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Homologs of unnamed gene of AF200692

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) traF
( YP_002399382.1 )

putative plasmid transfer protein

NC_011745
(Escherichia coli ED1a)

2e-140

2) ECOPMV1_pHUSEC411like00092
( YP_008574644.1 )

hypothetical protein

NC_022371
(Escherichia coli PMV-1)

3e-129

3) SFxv_3249
( YP_005728587.1 )

hypothetical protein

NC_017328
(Shigella flexneri 2002017)

6e-119

4) SbBS512_E4649
( YP_001882814.1 )

hypothetical protein

NC_010658
(Shigella boydii CDC 3083-94)

7e-117

5) S4823
( NP_838461.1 )

hypothetical protein

NC_004741
(Shigella flexneri 2457T)

1e-113

100

6) SF2967
( NP_708741.2 )

hypothetical protein

NC_004337
(Shigella flexneri 301)

1e-113

100

7) O3M_22905
( YP_006772192.1 )

hypothetical protein

NC_018650
(Escherichia coli 2009EL-2050)

2e-113

8) O3O_02380
( YP_006786381.1 )

hypothetical protein

NC_018661
(Escherichia coli 2009EL-2071)

2e-113

9) O3K_23000
( YP_006781254.1 )

hypothetical protein

NC_018658
(Escherichia coli 2011C-3493)

2e-113

10) SSON53_18275
( YP_005458159.1 )

putative plasmid transfer protein

NC_016822
(Shigella sonnei 53G)

2e-111

11) SSON_3224
( YP_312040.2 )

hypothetical protein

NC_007384
(Shigella sonnei Ss046)

2e-111

12) SBO_0232
( YP_406776.2 )

hypothetical protein

NC_007613
(Shigella boydii Sb227)

3e-111

13) SBO_4149
( YP_410404.2 )

hypothetical protein

NC_007613
(Shigella boydii Sb227)

3e-111

14) traF
( YP_006137018.1 )

IncI1 conjugal transfer protein TraF

NC_017642
(Escherichia coli UMNK88)

3e-109

15) SeHA_A0106
( YP_002043941.1 )

TraF

NC_011081
(Salmonella enterica SL476)

3e-109

16) EKO11_4725
( YP_005280343.1 )

protein TraF

NC_016904
(Escherichia coli KO11FL)

4e-109

17) SEEH1578_00635
( YP_008248863.1 )

TraF protein

NC_021811
(Salmonella enterica 41578)

4e-109

18) CFSAN002069_23590
( YP_008253421.1 )

conjugal transfer protein TraF

NC_021813
(Salmonella enterica CFSAN002069)

4e-109

19) traF
( YP_006203600.1 )

conjugal transfer protein

NC_017718
(Salmonella enterica SL1344)

4e-109

20) traF
( YP_006200928.1 )

TraF protein

NC_017675
(Salmonella enterica ST4/74)

4e-109

21) O3K_25652
( YP_006781728.1 )

F pilus assembly

NC_018659
(Escherichia coli 2011C-3493)

5e-109

22) traF
( YP_006127335.1 )

thick pilus signal peptide

NC_017637
(Escherichia coli W)

5e-109

23) WFL_23630
( YP_006176104.1 )

conjugational transfer protein TraF

NC_017665
(Escherichia coli W)

5e-109

24) ECSE_P1-0105
( YP_002296130.1 )

TraF protein

NC_011419
(Escherichia coli SE11)

7e-109

25) ECL_00526
( YP_003611041.1 )

hypothetical protein

NC_014121
(Enterobacter cloacae ATCC 13047)

3e-94

26) SPAB_05445
( YP_001591550.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

1e-91

27) Pecwa_0705
( YP_003258133.1 )

plasmid transfer protein

NC_013421
(Pectobacterium wasabiae WPP163)

4e-76

28) W5S_3427
( YP_006284369.1 )

TraF like protein

NC_017845
(Pectobacterium sp. SCC3193)

2e-75

29) traF
( YP_048665.1 )

plasmid transfer protein

NC_004547
(Pectobacterium atrosepticum SCRI1043)

6e-69

30) Ser39006_1546
( YP_008521928.1 )

hypothetical protein

NC_022268
(Serratia sp. ATCC 39006)

2e-68

31) PAJ_2535
( YP_005935411.1 )

putative plasmid transfer protein

NC_017531
(Pantoea ananatis AJ13355)

2e-65

32) PAGR_g3788
( YP_005994497.1 )

conjugal transfer protein TraF

NC_017554
(Pantoea ananatis PA13)

9e-65

33) traF1
( YP_005197347.1 )

type IV pilus protein, TraF

NC_016816
(Pantoea ananatis LMG 5342)

1e-64

34) traF
( YP_003739703.1 )

plasmid transfer protein TraF

NC_014306
(Erwinia billingiae Eb661)

1e-62

35) traF
( YP_001909012.1 )

plasmid transfer protein TraF

NC_010694
(Erwinia tasmaniensis Et1/99)

3e-60

36) traF
( YP_005804325.1 )

hypothetical protein

NC_017390
(Erwinia pyrifoliae DSM 12163)

1e-58

37) traF
( YP_002650299.1 )

plasmid transfer protein

NC_012214
(Erwinia pyrifoliae Ep1/96)

1e-58

38) Pat9b_0295
( YP_004114177.1 )

putative plasmid transfer protein TraF

NC_014837
(Pantoea sp. At-9b)

1e-58

39) Dd586_0867
( YP_003332460.1 )

putative plasmid transfer protein

NC_013592
(Dickeya dadantii Ech586)

7e-59

40) traF
( YP_003537369.1 )

plasmid transfer protein

NC_013971
(Erwinia amylovora ATCC 49946)

6e-58

41) traF
( YP_003532675.1 )

hypothetical protein

NC_013961
(Erwinia amylovora CFBP1430)

6e-58

42) traF
( YP_005817375.1 )

Putative plasmid transfer protein

NC_017445
(Erwinia sp. Ejp617)

2e-57

43) Dda3937_01475
( YP_003881754.1 )

IncI1 plasmid conjugative transfer protein TraF

NC_014500
(Dickeya dadantii 3937)

1e-54

44) traF
( YP_003933086.1 )

hypothetical protein

NC_014562
(Pantoea vagans C9-1)

7e-52

• Sequence Alignments

1) traF in NC_011745


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  491 bits (1852),  Expect = 2e-140, Method: Compositional matrix adjust.
 Identities = 322/333 (97%), Positives = 331/333 (99%), Gaps = 0/333 (0%)

Query  84   LLLPSVGAQLSDPDNITDNADRISDDWKAFDRAIDSNHGVPEAAARLKERLRDFRHTHaa  143
            +LLPSVGAQLS+PDNITDNADRISD+WKAFDRAI+SNHGVPEAAARLKE+LRDFR+THAA
Sbjct  1    MLLPSVGAQLSNPDNITDNADRISDEWKAFDRAIESNHGVPEAAARLKEHLRDFRNTHAA  60

Query  144  aqlgvsavaalPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTS  203
            AQLGVSAVAALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTS
Sbjct  61   AQLGVSAVAALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTS  120

Query  204  QAFARAALITDVGIALATELETAGQKWSLGFTPKFQRVDLFNYNVLVRNYDSSAFKGDRY  263
            QA AR+ALITDVGIALATELETAGQKWSLGF PKFQRVDLFNYNVLVRNYDSSAFKGDRY
Sbjct  121  QACARTALITDVGIALATELETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRY  180

Query  264  HNTKNGINADIGASTDLDDNWTLGLVAQNLIPRSIETKEVNGITETFRIRPQVTAGVSWH  323
            HNTKNGINADIGASTDLDDNWTLGLVAQNLI+RSIETKEVNGITETFRIRPQVTAGVSWH
Sbjct  181  HNTKNGINADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWH  240

Query  324  NAMFTTAFDVDLTPASGFTSDSNRQFAAIGAEFNAWKWAQLRAGYRQNLAGNDGSAFTAG  383
            NAMFTTAFDVDLTPASGFTSDSNRQFAAIG+EFNAWKWAQLRAGYRQNLAGNDGSAFTAG
Sbjct  241  NAMFTTAFDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAG  300

Query  384  VGISPFDVVHLDVAGLIGTDNTYGAVAQFQFTF  416
            VGISPFDVVHLDVAGLIGTDNTYGAVAQFQFTF
Sbjct  301  VGISPFDVVHLDVAGLIGTDNTYGAVAQFQFTF  333

2) ECOPMV1_pHUSEC411like00092 in NC_022371


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  454 bits (1712),  Expect = 3e-129, Method: Compositional matrix adjust.
 Identities = 275/333 (83%), Positives = 320/333 (97%), Gaps = 0/333 (0%)

Query  68   LLLPSVGAQLSDPGNIADNADKISDDWKAFDRAVDSHSGVPQTAARLKERLQDFRNTHas  127
            +LLPSVGAQLS+P+NI+DNAD+ISD+WKAFDRA++S+ GVP++AARLKE+L+DFRNTHA+
Sbjct  1    MLLPSVGAQLSNPDNITDNADRISDEWKAFDRAIESNHGVPEAAARLKEHLRDFRNTHAA  60

Query  128  aqagvsavaaLPGDTLAAALMLKTLGTVSVDGKVSDADLNYLESIADSGSQDVDKNRLTS  187
            AQ GVSAVAALPGD L+AALM+K+ GTVSVDGKVSDADL YLE +A+S +Q+VDK+RLTS
Sbjct  61   AQLGVSAVAALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTS  120

Query  188  QAFARAALITDVGVALATELETAGQKWSLGFTPKFQRVDLFNYNTLIKNYDSSAFKGDRY  247
            QA AR+ALITDVG+ALATELETAGQKWSLGF PKFQRVDLFNYN L++NYDSSAFKGDRY
Sbjct  121  QACARTALITDVGIALATELETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRY  180

Query  248  HNTQNGINADIGASMDLDDNWTLGLVAQNLIPRSIETKEVHGVTETFRIRPQVTTGVSWH  307
            HNT+NGINADIGAS DLDDNWTLGLVAQNLI+RSIETKEV+G+TETFRIRPQVT+GVSWH
Sbjct  181  HNTKNGINADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWH  240

Query  308  NDMFTTALDVDLTPASGFTSDSKRQFAAVGAEFNAWKWAQLRTGYRQNLASNNGSAFTAG  367
            N MFTTA+DVDLTPASGFTSDS+RQFAA+G+EFNAWKWAQLR+GYRQNLA+N+GSAFTAG
Sbjct  241  NAMFTTAFDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAG  300

Query  368  IGLSPFDVIHIDVAGLVGTDNNYGAIAQLQFTF  400
            +G+SPFDV+H+DVAGL+GTDN YGA+AQ+QFTF
Sbjct  301  VGISPFDVVHLDVAGLIGTDNTYGAVAQFQFTF  333

3) SFxv_3249 in NC_017328


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  419 bits (1577),  Expect = 6e-119, Method: Compositional matrix adjust.
 Identities = 265/266 (99%), Positives = 266/266 (100%), Gaps = 0/266 (0%)

Query  1    MAALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQACARTA  60
            +AALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQACARTA
Sbjct  68   VAALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQACARTA  127

Query  61   LITDVGIALATELETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGI  120
            LITDVGIALATELETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGI
Sbjct  128  LITDVGIALATELETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGI  187

Query  121  NADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTA  180
            NADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTA
Sbjct  188  NADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTA  247

Query  181  FDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFD  240
            FDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFD
Sbjct  248  FDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFD  307

Query  241  VVHLDVAGLIGTDNTYGAVAQFQFTF  266
            VVHLDVAGLIGTDNTYGAVAQFQFTF
Sbjct  308  VVHLDVAGLIGTDNTYGAVAQFQFTF  333

4) SbBS512_E4649 in NC_010658


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  412 bits (1551),  Expect = 7e-117, Method: Compositional matrix adjust.
 Identities = 261/266 (99%), Positives = 265/266 (99%), Gaps = 0/266 (0%)

Query  1    MAALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQAFARAA  60
            +AALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQA AR+A
Sbjct  68   VAALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQACARTA  127

Query  61   LITDVGIALATELETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGI  120
            LITDVGIALATELETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGI
Sbjct  128  LITDVGIALATELETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGI  187

Query  121  NADIGASTDLDDNWTLGLVAQNLIPRSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTA  180
            NADIGASTDLDDNWTLGLVAQNLI+RSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTA
Sbjct  188  NADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTA  247

Query  181  FDVDLTPASGFTSDSNRQFAAIGAEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFD  240
            FDVDLTPASGFTSDSNRQFAAIG+EFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFD
Sbjct  248  FDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFD  307

Query  241  VVHLDVAGLIGTDNTYGAVAQFQFTF  266
            VVHLDVAGLIGTDNTYGAVAQFQFTF
Sbjct  308  VVHLDVAGLIGTDNTYGAVAQFQFTF  333

5) S4823 in NC_004741


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  401 bits (1509),  Expect = 1e-113, Method: Compositional matrix adjust.
 Identities = 253/253 (100%), Positives = 253/253 (100%), Gaps = 0/253 (0%)

Query  1    MVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQACARTALITDVGIALATEL  60
            MVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQACARTALITDVGIALATEL
Sbjct  81   MVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQACARTALITDVGIALATEL  140

Query  61   ETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDN  120
            ETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDN
Sbjct  141  ETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDN  200

Query  121  WTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTS  180
            WTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTS
Sbjct  201  WTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTS  260

Query  181  DSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTD  240
            DSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTD
Sbjct  261  DSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTD  320

Query  241  NTYGAVAQFQFTF  253
            NTYGAVAQFQFTF
Sbjct  321  NTYGAVAQFQFTF  333

6) SF2967 in NC_004337


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  401 bits (1509),  Expect = 1e-113, Method: Compositional matrix adjust.
 Identities = 253/253 (100%), Positives = 253/253 (100%), Gaps = 0/253 (0%)

Query  1    MVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQACARTALITDVGIALATEL  60
            MVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQACARTALITDVGIALATEL
Sbjct  81   MVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQACARTALITDVGIALATEL  140

Query  61   ETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDN  120
            ETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDN
Sbjct  141  ETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDN  200

Query  121  WTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTS  180
            WTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTS
Sbjct  201  WTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTS  260

Query  181  DSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTD  240
            DSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTD
Sbjct  261  DSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTD  320

Query  241  NTYGAVAQFQFTF  253
            NTYGAVAQFQFTF
Sbjct  321  NTYGAVAQFQFTF  333

7) O3M_22905 in NC_018650


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  400 bits (1506),  Expect = 2e-113, Method: Compositional matrix adjust.
 Identities = 252/253 (99%), Positives = 253/253 (100%), Gaps = 0/253 (0%)

Query  1    MVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQACARTALITDVGIALATEL  60
            MVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQACARTALITDVGIALATEL
Sbjct  81   MVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQACARTALITDVGIALATEL  140

Query  61   ETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDN  120
            ETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDN
Sbjct  141  ETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDN  200

Query  121  WTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTS  180
            WTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTS
Sbjct  201  WTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTS  260

Query  181  DSNRQFAAIGAEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTD  240
            DSNRQFAAIG+EFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTD
Sbjct  261  DSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTD  320

Query  241  NTYGAVAQFQFTF  253
            NTYGAVAQFQFTF
Sbjct  321  NTYGAVAQFQFTF  333

8) O3O_02380 in NC_018661


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  400 bits (1506),  Expect = 2e-113, Method: Compositional matrix adjust.
 Identities = 252/253 (99%), Positives = 253/253 (100%), Gaps = 0/253 (0%)

Query  1    MVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQACARTALITDVGIALATEL  60
            MVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQACARTALITDVGIALATEL
Sbjct  81   MVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQACARTALITDVGIALATEL  140

Query  61   ETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDN  120
            ETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDN
Sbjct  141  ETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDN  200

Query  121  WTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTS  180
            WTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTS
Sbjct  201  WTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTS  260

Query  181  DSNRQFAAIGAEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTD  240
            DSNRQFAAIG+EFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTD
Sbjct  261  DSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTD  320

Query  241  NTYGAVAQFQFTF  253
            NTYGAVAQFQFTF
Sbjct  321  NTYGAVAQFQFTF  333

9) O3K_23000 in NC_018658


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  400 bits (1506),  Expect = 2e-113, Method: Compositional matrix adjust.
 Identities = 252/253 (99%), Positives = 253/253 (100%), Gaps = 0/253 (0%)

Query  1    MVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQACARTALITDVGIALATEL  60
            MVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQACARTALITDVGIALATEL
Sbjct  81   MVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQACARTALITDVGIALATEL  140

Query  61   ETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDN  120
            ETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDN
Sbjct  141  ETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDN  200

Query  121  WTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTS  180
            WTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTS
Sbjct  201  WTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTS  260

Query  181  DSNRQFAAIGAEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTD  240
            DSNRQFAAIG+EFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTD
Sbjct  261  DSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTD  320

Query  241  NTYGAVAQFQFTF  253
            NTYGAVAQFQFTF
Sbjct  321  NTYGAVAQFQFTF  333

10) SSON53_18275 in NC_016822


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  394 bits (1482),  Expect = 2e-111, Method: Compositional matrix adjust.
 Identities = 249/253 (99%), Positives = 252/253 (99%), Gaps = 0/253 (0%)

Query  1    MVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQAFARAALITDVGIALATEL  60
            MVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQA AR+ALITDVGIALATEL
Sbjct  81   MVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQACARTALITDVGIALATEL  140

Query  61   ETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDN  120
            ETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDN
Sbjct  141  ETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDN  200

Query  121  WTLGLVAQNLIPRSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTS  180
            WTLGLVAQNLI+RSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTS
Sbjct  201  WTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTS  260

Query  181  DSNRQFAAIGAEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTD  240
            DSNRQFAAIG+EFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTD
Sbjct  261  DSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTD  320

Query  241  NTYGAVAQFQFTF  253
            NTYGAVAQFQFTF
Sbjct  321  NTYGAVAQFQFTF  333

11) SSON_3224 in NC_007384


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  394 bits (1482),  Expect = 2e-111, Method: Compositional matrix adjust.
 Identities = 249/253 (99%), Positives = 252/253 (99%), Gaps = 0/253 (0%)

Query  1    MVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQAFARAALITDVGIALATEL  60
            MVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQA AR+ALITDVGIALATEL
Sbjct  81   MVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQACARTALITDVGIALATEL  140

Query  61   ETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDN  120
            ETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDN
Sbjct  141  ETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDN  200

Query  121  WTLGLVAQNLIPRSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTS  180
            WTLGLVAQNLI+RSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTS
Sbjct  201  WTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTS  260

Query  181  DSNRQFAAIGAEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTD  240
            DSNRQFAAIG+EFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTD
Sbjct  261  DSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTD  320

Query  241  NTYGAVAQFQFTF  253
            NTYGAVAQFQFTF
Sbjct  321  NTYGAVAQFQFTF  333

12) SBO_0232 in NC_007613


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  393 bits (1480),  Expect = 3e-111, Method: Compositional matrix adjust.
 Identities = 248/253 (99%), Positives = 252/253 (99%), Gaps = 0/253 (0%)

Query  1    MVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQAFARAALITDVGIALATEL  60
            MVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQA AR+ALITDVGIALATEL
Sbjct  81   MVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQACARTALITDVGIALATEL  140

Query  61   ETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTNLDDN  120
            ETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGAST+LDDN
Sbjct  141  ETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDN  200

Query  121  WTLGLVAQNLIPRSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTS  180
            WTLGLVAQNLI+RSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTS
Sbjct  201  WTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTS  260

Query  181  DSNRQFAAIGAEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTD  240
            DSNRQFAAIG+EFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTD
Sbjct  261  DSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTD  320

Query  241  NTYGAVAQFQFTF  253
            NTYGAVAQFQFTF
Sbjct  321  NTYGAVAQFQFTF  333

13) SBO_4149 in NC_007613


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  393 bits (1480),  Expect = 3e-111, Method: Compositional matrix adjust.
 Identities = 248/253 (99%), Positives = 252/253 (99%), Gaps = 0/253 (0%)

Query  1    MVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQAFARAALITDVGIALATEL  60
            MVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQA AR+ALITDVGIALATEL
Sbjct  81   MVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQACARTALITDVGIALATEL  140

Query  61   ETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTNLDDN  120
            ETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGAST+LDDN
Sbjct  141  ETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDN  200

Query  121  WTLGLVAQNLIPRSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTS  180
            WTLGLVAQNLI+RSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTS
Sbjct  201  WTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTS  260

Query  181  DSNRQFAAIGAEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTD  240
            DSNRQFAAIG+EFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTD
Sbjct  261  DSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTD  320

Query  241  NTYGAVAQFQFTF  253
            NTYGAVAQFQFTF
Sbjct  321  NTYGAVAQFQFTF  333

14) traF in NC_017642


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  388 bits (1458),  Expect = 3e-109, Method: Compositional matrix adjust.
 Identities = 236/333 (71%), Positives = 299/333 (90%), Gaps = 0/333 (0%)

Query  68   LLLPSVGAQVADPDDVSNKADDVKDDWDLFDSAVDNQHGVQQAAANLKHRLQEFRNINAD  127
            +LLPSVGAQ+++PD+++++AD + D+W  FD A++++HGV +AAA LK++L++FRN +A 
Sbjct  1    MLLPSVGAQLSNPDNITDNADRISDEWKAFDRAIESNHGVPEAAARLKEHLRDFRNTHAA  60

Query  128  AQVGVSAVAAMANDTLPFALMVKSYGTVSVNGKVNDADLDYLDKVANGTITDVDKNALTS  187
            AQ+GVSAVAA++ D L+ ALMVKS GTVSV+GKV+DADL YL+ VAN+T  +VDK+ LTS
Sbjct  61   AQLGVSAVAALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTS  120

Query  188  RAFGRAAVITDVGISFAKELETAGQKWSLGVTPKYQRVDLFNYNVTVRdydkddfdgdky  247
            +A +R+A+ITDVGI++A ELETAGQKWSLG  PK+QRVDLFNYNV VR+YD   F GD+Y
Sbjct  121  QACARTALITDVGIALATELETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRY  180

Query  248  HNTKNGFNADIGAYTDLNDNWTVGLVAQNIIPRSIDTKVVNGFKETFKVRPQATAGVSWH  307
            HNTKNG+NADIGA TDL+DNWT+GLVAQN+I+RSI+TK VNG+ ETF++RPQ TAGVSWH
Sbjct  181  HNTKNGINADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWH  240

Query  308  NDLFTTALDVDLTPASGFTSDSKRQFASVGAEFNAWKWAQLRAGYRQNMASNSGSAFTAG  367
            N +FTTA+DVDLTPASGFTSDS+RQFA++G+EFNAWKWAQLRAGYRQN+A+N GSAFTAG
Sbjct  241  NAMFTTAFDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAG  300

Query  368  VGISPFDVVHIDVSGLVGTDHDYGAMAQLQFTF  400
            VGISPFDVVH+DV+GL+GTD+ YGA+AQ+QFTF
Sbjct  301  VGISPFDVVHLDVAGLIGTDNTYGAVAQFQFTF  333

15) SeHA_A0106 in NC_011081


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  388 bits (1458),  Expect = 3e-109, Method: Compositional matrix adjust.
 Identities = 236/333 (71%), Positives = 299/333 (90%), Gaps = 0/333 (0%)

Query  68   LLLPSVGAQVADPDDVSNKADDVKDDWDLFDSAVDNQHGVQQAAANLKHRLQEFRNINAD  127
            +LLPSVGAQ+++PD+++++AD + D+W  FD A++++HGV +AAA LK++L++FRN +A 
Sbjct  1    MLLPSVGAQLSNPDNITDNADRISDEWKAFDRAIESNHGVPEAAARLKEHLRDFRNTHAA  60

Query  128  AQVGVSAVAAMANDTLPFALMVKSYGTVSVNGKVNDADLDYLDKVANGTITDVDKNALTS  187
            AQ+GVSAVAA++ D L+ ALMVKS GTVSV+GKV+DADL YL+ VAN+T  +VDK+ LTS
Sbjct  61   AQLGVSAVAALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTS  120

Query  188  RAFGRAAVITDVGISFAKELETAGQKWSLGVTPKYQRVDLFNYNVTVRdydkddfdgdky  247
            +A +R+A+ITDVGI++A ELETAGQKWSLG  PK+QRVDLFNYNV VR+YD   F GD+Y
Sbjct  121  QACARTALITDVGIALATELETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRY  180

Query  248  HNTKNGFNADIGAYTDLNDNWTVGLVAQNIIPRSIDTKVVNGFKETFKVRPQATAGVSWH  307
            HNTKNG+NADIGA TDL+DNWT+GLVAQN+I+RSI+TK VNG+ ETF++RPQ TAGVSWH
Sbjct  181  HNTKNGINADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWH  240

Query  308  NDLFTTALDVDLTPASGFTSDSKRQFASVGAEFNAWKWAQLRAGYRQNMASNSGSAFTAG  367
            N +FTTA+DVDLTPASGFTSDS+RQFA++G+EFNAWKWAQLRAGYRQN+A+N GSAFTAG
Sbjct  241  NAMFTTAFDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAG  300

Query  368  VGISPFDVVHIDVSGLVGTDHDYGAMAQLQFTF  400
            VGISPFDVVH+DV+GL+GTD+ YGA+AQ+QFTF
Sbjct  301  VGISPFDVVHLDVAGLIGTDNTYGAVAQFQFTF  333

16) EKO11_4725 in NC_016904


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  387 bits (1456),  Expect = 4e-109, Method: Compositional matrix adjust.
 Identities = 235/333 (71%), Positives = 299/333 (90%), Gaps = 0/333 (0%)

Query  67   LLLPSVGAQVADPDDVSNKADDVKDDWDLFDSAVDNQHGVQQAAANLKHRLQEFRNINAD  126
            +LLPSVGAQ+++PD+++++AD + D+W  FD A++++HGV +AAA LK++L++FRN +A 
Sbjct  1    MLLPSVGAQLSNPDNITDNADRISDEWKAFDRAIESNHGVPEAAARLKEHLRDFRNTHAA  60

Query  127  AQVGVSAVAAMANDTLPFALMVKSYGTVSVNGKVNDADLDYLDKVANGTITDVDKNALTS  186
            AQ+GVSAVAA++ D L+ ALMVKS GTVSV+GKV+DADL YL+ VAN+T  +VDK+ LTS
Sbjct  61   AQLGVSAVAALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTS  120

Query  187  RAFGRAAVITDVGISFAKELETAGQKWSLGVTPKYQRVDLFNYNVKVRdydkddfdgdky  246
            +A +R+A+ITDVGI++A ELETAGQKWSLG  PK+QRVDLFNYNV VR+YD   F GD+Y
Sbjct  121  QACARTALITDVGIALATELETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRY  180

Query  247  HNTKNGFNADIGAYTDLNDNWTVGLVAQNIIPRSIDTKVVNGFKETFKVRPQATAGVSWH  306
            HNTKNG+NADIGA TDL+DNWT+GLVAQN+I+RSI+TK VNG+ ETF++RPQ TAGVSWH
Sbjct  181  HNTKNGINADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWH  240

Query  307  NDLFTTALDIDLTPASGFTSDSKRQFASVGAEFNAWKWAQLRAGYRQNMASNSGSAFTAG  366
            N +FTTA+D+DLTPASGFTSDS+RQFA++G+EFNAWKWAQLRAGYRQN+A+N GSAFTAG
Sbjct  241  NAMFTTAFDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAG  300

Query  367  VGISPFDVVHIDVSGLVGTDHDYGAMAQLQFTF  399
            VGISPFDVVH+DV+GL+GTD+ YGA+AQ+QFTF
Sbjct  301  VGISPFDVVHLDVAGLIGTDNTYGAVAQFQFTF  333

17) SEEH1578_00635 in NC_021811


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  387 bits (1457),  Expect = 4e-109, Method: Compositional matrix adjust.
 Identities = 235/333 (71%), Positives = 299/333 (90%), Gaps = 0/333 (0%)

Query  68   LLLPSVGAQVADPDDVSNKADDVKDDWDLFDSAVDNQHGVQQAAANLKHRLQEFRNINAD  127
            +LLPSVGAQ+++PD+++++AD + D+W  FD A++++HGV +AAA LK++L++FRN +A 
Sbjct  1    MLLPSVGAQLSNPDNITDNADRISDEWKAFDRAIESNHGVPEAAARLKEHLRDFRNTHAA  60

Query  128  AQVGVSAVAAMANDTLPFALMVKSYGTVSVNGKVNDADLDYLDKVANGTITDVDKNALTS  187
            AQ+GVSAVAA++ D L+ ALMVKS GTVSV+GKV+DADL YL+ VAN+T  +VDK+ LTS
Sbjct  61   AQLGVSAVAALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTS  120

Query  188  RAFGRAAVITDVGISFAKELETAGQKWSLGVTPKYQRVDLFNYNVTVRdydkddfdgdky  247
            +A +R+A+ITDVGI++A ELETAGQKWSLG  PK+QRVDLFNYNV VR+YD   F GD+Y
Sbjct  121  QACARTALITDVGIALATELETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRY  180

Query  248  HNTKNGFNADIGAYTDLNDNWTVGLVAQNIIPRSIDTKVVNGFKETFKVRPQATAGVSWH  307
            HNTKNG+NADIGA TDL+DNWT+GLVAQN+I+RSI+TK VNG+ ETF++RPQ TAGVSWH
Sbjct  181  HNTKNGINADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWH  240

Query  308  NDLFTTALDIDLTPASGFTSDSKRQFASVGAEFNAWKWAQLRAGYRQNMASNSGSAFTAG  367
            N +FTTA+D+DLTPASGFTSDS+RQFA++G+EFNAWKWAQLRAGYRQN+A+N GSAFTAG
Sbjct  241  NAMFTTAFDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAG  300

Query  368  VGISPFDVVHIDVSGLVGTDHDYGAMAQLQFTF  400
            VGISPFDVVH+DV+GL+GTD+ YGA+AQ+QFTF
Sbjct  301  VGISPFDVVHLDVAGLIGTDNTYGAVAQFQFTF  333

18) CFSAN002069_23590 in NC_021813


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  387 bits (1457),  Expect = 4e-109, Method: Compositional matrix adjust.
 Identities = 235/333 (71%), Positives = 299/333 (90%), Gaps = 0/333 (0%)

Query  68   LLLPSVGAQVADPDDVSNKADDVKDDWDLFDSAVDNQHGVQQAAANLKHRLQEFRNINAD  127
            +LLPSVGAQ+++PD+++++AD + D+W  FD A++++HGV +AAA LK++L++FRN +A 
Sbjct  1    MLLPSVGAQLSNPDNITDNADRISDEWKAFDRAIESNHGVPEAAARLKEHLRDFRNTHAA  60

Query  128  AQVGVSAVAAMANDTLPFALMVKSYGTVSVNGKVNDADLDYLDKVANGTITDVDKNALTS  187
            AQ+GVSAVAA++ D L+ ALMVKS GTVSV+GKV+DADL YL+ VAN+T  +VDK+ LTS
Sbjct  61   AQLGVSAVAALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTS  120

Query  188  RAFGRAAVITDVGISFAKELETAGQKWSLGVTPKYQRVDLFNYNVTVRdydkddfdgdky  247
            +A +R+A+ITDVGI++A ELETAGQKWSLG  PK+QRVDLFNYNV VR+YD   F GD+Y
Sbjct  121  QACARTALITDVGIALATELETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRY  180

Query  248  HNTKNGFNADIGAYTDLNDNWTVGLVAQNIIPRSIDTKVVNGFKETFKVRPQATAGVSWH  307
            HNTKNG+NADIGA TDL+DNWT+GLVAQN+I+RSI+TK VNG+ ETF++RPQ TAGVSWH
Sbjct  181  HNTKNGINADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWH  240

Query  308  NDLFTTALDIDLTPASGFTSDSKRQFASVGAEFNAWKWAQLRAGYRQNMASNSGSAFTAG  367
            N +FTTA+D+DLTPASGFTSDS+RQFA++G+EFNAWKWAQLRAGYRQN+A+N GSAFTAG
Sbjct  241  NAMFTTAFDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAG  300

Query  368  VGISPFDVVHIDVSGLVGTDHDYGAMAQLQFTF  400
            VGISPFDVVH+DV+GL+GTD+ YGA+AQ+QFTF
Sbjct  301  VGISPFDVVHLDVAGLIGTDNTYGAVAQFQFTF  333

19) traF in NC_017718


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  387 bits (1457),  Expect = 4e-109, Method: Compositional matrix adjust.
 Identities = 235/333 (71%), Positives = 299/333 (90%), Gaps = 0/333 (0%)

Query  68   LLLPSVGAQVADPDDVSNKADDVKDDWDLFDSAVDNQHGVQQAAANLKHRLQEFRNINAD  127
            +LLPSVGAQ+++PD+++++AD + D+W  FD A++++HGV +AAA LK++L++FRN +A 
Sbjct  1    MLLPSVGAQLSNPDNITDNADRISDEWKAFDRAIESNHGVPEAAARLKEHLRDFRNTHAA  60

Query  128  AQVGVSAVAAMANDTLPFALMVKSYGTVSVNGKVNDADLDYLDKVANGTITDVDKNALTS  187
            AQ+GVSAVAA++ D L+ ALMVKS GTVSV+GKV+DADL YL+ VAN+T  +VDK+ LTS
Sbjct  61   AQLGVSAVAALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTS  120

Query  188  RAFGRAAVITDVGISFAKELETAGQKWSLGVTPKYQRVDLFNYNVTVRdydkddfdgdky  247
            +A +R+A+ITDVGI++A ELETAGQKWSLG  PK+QRVDLFNYNV VR+YD   F GD+Y
Sbjct  121  QACARTALITDVGIALATELETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRY  180

Query  248  HNTKNGFNADIGAYTDLNDNWTVGLVAQNIIPRSIDTKVVNGFKETFKVRPQATAGVSWH  307
            HNTKNG+NADIGA TDL+DNWT+GLVAQN+I+RSI+TK VNG+ ETF++RPQ TAGVSWH
Sbjct  181  HNTKNGINADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWH  240

Query  308  NDLFTTALDIDLTPASGFTSDSKRQFASVGAEFNAWKWAQLRAGYRQNMASNSGSAFTAG  367
            N +FTTA+D+DLTPASGFTSDS+RQFA++G+EFNAWKWAQLRAGYRQN+A+N GSAFTAG
Sbjct  241  NAMFTTAFDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAG  300

Query  368  VGISPFDVVHIDVSGLVGTDHDYGAMAQLQFTF  400
            VGISPFDVVH+DV+GL+GTD+ YGA+AQ+QFTF
Sbjct  301  VGISPFDVVHLDVAGLIGTDNTYGAVAQFQFTF  333

20) traF in NC_017675


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  387 bits (1457),  Expect = 4e-109, Method: Compositional matrix adjust.
 Identities = 235/333 (71%), Positives = 299/333 (90%), Gaps = 0/333 (0%)

Query  68   LLLPSVGAQVADPDDVSNKADDVKDDWDLFDSAVDNQHGVQQAAANLKHRLQEFRNINAD  127
            +LLPSVGAQ+++PD+++++AD + D+W  FD A++++HGV +AAA LK++L++FRN +A 
Sbjct  1    MLLPSVGAQLSNPDNITDNADRISDEWKAFDRAIESNHGVPEAAARLKEHLRDFRNTHAA  60

Query  128  AQVGVSAVAAMANDTLPFALMVKSYGTVSVNGKVNDADLDYLDKVANGTITDVDKNALTS  187
            AQ+GVSAVAA++ D L+ ALMVKS GTVSV+GKV+DADL YL+ VAN+T  +VDK+ LTS
Sbjct  61   AQLGVSAVAALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTS  120

Query  188  RAFGRAAVITDVGISFAKELETAGQKWSLGVTPKYQRVDLFNYNVTVRdydkddfdgdky  247
            +A +R+A+ITDVGI++A ELETAGQKWSLG  PK+QRVDLFNYNV VR+YD   F GD+Y
Sbjct  121  QACARTALITDVGIALATELETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRY  180

Query  248  HNTKNGFNADIGAYTDLNDNWTVGLVAQNIIPRSIDTKVVNGFKETFKVRPQATAGVSWH  307
            HNTKNG+NADIGA TDL+DNWT+GLVAQN+I+RSI+TK VNG+ ETF++RPQ TAGVSWH
Sbjct  181  HNTKNGINADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWH  240

Query  308  NDLFTTALDIDLTPASGFTSDSKRQFASVGAEFNAWKWAQLRAGYRQNMASNSGSAFTAG  367
            N +FTTA+D+DLTPASGFTSDS+RQFA++G+EFNAWKWAQLRAGYRQN+A+N GSAFTAG
Sbjct  241  NAMFTTAFDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAG  300

Query  368  VGISPFDVVHIDVSGLVGTDHDYGAMAQLQFTF  400
            VGISPFDVVH+DV+GL+GTD+ YGA+AQ+QFTF
Sbjct  301  VGISPFDVVHLDVAGLIGTDNTYGAVAQFQFTF  333

21) O3K_25652 in NC_018659


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  387 bits (1456),  Expect = 5e-109, Method: Compositional matrix adjust.
 Identities = 235/333 (71%), Positives = 299/333 (90%), Gaps = 0/333 (0%)

Query  68   LLLPSVGAQVADPNDVSNKADDVKDDWDLFDSAVDNQHGVQQAAANLKHRLQEFRNINAD  127
            +LLPSVGAQ+++P++++++AD + D+W  FD A++++HGV +AAA LK++L++FRN +A 
Sbjct  1    MLLPSVGAQLSNPDNITDNADRISDEWKAFDRAIESNHGVPEAAARLKEHLRDFRNTHAA  60

Query  128  AQVGVSAVAAMANDTLPFALMVKSYGTVSVNGKVNDADLDYLDKVANGTITDVDKNALTS  187
            AQ+GVSAVAA++ D L+ ALMVKS GTVSV+GKV+DADL YL+ VAN+T  +VDK+ LTS
Sbjct  61   AQLGVSAVAALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTS  120

Query  188  RAFGRAAVITDVGISFAKELETAGQKWSLGVTPKYQRVDLFNYNVTVRdydkddfdgdky  247
            +A +R+A+ITDVGI++A ELETAGQKWSLG  PK+QRVDLFNYNV VR+YD   F GD+Y
Sbjct  121  QACARTALITDVGIALATELETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRY  180

Query  248  HNTKNGFNADIGAYTDLNDNWTVGLVAQNIIPRSIDTKVVNGFKETFKVRPQATAGVSWH  307
            HNTKNG+NADIGA TDL+DNWT+GLVAQN+I+RSI+TK VNG+ ETF++RPQ TAGVSWH
Sbjct  181  HNTKNGINADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWH  240

Query  308  NDLFTTALDVDLTPASGFTSDSKRQFASVGAEFNAWKWAQLRAGYRQNMASNSGSAFTAG  367
            N +FTTA+DVDLTPASGFTSDS+RQFA++G+EFNAWKWAQLRAGYRQN+A+N GSAFTAG
Sbjct  241  NAMFTTAFDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAG  300

Query  368  VGISPFDVVHIDVSGLVGTDHDYGAMAQLQFTF  400
            VGISPFDVVH+DV+GL+GTD+ YGA+AQ+QFTF
Sbjct  301  VGISPFDVVHLDVAGLIGTDNTYGAVAQFQFTF  333

22) traF in NC_017637


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  387 bits (1455),  Expect = 5e-109, Method: Compositional matrix adjust.
 Identities = 235/333 (71%), Positives = 299/333 (90%), Gaps = 0/333 (0%)

Query  68   LLLPSVGAQVADPDDVSNKADDVKDDWDLFDSAVDNQHGVQQAAANLKHRLQEFRNINAD  127
            +LLPSVGAQ+++PD+++++AD + D+W  FD A++++HGV +AAA LK++L++FRN +A 
Sbjct  1    MLLPSVGAQLSNPDNITDNADRISDEWKAFDRAIESNHGVPEAAARLKEHLRDFRNTHAA  60

Query  128  AQVGVSAVAAMANDTLPFALMVKSYGTVSVNGKVNDADLDYLDKVANGTITDVDKNALTS  187
            AQ+GVSAVAA++ D L+ ALMVKS GTVSV+GKV+DADL YL+ VAN+T  +VDK+ LTS
Sbjct  61   AQLGVSAVAALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTS  120

Query  188  RAFGRAAVITDVGISFAKELETAGQKWSLGVTPKYQRVDLFNYNVKVRdydkddfdgdky  247
            +A +R+A+ITDVGI++A ELETAGQKWSLG  PK+QRVDLFNYNV VR+YD   F GD+Y
Sbjct  121  QACARTALITDVGIALATELETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRY  180

Query  248  HNTKNGFNADIGAYTDLNDNWTVGLVAQNIIPRSIDTKVVNGFKETFKVRPQATAGVSWH  307
            HNTKNG+NADIGA TDL+DNWT+GLVAQN+I+RSI+TK VNG+ ETF++RPQ TAGVSWH
Sbjct  181  HNTKNGINADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWH  240

Query  308  NDLFTTALDIDLTPASGFTSDSKRQFASVGAEFNAWKWAQLRAGYRQNMASNSGSAFTAG  367
            N +FTTA+D+DLTPASGFTSDS+RQFA++G+EFNAWKWAQLRAGYRQN+A+N GSAFTAG
Sbjct  241  NAMFTTAFDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAG  300

Query  368  VGISPFDVVHIDVSGLVGTDHDYGAMAQLQFTF  400
            VGISPFDVVH+DV+GL+GTD+ YGA+AQ+QFTF
Sbjct  301  VGISPFDVVHLDVAGLIGTDNTYGAVAQFQFTF  333

23) WFL_23630 in NC_017665


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  387 bits (1455),  Expect = 5e-109, Method: Compositional matrix adjust.
 Identities = 235/333 (71%), Positives = 299/333 (90%), Gaps = 0/333 (0%)

Query  68   LLLPSVGAQVADPDDVSNKADDVKDDWDLFDSAVDNQHGVQQAAANLKHRLQEFRNINAD  127
            +LLPSVGAQ+++PD+++++AD + D+W  FD A++++HGV +AAA LK++L++FRN +A 
Sbjct  1    MLLPSVGAQLSNPDNITDNADRISDEWKAFDRAIESNHGVPEAAARLKEHLRDFRNTHAA  60

Query  128  AQVGVSAVAAMANDTLPFALMVKSYGTVSVNGKVNDADLDYLDKVANGTITDVDKNALTS  187
            AQ+GVSAVAA++ D L+ ALMVKS GTVSV+GKV+DADL YL+ VAN+T  +VDK+ LTS
Sbjct  61   AQLGVSAVAALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTS  120

Query  188  RAFGRAAVITDVGISFAKELETAGQKWSLGVTPKYQRVDLFNYNVKVRdydkddfdgdky  247
            +A +R+A+ITDVGI++A ELETAGQKWSLG  PK+QRVDLFNYNV VR+YD   F GD+Y
Sbjct  121  QACARTALITDVGIALATELETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRY  180

Query  248  HNTKNGFNADIGAYTDLNDNWTVGLVAQNIIPRSIDTKVVNGFKETFKVRPQATAGVSWH  307
            HNTKNG+NADIGA TDL+DNWT+GLVAQN+I+RSI+TK VNG+ ETF++RPQ TAGVSWH
Sbjct  181  HNTKNGINADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWH  240

Query  308  NDLFTTALDIDLTPASGFTSDSKRQFASVGAEFNAWKWAQLRAGYRQNMASNSGSAFTAG  367
            N +FTTA+D+DLTPASGFTSDS+RQFA++G+EFNAWKWAQLRAGYRQN+A+N GSAFTAG
Sbjct  241  NAMFTTAFDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAG  300

Query  368  VGISPFDVVHIDVSGLVGTDHDYGAMAQLQFTF  400
            VGISPFDVVH+DV+GL+GTD+ YGA+AQ+QFTF
Sbjct  301  VGISPFDVVHLDVAGLIGTDNTYGAVAQFQFTF  333

24) ECSE_P1-0105 in NC_011419


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  386 bits (1453),  Expect = 7e-109, Method: Compositional matrix adjust.
 Identities = 235/333 (71%), Positives = 299/333 (90%), Gaps = 0/333 (0%)

Query  68   LLLPSVGAQVADPDDVSNKADDVKDDWDLFDSAVDNQHAVQQAAANLKHRLQEFRNINAD  127
            +LLPSVGAQ+++PD+++++AD + D+W  FD A++++H+V +AAA LK++L++FRN +A 
Sbjct  1    MLLPSVGAQLSNPDNITDNADRISDEWKAFDRAIESNHGVPEAAARLKEHLRDFRNTHAA  60

Query  128  AQVGVSAVAAMANDTLPFALMVKSYGTVSVNGKVNDADLDYLDKVANGTITDVDKNALTS  187
            AQ+GVSAVAA++ D L+ ALMVKS GTVSV+GKV+DADL YL+ VAN+T  +VDK+ LTS
Sbjct  61   AQLGVSAVAALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTS  120

Query  188  RAFGRAAVITDVGISFAKELETAGQKWSLGVTPKYQRVDLFNYNVTVRdydkddfdgdky  247
            +A +R+A+ITDVGI++A ELETAGQKWSLG  PK+QRVDLFNYNV VR+YD   F GD+Y
Sbjct  121  QACARTALITDVGIALATELETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRY  180

Query  248  HNTKNGFNADIGAYTDLNDNWTVGLVAQNIIPRSIDTKVVNGFKETFKVRPQATAGVSWH  307
            HNTKNG+NADIGA TDL+DNWT+GLVAQN+I+RSI+TK VNG+ ETF++RPQ TAGVSWH
Sbjct  181  HNTKNGINADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWH  240

Query  308  NDLFTTALDVDLTPASGFTSDSKRQFASVGAEFNAWKWAQLRAGYRQNMASNSGSAFTAG  367
            N +FTTA+DVDLTPASGFTSDS+RQFA++G+EFNAWKWAQLRAGYRQN+A+N GSAFTAG
Sbjct  241  NAMFTTAFDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAG  300

Query  368  VGISPFDVVHIDVSGLVGTDHDYGAMAQLQFTF  400
            VGISPFDVVH+DV+GL+GTD+ YGA+AQ+QFTF
Sbjct  301  VGISPFDVVHLDVAGLIGTDNTYGAVAQFQFTF  333

25) ECL_00526 in NC_014121


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  338 bits (1269),  Expect = 3e-94, Method: Compositional matrix adjust.
 Identities = 203/335 (61%), Positives = 274/335 (82%), Gaps = 2/335 (0%)

Query  64   LVLPSVGAQVSDPDNTVDKADDVKDLWDRFDAAADSQSGVSESAAALKNKLQDLKDTHAN  123
            ++LPSVGAQ+S+PDN  D+AD + D W  FD A +S+ GV+E+AA LK+ L+D+++THA 
Sbjct  1    MLLPSVGAQLSNPDNITDNADRISDEWKAFDRAIESNHGVPEAAARLKEHLRDFRNTHAA  60

Query  124  GQVGASVVATVPNQTLPFAVVVKSWGTVSVEGKVSDHDLDYLDKVADGDIPPSAVDKNSL  183
            +Q+G S VA++P + L+ A++VKS GTVSV+GKVSD DL YL+ VA++      VDK+ L
Sbjct  61   AQLGVSAVAALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVANS--TGQEVDKSRL  118

Query  184  TSKAYGRAAVITDVGVAMAHEFETAGQRWSLGITPKYQRIDLFNYNVSVRDFDKSDIHSG  243
            TS+A +R+A+ITDVG+A+A E+ETAGQ+WSLG+ PK+QR+DLFNYNV VR++D S + ++
Sbjct  119  TSQACARTALITDVGIALATELETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGD  178

Query  244  DYRNTKTGFNADLGLATDLTDNWTLGLAVLNVIPRSVETKPVNGSTGTFKVKPQATAGAA  303
             Y+NTK G+NAD+G +TDL DNWTLGL   N+I+RS+ETK VNG T TF+++PQ TAG +
Sbjct  179  RYHNTKNGINADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVS  238

Query  304  WHSGFITTALDVDLTEASRFDTDKKRQFASAGVELNAWSWMQVRAGYRQNIISNDGSAFT  363
            WH++ +TTA+DVDLT AS F +D +RQFA+ G E+NAW W Q+RAGYRQN+ +NDGSAFT
Sbjct  239  WHNAMFTTAFDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFT  298

Query  364  AGLGFSPFDVVHLDITGIAGTDRTYGAVAQMQFTF  398
            AG+G+SPFDVVHLD++G+ GTD TYGAVAQ QFTF
Sbjct  299  AGVGISPFDVVHLDVAGLIGTDNTYGAVAQFQFTF  333

26) SPAB_05445 in NC_010102


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  329 bits (1234),  Expect = 1e-91, Method: Compositional matrix adjust.
 Identities = 204/335 (61%), Positives = 277/335 (83%), Gaps = 2/335 (0%)

Query  33   LVLPSVGAQVSdpdktvdkaddvkdLWDRFDSAVANQSGVSESAAALKSKLQDLKNTHAN  92
            ++LPSVGAQ+S+PD+  D+AD + D W  FD A+ ++ GV+E+AA LK  L+D++NTHA 
Sbjct  1    MLLPSVGAQLSNPDNITDNADRISDEWKAFDRAIESNHGVPEAAARLKEHLRDFRNTHAA  60

Query  93   GQVGASVIATVPNQTLPFAVVVKSWGTVSVDGKVSDHDLEYLDKVADGTIPPSAVDTDSL  152
            +Q+G S +A++P + L+ A++VKS GTVSVDGKVSD DL YL+ VA++T     VD   L
Sbjct  61   AQLGVSAVAALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVANST--GQEVDKSRL  118

Query  153  TSRAYGRAAVITDVGVAMAHEFETAGHAWSFGITPKYQRVDLFNYNVSVSNFDKNDIDSS  212
            TS+A +R+A+ITDVG+A+A E+ETAG+ WS+G+ PK+QRVDLFNYNV V N+D + + + 
Sbjct  119  TSQACARTALITDVGIALATELETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGD  178

Query  213  EYRNTKTGFNADVGLSTNLNDNWTLGLAVQNIIPRSIDTKEVNGEKGTFKIKPQATAGAS  272
             Y+NTK G+NAD+G ST+L+DNWTLGL  QN+I+RSI+TKEVNG   TF+I+PQ TAG S
Sbjct  179  RYHNTKNGINADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVS  238

Query  273  WHNSFITTALDVDLTEASGFTSDNKRQFASLGAEINAWNWMQVRAGYRQNMASGEGNAFT  332
            WHN+ +TTA+DVDLT ASGFTSD++RQFA++G+E+NAW+W Q+RAGYRQN+A+ +G+AFT
Sbjct  239  WHNAMFTTAFDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFT  298

Query  333  AGLGFSPFDVAHLDITGIAGTDRTYGAVAQLQFTF  367
            AG+G+SPFDV HLD++G+ GTD TYGAVAQ+QFTF
Sbjct  299  AGVGISPFDVVHLDVAGLIGTDNTYGAVAQFQFTF  333

27) Pecwa_0705 in NC_013421


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  278 bits (1040),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 180/333 (55%), Positives = 255/333 (77%), Gaps = 0/333 (0%)

Query  67   LILPAVGAQLSDPDNLQDGVDRIDNDWKSFERIVSVGGDASLAASKLRGSLQDFsgshak  126
            ++LP+VGAQLS+PDN+ D  DRI ++WK+F+R +    + + AA++L+  L+DF  +HA 
Sbjct  1    MLLPSVGAQLSNPDNITDNADRISDEWKAFDRAIESNHGVPEAAARLKEHLRDFRNTHAA  60

Query  127  ahagasTVAAVPNSVLPFAVVAKAWGTATVKTNVTDSDLQWLDGVSNGTANGSDLSSLTS  186
            A+ G S+VAA+P   L+ A++ K+ GT +V  +V+D+DL  L+ V+N+T++  D S LTS
Sbjct  61   AQLGVSAVAALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTS  120

Query  187  SANGRaavvadvgvamaHEFNVGGFEFSAGITPKVQRVYTFNYNVAINNYDSSDFRSGNY  246
             A +R+A+++DVG+A+A E++ +G   S G+ PK QRV  FNYNV + NYDSS F+++ Y
Sbjct  121  QACARTALITDVGIALATELETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRY  180

Query  247  RNDKTGANVDVGFSTNLSDNWIVGLVGQNLVARSIETKEVNGVKDTFKIKPQATLGTAYS  306
            +N K G N D+G ST+L DNW +GLV+QNL++RSIETKEVNG+ +TF+I+PQ T G +  
Sbjct  181  HNTKNGINADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWH  240

Query  307  NDFFTTALDVDLTPASRFNSDKDSQFVSVGGELNAWKWAQLRAGYRTDIHDSDNSYFTAG  366
            N  FTTA+DVDLTPAS F SD + QF ++G E+NAWKWAQLRAGYR ++ ++D S FTAG
Sbjct  241  NAMFTTAFDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAG  300

Query  367  IGLSPFDVVHLDITGMAGTDRTYGAVAQLTFTF  399
            +G+SPFDVVHLD++G+ GTD TYGAVAQ+ FTF
Sbjct  301  VGISPFDVVHLDVAGLIGTDNTYGAVAQFQFTF  333

28) W5S_3427 in NC_017845


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  275 bits (1029),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 179/333 (54%), Positives = 257/333 (78%), Gaps = 0/333 (0%)

Query  68   LILPAVGAQVSDPDNLQDGVDRIDNDWKSFERIVSAGGDASLAASKLRGSLQDFsgshak  127
            ++LP+VGAQ+S+PDN+ D  DRI ++WK+F+R + +  + + AA++L+  L+DF  +HA 
Sbjct  1    MLLPSVGAQLSNPDNITDNADRISDEWKAFDRAIESNHGVPEAAARLKEHLRDFRNTHAA  60

Query  128  ahagasTVAAVPNSVLPFAIVAKAWGTATVKTNVTDSDLQWLDGVSNGTANGSDLSSLTS  187
            A+ G S+VAA+P   L+ A++ K+ GT +V  +V+D+DL  L+ V+N+T++  D S LTS
Sbjct  61   AQLGVSAVAALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTS  120

Query  188  SANGRaavvadvgvamaREFNVGGFAFSAGITPKVQRVYTFNYNVAINNYDSSDFRSGNY  247
             A +R+A+++DVG+A+A E++ +G   S G+ PK QRV  FNYNV + NYDSS F+++ Y
Sbjct  121  QACARTALITDVGIALATELETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRY  180

Query  248  RNDKTGANVDVGFSTNLNDNWIVGLVGQNLIARSIETKEVNGVKDTFKIKPQATLGTAYS  307
            +N K G N D+G ST+L+DNW +GLV+QNLI+RSIETKEVNG+ +TF+I+PQ T G +  
Sbjct  181  HNTKNGINADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWH  240

Query  308  NGFVTTALDVDLTPASRFNSDKDSQFVSVGGELNAWKWAQLRAGYRTDIHDSDNSYFTAG  367
            N+  TTA+DVDLTPAS F SD + QF ++G E+NAWKWAQLRAGYR ++ ++D S FTAG
Sbjct  241  NAMFTTAFDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAG  300

Query  368  IGLSPFDVVHLDITGMAGTDRTYGAVAQLTFTF  400
            +G+SPFDVVHLD++G+ GTD TYGAVAQ+ FTF
Sbjct  301  VGISPFDVVHLDVAGLIGTDNTYGAVAQFQFTF  333

29) traF in NC_004547


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  254 bits (948),  Expect = 6e-69, Method: Compositional matrix adjust.
 Identities = 177/333 (54%), Positives = 258/333 (78%), Gaps = 0/333 (0%)

Query  68   LILPAVGAQVSDPDNLQDGVDRIDNDWKSFERAVNAGGDTSLSAAKLRASLQDLsgshak  127
            ++LP+VGAQ+S+PDN+ D  DRI ++WK+F+RA+++  + + +AA+L+  L+D+  +HA 
Sbjct  1    MLLPSVGAQLSNPDNITDNADRISDEWKAFDRAIESNHGVPEAAARLKEHLRDFRNTHAA  60

Query  128  ahagasTVAAVPNSVLPFAVLAKGWGTATVKTNVTDSDLQWLDGVSNGTANGSDLSSLTS  187
            A+ G S+VAA+P   L+ A++ K+ GT +V  +V+D+DL  L+ V+N+T++  D S LTS
Sbjct  61   AQLGVSAVAALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTS  120

Query  188  SANGRaavvadvgvamaREFNVGGFEFSAGITPKVQRVYTFNYNVAINKydssdfrssdy  247
             A +R+A+++DVG+A+A E++ +G   S G+ PK QRV  FNYNV + +YDSS F++  Y
Sbjct  121  QACARTALITDVGIALATELETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRY  180

Query  248  rndKTGANVDVGFATNLSDNWIVGLVGQNLVARSIETKEVNGVKDTFKIKPQATLGTAYS  307
            +N K G N D+G +T+L DNW +GLV+QNL++RSIETKEVNG+ +TF+I+PQ T G +  
Sbjct  181  HNTKNGINADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWH  240

Query  308  NGFFTTALDVDLTPASRFNSDKDSQFVSVGGELNAWKWAQLRAGYRTDIHDSDNSYFTAG  367
            N+ FTTA+DVDLTPAS F SD + QF ++G E+NAWKWAQLRAGYR ++ ++D S FTAG
Sbjct  241  NAMFTTAFDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAG  300

Query  368  IGLSPFDVVHLDITGMAGTDRTYGAVAQLTFTF  400
            +G+SPFDVVHLD++G+ GTD TYGAVAQ+ FTF
Sbjct  301  VGISPFDVVHLDVAGLIGTDNTYGAVAQFQFTF  333

30) Ser39006_1546 in NC_022268


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  252 bits (942),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 155/335 (47%), Positives = 239/335 (72%), Gaps = 3/335 (0%)

Query  68   IILPAVGAQVSDPDNLQDGFDNVKHTWDNLENTTGTGHSASSAAD-LRKSLTDISGHSGR  126
            ++LP+VGAQ+S+PDN+ D  D + + W  ++ +  + H+ + AA  L+  L D+    + 
Sbjct  1    MLLPSVGAQLSNPDNITDNADRISDEWKAFDRAIESNHGVPEAAARLKEHLRDFRNTHAA  60

Query  127  ADAGVGAMIAVPNATLPFALVIKGWGQAKAHAVVSDSDLTYLDAASTGLVQPDDSTLNNL  186
            A+ GV+A+ A+P   L+ AL++K+ G    ++ VSD+DLTYL+  + +  Q  D +   L
Sbjct  61   AQLGVSAVAALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKS--RL  118

Query  187  TSRAEGVAALISEYGIAMAHPFTLGKVPVSVGITPKFQRVDTWNYNVAINNYSTSDFHSG  246
            TS+A + +ALI++ GIA+A  +  +    S+G+ PKFQRVD  NYNV + NY +S F ++
Sbjct  119  TSQACARTALITDVGIALATELETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGD  178

Query  247  DWQRSKSGANVDLGFSADLTPEWTVALAVQNLVARSVDTREVNGLQDSFNIRPQATAGTA  306
              + +K+G N D+G S+DL  +WT++L  QNL++RS++T+EVNG+ ++F IRPQ TAG +
Sbjct  179  RYHNTKNGINADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVS  238

Query  307  WSNGLVTFAADIDMTPASGFASDEKRQYASIGAELNAWSWAQLRAGYRADMRNSGNNVVT  366
            W N++ T A D+D+TPASGF+SD +RQ+A+IG+E+NAW WAQLRAGYR ++  ++ +  T
Sbjct  239  WHNAMFTTAFDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFT  298

Query  367  AGIGISPLDVVHLDLTGMAGTDRTYGAVAQLSVTF  401
            AG+GISP+DVVHLD++G+ GTD TYGAVAQ+  TF
Sbjct  299  AGVGISPFDVVHLDVAGLIGTDNTYGAVAQFQFTF  333

31) PAJ_2535 in NC_017531


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  242 bits (904),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 157/335 (47%), Positives = 237/335 (71%), Gaps = 3/335 (0%)

Query  69   LILPGVGAQISDPDNLRDGLDRVKSTFDDFRDSAGTGNSSRQAAA-LKQALQDVDGDSGH  127
            ++LP+VGAQ+S+PDN+ D  DR+      F  +  + ++  +AAA LK+ L+D     + 
Sbjct  1    MLLPSVGAQLSNPDNITDNADRISDEWKAFDRAIESNHGVPEAAARLKEHLRDFRNTHAA  60

Query  128  ASAGLSAVIAIPNDTLPFAFVAKGWGQAKVRTEITQRDLAYLDAAQSGIFSPTQTDIDQM  187
            A  G+SAV A+P D L+ A++ K+ G   V   +++ DL+YL+   ++  +  + D  ++
Sbjct  61   AQLGVSAVAALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVANS--TGQEVDKSRL  118

Query  188  TSRAQGVAALVTEYGIAAAHQFTLADMPVSVGITPKVQRVDTWNYNVSVGNYSASDFRSG  247
            TS+A + +AL+T+ GIA A ++  A+   S+G+ PK QRVD  NYNV V NY +S F+++
Sbjct  119  TSQACARTALITDVGIALATELETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGD  178

Query  248  DWKRSESGANVDVGFAAQLTPEWTVGLTGQNLVARNISTREINGITDTFQIRPQATAGTA  307
                + +G N D+G +++L  +WT+GL +QNL++R+I T+E+NGIT+TF+IRPQ TAG +
Sbjct  179  RYHNTKNGINADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVS  238

Query  308  WSNGFVTLATDVDLTPASGFASDEKAQYAGVGAELNAWYWAQLRAGYRADMRNSDRSMFT  367
            W N+  T A DVDLTPASGF+SD + Q+A++G+E+NAW WAQLRAGYR ++  +D S FT
Sbjct  239  WHNAMFTTAFDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFT  298

Query  368  AGVGISPFNVVHLDLTGMAGTDRSYGAAAQLSFTF  402
            AGVGISPF+VVHLD++G+ GTD +YGA AQ+ FTF
Sbjct  299  AGVGISPFDVVHLDVAGLIGTDNTYGAVAQFQFTF  333

32) PAGR_g3788 in NC_017554


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  240 bits (896),  Expect = 9e-65, Method: Compositional matrix adjust.
 Identities = 155/335 (47%), Positives = 237/335 (71%), Gaps = 3/335 (0%)

Query  69   LILPGVGAQISDPDNLRDGLDRVKSTFDDFRESAGTGNSSRQAAA-LKLALQDVDGDSGH  127
            ++LP+VGAQ+S+PDN+ D  DR+      F  +  + ++  +AAA LK  L+D     + 
Sbjct  1    MLLPSVGAQLSNPDNITDNADRISDEWKAFDRAIESNHGVPEAAARLKEHLRDFRNTHAA  60

Query  128  ASAGLSAVIAIPNDTLPFAFVARGWGQAKVRTEITQRDLAYLDAAQSGIFSPTQTDIDQM  187
            A  G+SAV A+P D L+ A++ ++ G   V   +++ DL+YL+   ++  +  + D  ++
Sbjct  61   AQLGVSAVAALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVANS--TGQEVDKSRL  118

Query  188  TSRAQGVAALVTEYGIAAAHQFTLADTPVSVGITPKVQRVDTWNYNVSVGNYSASDFRSV  247
            TS+A + +AL+T+ GIA A ++  A+   S+G+ PK QRVD  NYNV V NY +S F++ 
Sbjct  119  TSQACARTALITDVGIALATELETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGD  178

Query  248  DWKHSESGANVDVGFAAQLTPEWTVGLTGQNLVARNISTREINGITDTFQIRPQATAGTA  307
               ++ +G N D+G +++L  +WT+GL +QNL++R+I T+E+NGIT+TF+IRPQ TAG +
Sbjct  179  RYHNTKNGINADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVS  238

Query  308  WSNGFVTLATDVDLTPASGFASDEKVQYAGVGAELNAWNWAQLRAGYRADMHNSDRSMFT  367
            W N+  T A DVDLTPASGF+SD + Q+A++G+E+NAW+WAQLRAGYR ++  +D S FT
Sbjct  239  WHNAMFTTAFDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFT  298

Query  368  AGLGISPFNVVHLDLTGMAGTDRSYGAAAQLSFTF  402
            AG+GISPF+VVHLD++G+ GTD +YGA AQ+ FTF
Sbjct  299  AGVGISPFDVVHLDVAGLIGTDNTYGAVAQFQFTF  333

33) traF1 in NC_016816


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  239 bits (893),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 155/335 (47%), Positives = 236/335 (71%), Gaps = 3/335 (0%)

Query  69   LILPGVGAQISDPDNLRDGLDRVKSTFDDFRESAGTGNSSRQAAA-LKLALQDVDGDSGH  127
            ++LP+VGAQ+S+PDN+ D  DR+      F  +  + ++  +AAA LK  L+D     + 
Sbjct  1    MLLPSVGAQLSNPDNITDNADRISDEWKAFDRAIESNHGVPEAAARLKEHLRDFRNTHAA  60

Query  128  ASAGLSAVIAIPNDTLPFAFVARGWGQAKVRTEITQRDLAYLDAAQSGIFSPTQTDIDQM  187
            A  G+SAV A+P D L+ A++ ++ G   V   +++ DL+YL+   ++  +  + D  ++
Sbjct  61   AQLGVSAVAALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVANS--TGQEVDKSRL  118

Query  188  TSRAQGVAALVTEYGIAAAHQFTLADTPVSVGITPKVQRVDTWNYNVSVGNYSASDFRSV  247
            TS+A + +AL+T+ GIA A ++  A+   S+G+ PK QRVD  NYNV V NY +S F++ 
Sbjct  119  TSQACARTALITDVGIALATELETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGD  178

Query  248  DWKRSESGANVDVGFAAQLTPEWTVGLTGQNLVARNISTREINGITDTFQIRPQATAGTA  307
                + +G N D+G +++L  +WT+GL +QNL++R+I T+E+NGIT+TF+IRPQ TAG +
Sbjct  179  RYHNTKNGINADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVS  238

Query  308  WSNGFVTLATDVDLTPASGFASDEKVQYAGVGAELNAWNWAQLRAGYRADMRNSDRSMFT  367
            W N+  T A DVDLTPASGF+SD + Q+A++G+E+NAW+WAQLRAGYR ++  +D S FT
Sbjct  239  WHNAMFTTAFDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFT  298

Query  368  AGLGISPFNVVHLDLTGMAGTDRSYGAAAQLSFTF  402
            AG+GISPF+VVHLD++G+ GTD +YGA AQ+ FTF
Sbjct  299  AGVGISPFDVVHLDVAGLIGTDNTYGAVAQFQFTF  333

34) traF in NC_014306


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  233 bits (869),  Expect = 1e-62, Method: Compositional matrix adjust.
 Identities = 146/341 (43%), Positives = 236/341 (70%), Gaps = 8/341 (2%)

Query  73   VILPAAGLQVTDKNNLVDKVDDLTDSVDRYQDIANNITSFADYPKVQAAAGDLASQLRGI  132
            ++LP+ G Q+++ +N+ D+ D ++D    ++       ++     V  AA+ L  +LR++
Sbjct  1    MLLPSVGAQLSNPDNITDNADRISDEWKAFD------RAIESNHGVPEAAARLKEHLRDF  54

Query  133  KGNQAHGTAGAAFAVTIPNETLPFAFVTKAYGTAHVTADVTQSDIDYLQGVADGTVFPLP  192
            +  +A +  G +   ++P + L+ A++ K+ GT  V + V+++D+ YL+ VA++T     
Sbjct  55   RNTHAAAQLGVSAVAALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVANST--GQE  112

Query  193  GDQSKLTSAGLGRGAIVYDYGVAVAHEFNIAGHPVSFGVTPKLQKTYLYNYSASVYNYDK  252
             D+S+LTS + +R A++ D G+A+A E++ AG+  S+G  PK+Q+  L+NY+  V NYD 
Sbjct  113  VDKSRLTSQACARTALITDVGIALATELETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDS  172

Query  253  SDFTNGRYKNTNSGFNLDAGAATDIGDNWTLGLSAQNLISRDIDTKEVNGYKDTYQISPI  312
            S F  +RY NT++G+N D GA+TD++DNWTLGL AQNLISR I+TKEVNG  +T++I P 
Sbjct  173  SAFKGDRYHNTKNGINADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITETFRIRPQ  232

Query  313  VTPGVSFHTERLTAALDVDVTPTKGFKTQEESQYAGVGAEYRLLSWLQLRAGYRADMKSN  372
            VT+GVS H   +T+A+DVD+TP+ GF ++ + Q+A++G+E+    W QLRAGYR ++ +N
Sbjct  233  VTAGVSWHNAMFTTAFDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGN  292

Query  373  DTNVYTAGFGLSPFGKVHLDLAGMKGDDRTWGAVAQLNFTF  413
            D + +TAG G+SPF+ VHLD+AG+ G D T GAVAQ++FTF
Sbjct  293  DGSAFTAGVGISPFDVVHLDVAGLIGTDNTYGAVAQFQFTF  333

35) traF in NC_010694


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  225 bits (839),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 145/340 (43%), Positives = 235/340 (70%), Gaps = 9/340 (2%)

Query  73   IILPAVGAQISdkdklvdkvddIADTVDRYKSMLDNF--TFADIPRLRAASGDLANRLRD  130
            ++LP+VGAQ+S+ D+       I+D  DR       F  ++     +  A++ L ++LRD
Sbjct  1    MLLPSVGAQLSNPDN-------ITDNADRISDEWKAFDRAIESNHGVPEAAARLKEHLRD  53

Query  131  IRGDKAWGQAGAALAVTVPNDRLPFAFVTKAYGTAYGTSNISQHDIDLLQGIANATAFPS  190
            +R   A +Q G +   ++P DRL+ A++ K+ GT    +++S+ D+  L+ +AN+T+   
Sbjct  54   FRNTHAAAQLGVSAVAALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVANSTGQEV  113

Query  191  FQDKLTSTGLGRAAIVYDFGIAMAHEFDIGGHPFSFGVTPKLQKTTLYNYSASVYSYKRS  250
             + +LTS + +R+A++ D GIA+A E++ +G+  S+G  PK+Q+  L+NY+  V +Y  S
Sbjct  114  DKSRLTSQACARTALITDVGIALATELETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSS  173

Query  251  DLTNDKYKNTHTDFNLDLGAATDLGDNWTLGLSGQNLIAHNLDTKEVNGYRDTYQIRPLV  310
             +  D+Y NT  ++N D+GA+TDL+DNWTLGL +QNLI+++++TKEVNG  +T++IRP V
Sbjct  174  AFKGDRYHNTKNGINADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITETFRIRPQV  233

Query  311  TSGVSFHTERLTTALDIDLTPTKRFKIQQDSQYAGIGAEYRLLEWLQLRGGYRADMKSND  370
            T+GVS H   +TTA+D+DLTP+  F  + + Q+A+IG+E+    W QLR+GYR ++ +ND
Sbjct  234  TAGVSWHNAMFTTAFDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGND  293

Query  371  TNVFTGGVGISPYKKVHLDLAGMVGKDKTWGAVAQLNFTF  410
             + FT+GVGISP+  VHLD+AG++G D+T GAVAQ++FTF
Sbjct  294  GSAFTAGVGISPFDVVHLDVAGLIGTDNTYGAVAQFQFTF  333

36) traF in NC_017390


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  220 bits (819),  Expect = 1e-58, Method: Compositional matrix adjust.
 Identities = 135/294 (46%), Positives = 214/294 (73%), Gaps = 0/294 (0%)

Query  117  LRAASGDLANRLRDIRGENAWGQAGAALAVTIPDDTLPFAFVTKAYGTAYGTSNVTQHDI  176
            +  A++ L ++LRD+R  +A +Q G +   ++P+D L+ A++ K+ GT    ++V++ D+
Sbjct  40   VPEAAARLKEHLRDFRNTHAAAQLGVSAVAALPGDRLSAALMVKSHGTVSVDGKVSDADL  99

Query  177  DLLQGIADATLFPSFDDQLTSTALGRAAIVYDVGVAVAHEFDIGGHPFSLGVTPKLQKTT  236
              L+ +A++T       +LTS A +R+A++ DVG+A+A E++ +G+  SLG  PK+Q+  
Sbjct  100  TYLEEVANSTGQEVDKSRLTSQACARTALITDVGIALATELETAGQKWSLGFPPKFQRVD  159

Query  237  LYNYSASVYSFKKSDLTDGKYKNTDTGFNLDVGAATDLGDNWTLGLSGQNLISRDIDTKE  296
            L+NY+  V ++  S + +++Y NT  G+N D+GA+TDL+DNWTLGL +QNLISR I+TKE
Sbjct  160  LFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDNWTLGLVAQNLISRSIETKE  219

Query  297  VNGYQDTYQIRPLVTSGVSFHTERLTTALDVDITPTKRFKIQQDSQYASIGAEYRLLDWL  356
            VNG  +T++IRP VT+GVS H   +TTA+DVD+TP+  F  + + Q+A+IG+E+    W 
Sbjct  220  VNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTSDSNRQFAAIGTEFNAWKWA  279

Query  357  QLRGGYRADMKSNDTNVFTGGVGISPYNKVHLDLAGMVGKDNTWGAVAQLNFTF  410
            QLR+GYR ++ +ND + FT+GVGISP++ VHLD+AG++G DNT GAVAQ++FTF
Sbjct  280  QLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTDNTYGAVAQFQFTF  333

37) traF in NC_012214


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  220 bits (819),  Expect = 1e-58, Method: Compositional matrix adjust.
 Identities = 135/294 (46%), Positives = 214/294 (73%), Gaps = 0/294 (0%)

Query  117  LRAASGDLANRLRDIRGENAWGQAGAALAVTIPDDTLPFAFVTKAYGTAYGTSNVTQHDI  176
            +  A++ L ++LRD+R  +A +Q G +   ++P+D L+ A++ K+ GT    ++V++ D+
Sbjct  40   VPEAAARLKEHLRDFRNTHAAAQLGVSAVAALPGDRLSAALMVKSHGTVSVDGKVSDADL  99

Query  177  DLLQGIADATLFPSFDDQLTSTALGRAAIVYDVGVAVAHEFDIGGHPFSLGVTPKLQKTT  236
              L+ +A++T       +LTS A +R+A++ DVG+A+A E++ +G+  SLG  PK+Q+  
Sbjct  100  TYLEEVANSTGQEVDKSRLTSQACARTALITDVGIALATELETAGQKWSLGFPPKFQRVD  159

Query  237  LYNYSASVYSFKKSDLTDGKYKNTDTGFNLDVGAATDLGDNWTLGLSGQNLISRDIDTKE  296
            L+NY+  V ++  S + +++Y NT  G+N D+GA+TDL+DNWTLGL +QNLISR I+TKE
Sbjct  160  LFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDNWTLGLVAQNLISRSIETKE  219

Query  297  VNGYQDTYQIRPLVTSGVSFHTERLTTALDVDITPTKRFKIQQDSQYASIGAEYRLLDWL  356
            VNG  +T++IRP VT+GVS H   +TTA+DVD+TP+  F  + + Q+A+IG+E+    W 
Sbjct  220  VNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTSDSNRQFAAIGTEFNAWKWA  279

Query  357  QLRGGYRADMKSNDTNVFTGGVGISPYNKVHLDLAGMVGKDNTWGAVAQLNFTF  410
            QLR+GYR ++ +ND + FT+GVGISP++ VHLD+AG++G DNT GAVAQ++FTF
Sbjct  280  QLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTDNTYGAVAQFQFTF  333

38) Pat9b_0295 in NC_014837


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  220 bits (819),  Expect = 1e-58, Method: Compositional matrix adjust.
 Identities = 144/345 (42%), Positives = 232/345 (68%), Gaps = 12/345 (3%)

Query  72   IIFPSAGIQVTDKDKLINRVDDITDTVDRYQNVIDNLTFQDYLNGYPQLKAAAGDMASQL  131
            +++PS G Q+++ D++ +  D I+D    ++  I++       +G P+   AA+ +  +L
Sbjct  1    MLLPSVGAQLSNPDNITDNADRISDEWKAFDRAIESN------HGVPE---AAARLKEHL  51

Query  132  RDLRGNKADGSAGVALAVTVPNETLPFAFVTKAYGTAHIRANVSQSDIDYLQGVADGTVI  191
            RD+R   A +  GV+   ++P + L+ A++ K+ GT  + ++VS++D+ YL+ VA++T  
Sbjct  52   RDFRNTHAAAQLGVSAVAALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVANSTGQ  111

Query  192  PVPGDEDKLTSSANGLAALVTDYGIAMAHQFSIAGHPVSVGITPKLQKTWLYNYTASVYN  251
             V  D  +LTS A + +AL+TD GIA+A ++  AG+  S+G+ PK+Q+  L+NY   V N
Sbjct  112  EV--DKSRLTSQACARTALITDVGIALATELETAGQKWSLGFPPKFQRVDLFNYNVLVRN  169

Query  252  YDKSDINNSRYRSSDTGFNVDAGIATDFADNWTFGLTGQNLISRDIETKEVNGYRDTYQI  311
            YD S ++  RY+++  G+N D G +TD+ DNWT+GL +QNLISR IETKEVNG  +T++I
Sbjct  170  YDSSAFKGDRYHNTKNGINADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITETFRI  229

Query  312  RPLVTTGLAWNYGAFTLTGDVDLTQTKRFKSEDSSQYVGVGGEYRVLDWLQLRAGYRADM  371
            RP VT+G++W+ + FT + DVDLT +  F S+ + Q+ ++G E+    W QLRAGYR ++
Sbjct  230  RPQVTAGVSWHNAMFTTAFDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGYRQNL  289

Query  372  KSNDANVFTAGFGLSPFNNTVHLDLAGSVGDDNTWGAMLQLGFNF  416
             +ND++ FTAG G+SPF + VHLD+AG +G DNT GA+ Q+ F F
Sbjct  290  AGNDGSAFTAGVGISPF-DVVHLDVAGLIGTDNTYGAVAQFQFTF  333

39) Dd586_0867 in NC_013592


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  220 bits (821),  Expect = 7e-59, Method: Compositional matrix adjust.
 Identities = 142/350 (41%), Positives = 235/350 (68%), Gaps = 18/350 (5%)

Query  67   VILPSVGVFVSDPDKVEDKFDRIKSSWDSVKNTLNASSGVTNPLLRRLALQQGISSFQSL  126
            ++LPSVG  +S+PD++ D+ DRI   W +   +++++ GV ++  R             L
Sbjct  1    MLLPSVGAQLSNPDNITDNADRISDEWKAFDRAIESNHGVPEAAAR-------------L  47

Query  127  RGELEGINGDRAYGDaaaaaviavPNQTLPFAFVVKGWGVANAKAVVTDRDLAYLDSVAV  186
            + +L ++   +A ++ + +AV A+P + L+ A++VK+ G  +  + V+D DL+YL+ VA 
Sbjct  48   KEHLRDFRNTHAAAQLGVSAVAALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVA-  106

Query  187  GRTIPSSADLNNFTSRAEGAGALVTEYGVAMAKAFSIAGQPVSVGITPKLQQIDTYNYIA  246
              +     D + +TS+A +  AL+T+ G+A+A  +  AGQ  S+G+ PK+Q++D +NY  
Sbjct  107  -NSTGQEVDKSRLTSQACARTALITDVGIALATELETAGQKWSLGFPPKFQRVDLFNYNV  165

Query  247  SINNYSASDFRNSEFRKSTTGANLDLGVSTNLTPDWSAGLVAQNLIGRRIDTKEVQGIQR  306
             + NY +S F+   ++++  G N D+G ST+L  +W+ GLVAQNLI+R I+TKEV+GI  
Sbjct  166  LVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITE  225

Query  307  TFSLRPQVTAGTAWNKEKLTLATDIDLTPASGFDAEKKNQYAGVGAEYRVLSWAQLRVGY  366
            TF +RPQVTAG +W++  +T A D+DLTPASGF ++ + Q+A++G+E+    WAQLR GY
Sbjct  226  TFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGY  285

Query  367  RANMRDSDKDQVTAGIGLSPFG-VHLDLTGMVGTASQHTYGAAAKLSFTF  415
            R N+ ++D    TAG+G+SPF+ VHLD++G++GT  ++TYGA A++ FTF
Sbjct  286  RQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGT--DNTYGAVAQFQFTF  333

40) traF in NC_013971


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  217 bits (809),  Expect = 6e-58, Method: Compositional matrix adjust.
 Identities = 130/301 (44%), Positives = 213/301 (71%), Gaps = 0/301 (0%)

Query  110  TFEDIPNLLAASGDLADRLRDIRGEKAWGQAGAALAVTIPDYALPFAFVTKAYGSAYGTS  169
            ++E    +  A++ L ++LRD+R   A +Q G +   ++P+  L+ A++ K+ G+    +
Sbjct  33   AIESNHGVPEAAARLKEHLRDFRNTHAAAQLGVSAVAALPGDRLSAALMVKSHGTVSVDG  92

Query  170  NITQHDIDLLQGIADATTFPSSEDQLTSTALGRAAVVYDIGVAVAHEFDIVGHPFSLGVT  229
            ++++ D+  L+ +A++T       +LTS A +R+A++ D+G+A+A E++  G+  SLG  
Sbjct  93   KVSDADLTYLEEVANSTGQEVDKSRLTSQACARTALITDVGIALATELETAGQKWSLGFP  152

Query  230  PKLQKTTLYNYSASVYSYKRSDLTDGKYKNTDTGFNLDVGAATDLGDNWTLGLSGQNLIP  289
            PK+Q+  L+NY+  V +Y  S + +++Y NT  G+N D+GA+TDL+DNWTLGL +QNLI+
Sbjct  153  PKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDNWTLGLVAQNLIS  212

Query  290  RDIDTKEVNGYQDTYQIRPLVTSGVSFHTERLTAALDVDITPTKRFKIQQDSQYAGIGAE  349
            R I+TKEVNG  +T++IRP VT+GVS H   +T+A+DVD+TP+  F  + + Q+A+IG+E
Sbjct  213  RSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTSDSNRQFAAIGTE  272

Query  350  YRLLDWLQLRGGYRADMKSNDTNVFTGGFGISPYNKVHLDLAGMVGKDNTWGAVAQLNFT  409
            +    W QLR+GYR ++ +ND + FT+G GISP++ VHLD+AG++G DNT GAVAQ++FT
Sbjct  273  FNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTDNTYGAVAQFQFT  332

Query  410  F  410
            F
Sbjct  333  F  333

41) traF in NC_013961


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  217 bits (809),  Expect = 6e-58, Method: Compositional matrix adjust.
 Identities = 130/301 (44%), Positives = 213/301 (71%), Gaps = 0/301 (0%)

Query  110  TFEDIPNLLAASGDLADRLRDIRGEKAWGQAGAALAVTIPDYALPFAFVTKAYGSAYGTS  169
            ++E    +  A++ L ++LRD+R   A +Q G +   ++P+  L+ A++ K+ G+    +
Sbjct  33   AIESNHGVPEAAARLKEHLRDFRNTHAAAQLGVSAVAALPGDRLSAALMVKSHGTVSVDG  92

Query  170  NITQHDIDLLQGIADATTFPSSEDQLTSTALGRAAVVYDIGVAVAHEFDIVGHPFSLGVT  229
            ++++ D+  L+ +A++T       +LTS A +R+A++ D+G+A+A E++  G+  SLG  
Sbjct  93   KVSDADLTYLEEVANSTGQEVDKSRLTSQACARTALITDVGIALATELETAGQKWSLGFP  152

Query  230  PKLQKTTLYNYSASVYSYKRSDLTDGKYKNTDTGFNLDVGAATDLGDNWTLGLSGQNLIP  289
            PK+Q+  L+NY+  V +Y  S + +++Y NT  G+N D+GA+TDL+DNWTLGL +QNLI+
Sbjct  153  PKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDNWTLGLVAQNLIS  212

Query  290  RDIDTKEVNGYQDTYQIRPLVTSGVSFHTERLTAALDVDITPTKRFKIQQDSQYAGIGAE  349
            R I+TKEVNG  +T++IRP VT+GVS H   +T+A+DVD+TP+  F  + + Q+A+IG+E
Sbjct  213  RSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTSDSNRQFAAIGTE  272

Query  350  YRLLDWLQLRGGYRADMKSNDTNVFTGGFGISPYNKVHLDLAGMVGKDNTWGAVAQLNFT  409
            +    W QLR+GYR ++ +ND + FT+G GISP++ VHLD+AG++G DNT GAVAQ++FT
Sbjct  273  FNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTDNTYGAVAQFQFT  332

Query  410  F  410
            F
Sbjct  333  F  333

42) traF in NC_017445


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  216 bits (804),  Expect = 2e-57, Method: Compositional matrix adjust.
 Identities = 133/294 (46%), Positives = 213/294 (73%), Gaps = 0/294 (0%)

Query  93   LRAASGDLANRLRDIRGENAWGQAGAALAVTIPDDTLPFAFVTKAYGTAYGTSNVTQHDI  152
            +  A++ L ++LRD+R  +A +Q G +   ++P+D L+ A++ K+ GT    ++V++ D+
Sbjct  40   VPEAAARLKEHLRDFRNTHAAAQLGVSAVAALPGDRLSAALMVKSHGTVSVDGKVSDADL  99

Query  153  DLLQGIADATLFPSFDDQLTSTALGRAAIVYDVGVAVAHEFDIGGHPFSLGVTPKLQKTT  212
              L+ +A++T       +LTS A +R+A++ DVG+A+A E++ +G+  SLG  PK+Q+  
Sbjct  100  TYLEEVANSTGQEVDKSRLTSQACARTALITDVGIALATELETAGQKWSLGFPPKFQRVD  159

Query  213  LYNYSASVYSFKKSDLTDGKYKNTDTGFNLDVGAATDLGDNWTLGLSGQNLISRDIDTKE  272
            L+NY+  V ++  S + +++Y NT  G+N D+GA+TDL+DNWTLGL +QNLISR I+TKE
Sbjct  160  LFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDNWTLGLVAQNLISRSIETKE  219

Query  273  VNGYQDTYQIRPLVTSGLSFHTERLTTALDVDITPTKRFKIQQDSQYASIGAEYRLLDWL  332
            VNG  +T++IRP VT+G+S H   +TTA+DVD+TP+  F  + + Q+A+IG+E+    W 
Sbjct  220  VNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTSDSNRQFAAIGTEFNAWKWA  279

Query  333  QLRGGYRADMKSNDTNVFTGGVGISPYNKVHLYLAGMVGKDNTWGAVAQLNFTF  386
            QLR+GYR ++ +ND + FT+GVGISP++ VHL +AG++G DNT GAVAQ++FTF
Sbjct  280  QLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTDNTYGAVAQFQFTF  333

43) Dda3937_01475 in NC_014500


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  207 bits (768),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 145/350 (42%), Positives = 236/350 (68%), Gaps = 18/350 (5%)

Query  67   LILPSVGVVVSDPEKVEDKFDRIKNSWDSIKDVLNSSSGITNPLLRRLALQQGISSFQSL  126
            ++LPSVG  +S+P+++ D+ DRI + W ++   ++S+ G+ ++  R             L
Sbjct  1    MLLPSVGAQLSNPDNITDNADRISDEWKAFDRAIESNHGVPEAAAR-------------L  47

Query  127  RSDLNSINDDRAYGDaaaatvvavPNETLPFAVVVKGWGVANAKAVVTDRDLAYLDSVAA  186
            + +L  + + +A ++ + ++V A+P + L+ A++VK+ G  +  + V+D DL+YL+ VA 
Sbjct  48   KEHLRDFRNTHAAAQLGVSAVAALPGDRLSAALMVKSHGTVSVDGKVSDADLTYLEEVAN  107

Query  187  GTTIPTSADLNNFTSRAEGAGALVTEYGVAMAKAFSIAGQPVSVGITPKLQRIDTynyia  246
            +T      D + +TS+A +  AL+T+ G+A+A  +  AGQ  S+G+ PK+QR+D +NY  
Sbjct  108  STG--QEVDKSRLTSQACARTALITDVGIALATELETAGQKWSLGFPPKFQRVDLFNYNV  165

Query  247  sinnysssDFRNSEFKKSSSGANLDLGFSTDLTSRWSAGLVAQNLIGRRIDTKEVQGIQR  306
             + NY SS F+   + ++ +G N D+G STDL   W+ GLVAQNLI+R I+TKEV+GI  
Sbjct  166  LVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITE  225

Query  307  TFHLRPQVTAGTAWSTDALTLATDIDLTPASGFDSEKKNQYAGVGAEYRVLSWAQLRVGY  366
            TF++RPQVTAG +W    +T A D+DLTPASGF S+ + Q+A++G+E+    WAQLR GY
Sbjct  226  TFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGY  285

Query  367  RANMRDSDKNLVTAGLGLSPFG-VHLDLTGMVGTESKHTYGAAAKLSFTF  415
            R N+ ++D +  TAG+G+SPF+ VHLD++G++GT+  +TYGA A++ FTF
Sbjct  286  RQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTD--NTYGAVAQFQFTF  333

44) traF in NC_014562


> AF200692|4|G4|12643207|AAK00459.1|Shigella_flexneri_2a_YSH6000T|+|7610..8611|-|-|unknown
Length=333

 Score =  197 bits (733),  Expect = 7e-52, Method: Compositional matrix adjust.
 Identities = 125/308 (41%), Positives = 205/308 (67%), Gaps = 3/308 (0%)

Query  109  TFADYLRGYPELRAASGDVADKLSDLRGNKADGSAGVAVAVTIPNETLPFAFITKAYGTA  168
            +F   + +   +  A++ + + L D+R   A +  GV+   ++P + L+ A++ K+ GT 
Sbjct  29   AFDRAIESNHGVPEAAARLKEHLRDFRNTHAAAQLGVSAVAALPGDRLSAALMVKSHGTV  88

Query  169  HVRANVVQGDIDYLRGVANGTVLPRPGDQNNLRSSANGLAALTIDYGVAVAHEFTIAGQP  228
             V ++V ++D+ YL  VAN+T   +  D++ L S A + +AL  D G+A+A E+  AGQ 
Sbjct  89   SVDGKVSDADLTYLEEVANST--GQEVDKSRLTSQACARTALITDVGIALATELETAGQK  146

Query  229  VSVGVTPKVQKTSLYNYTASIYNYDKNDINNSQYRSTDTGFNVDAGLATTFAENWTLGVT  288
             S+G  PK Q+  L+NY   + NYD + ++  +Y++T  G+N D G +T + +NWTLG+ 
Sbjct  147  WSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDNWTLGLV  206

Query  289  GQNLVSRDLQTKEVNGFRDTYQIRPLVTTGLSWDKGPFTVTGDVDLTETKRFKTQDNSQY  348
            +QNL+SR ++TKEVNG+ +T++IRP VT+G+SW+++ FT + DVDLT +  F ++ N Q+
Sbjct  207  AQNLISRSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTSDSNRQF  266

Query  349  AAVGAEYRVLDWLQLRAGYRADMRSNDENVATAGFGLSPFNKAVHLDLAGSVGANNTWGA  408
            AA+G+E+    W QLRAGYR ++ +ND +  TAG G+SPF+  VHLD+AG +G++NT GA
Sbjct  267  AAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFD-VVHLDVAGLIGTDNTYGA  325

Query  409  MMQLGFNF  416
            + Q+ F F
Sbjct  326  VAQFQFTF  333