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PAthogenisity Island DataBase (PAI DB)

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Homologs of phfS gene of AF346500

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) phfS
( YP_003039811.1 )

major fimbrial subunit precursor

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

4e-30

2) phfS
( NP_928331.1 )

hypothetical protein

NC_005126
(Photorhabdus luminescens TTO1)

1e-27

• Sequence Alignments

1) phfS in NC_012962


> AF346500|4|G4|27479643|AAO17170.1|Photorhabdus_luminescens_W14|+|3949..4473|phfS|-|PhfS
Length=174

 Score =  124 bits (452),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 73/179 (41%), Positives = 125/179 (70%), Gaps = 9/179 (5%)

Query  1    MKKNFILASLVMILGTFSSFSALSYDGKIQFTGKIIENGCTVAAGAKGKEVEVNFGSLLK  60
            MKKNFILASLV +LG FSSFSALSYDG I+F G IIE+ CTV  G+ GK++ VNF+++ K
Sbjct  1    MKKNFILASLVAVLGIFSSFSALSYDGTIKFRGTIIEQTCTV-KGTSGKDIAVNFDNVHK  59

Query  61   STFGPDKNTVGVSKGFSISLTTCPRAEALGISFDGEPDANN----KAVYSSGVTGVGIQI  116
            S ++      + +K+F+++LT CP   ++++ FD+   +++    K + SS    ++I +
Sbjct  60   SKLDGKAGKFSDPKSFTVNLTGCPDLKGFDVKFDDTDKTSDGNYFKILSSSTAKNIAIAL  119

Query  117  FREDGTTEIKPGEYATRVATVGAPNGNTDMQFIAKLISTNTNIATGNINKPINFTIIYP  175
            ++ +++T IKPG+ + +++ V+   G+T  ++ +KL+ST + +++G++ + INFTI YP
Sbjct  120  YKSGSSTPIKPGD-SIKIPGVA---GDTSFNLESKLVSTAATVTAGSFTRDINFTISYP  174

2) phfS in NC_005126


> AF346500|4|G4|27479643|AAO17170.1|Photorhabdus_luminescens_W14|+|3949..4473|phfS|-|PhfS
Length=174

 Score =  115 bits (421),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 75/176 (43%), Positives = 124/176 (71%), Gaps = 9/176 (5%)

Query  1    MKKNFILASLVTVLAVFSSFSALSYDGTIKFRGTIINEGCTI---TTKDVAVDFGKLSKN  57
            MKKNFILASLV+VL++FSSFSALSYDGTIKFRGTII++ CT+   + KD+AV+F+++ K+
Sbjct  1    MKKNFILASLVAVLGIFSSFSALSYDGTIKFRGTIIEQTCTVKGTSGKDIAVNFDNVHKS  60

Query  58   AFGGKANIVGISKDFSISLTSCDVTGALGISFDGGPDADNKNVY----SSGLAGVGIQIL  113
             ++GKA   + +K F+++LT+C    ++++ FD+   + + N +    SS    ++I + 
Sbjct  61   KLDGKAGKFSDPKSFTVNLTGCPDLKGFDVKFDDTDKTSDGNYFKILSSSTAKNIAIALY  120

Query  114  KGSDGNNIAPGTNVPGIATIASNTATMNFRAGLISTKNNVSIGSIDKTFNFTIIYP  169
            K++ +  I PG ++  I+ +A++T + N+ + L+ST   V+ GS+ + +NFTI YP
Sbjct  121  KSGSSTPIKPGDSIK-IPGVAGDT-SFNLESKLVSTAATVTAGSFTRDINFTISYP  174