> AF306796|4|G3|11139680|AAG31793.1|Vibrio_cholerae_SCE226|+|2482..3315|tcpN|-|toxin
co-regulated pilus virulence regulatory
protein
Length=277
Score = 353 bits (1325), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 217/275 (79%), Positives = 250/275 (91%), Gaps = 0/275 (0%)
Query 1 MIGKKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNCLVSYEinsssiil 60
+ K SF NVY + KF+TY FN+++I+DYK+FWI+ G AKL+DKNCLV+Y I +S++L
Sbjct 2 ITNKTSFLVNVYELRKFETYAFNKVFIDDYKIFWINKGSAKLVDKNCLVNYTITENSVVL 61
Query 61 lkknsiQRFSLTSLSDENINVSVITISDSFIRSLKSYILGDLMIRNLYSENKDLLLWNCE 120
LKKNSIQRFSL SLSDE+I+V V+TI + F+ SL+ Y+ GDLMIRNLY+E+KDLLLWNCE
Sbjct 62 LKKNSIQRFSLMSLSDESISVCVLTIKNKFVNSLRHYLQGDLMIRNLYNEKKDLLLWNCE 121
Query 121 HNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKS 180
NDI+VL+E+V+ + + +YS++FLK+FFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKS
Sbjct 122 LNDISVLGEIVSTYDQTQYSEDFLKIFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKS 181
Query 181 DITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIA 240
DITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIA
Sbjct 182 DITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIA 241
Query 241 YQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGVAE 275
Y SGFASVSYFSTVFKSTMNVAPSEYLFMLTGVAE
Sbjct 242 YLSGFASVSYFSTVFKSTMNVAPSEYLFMLTGVAE 276 |