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Homologs of hp3 gene of AF081284

DNA-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) EcE24377A_4882
( - )

NC_009801
(Escherichia coli E24377A)

e-156

99.3

2) ECO103_p24
( - )

NC_013354
(Escherichia coli 12009)

e-140

100

3) unnamed
( - )

NC_013354
(Escherichia coli 12009)

e-140

100

• Sequence Alignments

1) EcE24377A_4882 in NC_009801


>AF081284|4|G4|3661484|AAC61715.1|Escherichia_coli_CFT073|+|2891..3181|hp3|-|Hp3 
          Length = 291

 Score = 547 bits (1412), Expect = e-156
 Identities = 289/293 (99%)
 Strand = Plus / Plus

Query: 1   atgcagaaaaatgtgactcccggcaggtgaaaaggctgccctaattatcctcccgaattt 60
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1   atgcagaaaaatgtgactcccggcaggcgaaaaggctgccctaattatcctcccgaattt 60

Query: 61  aaacagcagctcgttgctgcctcctgtgaacccgggatatccatctcaaaacttgctctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aaacagcagctcgttgctgcctcctgtgaacccgggatatccatctcaaaacttgctctt 120

Query: 121 gaaaatggcattaacgccaatctgttgttcaaatggcgacaacaatggcgcgagggaaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaaaatggcattaacgccaatctgttgttcaaatggcgacaacaatggcgcgagggaaag 180

Query: 181 ctgctattaccttcttcagagagcccccagctacttcctgtgactcccgatgcagctgcc 240
           ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 181 ctgctattaccttcttcagagagcccccagctacttcctgtga-tctcgatgcagctgcc 239

Query: 241 gaacagccagaatcgctcgcagaggacccggaaaccctcagtatcagctgtga 293
           |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 240 gaacagccagaatcgctcgcagaggacc-ggaaaccctcagtatcagctgtga 291

2) unnamed in NC_013354


>AF081284|4|G4|3661484|AAC61715.1|Escherichia_coli_CFT073|+|2891..3181|hp3|-|Hp3 
          Length = 291

 Score = 494 bits (1276), Expect = e-140
 Identities = 257/258 (100%)
 Strand = Plus / Plus

Query: 93  atgcagaaaaatgtgactcccggcaggcgaaaaggctgccctaattatcctcccgaattt 152
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgcagaaaaatgtgactcccggcaggcgaaaaggctgccctaattatcctcccgaattt 60

Query: 153 aaacagcagctcgttgctgcctcctgtgaacccgggatatccatctcaaaacttgctctt 212
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aaacagcagctcgttgctgcctcctgtgaacccgggatatccatctcaaaacttgctctt 120

Query: 213 gaaaatggcattaacgccaatctgttgttcaaatggcgacaacaatggcgcgagggaaag 272
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaaaatggcattaacgccaatctgttgttcaaatggcgacaacaatggcgcgagggaaag 180

Query: 273 ctgctattaccttcttcagagagcccccagctacttcctgtgactctcgatgcagctgcc 332
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 181 ctgctattaccttcttcagagagcccccagctacttcctgtga-tctcgatgcagctgcc 239

Query: 333 gaacagccagaatcgctc 350
           ||||||||||||||||||
Sbjct: 240 gaacagccagaatcgctc 257

3) ECO103_p24 in NC_013354


>AF081284|4|G4|3661484|AAC61715.1|Escherichia_coli_CFT073|+|2891..3181|hp3|-|Hp3 
          Length = 291

 Score = 494 bits (1276), Expect = e-140
 Identities = 257/258 (100%)
 Strand = Plus / Plus

Query: 22  atgcagaaaaatgtgactcccggcaggcgaaaaggctgccctaattatcctcccgaattt 81
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgcagaaaaatgtgactcccggcaggcgaaaaggctgccctaattatcctcccgaattt 60

Query: 82  aaacagcagctcgttgctgcctcctgtgaacccgggatatccatctcaaaacttgctctt 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aaacagcagctcgttgctgcctcctgtgaacccgggatatccatctcaaaacttgctctt 120

Query: 142 gaaaatggcattaacgccaatctgttgttcaaatggcgacaacaatggcgcgagggaaag 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaaaatggcattaacgccaatctgttgttcaaatggcgacaacaatggcgcgagggaaag 180

Query: 202 ctgctattaccttcttcagagagcccccagctacttcctgtgactctcgatgcagctgcc 261
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 181 ctgctattaccttcttcagagagcccccagctacttcctgtga-tctcgatgcagctgcc 239

Query: 262 gaacagccagaatcgctc 279
           ||||||||||||||||||
Sbjct: 240 gaacagccagaatcgctc 257