaactccagcgcctggctcggcaagaaaacgatggaaaatgaactcctcaaagaagc 345
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaagaactccagcgcctg-ctcggcaagaaaacgatggaaaatgaactcctcaaagaagc 299

Query: 346 cgttgaatatggacgggcaaaaaagtggatagcgcacgcgcccttattgcccggggatgg 405
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 cgttgaatatggacgggcaaaaaagtggatagcgcacgcgcccttattgcccggggatgg 359

Query: 406 ggagtaa 412
           |||||||
Sbjct: 360 ggagtaa 366

4) SFxv_1869 in NC_017328


>AF453441|4|G4|18034498|AAL57520.1|Escherichia_coli_83/39|-|2035..2400|-|-|IS2 
          Length = 366

 Score = 703 bits (1813), Expect = e-203
 Identities = 364/367 (99%)
 Strand = Plus / Plus

Query: 46  atgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgca 105
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgca 60

Query: 106 attgttcagcagagctttgaaccggggatgacggtctccctcgttgcccggcaacatggt 165
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  attgttcagcagagctttgaaccggggatgacggtctccctcgttgcccggcaacatggt 120

Query: 166 gtagcagccagccagctatttctctggcgtaagcaataccaggaaggaagtcttactgct 225
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtagcagccagccagttatttctctggcgtaagcaataccaggaaggaagtcttactgct 180

Query: 226 gtggccgccggagaacaggttgttcctgcctctgaacttgctgccgccatgaagcagatt 285
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtcgccgccggagaacaggttgttcctgcctctgaacttgctgccgccatgaagcagatt 240

Query: 286 aaagaactccagcgcctggctcggcaagaaaacgatggaaaatgaactcctcaaagaagc 345
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaagaactccagcgcctg-ctcggcaagaaaacgatggaaaatgaactcctcaaagaagc 299

Query: 346 cgttgaatatggacgggcaaaaaagtggatagcgcacgcgcccttattgcccggggatgg 405
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 cgttgaatatggacgggcaaaaaagtggatagcgcacgcgcccttattgcccggggatgg 359

Query: 406 ggagtaa 412
           |||||||
Sbjct: 360 ggagtaa 366

5) SFxv_1976 in NC_017328


>AF453441|4|G4|18034498|AAL57520.1|Escherichia_coli_83/39|-|2035..2400|-|-|IS2 
          Length = 366

 Score = 702 bits (1813), Expect = e-202
 Identities = 364/367 (99%)
 Strand = Plus / Plus

Query: 46  atgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgca 105
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgca 60

Query: 106 attgttcagcagagctttgaaccggggatgacggtctccctcgttgcccggcaacatggt 165
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  attgttcagcagagctttgaaccggggatgacggtctccctcgttgcccggcaacatggt 120

Query: 166 gtagcagccagccagttatttctctggcgtaagcaataccaggaaggaagtcttactgct 225
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtagcagccagccagttatttctctggcgtaagcaataccaggaaggaagtcttactgct 180

Query: 226 gtggccgccggagaacaggttgttcctgcctctgaacttgctgccgccatgaagcagatt 285
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtcgccgccggagaacaggttgttcctgcctctgaacttgctgccgccatgaagcagatt 240

Query: 286 aaagaactccagcgcctggctcggcaagaaaacgatgaaaaatgaactcctcaaagaagc 345
           |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 241 aaagaactccagcgcctg-ctcggcaagaaaacgatggaaaatgaactcctcaaagaagc 299

Query: 346 cgttgaatatggacgggcaaaaaagtggatagcgcacgcgcccttattgcccggggatgg 405
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 cgttgaatatggacgggcaaaaaagtggatagcgcacgcgcccttattgcccggggatgg 359

Query: 406 ggagtaa 412
           |||||||
Sbjct: 360 ggagtaa 366

6) EcSMS35_3227 in NC_010498


>AF453441|4|G4|18034498|AAL57520.1|Escherichia_coli_83/39|-|2035..2400|-|-|IS2 
          Length = 366

 Score = 515 bits (1328), Expect = e-146
 Identities = 270/285 (95%)
 Strand = Plus / Plus

Query: 1   atgattgatgtcttaggaccggagaaacgcagacggcgtactacacaggaaaagatcgct 60
           ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| 
Sbjct: 1   atgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgca 60

Query: 61  attgttcagcagagctttgaacagggaatgacggtctcccttgttgcccggcaacacggt 120
           |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||| |||
Sbjct: 61  attgttcagcagagctttgaaccggggatgacggtctccctcgttgcccggcaacatggt 120

Query: 121 gtggcagccagccagttatttctctggcgcaagcaataccaggagggaagtcttactgct 180
           || |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 121 gtagcagccagccagttatttctctggcgtaagcaataccaggaaggaagtcttactgct 180

Query: 181 gtggctgccggagaacaggtcgttcctgcctctgaacttgctgctgccatgaagcagatt 240
           || || |||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 181 gtcgccgccggagaacaggttgttcctgcctctgaacttgctgccgccatgaagcagatt 240

Query: 241 aaagaactccagcgcctgctcggcaaaaaaacgatggaaaatgaa 285
           |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 241 aaagaactccagcgcctgctcggcaagaaaacgatggaaaatgaa 285

7) unnamed in NC_004431


>AF453441|4|G4|18034498|AAL57520.1|Escherichia_coli_83/39|-|2035..2400|-|-|IS2 
          Length = 366

 Score = 476 bits (1227), Expect = e-134
 Identities = 250/263 (95%)
 Strand = Plus / Minus

Query: 8   ccgagcaggcgctggagttctttaatctgcttcatggcagcagcaagttcagaggcagga 67
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 263 ccgagcaggcgctggagttctttaatctgcttcatggcggcagcaagttcagaggcagga 204

Query: 68  acgacctgttctcctgcggccacagcactaagacttccctcctggtattgcttgcgccag 127
           || ||||||||||| ||||| |||||| |||||||||| |||||||||||||| ||||||
Sbjct: 203 acaacctgttctccggcggcgacagcagtaagacttccttcctggtattgcttacgccag 144

Query: 128 agaaataactggctggctgccacaccatgttgccgggcaacaagggagaccgtcattccc 187
           |||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||
Sbjct: 143 agaaataactggctggctgctacaccatgttgccgggcaacgagggagaccgtcatcccc 84

Query: 188 ggttcaaagctctgctgaacaatagcgatcttttcctgtgtagtacgccgtctgcgtttc 247
           ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 83  ggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttc 24

Query: 248 tccggtcctaagacatcaatcat 270
           ||||| |||||||||||||||||
Sbjct: 23  tccggccctaagacatcaatcat 1

8) unnamed in NC_004431


>AF453441|4|G4|18034498|AAL57520.1|Escherichia_coli_83/39|-|2035..2400|-|-|IS2 
          Length = 366

 Score = 472 bits (1217), Expect = e-133
 Identities = 247/260 (95%)
 Strand = Plus / Plus

Query: 92  atgattgatgtcttaggaccggagaaacgcagacggcgtactacacaggaaaagatcgct 151
           ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| 
Sbjct: 1   atgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgca 60

Query: 152 attgttcagcagagctttgaaccgggaatgacggtctcccttgttgcccggcaacacggt 211
           |||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||
Sbjct: 61  attgttcagcagagctttgaaccggggatgacggtctccctcgttgcccggcaacatggt 120

Query: 212 gtggcagccagccagttatttctctggcgcaagcaataccaggagggaagtcttactgct 271
           || |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 121 gtagcagccagccagttatttctctggcgtaagcaataccaggaaggaagtcttactgct 180

Query: 272 gtggccgcaggagaacaggtcgttcctgcctctgaacttgctgctgccatgaagcagatt 331
           || ||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 181 gtcgccgccggagaacaggttgttcctgcctctgaacttgctgccgccatgaagcagatt 240

Query: 332 aaagaactccagcgcctgct 351
           ||||||||||||||||||||
Sbjct: 241 aaagaactccagcgcctgct 260

9) insC in NC_011745


>AF453441|4|G4|18034498|AAL57520.1|Escherichia_coli_83/39|-|2035..2400|-|-|IS2 
          Length = 366

 Score = 472 bits (1217), Expect = e-133
 Identities = 247/260 (95%)
 Strand = Plus / Plus

Query: 46  atgattgatgtcttaggaccggagaaacgcagacggcgtactacacaggaaaagatcgct 105
           ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| 
Sbjct: 1   atgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgca 60

Query: 106 attgttcagcagagctttgaaccgggaatgacggtctcccttgttgcccggcaacacggt 165
           |||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||
Sbjct: 61  attgttcagcagagctttgaaccggggatgacggtctccctcgttgcccggcaacatggt 120

Query: 166 gtggcagccagccagttatttctctggcgcaagcaataccaggagggaagtcttactgct 225
           || |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 121 gtagcagccagccagttatttctctggcgtaagcaataccaggaaggaagtcttactgct 180

Query: 226 gtggccgcaggagaacaggtcgttcctgcctctgaacttgctgctgccatgaagcagatt 285
           || ||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 181 gtcgccgccggagaacaggttgttcctgcctctgaacttgctgccgccatgaagcagatt 240

Query: 286 aaagaactccagcgcctgct 305
           ||||||||||||||||||||
Sbjct: 241 aaagaactccagcgcctgct 260

10) insC in NC_011742


>AF453441|4|G4|18034498|AAL57520.1|Escherichia_coli_83/39|-|2035..2400|-|-|IS2 
          Length = 366

 Score = 472 bits (1217), Expect = e-133
 Identities = 247/260 (95%)
 Strand = Plus / Plus

Query: 46  atgattgatgtcttaggaccggagaaacgcagacggcgtactacacaggaaaagatcgct 105
           ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| 
Sbjct: 1   atgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgca 60

Query: 106 attgttcagcagagctttgaaccgggaatgacggtctcccttgttgcccggcaacacggt 165
           |||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||
Sbjct: 61  attgttcagcagagctttgaaccggggatgacggtctccctcgttgcccggcaacatggt 120

Query: 166 gtggcagccagccagttatttctctggcgcaagcaataccaggagggaagtcttactgct 225
           || |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 121 gtagcagccagccagttatttctctggcgtaagcaataccaggaaggaagtcttactgct 180

Query: 226 gtggccgcaggagaacaggtcgttcctgcctctgaacttgctgctgccatgaagcagatt 285
           || ||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 181 gtcgccgccggagaacaggttgttcctgcctctgaacttgctgccgccatgaagcagatt 240

Query: 286 aaagaactccagcgcctgct 305
           ||||||||||||||||||||
Sbjct: 241 aaagaactccagcgcctgct 260