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PAthogenisity Island DataBase (PAI DB)

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Homologs of pipD gene of AF060858

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SBOV10071
( YP_008504880.1 )

hypothetical protein

NC_022241
(Salmonella enterica 3114)

1e-178

2) SU5_01725
( YP_006087361.1 )

pathogenicity island encoded protein: SPI3

NC_017623
(Salmonella enterica B182)

1e-178

3) SeSA_A1158
( YP_002114092.1 )

peptidase family C69

NC_011094
(Salmonella enterica CVM19633)

1e-178

4) SPAB_02461
( YP_001588675.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

1e-178

5) SeHA_C1204
( YP_002045095.1 )

peptidase family C69

NC_011083
(Salmonella enterica SL476)

1e-178

6) pipD
( YP_005236828.1 )

pathogenicity island-encoded protein D

NC_016856
(Salmonella enterica 14028S)

2e-178

7) pipD
( YP_005396509.1 )

secreted peptidase

NC_017046
(Salmonella enterica 798)

2e-178

8) SeD_A1169
( YP_002215025.1 )

peptidase family C69

NC_011205
(Salmonella enterica CT_02021853)

2e-178

9) STBHUCCB_19420
( YP_005217482.1 )

dipeptidase

NC_016832
(Salmonella enterica P-stx-12)

2e-178

10) pipD
( YP_005241990.1 )

pathogenicity island-encoded protein D

NC_016857
(Salmonella enterica ST4/74)

2e-178

11) TY21A_09290
( YP_007926144.1 )

hypothetical protein

NC_021176
(Salmonella enterica Ty21a)

2e-178

12) SE451236_11320
( YP_008265293.1 )

peptidase

NC_021820
(Salmonella enterica 08-1736)

3e-178

13) SEEH1578_14695
( YP_008246998.1 )

secreted peptidase

NC_021810
(Salmonella enterica 41578)

3e-178

14) CFSAN001921_11705
( YP_008255711.1 )

peptidase

NC_021814
(Salmonella enterica CFSAN001921)

3e-178

15) CFSAN002069_03550
( YP_008249566.1 )

peptidase

NC_021812
(Salmonella enterica CFSAN002069)

3e-178

16) pipD
( NP_460067.1 )

pathogenicity island-encoded protein D

NC_003197
(Salmonella enterica LT2)

3e-178

17) pipD
( YP_005180946.1 )

putative secreted peptidase

NC_016810
(Salmonella enterica SL1344)

3e-178

18) STMDT12_C11130
( YP_005246809.1 )

peptidase C69 family protein

NC_016860
(Salmonella enterica T000240)

3e-178

19) pipD
( YP_005251604.1 )

pathogenicity island-encoded protein D

NC_016863
(Salmonella enterica UK-1)

3e-178

20) STU288_01800
( YP_007901465.1 )

pathogenicity island encoded protein: SPI3

NC_021151
(Salmonella enterica U288)

4e-178

21) SEEB0189_14100
( YP_008309132.1 )

peptidase

NC_021844
(Salmonella enterica CFSAN000189)

6e-178

22) CFSAN001992_06175
( YP_007470991.1 )

secreted peptidase

NC_020307
(Salmonella enterica CFSAN001992)

7e-178

23) pipD
( YP_002243088.1 )

secreted peptidase

NC_011294
(Salmonella enterica P125109)

7e-178

24) SeAg_B1053
( YP_002145963.2 )

peptidase family C69 protein

NC_011149
(Salmonella enterica SL483)

7e-178

25) CFSAN002050_11865
( YP_008260288.1 )

peptidase

NC_021818
(Salmonella enterica CFSAN002050)

8e-178

26) pipD
( NP_455591.1 )

putative secreted peptidase

NC_003198
(Salmonella enterica CT18)

8e-178

27) SNSL254_A1189
( YP_002040349.1 )

peptidase family C69

NC_011080
(Salmonella enterica SL254)

8e-178

28) pipD
( NP_805597.1 )

secreted peptidase

NC_004631
(Salmonella enterica Ty2)

8e-178

29) SN31241_21610
( YP_008360078.1 )

dipeptidase

NC_021902
(Salmonella enterica USMARC-S3124.1)

8e-178

30) pipD
( YP_002638198.1 )

peptidase

NC_012125
(Salmonella enterica RKS4594)

9e-178

31) pipD
( YP_002226048.1 )

peptidase

NC_011274
(Salmonella enterica 287/91)

3e-177

32) pipD
( YP_005213121.1 )

putative secreted peptidase

NC_016831
(Salmonella enterica RKS5078)

3e-177

33) pipD
( YP_008481578.1 )

putative secreted peptidase

NC_022221
(Salmonella enterica CDC1983-67)

4e-177

34) I137_08925
( YP_008381254.1 )

peptidase

NC_021984
(Salmonella enterica S06004)

9e-177

35) SARI_01909
( YP_001570934.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

6e-168

36) pipD
( YP_004729823.1 )

secreted peptidase

NC_015761
(Salmonella bongori NCTC 12419)

1e-159

37) A464_1033
( YP_008321629.1 )

putative dipeptidase

NC_021870
(Salmonella bongori N268-08)

9e-160

38) ETAC_11150
( YP_007629711.1 )

dipeptidase

NC_020796
(Edwardsiella tarda C07-087)

4e-135

39) ETAE_2361
( YP_003296407.1 )

hypothetical protein

NC_013508
(Edwardsiella tarda EIB202)

4e-135

40) ETAF_2133
( YP_005699731.1 )

dipeptidase

NC_017309
(Edwardsiella tarda FL6-60)

4e-135

41) NT01EI_2654
( YP_002934057.2 )

peptidase, family C69

NC_012779
(Edwardsiella ictaluri 93-146)

3e-134

42) EBL_c34440
( YP_006321011.1 )

putative dipeptidase A

NC_017910
(Escherichia blattae DSM 4481)

1e-131

43) PMI0803
( YP_002150564.1 )

exported peptidase

NC_010554
(Proteus mirabilis HI4320)

1e-94

44) BB2000_0871
( YP_008397427.1 )

exported peptidase

NC_022000
(Proteus mirabilis BB2000)

2e-94

45) ASA_2511
( YP_001142290.1 )

dipeptidase

NC_009348
(Aeromonas salmonicida A449)

4e-92

46) CCV52592_0344
( YP_001407372.1 )

C69 family peptidase

NC_009715
(Campylobacter curvus 525.92)

2e-91

47) A464_2157
( YP_008322752.1 )

putative dipeptidase

NC_021870
(Salmonella bongori N268-08)

3e-91

48) SBG_1830
( YP_004730679.1 )

dipeptidase

NC_015761
(Salmonella bongori NCTC 12419)

3e-91

49) B565_1522
( YP_004392174.1 )

Dipeptidase

NC_015424
(Aeromonas veronii B565)

5e-91

50) ETAC_07950
( YP_007629071.1 )

Putative dipeptidase

NC_020796
(Edwardsiella tarda C07-087)

1e-88

51) ETAE_1728
( YP_003295778.1 )

dipeptidase

NC_013508
(Edwardsiella tarda EIB202)

1e-88

52) ETAF_1563
( YP_005699163.1 )

Putative dipeptidase

NC_017309
(Edwardsiella tarda FL6-60)

1e-88

53) BFO_1603
( YP_005014485.1 )

peptidase, C69 family

NC_016610
(Tannerella forsythia ATCC 43037)

2e-87

54) MU9_3194
( YP_007506611.1 )

Putative dipeptidase

NC_020418
(Morganella morganii KT)

4e-86

55) CCC13826_1838
( YP_001465940.1 )

S-layer-RTX protein

NC_009802
(Campylobacter concisus 13826)

5e-86

56) HMPREF9137_0311
( YP_004328046.1 )

peptidase, C69 family

NC_015311
(Prevotella denticola F0289)

1e-85

57) SARI_00887
( YP_001569945.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

8e-85

58) ETAC_10745
( YP_007629630.1 )

dipeptidase-like protein

NC_020796
(Edwardsiella tarda C07-087)

2e-80

59) ETAE_2273
( YP_003296319.1 )

dipeptidase-like protein

NC_013508
(Edwardsiella tarda EIB202)

3e-80

60) NT01EI_1980
( YP_002933391.1 )

peptidase, family C69

NC_012779
(Edwardsiella ictaluri 93-146)

5e-79

61) Poras_1283
( YP_004442391.1 )

peptidase U34 dipeptidase

NC_015501
(Porphyromonas asaccharolytica DSM 20707)

8e-79

62) ETAF_2051
( YP_005699649.1 )

dipeptidase

NC_017309
(Edwardsiella tarda FL6-60)

1e-73

• Sequence Alignments

1) SBOV10071 in NC_022241


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  619 bits (2339),  Expect = 1e-178, Method: Compositional matrix adjust.
 Identities = 378/381 (99%), Positives = 379/381 (99%), Gaps = 0/381 (0%)

Query  32   MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  91
            MKKYLAFAVTLLGMGKVIACTTL+VGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  92   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  151
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  152  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  211
            AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  212  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  271
            ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  272  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSEGETFPVFLTPITKISVAAVKN  331
            FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVS GETFPVFLTPITKISVAAVKN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  332  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  391
            ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  392  SVYLPYYQGMRHYQPGDDKGT  412
            SVYLPYYQGMRHYQPGDDKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

2) SU5_01725 in NC_017623


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  619 bits (2338),  Expect = 1e-178, Method: Compositional matrix adjust.
 Identities = 377/381 (99%), Positives = 379/381 (99%), Gaps = 0/381 (0%)

Query  32   MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPIAFHQ  91
            MKKYLAFAVTLLGMGKVIACTTL+VGNQASADGSFIIARNEDGSANNAKHKVIHP+AFHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  92   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  151
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  152  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  211
            AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  212  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  271
            ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  272  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSEGETFPVFLTPITKISVAAVKN  331
            FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVS GETFPVFLTPITKISVAAVKN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  332  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  391
            ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  392  SVYLPYYQGMRHYQPGDDKGT  412
            SVYLPYYQGMRHYQPGDDKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

3) SeHA_C1204 in NC_011083


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  619 bits (2338),  Expect = 1e-178, Method: Compositional matrix adjust.
 Identities = 377/381 (99%), Positives = 379/381 (99%), Gaps = 0/381 (0%)

Query  32   MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPIAFHQ  91
            MKKYLAFAVTLLGMGKVIACTTL+VGNQASADGSFIIARNEDGSANNAKHKVIHP+AFHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  92   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  151
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  152  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  211
            AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  212  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  271
            ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  272  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSEGETFPVFLTPITKISVAAVKN  331
            FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVS GETFPVFLTPITKISVAAVKN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  332  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  391
            ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  392  SVYLPYYQGMRHYQPGDDKGT  412
            SVYLPYYQGMRHYQPGDDKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

4) SPAB_02461 in NC_010102


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  619 bits (2339),  Expect = 1e-178, Method: Compositional matrix adjust.
 Identities = 378/381 (99%), Positives = 379/381 (99%), Gaps = 0/381 (0%)

Query  32   MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  91
            MKKYLAFAVTLLGMGKVIACTTL+VGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  92   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  151
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  152  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  211
            AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  212  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  271
            ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  272  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSEGETFPVFLTPITKISVAAVKN  331
            FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVS GETFPVFLTPITKISVAAVKN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  332  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  391
            ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  392  SVYLPYYQGMRHYQPGDDKGT  412
            SVYLPYYQGMRHYQPGDDKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

5) SeSA_A1158 in NC_011094


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  619 bits (2338),  Expect = 1e-178, Method: Compositional matrix adjust.
 Identities = 377/381 (99%), Positives = 379/381 (99%), Gaps = 0/381 (0%)

Query  32   MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  91
            MKKYLAFAVTLLGMGKVIACTTL+VGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  92   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  151
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  152  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  211
            AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  212  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  271
            ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  272  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSEGETFPVFLTPITKISVAAVKN  331
            FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVS GETFPVFLTPITKISVAAVKN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  332  ALRNHYQGTSHDPYANHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  391
            ALRNHYQGTSHDPYA+HNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  392  SVYLPYYQGMRHYQPGDDKGT  412
            SVYLPYYQGMRHYQPGDDKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

6) SeD_A1169 in NC_011205


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  618 bits (2334),  Expect = 2e-178, Method: Compositional matrix adjust.
 Identities = 378/381 (99%), Positives = 379/381 (99%), Gaps = 0/381 (0%)

Query  32   MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  91
            MKKYLAFAVTLLGMGKVIACTTL+VGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  92   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  151
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  152  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  211
            AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  212  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  271
            ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  272  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSEGETFPVFLTPITKISVAAVKN  331
            FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVS GETFPVFLTPITKISVAAVKN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  332  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  391
            ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  392  SVYLPYYQGMRHYQPGDDKGT  412
            SVYLPYYQGMRHYQPGDDKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

7) pipD in NC_016856


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  618 bits (2336),  Expect = 2e-178, Method: Compositional matrix adjust.
 Identities = 377/381 (99%), Positives = 379/381 (99%), Gaps = 0/381 (0%)

Query  32   MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPIAFHQ  91
            MKKYLAFAVTLLGMGKVIACTTL+VGNQASADGSFIIARNEDGSANNAKHKVIHP+AFHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  92   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  151
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  152  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  211
            AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  212  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  271
            ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  272  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSEGETFPVFLTPITKISVAAVKN  331
            FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVS GETFPVFLTPITKISVAAVKN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  332  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  391
            ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  392  SVYLPYYQGMRHYQPGDDKGT  412
            SVYLPYYQGMRHYQPGDDKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

8) pipD in NC_017046


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  618 bits (2336),  Expect = 2e-178, Method: Compositional matrix adjust.
 Identities = 377/381 (99%), Positives = 379/381 (99%), Gaps = 0/381 (0%)

Query  32   MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPIAFHQ  91
            MKKYLAFAVTLLGMGKVIACTTL+VGNQASADGSFIIARNEDGSANNAKHKVIHP+AFHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  92   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  151
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  152  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  211
            AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  212  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  271
            ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  272  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSEGETFPVFLTPITKISVAAVKN  331
            FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVS GETFPVFLTPITKISVAAVKN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  332  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  391
            ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  392  SVYLPYYQGMRHYQPGDDKGT  412
            SVYLPYYQGMRHYQPGDDKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

9) pipD in NC_016857


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  618 bits (2336),  Expect = 2e-178, Method: Compositional matrix adjust.
 Identities = 377/381 (99%), Positives = 379/381 (99%), Gaps = 0/381 (0%)

Query  32   MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPIAFHQ  91
            MKKYLAFAVTLLGMGKVIACTTL+VGNQASADGSFIIARNEDGSANNAKHKVIHP+AFHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  92   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  151
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  152  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  211
            AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  212  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  271
            ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  272  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSEGETFPVFLTPITKISVAAVKN  331
            FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVS GETFPVFLTPITKISVAAVKN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  332  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  391
            ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  392  SVYLPYYQGMRHYQPGDDKGT  412
            SVYLPYYQGMRHYQPGDDKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

10) STBHUCCB_19420 in NC_016832


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  618 bits (2334),  Expect = 2e-178, Method: Compositional matrix adjust.
 Identities = 377/381 (99%), Positives = 379/381 (99%), Gaps = 0/381 (0%)

Query  32   MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  91
            MKKYLAFAVTLLGMGKVIACTTL+VGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  92   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  151
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  152  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  211
            AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  212  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  271
            ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  272  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSEGETFSVFLTPITKISVAAVKN  331
            FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVS GETF+VFLTPITKISVAAVKN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  332  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  391
            ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  392  SVYLPYYQGMRHYQPGDDKGT  412
            SVYLPYYQGMRHYQPGDDKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

11) TY21A_09290 in NC_021176


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  618 bits (2334),  Expect = 2e-178, Method: Compositional matrix adjust.
 Identities = 377/381 (99%), Positives = 379/381 (99%), Gaps = 0/381 (0%)

Query  32   MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  91
            MKKYLAFAVTLLGMGKVIACTTL+VGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  92   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  151
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  152  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  211
            AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  212  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  271
            ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  272  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSEGETFSVFLTPITKISVAAVKN  331
            FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVS GETF+VFLTPITKISVAAVKN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  332  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  391
            ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  392  SVYLPYYQGMRHYQPGDDKGT  412
            SVYLPYYQGMRHYQPGDDKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

12) SE451236_11320 in NC_021820


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  617 bits (2332),  Expect = 3e-178, Method: Compositional matrix adjust.
 Identities = 377/381 (99%), Positives = 379/381 (99%), Gaps = 0/381 (0%)

Query  9    MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPIAFHQ  68
            MKKYLAFAVTLLGMGKVIACTTL+VGNQASADGSFIIARNEDGSANNAKHKVIHP+AFHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  69   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  128
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  129  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  188
            AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  189  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  248
            ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  249  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSEGETFPVFLTPITKISVAAVKN  308
            FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVS GETFPVFLTPITKISVAAVKN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  309  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  368
            ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  369  SVYLPYYQGMRHYQPGDDKGT  389
            SVYLPYYQGMRHYQPGDDKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

13) SEEH1578_14695 in NC_021810


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  617 bits (2332),  Expect = 3e-178, Method: Compositional matrix adjust.
 Identities = 377/381 (99%), Positives = 379/381 (99%), Gaps = 0/381 (0%)

Query  1    MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPIAFHQ  60
            MKKYLAFAVTLLGMGKVIACTTL+VGNQASADGSFIIARNEDGSANNAKHKVIHP+AFHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180
            AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240
            ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSEGETFPVFLTPITKISVAAVKN  300
            FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVS GETFPVFLTPITKISVAAVKN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360
            ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  361  SVYLPYYQGMRHYQPGDDKGT  381
            SVYLPYYQGMRHYQPGDDKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

14) CFSAN002069_03550 in NC_021812


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  617 bits (2332),  Expect = 3e-178, Method: Compositional matrix adjust.
 Identities = 377/381 (99%), Positives = 379/381 (99%), Gaps = 0/381 (0%)

Query  1    MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPIAFHQ  60
            MKKYLAFAVTLLGMGKVIACTTL+VGNQASADGSFIIARNEDGSANNAKHKVIHP+AFHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180
            AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240
            ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSEGETFPVFLTPITKISVAAVKN  300
            FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVS GETFPVFLTPITKISVAAVKN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360
            ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  361  SVYLPYYQGMRHYQPGDDKGT  381
            SVYLPYYQGMRHYQPGDDKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

15) pipD in NC_003197


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  617 bits (2332),  Expect = 3e-178, Method: Compositional matrix adjust.
 Identities = 377/381 (99%), Positives = 379/381 (99%), Gaps = 0/381 (0%)

Query  1    MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPIAFHQ  60
            MKKYLAFAVTLLGMGKVIACTTL+VGNQASADGSFIIARNEDGSANNAKHKVIHP+AFHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180
            AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240
            ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSEGETFPVFLTPITKISVAAVKN  300
            FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVS GETFPVFLTPITKISVAAVKN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360
            ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  361  SVYLPYYQGMRHYQPGDDKGT  381
            SVYLPYYQGMRHYQPGDDKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

16) pipD in NC_016810


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  617 bits (2332),  Expect = 3e-178, Method: Compositional matrix adjust.
 Identities = 377/381 (99%), Positives = 379/381 (99%), Gaps = 0/381 (0%)

Query  1    MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPIAFHQ  60
            MKKYLAFAVTLLGMGKVIACTTL+VGNQASADGSFIIARNEDGSANNAKHKVIHP+AFHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180
            AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240
            ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSEGETFPVFLTPITKISVAAVKN  300
            FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVS GETFPVFLTPITKISVAAVKN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360
            ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  361  SVYLPYYQGMRHYQPGDDKGT  381
            SVYLPYYQGMRHYQPGDDKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

17) STMDT12_C11130 in NC_016860


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  617 bits (2332),  Expect = 3e-178, Method: Compositional matrix adjust.
 Identities = 377/381 (99%), Positives = 379/381 (99%), Gaps = 0/381 (0%)

Query  1    MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPIAFHQ  60
            MKKYLAFAVTLLGMGKVIACTTL+VGNQASADGSFIIARNEDGSANNAKHKVIHP+AFHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180
            AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240
            ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSEGETFPVFLTPITKISVAAVKN  300
            FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVS GETFPVFLTPITKISVAAVKN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360
            ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  361  SVYLPYYQGMRHYQPGDDKGT  381
            SVYLPYYQGMRHYQPGDDKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

18) pipD in NC_016863


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  617 bits (2332),  Expect = 3e-178, Method: Compositional matrix adjust.
 Identities = 377/381 (99%), Positives = 379/381 (99%), Gaps = 0/381 (0%)

Query  1    MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPIAFHQ  60
            MKKYLAFAVTLLGMGKVIACTTL+VGNQASADGSFIIARNEDGSANNAKHKVIHP+AFHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180
            AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240
            ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSEGETFPVFLTPITKISVAAVKN  300
            FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVS GETFPVFLTPITKISVAAVKN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360
            ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  361  SVYLPYYQGMRHYQPGDDKGT  381
            SVYLPYYQGMRHYQPGDDKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

19) CFSAN001921_11705 in NC_021814


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  617 bits (2332),  Expect = 3e-178, Method: Compositional matrix adjust.
 Identities = 377/381 (99%), Positives = 379/381 (99%), Gaps = 0/381 (0%)

Query  9    MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPIAFHQ  68
            MKKYLAFAVTLLGMGKVIACTTL+VGNQASADGSFIIARNEDGSANNAKHKVIHP+AFHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  69   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  128
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  129  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  188
            AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  189  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  248
            ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  249  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSEGETFPVFLTPITKISVAAVKN  308
            FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVS GETFPVFLTPITKISVAAVKN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  309  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  368
            ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  369  SVYLPYYQGMRHYQPGDDKGT  389
            SVYLPYYQGMRHYQPGDDKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

20) STU288_01800 in NC_021151


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  617 bits (2332),  Expect = 4e-178, Method: Compositional matrix adjust.
 Identities = 377/381 (99%), Positives = 379/381 (99%), Gaps = 0/381 (0%)

Query  1    MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPIAFHQ  60
            MKKYLAFAVTLLGMGKVIACTTL+VGNQASADGSFIIARNEDGSANNAKHKVIHP+AFHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180
            AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240
            ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSEGETFPVFLTPITKISVAAVKN  300
            FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVS GETFPVFLTPITKISVAAVKN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360
            ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  361  SVYLPYYQGMRHYQPGDDKGT  381
            SVYLPYYQGMRHYQPGDDKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

21) SEEB0189_14100 in NC_021844


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  616 bits (2329),  Expect = 6e-178, Method: Compositional matrix adjust.
 Identities = 377/381 (99%), Positives = 378/381 (99%), Gaps = 0/381 (0%)

Query  1    MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60
            MKKYLAFAVTLLGMGKVIACTTL+VGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180
            AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240
            ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSEGETFPVFLTPIKKISVAAVKN  300
            FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVS GETFPVFLTPI KISVAAVKN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360
            ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  361  SVYLPYYQGMRHYQPGDDKGT  381
            SVYLPYYQGMRHYQPGDDKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

22) SeAg_B1053 in NC_011149


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  616 bits (2328),  Expect = 7e-178, Method: Compositional matrix adjust.
 Identities = 377/381 (99%), Positives = 379/381 (99%), Gaps = 0/381 (0%)

Query  1    MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60
            MKKYLAFAVTLLGMGKVIACTTL+VGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180
            AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASSTLVSFAKKQGLYDPARGE  240
            ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMAS+TLVSFAKKQGLYDPARGE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSEGETFPVFLTPITKISVAAVKN  300
            FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVS GETFPVFLTPITKISVAAVKN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360
            ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  361  SVYLPYYQGMRHYQPGDDKGT  381
            SVYLPYYQGMRHYQPGDDKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

23) pipD in NC_011294


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  616 bits (2328),  Expect = 7e-178, Method: Compositional matrix adjust.
 Identities = 377/381 (99%), Positives = 378/381 (99%), Gaps = 0/381 (0%)

Query  1    MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60
            MKKYLAFAVTLLGMGKVIACTTL+VGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180
            AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240
            ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTAVSEGETFPVFLTPITKISVAAVKN  300
            FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDT VS GETFPVFLTPITKISVAAVKN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360
            ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  361  SVYLPYYQGMRHYQPGDDKGT  381
            SVYLPYYQGMRHYQPGDDKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

24) CFSAN001992_06175 in NC_020307


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  616 bits (2328),  Expect = 7e-178, Method: Compositional matrix adjust.
 Identities = 377/381 (99%), Positives = 378/381 (99%), Gaps = 0/381 (0%)

Query  1    MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60
            MKKYLAFAVTLLGMGKVIACTTL+VGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180
            AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240
            ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTAVSEGETFPVFLTPITKISVAAVKN  300
            FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDT VS GETFPVFLTPITKISVAAVKN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360
            ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  361  SVYLPYYQGMRHYQPGDDKGT  381
            SVYLPYYQGMRHYQPGDDKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

25) CFSAN002050_11865 in NC_021818


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  616 bits (2327),  Expect = 8e-178, Method: Compositional matrix adjust.
 Identities = 377/381 (99%), Positives = 378/381 (99%), Gaps = 0/381 (0%)

Query  1    MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60
            MKKYLAFAVTLLGMGKVIACTTL+VGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180
            AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240
            ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSEGKTFPVFLTPITKISVAAVKN  300
            FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVS G TFPVFLTPITKISVAAVKN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360
            ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  361  SVYLPYYQGMRHYQPGDDKGT  381
            SVYLPYYQGMRHYQPGDDKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

26) SNSL254_A1189 in NC_011080


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  616 bits (2328),  Expect = 8e-178, Method: Compositional matrix adjust.
 Identities = 375/381 (99%), Positives = 377/381 (99%), Gaps = 0/381 (0%)

Query  32   MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPIAFHQ  91
            MKKYLAFAVTLLGMGKVIACTTL+VGNQASADGSFIIARNEDGSANNAKHKVIHP+AFHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  92   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  151
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  152  AADPYVTKTGITEDAIESAILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  211
            AADPYVTKTGITEDAIES ILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  212  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  271
            ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  272  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTAVSEGETFPVFLTPITKISVAAVKN  331
            FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDT VS GETFPVFLTPITKISVAAVKN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  332  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  391
            ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  392  SVYLPYYQGMRHYQPGDDKGT  412
            SVYLPYYQGMRHYQPGDDKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

27) SN31241_21610 in NC_021902


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  616 bits (2328),  Expect = 8e-178, Method: Compositional matrix adjust.
 Identities = 375/381 (99%), Positives = 377/381 (99%), Gaps = 0/381 (0%)

Query  32   MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPIAFHQ  91
            MKKYLAFAVTLLGMGKVIACTTL+VGNQASADGSFIIARNEDGSANNAKHKVIHP+AFHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  92   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  151
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  152  AADPYVTKTGITEDAIESAILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  211
            AADPYVTKTGITEDAIES ILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  212  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  271
            ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  272  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTAVSEGETFPVFLTPITKISVAAVKN  331
            FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDT VS GETFPVFLTPITKISVAAVKN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  332  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  391
            ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  392  SVYLPYYQGMRHYQPGDDKGT  412
            SVYLPYYQGMRHYQPGDDKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

28) pipD in NC_003198


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  616 bits (2327),  Expect = 8e-178, Method: Compositional matrix adjust.
 Identities = 377/381 (99%), Positives = 379/381 (99%), Gaps = 0/381 (0%)

Query  1    MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60
            MKKYLAFAVTLLGMGKVIACTTL+VGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180
            AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240
            ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSEGETFSVFLTPITKISVAAVKN  300
            FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVS GETF+VFLTPITKISVAAVKN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360
            ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  361  SVYLPYYQGMRHYQPGDDKGT  381
            SVYLPYYQGMRHYQPGDDKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

29) pipD in NC_004631


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  616 bits (2327),  Expect = 8e-178, Method: Compositional matrix adjust.
 Identities = 377/381 (99%), Positives = 379/381 (99%), Gaps = 0/381 (0%)

Query  1    MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60
            MKKYLAFAVTLLGMGKVIACTTL+VGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180
            AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240
            ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSEGETFSVFLTPITKISVAAVKN  300
            FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVS GETF+VFLTPITKISVAAVKN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360
            ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  361  SVYLPYYQGMRHYQPGDDKGT  381
            SVYLPYYQGMRHYQPGDDKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

30) pipD in NC_012125


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  616 bits (2326),  Expect = 9e-178, Method: Compositional matrix adjust.
 Identities = 376/381 (99%), Positives = 378/381 (99%), Gaps = 0/381 (0%)

Query  5    MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  64
            MKKYLAFAVTLLGMGKVIACTTL+VGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  65   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  124
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  125  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  184
            AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  185  ETGSGHQWLAVRLPTDSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  244
            ETGSGHQWLAVRLP+DSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  245  FDFHQAYSQDNKNDITYNYPRVWTLQHQFNPHLDTVVSEGETFPVFLTPITKISVAAVKN  304
            FDFHQAYSQDNKND TYNYPRVWTLQHQFNPHLDTVVS GETFPVFLTPITKISVAAVKN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  305  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  364
            ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  365  SVYLPYYQGMRHYQPGDDKGT  385
            SVYLPYYQGMRHYQPGDDKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

31) pipD in NC_011274


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  614 bits (2320),  Expect = 3e-177, Method: Compositional matrix adjust.
 Identities = 375/381 (99%), Positives = 378/381 (99%), Gaps = 0/381 (0%)

Query  1    MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60
            MKKYLAFAVTLLGMGKVIACTTL+VGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  121  AADPYVTKTGITEDTIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180
            AADPYVTKTGITED+IESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240
            ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTAVSEGETFPVFLTPITKISVAAVKN  300
            FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDT VS GETFPVFLTPITKISVAAVKN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  301  ALRNNYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360
            ALRN+YQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  361  SVYLPYYQGMRHYQPGDDKGT  381
            SVYLPYYQGMRHYQPGDDKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

32) pipD in NC_016831


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  614 bits (2321),  Expect = 3e-177, Method: Compositional matrix adjust.
 Identities = 375/381 (99%), Positives = 377/381 (99%), Gaps = 0/381 (0%)

Query  32   MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  91
            MKKYLAFAVTLLGMGKVIACTTL+VGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  92   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  151
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  152  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  211
            AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  212  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  271
            ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  272  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTAVSEVETFPVFLTPITKISVAAVKN  331
            FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDT VS  ETFPVFLTPITKISVAAVKN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  332  ALRNNYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  391
            ALRN+YQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  392  SVYLPYYQGMRHYQPGDDKGT  412
            SVYLPYYQGMRHYQPGDDKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

33) pipD in NC_022221


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  614 bits (2319),  Expect = 4e-177, Method: Compositional matrix adjust.
 Identities = 374/381 (99%), Positives = 376/381 (99%), Gaps = 0/381 (0%)

Query  32   MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  91
            MKKYLAFAVTLLGMGKVIACTTL+VGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  92   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  151
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  152  AADPYVTKTGITEDAIESVILPVAQSARQGVKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  211
            AADPYVTKTGITEDAIESVILPVAQSARQG KLLGDIIEQKGAGEGFGVAFIDSKEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  212  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  271
            ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  272  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTAVSEVETFPVFLTPITKISVAAVKN  331
            FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDT VS  ETFPVFLTPITKISVAAVKN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  332  ALRNNYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  391
            ALRN+YQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  392  SVYLPYYQGMRHYQPGDDKGT  412
            SVYLPYYQGMRHYQPGDDKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

34) I137_08925 in NC_021984


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  612 bits (2314),  Expect = 9e-177, Method: Compositional matrix adjust.
 Identities = 375/381 (99%), Positives = 377/381 (99%), Gaps = 0/381 (0%)

Query  1    MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60
            MKKYLAFAVTLLGMGKVIACTTL+VGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180
            AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240
            ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTAVSEVETFPVFLTPITKISVAAVKN  300
            FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDT VS  ETFPVFLTPITKISVAAVKN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  301  ALRNNYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360
            ALRN+YQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  361  SVYLPYYQGMRHYQPGDDKGT  381
            SVYLPYYQGMRHYQPGDDKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

35) SARI_01909 in NC_010067


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  583 bits (2202),  Expect = 6e-168, Method: Compositional matrix adjust.
 Identities = 346/381 (91%), Positives = 369/381 (97%), Gaps = 0/381 (0%)

Query  1    MKLYFAFAVTLLGLGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHMVIHPISFHQ  60
            MK Y+AFAVTLLG+GKVIACTTL+VGNQASADGSFIIARNEDGSANNAKH VIHP++FHQ
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGSAAL  120
            QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNG AAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  121  AADPYVTKTGITEDAIQTVILPVAHSARQGAKLLGDIIEQKGAGEGFGVAFIDTKEIWYL  180
            AADPYVTKTGITEDAI++VILPVA+SARQGAKLLGDIIEQKGAGEGFGVAFID+KEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  181  ETGSGHQWLAVRLPADKYFVSANQGRLRRYDPNDKANYMASPTLVSFAKKQGLYDPAHGE  240
            ETGSGHQWLAVRLPAD YFVSANQGRLR+YDPND+ANYMASPTLVSFAKKQGLYDPA+GE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  241  FDFHQAYSQDNKIDITYNYPRVWTLQHRFNPHLDTAVSKGETFPVFLTPMTKINLEAIKN  300
            FDFHQAYSQDNK D TYNYPRVWTLQH+FNPHLDT VS GETFPVFLTP+TKI++ A+KN
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  301  ALRNHYQGTPHDPYANHHPQEPWRPISVFRTQESHILQVRPGLPQAVGEVEYVAYGMPSL  360
            ALRNHYQGT+HDPYA+H+PQEPWRPISVFRTQESHILQVRP LPQA+G+VEY+AYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  361  SVYLPYYQGMRHYQPGYDKGT  381
            SVYLPYYQGMRHYQPG DKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

36) pipD in NC_015761


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  556 bits (2099),  Expect = 1e-159, Method: Compositional matrix adjust.
 Identities = 328/381 (87%), Positives = 361/381 (95%), Gaps = 0/381 (0%)

Query  1    MKMYFASAITLLNMSKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHMVIHPVSFNQ  60
            MK Y+A A+TLL M+KVIACTTL+VGNQASADGSFIIARNEDGSANNAKH VIHPV+F+Q
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  61   QGEFKAHRNDFSWPLPEMAMRYTAIHDFDTDDNSMGEAGFNSAGVGMSATETIYNGRTAL  120
            QGE+KAHRN+FSWPLPE AMRYTAIHDFDT+DN+MGEAGFNSAGVGMSATETIYNGR+AL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  121  AADPYVTKMGITEDAIQTVILPVAQSARQGARLLGNIIEQKGAGEGFGVAFIDTKEIWYL  180
            AADPYVTK GITEDAI++VILPVAQSARQGA+LLG+IIEQKGAGEGFGVAFID+KEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  181  ETGSGHQWLAVRLPADKYFVSANQGRLHRYDPHDKANYMASPSLISFAEQQGLYDPAQGE  240
            ETGSGHQWLAVRLPAD YFVSANQGRL++YDP+D+ANYMASP+L+SFA +QGLYDPA+GE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  241  FDFHQAYSQDSKIDVTYNYPRVWTLQHQFNPHQDTAVSEGETFPVFLTPMAKISVAAVQN  300
            FDFHQAYSQD+K D TYNYPRVWTLQHQFNPH DT VS GETFPVFLTP++KISVAAV+N
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  301  ALRNHYQGTPHDPYTHDRPQEPWRPISVFRTQESHILQVRPGLPQAIGEVEYVAYGMPSL  360
            ALRNHYQGT+HDPY+ + PQEPWRPISVFRTQESHILQVRP LPQAIG+VEY+AYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  361  SVYLPYYQGTCHYQPGYDKGT  381
            SVYLPYYQG  HYQPG DKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

37) A464_1033 in NC_021870


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  556 bits (2099),  Expect = 9e-160, Method: Compositional matrix adjust.
 Identities = 328/381 (87%), Positives = 361/381 (95%), Gaps = 0/381 (0%)

Query  1    MKMCFASAITLLNMSKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHMVIHPVSFNQ  60
            MK  +A A+TLL M+KVIACTTL+VGNQASADGSFIIARNEDGSANNAKH VIHPV+F+Q
Sbjct  1    MKKYLAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  61   QGEFKAHRNDFSWPLPEMAMRYTAIHDFDTDDNSMGEAGFNSAGVGMSATETIYNGRAAL  120
            QGE+KAHRN+FSWPLPE AMRYTAIHDFDT+DN+MGEAGFNSAGVGMSATETIYNGRAAL
Sbjct  61   QGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  121  AADPYVTKTGITEDAIQTVILPVAQSARQGARLLGNIIEQKGAGEGFGVAFIDTKEIWYL  180
            AADPYVTKTGITEDAI++VILPVAQSARQGA+LLG+IIEQKGAGEGFGVAFID+KEIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  181  ETGSGHQWLAVRLPADKYFVSANQGRLHRYDPHDKTNYMASPSLISFAEQQGLYDPAQGE  240
            ETGSGHQWLAVRLPAD YFVSANQGRL++YDP+D++NYMASP+L+SFA +QGLYDPA+GE
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE  240

Query  241  FDFHQAYSQDSKIDVTYNYPRVWTLQHQFNPYLDTAVSEGGTFPVFLTPMAKISVAAVQN  300
            FDFHQAYSQD+K D TYNYPRVWTLQHQFNP LDT VS G TFPVFLTP++KISVAAV+N
Sbjct  241  FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKN  300

Query  301  ALRNHYQGTPHDPYTHDRPQEPWRPISVFRTQESHILQVRPGLPQAIGEVEYVAYGMPSL  360
            ALRNHYQGT+HDPY+ + PQEPWRPISVFRTQESHILQVRP LPQAIG+VEY+AYGMPSL
Sbjct  301  ALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSL  360

Query  361  SVYLPYYQGTRHYQPGYDKGT  381
            SVYLPYYQG RHYQPG DKG 
Sbjct  361  SVYLPYYQGMRHYQPGDDKGP  381

38) ETAC_11150 in NC_020796


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  474 bits (1787),  Expect = 4e-135, Method: Compositional matrix adjust.
 Identities = 266/368 (73%), Positives = 322/368 (88%), Gaps = 0/368 (0%)

Query  15   VGQAMACTTILVGNQATTDGSFIAARNEDYSANNAKHMVIHPAAHNQHGVFKSHGNDFTY  74
            +G+ +ACTT++VGNQA++DGSFI ARNED SANNAKH VIHP A +Q+G +K+H N+F+ 
Sbjct  14   MGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQQGEYKAHRNNFSW  73

Query  75   PLPKEALRYTAIHDFDTQDKSMGEAGFNAAGVGMTATETIYNGQPALKADPYVEKTGITE  134
            PLP  A+RYTAIHDFDT+D++MGEAGFN+AGVGM+ATETIYNG++AL ADPYV KTGITE
Sbjct  74   PLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAALAADPYVTKTGITE  133

Query  135  DAIQTVVLPRIHSAREGVELLGKIIEQKGAGEGFGVAFVDQHDLWYLETGSGHQWMATRL  194
            DAI++V+LP  +SAR+G  LLG IIEQKGAGEGFGVAF+D  ++WYLETGSGHQW+A RL
Sbjct  134  DAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYLETGSGHQWLAVRL  193

Query  195  PADKYLVSANQGRLRQYDPKDTANYLGSPTLISFAEQHGLYNPKDGAFDFHKAYSQDVEN  254
            PAD Y+VSANQGRLR+YDP+D ANY++SPTL+SFA ++GLY+P  G FDFH+AYSQD  N
Sbjct  194  PADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGEFDFHQAYSQDNKN  253

Query  255  DVTYNYPRVWTLQHMFNPQLKTTITDGKNFPVFLTPAKKISIADVEQALRNHYQGTAHDP  314
            D TYNYPRVWTLQH FNP+L T ++ G  FPVFLTP  KIS+A V +ALRNHYQGT+HDP
Sbjct  254  DTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKNALRNHYQGTSHDP  313

Query  315  YANNNPQEPYRPISVFRTQESHILQVRPHLPTAIGEVEYVAFGMSALSVYVPYYQGIEHY  374
            YA++NPQEP RPISVFRTQESHILQVRP LP AIG+VEY+A+GM++LSVY+PYYQG+ HY
Sbjct  314  YASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSLSVYLPYYQGMRHY  373

Query  375  LPGYDKGS  382
             PG DKG+
Sbjct  374  QPGDDKGP  381

39) ETAE_2361 in NC_013508


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  474 bits (1787),  Expect = 4e-135, Method: Compositional matrix adjust.
 Identities = 266/368 (73%), Positives = 322/368 (88%), Gaps = 0/368 (0%)

Query  15   VGQAMACTTILVGNQATTDGSFIAARNEDYSANNAKHMVIHPAAHNQHGVFKSHGNDFTY  74
            +G+ +ACTT++VGNQA++DGSFI ARNED SANNAKH VIHP A +Q+G +K+H N+F+ 
Sbjct  14   MGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQQGEYKAHRNNFSW  73

Query  75   PLPKEALRYTAIHDFDTQDKSMGEAGFNAAGVGMTATETIYNGQPALKADPYVEKTGITE  134
            PLP  A+RYTAIHDFDT+D++MGEAGFN+AGVGM+ATETIYNG++AL ADPYV KTGITE
Sbjct  74   PLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAALAADPYVTKTGITE  133

Query  135  DAIQTVVLPRIHSAREGVELLGKIIEQKGAGEGFGVAFVDQHDLWYLETGSGHQWMATRL  194
            DAI++V+LP  +SAR+G  LLG IIEQKGAGEGFGVAF+D  ++WYLETGSGHQW+A RL
Sbjct  134  DAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYLETGSGHQWLAVRL  193

Query  195  PADKYLVSANQGRLRQYDPKDTANYLGSPTLISFAEQHGLYNPKDGAFDFHKAYSQDVEN  254
            PAD Y+VSANQGRLR+YDP+D ANY++SPTL+SFA ++GLY+P  G FDFH+AYSQD  N
Sbjct  194  PADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGEFDFHQAYSQDNKN  253

Query  255  DVTYNYPRVWTLQHMFNPQLKTTITDGKNFPVFLTPAKKISIADVEQALRNHYQGTAHDP  314
            D TYNYPRVWTLQH FNP+L T ++ G  FPVFLTP  KIS+A V +ALRNHYQGT+HDP
Sbjct  254  DTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKNALRNHYQGTSHDP  313

Query  315  YANNNPQEPYRPISVFRTQESHILQVRPHLPTAIGEVEYVAFGMSALSVYVPYYQGIEHY  374
            YA++NPQEP RPISVFRTQESHILQVRP LP AIG+VEY+A+GM++LSVY+PYYQG+ HY
Sbjct  314  YASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSLSVYLPYYQGMRHY  373

Query  375  LPGYDKGS  382
             PG DKG+
Sbjct  374  QPGDDKGP  381

40) ETAF_2133 in NC_017309


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  474 bits (1787),  Expect = 4e-135, Method: Compositional matrix adjust.
 Identities = 266/368 (73%), Positives = 322/368 (88%), Gaps = 0/368 (0%)

Query  15   VGQAMACTTILVGNQATTDGSFIAARNEDYSANNAKHMVIHPAAHNQHGVFKSHGNDFTY  74
            +G+ +ACTT++VGNQA++DGSFI ARNED SANNAKH VIHP A +Q+G +K+H N+F+ 
Sbjct  14   MGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQQGEYKAHRNNFSW  73

Query  75   PLPKEALRYTAIHDFDTQDKSMGEAGFNAAGVGMTATETIYNGQPALKADPYVEKTGITE  134
            PLP  A+RYTAIHDFDT+D++MGEAGFN+AGVGM+ATETIYNG++AL ADPYV KTGITE
Sbjct  74   PLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAALAADPYVTKTGITE  133

Query  135  DAIQTVVLPRIHSAREGVELLGKIIEQKGAGEGFGVAFVDQHDLWYLETGSGHQWMATRL  194
            DAI++V+LP  +SAR+G  LLG IIEQKGAGEGFGVAF+D  ++WYLETGSGHQW+A RL
Sbjct  134  DAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYLETGSGHQWLAVRL  193

Query  195  PADKYLVSANQGRLRQYDPKDTANYLGSPTLISFAEQHGLYNPKDGAFDFHKAYSQDVEN  254
            PAD Y+VSANQGRLR+YDP+D ANY++SPTL+SFA ++GLY+P  G FDFH+AYSQD  N
Sbjct  194  PADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGEFDFHQAYSQDNKN  253

Query  255  DVTYNYPRVWTLQHMFNPQLKTTITDGKNFPVFLTPAKKISIADVEQALRNHYQGTAHDP  314
            D TYNYPRVWTLQH FNP+L T ++ G  FPVFLTP  KIS+A V +ALRNHYQGT+HDP
Sbjct  254  DTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKNALRNHYQGTSHDP  313

Query  315  YANNNPQEPYRPISVFRTQESHILQVRPHLPTAIGEVEYVAFGMSALSVYVPYYQGIEHY  374
            YA++NPQEP RPISVFRTQESHILQVRP LP AIG+VEY+A+GM++LSVY+PYYQG+ HY
Sbjct  314  YASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSLSVYLPYYQGMRHY  373

Query  375  LPGYDKGS  382
             PG DKG+
Sbjct  374  QPGDDKGP  381

41) NT01EI_2654 in NC_012779


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  471 bits (1776),  Expect = 3e-134, Method: Compositional matrix adjust.
 Identities = 265/374 (71%), Positives = 325/374 (87%), Gaps = 0/374 (0%)

Query  9    AIATLCVGQAMACTTILVGNQATTDGSFIAARNEDYSANNAKHMVIHPAAHNQHGVFKSH  68
            A++ L +G+ +ACTT++VGNQA++DGSFI ARNED SANNAKH VIHP A +Q+G +K+H
Sbjct  8    AVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQQGEYKAH  67

Query  69   GNDFTYPLPKEALRYTAIHDFDTQDKSMGEAGFNSAGVGMTATETLYNGQPALKADPYVE  128
             N+F+ PLP  A+RYTAIHDFDT+D++MGEAGFNSAGVGM+ATET+YNG++AL ADPYV 
Sbjct  68   RNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAALAADPYVT  127

Query  129  KTGITEDAIQTVVLPRIHSAREGVELLGKIIEQQGAGEGFGVAFVDQHDLWYLETGSGHQ  188
            KTGITEDAI++V+LP  +SAR+G  LLG IIEQ+GAGEGFGVAF+D  ++WYLETGSGHQ
Sbjct  128  KTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYLETGSGHQ  187

Query  189  WMATRLPADKYLISANQGRLRQYDPKDTANYLGSPTLISFAEQHGLYRPKDGAFDFHKAY  248
            W+A RLPAD Y++SANQGRLR+YDP+D ANY++SPTL+SFA ++GLY P  G FDFH+AY
Sbjct  188  WLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGEFDFHQAY  247

Query  249  SQDVENDVTYNYPRVWTLQHMFNPQLKTTITDGKNFPVFLTPAKKISIADVELALRNHYQ  308
            SQD  ND TYNYPRVWTLQH FNP+L T ++ G  FPVFLTP  KIS+A V  ALRNHYQ
Sbjct  248  SQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKNALRNHYQ  307

Query  309  GTTHDPYANNNPKEPYRPISVFRTQESHILQVRPHLPKAIGEVEYVAFGMSALSVYIPYY  368
            GT+HDPYA++NP+EP RPISVFRTQESHILQVRP LP+AIG+VEY+A+GM++LSVY+PYY
Sbjct  308  GTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSLSVYLPYY  367

Query  369  QGIEHYLPGYDKGS  382
            QG+ HY PG DKG+
Sbjct  368  QGMRHYQPGDDKGP  381

42) EBL_c34440 in NC_017910


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  463 bits (1743),  Expect = 1e-131, Method: Compositional matrix adjust.
 Identities = 260/380 (69%), Positives = 314/380 (83%), Gaps = 8/380 (2%)

Query  29   QASADGSYIVARNEDYAADNAKHMVIHPAAHNQQGVFKSHANDFTWPLPKEALRYTAIHD  88
            QASADGS+I+ARNED +A+NAKH VIHP A +QQG +K+H N+F+WPLP  A+RYTAIHD
Sbjct  28   QASADGSFIIARNEDGSANNAKHKVIHPVAFHQQGEYKAHRNNFSWPLPETAMRYTAIHD  87

Query  89   FDTAGKSMGEVGFNGAGVGLTSTETIYNGAAALKADPYVEKTGITEDAIQTVVLPYIHSA  148
            FDT +++MGE GFN+AGVG+++TETIYNG AAL ADPYV KTGITEDAI++V+LP  +SA
Sbjct  88   FDTNDNAMGEAGFNSAGVGMSATETIYNGRAALAADPYVTKTGITEDAIESVILPVAQSA  147

Query  149  REGVELLGKIIEQKGAGEGFGVAFVDAKDVWYLESGSGHQWMAARLPNDRYFVSANQGRL  208
            R+G  LLG IIEQKGAGEGFGVAF+D+K++WYLE+GSGHQW+A RLP D YFVSANQGRL
Sbjct  148  RQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYLETGSGHQWLAVRLPADSYFVSANQGRL  207

Query  209  QHYDAKDTANYLASPTLVSFAREHGLYHPESGEFNFHTAYSQDVPNDVTYNYPRVWTLQH  268
            +HYD++D ANY+ASPTLVSFA+ +GLY+P  GEF+FH AYSQD  ND TYNYPRVWTLQH
Sbjct  208  RHYDPNDNANYMASPTLVSFAKKQGLYDPARGEFDFHQAYSQDNKNDTTYNYPRVWTLQH  267

Query  269  KFNPGLTTTVEQGKAFPVFVKPASKISVNDVKQALRNHYDGTAHDPYTKVNPKEPWRPIS  328
            +FNP L T V  G +FPVF+ P +KISV  VK+ALRNHY+GT+HDPY+  NP+EPWRPIS
Sbjct  268  QFNPHLDTVVSPGETFPVFLTPITKISVAAVKNALRNHYQGTSHDPYASHNPQEPWRPIS  327

Query  329  VFRTQESHILQVRPNLPAAIGEVEYVAYGMSALGVYVPYYQGISHYLPGYDKG-------  381
            VFRTQESHILQVRP+LP AIG+VEY+AYGM++L+VY+PYYQG+ HY PG DKG       
Sbjct  328  VFRTQESHILQVRPKLPQAIGNVEYIAYGMPSLSVYLPYYQGMRHYQPGDDKGPIGRATT  387

Query  382  -TDTASSDSVNWKYRTLQTL  400
                 S+    W  RT   L
Sbjct  388  LPTGHSARCKRWLCRTTMRL  407

43) PMI0803 in NC_010554


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  339 bits (1274),  Expect = 1e-94, Method: Compositional matrix adjust.
 Identities = 195/386 (51%), Positives = 281/386 (73%), Gaps = 13/386 (3%)

Query  13   IALSINIALVSSALACTTLLAGSEATNDGSLIVARSADSDALKAQHFVIHPAKNNQTGIY  72
            +A+++ +  ++  +ACTTL+ G++A+ DGS+I+AR+ D+ A +A+H VIHP   +Q G Y
Sbjct  5    LAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQQGEY  64

Query  73   STQAHHGANSFTYPLPKHSLRYTTVPNWKTQLH--GATGFNELGVGVSGTESIFASPKAL  130
             ++     N+F+ PLP  ++RYT++ +  T+ +  G +GFN  GVG+S+TE+I+ +  AL
Sbjct  65   KAHR----NNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  131  AFDPYVEDTGITEDDIPDILLSRAKTAREAIELLGNIIETQGAGEGFGVAVVDKNEVWYL  190
            A DPYV  TGITED I  ++L+ A++AR++  LLG+IIE +GAGEGFGVA +D +E+WYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  191  ETGTGHQWMAQKLPKDKYFATGNQGRLQAYHTDSNDN-LGSKNLVEFAIEKGLYDPATDG  249
            ETG+GHQW+A +LP D YF ++NQGRL+ Y+ + N N ++S  LV FA  +GLYDPA  G
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPAR-G  239

Query  250  EFNFSKAYTRDDERDLTYNYPRVWVIQQQFNPSLKQNVADGRQFAPMLTPEKKVSVEDAK  309
            EF+F +AY++D+  D TYNYPRVW +Q+QFNP L   V+ G  F+  LTP  K+SV   K
Sbjct  240  EFDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVK  299

Query  310  AMLRNHFDGTEHDPYTNGLNGNEPWRPISVFRTYESHVMQVRPELPQEIGEVTYVGLGMA  369
              LRNH++GT HDPY+ + N +EPWRPISVFRT ESH++QVRP LPQ IG+V Y++ GM+
Sbjct  300  NALRNHYQGTSHDPYA-SHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMP  358

Query  370  DLTAFVPYYSGLKAYPQHYAIGTDKA  395
             L+ ++PYY G++    HY  G DK+
Sbjct  359  SLSVYLPYYQGMR----HYQPGDDKG  380

44) BB2000_0871 in NC_022000


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  339 bits (1273),  Expect = 2e-94, Method: Compositional matrix adjust.
 Identities = 196/386 (51%), Positives = 281/386 (73%), Gaps = 13/386 (3%)

Query  9    IALSINIALVSSALACTTLLAGSEATNDGSLIVARSADSDALKAQHFVIHPAKSNQTGIY  68
            +A+++ +  ++  +ACTTL+ G++A+ DGS+I+AR+ D+ A +A+H VIHP   +Q G Y
Sbjct  5    LAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQQGEY  64

Query  69   STQAHHGANNFTYPLPKHSLRYTTVPNWKTQLH--GATGFNELGVGVSGTESIFASPKAL  126
             ++     NNF+ PLP  ++RYT++ +  T+ +  G +GFN  GVG+S+TE+I+ +  AL
Sbjct  65   KAHR----NNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  127  AFDPYVEDTGITEDDIPDILLSRAKTAREAIELLGNIIETQGAGEGFGVAVVDKNEVWYL  186
            A DPYV  TGITED I  ++L+ A++AR++  LLG+IIE +GAGEGFGVA +D +E+WYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  187  ETGTGHQWMAQKLPKDKYFATGNQGRLQAYHIDSNDN-LGSKNLVEFAIEKGLYDPATDG  245
            ETG+GHQW+A +LP D YF ++NQGRL+ Y+ + N N ++S  LV FA  +GLYDPA  G
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPAR-G  239

Query  246  EFNFSKAYTRDDERDLTYNYPRVWVIQQQFNPSLKQNVADGRQFAPMLTPEKKVSVEDAK  305
            EF+F +AY++D+  D TYNYPRVW +Q+QFNP L   V+ G  F+  LTP  K+SV   K
Sbjct  240  EFDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVK  299

Query  306  AMLRNHFDGTEHDPYTNGLNGNEPWRPISVFRTYESHVMQVRPELPQEIGEVTYVGLGMA  365
              LRNH++GT HDPY+ + N +EPWRPISVFRT ESH++QVRP LPQ IG+V Y++ GM+
Sbjct  300  NALRNHYQGTSHDPYA-SHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMP  358

Query  366  DLTAFVPYYSGLKAYPQHYAIGTDKA  391
             L+ ++PYY G++    HY  G DK+
Sbjct  359  SLSVYLPYYQGMR----HYQPGDDKG  380

45) ASA_2511 in NC_009348


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  331 bits (1243),  Expect = 4e-92, Method: Compositional matrix adjust.
 Identities = 200/386 (52%), Positives = 279/386 (73%), Gaps = 13/386 (3%)

Query  9    VALSINLALFSSAFACTTLLVGSEASTDGSMMVARSADSDALKAQHFVIHPAKQGQSGVH  68
            +A+++ L   +  +ACTTL+VG++AS+DGS ++AR+ D+ A +A+H VIHP    Q G  
Sbjct  5    LAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQQGEY  64

Query  69   SSKAHNGANDFSYPLPKNALRYTTVPNWKTQLH--GATGFNEKGVGVSGTESIFASPEAL  126
              KAH   N+FS PLP  A+RYT++ +  T+ +  G +GFN  GVG+S+TE+I+ +  AL
Sbjct  65   --KAHR--NNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  127  AFDPYVEDKGITEDDIPDVLLSRATSAREAVALLGNIIETLGAGEGFGVAVVDDNELWYL  186
            A DPYV   GITED I  V+L+ A SAR++  LLG+IIE  GAGEGFGVA +D +E+WYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  187  ETATGHHWMAQRLPKDQYFASGNQGRLQHYDPK-SADMMGSKNLVEFATEKGLYQPQKDG  245
            ET++GH+W+A RLP D YF S+NQGRL+HYDP+ +A+ M+S  LV FA  +GLY+P + G
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPAR-G  239

Query  246  TFNFSKAYTRDDERDRTYNDPRVWTIQQMFNPSLKQTVDAGRQFPVTLTPEKKMTLEEVK  305
             F+F +AY++D+  D TYN PRVWT+Q+ FNP L   V +G  FPV LTP  K+++  VK
Sbjct  240  EFDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVK  299

Query  306  AVLRNHYDGTEHDPYGKGLNGQEPWRPISVFRTYEAHVMQVRPWMPREVGEVTYVGLGMA  365
              LRNHY+GT HDPY+ + N QEPWRPISVFRT E+H++QVRP +P+ +G+V Y++ GM+
Sbjct  300  NALRNHYQGTSHDPYA-SHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMP  358

Query  366  DLTAFVPYYSGLEAYPAHYALGSDKA  391
             L+ ++PYY G+     HY  G DK+
Sbjct  359  SLSVYLPYYQGMR----HYQPGDDKG  380

46) CCV52592_0344 in NC_009715


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  329 bits (1236),  Expect = 2e-91, Method: Compositional matrix adjust.
 Identities = 201/388 (52%), Positives = 278/388 (72%), Gaps = 13/388 (3%)

Query  4    KFLASAAVIGTLFCGSALACTTILVGNEASNDGSLLIARSADSKAIKAQLFLIHPKKINQ  63
            K+LA A  +  +  G  +ACTT++VGN+AS DGS++IAR+ D+ A +A+  +IHP  ++Q
Sbjct  3    KYLAFAVTLLGM--GKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQ  60

Query  64   SGTYSSKAHDGASDFTYPLPKDSMRYTTIAN--SHTKLHGAVGYNEAGVGISGTETIYAK  121
             G Y  KAH   ++F+ PLP  +MRYT+I +  ++ +  G  G+N AGVG+S+TETIY  
Sbjct  61   QGEY--KAHR--NNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNG  116

Query  122  DELLKIDPYNEATGITEDDIPDVILPRMKSAKEGVKLLGQIVESTGAGEGFGVVFVDKDE  181
               L  DPY   TGITED I  VILP  +SA++G KLLG+I+E  GAGEGFGV F+D  E
Sbjct  117  RAALAADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKE  176

Query  182  IWYFETGTGHQWMAVKLPKDEYFVSGNQGRLQNYK-ENDPNFMGSKNLINFAKEHGAYDP  240
            IWY+ETG+GHQW+AV+LP D YFVS+NQGRL++Y  ++++N+M+S  L++FAK +G YDP
Sbjct  177  IWYLETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDP  236

Query  241  SKDGEFHFGKAYTRNDERDVTYNYPRVFW-VQQMFNPSFKQDIADGPNFPVFMKPEKKLS  299
            ++ GEF+F +AY++++  D TYNYPRV W +Q+ FNP +   ++ G  FPVF+ P  K+S
Sbjct  237  AR-GEFDFHQAYSQDNKNDTTYNYPRV-WTLQHQFNPHLDTVVSPGETFPVFLTPITKIS  294

Query  300  VNDLKTVLRAHYDGTKYDPYVSKDEESGIYRAISVFRTYESHVMQVRPWLPQEIGRVTYV  359
            V  +K  LR HY+GT  DPY S + +    R+ISVFRT ESH++QVRP LPQ IG V Y+
Sbjct  295  VAAVKNALRNHYQGTSHDPYASHNPQEP-WRPISVFRTQESHILQVRPKLPQAIGNVEYI  353

Query  360  ALGMSDLSVYLPYYYGLDGFIDGYDKGS  387
            A GM+ LSVYLPYY G+  +  G DKG+
Sbjct  354  AYGMPSLSVYLPYYQGMRHYQPGDDKGP  381

47) SBG_1830 in NC_015761


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  328 bits (1232),  Expect = 3e-91, Method: Compositional matrix adjust.
 Identities = 195/378 (52%), Positives = 287/378 (76%), Gaps = 9/378 (2%)

Query  9    LALSINLAFISSGFSCTTLLVGNEASSDGSMIVARSADSDAMKAQHFIIHPARHNQTGMY  68
            LA+++ L  ++  ++CTTL+VGN+AS+DGS I+AR+ D+ A +A+H +IHP   +Q G Y
Sbjct  5    LAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQQGEY  64

Query  69   STKAHNGANDFTWPLPKESLRYTTVPNWKTQLH--GATGFNEAGVGVSGTESIFASPKAL  126
              KAH   N+F+WPLP  ++RYT++ +  T+ +  G +GFN AGVG+S+TE+I+ +  AL
Sbjct  65   --KAHR--NNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  127  AFDPYVEDKGITEDDIPDILLSQTKTAREAVALLGHIIETvgagegfgvavvDDNEIWYL  186
            A DPYV   GITED I  ++L+ +++AR++  LLG+IIE  GAGEGFGVA +D +EIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  187  ETATGHQWMAQRLPANQYFATGNQGRLQDYDPKD-PNVMGSKSLVTFATEKGLYHPQNEG  245
            ET++GHQW+A RLPA+ YF ++NQGRL++YDP+D +N M+S +LV+FA  +GLY+P   G
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPAR-G  239

Query  246  KFNFSKVYTRDDERDRTYNDPRVWTIQQQFNPSVKQDMTAGRHFPVFMTPEKKMTLDDVK  305
             F+F + Y++D+  D TYN PRVWT+Q+QFNP +   +++G  FPVF+TP  K+++  VK
Sbjct  240  EFDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVK  299

Query  306  DVLRNHYEGTKHDPYSNGLNGKEPWRPVSVFRTYEAHVMQVRPWLPKEIGEVTYIGLGMA  365
            + LRNHY+GT HDPY+ + N +EPWRP+SVFRT E+H++QVRP LP+ IG+V YI+ GM+
Sbjct  300  NALRNHYQGTSHDPYA-SHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMP  358

Query  366  DLTAFVPYYSGLKAYPAN  383
             L+ ++PYY G++ Y + 
Sbjct  359  SLSVYLPYYQGMRHYQPG  376

48) A464_2157 in NC_021870


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  328 bits (1232),  Expect = 3e-91, Method: Compositional matrix adjust.
 Identities = 195/378 (52%), Positives = 287/378 (76%), Gaps = 9/378 (2%)

Query  9    LALSINLAFISSGFSCTTLLVGNEASSDGSMIVARSADSDAMKAQHFIIHPARHNQTGMY  68
            LA+++ L  ++  ++CTTL+VGN+AS+DGS I+AR+ D+ A +A+H +IHP   +Q G Y
Sbjct  5    LAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQQGEY  64

Query  69   STKAHNGANDFTWPLPKESLRYTTVPNWKTQLH--GATGFNEAGVGVSGTESIFASPKAL  126
              KAH   N+F+WPLP  ++RYT++ +  T+ +  G +GFN AGVG+S+TE+I+ +  AL
Sbjct  65   --KAHR--NNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  127  AFDPYVEDKGITEDDIPDILLSQTKTAREAVALLGHIIETvgagegfgvavvDDNEIWYL  186
            A DPYV   GITED I  ++L+ +++AR++  LLG+IIE  GAGEGFGVA +D +EIWYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  187  ETATGHQWMAQRLPANQYFATGNQGRLQDYDPKD-PNVMGSKSLVTFATEKGLYHPQNEG  245
            ET++GHQW+A RLPA+ YF ++NQGRL++YDP+D +N M+S +LV+FA  +GLY+P   G
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPAR-G  239

Query  246  KFNFSKVYTRDDERDRTYNDPRVWTIQQQFNPSVKQDMTAGRHFPVFMTPEKKMTLDDVK  305
             F+F + Y++D+  D TYN PRVWT+Q+QFNP +   +++G  FPVF+TP  K+++  VK
Sbjct  240  EFDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVK  299

Query  306  DVLRNHYEGTKHDPYSNGLNGKEPWRPVSVFRTYEAHVMQVRPWLPKEIGEVTYIGLGMA  365
            + LRNHY+GT HDPY+ + N +EPWRP+SVFRT E+H++QVRP LP+ IG+V YI+ GM+
Sbjct  300  NALRNHYQGTSHDPYA-SHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMP  358

Query  366  DLTAFVPYYSGLKAYPAN  383
             L+ ++PYY G++ Y + 
Sbjct  359  SLSVYLPYYQGMRHYQPG  376

49) B565_1522 in NC_015424


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  328 bits (1230),  Expect = 5e-91, Method: Compositional matrix adjust.
 Identities = 193/386 (50%), Positives = 277/386 (72%), Gaps = 13/386 (3%)

Query  9    VALSINLALFSSAFACTTLLVGSEASADGSMMVARSADSDALKAQHFVIHPAKQGQSGMH  68
            +A+++ L   +  +ACTTL+VG++ASADGS ++AR+ D+ A +A+H VIHP    Q G  
Sbjct  5    LAFAVTLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQQGEY  64

Query  69   SSKAHNGANDFRYPLPKNSLRYTTVPNWKTQLH--GATGFNEKGVGVSGTESIFASPEAL  126
              KAH   N+F  PLP  ++RYT++ +  T+ +  G +GFN  GVG+S+TE+I+ +  AL
Sbjct  65   --KAHR--NNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAAL  120

Query  127  AFDPYVEEKGITEDDIPDVLLSGSTSAREAVALLGNIIETIGAGEGFGVAVVDDNELWYL  186
            A DPYV   GITED I  V+L+ + SAR++  LLG+IIE  GAGEGFGVA +D +E+WYL
Sbjct  121  AADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYL  180

Query  187  ETATGHHWMAQRLPKNHYFATGNQGRLQQYDPA-SADMMGSKNLIEFATEKGLYHPQKEG  245
            ET++GH+W+A RLP + YF ++NQGRL++YDP  +A+ M+S  L+ FA  +GLY+P + G
Sbjct  181  ETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPAR-G  239

Query  246  AFNFSKAYTRDDERDRTYNDPRVWTIQQMFNPSLKQAVDAGRQFPVTLSPEKKMTLEEVK  305
             F+F +AY++D+  D TYN PRVWT+Q+ FNP L   V +G  FPV L+P  K+++  VK
Sbjct  240  EFDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVK  299

Query  306  AVLRNHYDGTEHDPYSKGLNGQEPWRPVSVFRTYESHVMQVRPWMPREVGEVTYVGLGMA  365
              LRNHY+GT HDPY+ + N QEPWRP+SVFRT ESH++QVRP +P+ +G+V Y++ GM+
Sbjct  300  NALRNHYQGTSHDPYA-SHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMP  358

Query  366  DLTAFVPYYSGLEAYPAHYAMGSDKA  391
             L+ ++PYY G+     HY  G DK+
Sbjct  359  SLSVYLPYYQGMR----HYQPGDDKG  380

50) ETAC_07950 in NC_020796


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  320 bits (1199),  Expect = 1e-88, Method: Compositional matrix adjust.
 Identities = 184/355 (52%), Positives = 266/355 (75%), Gaps = 7/355 (1%)

Query  20   SCTTILIGAAATRDGSRIIARTEDHDPLLSKVLLKHPPKADQRGLFHANENAFSWPLPQT  79
            +CTT+++G  A+ DGS IIAR ED  +  +K  + HP   +Q+G + A+ N FSWPLP+T
Sbjct  19   ACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQQGEYKAHRNNFSWPLPET  78

Query  80   AQGYSAFANGKVGKTAAQMTWGAAGFNQRGVGMSATETIFASEQALLHDPYLSESGITED  139
            A  Y+A+ +      A     G AGFN  GVGMSATETI+ +  AL  DPY++ +GITED
Sbjct  79   AMRYTAIHDFDTNDNAM----GEAGFNSAGVGMSATETIYNGRAALAADPYVTKTGITED  134

Query  140  SIVDIVLPYIDSARDGVSRLGKMIEEQGAGEGFGVAFIDSDEIWYLETGSAHQWLAAKLP  199
            +I  ++LP  +SAR+G   LG +IE++GAGEGFGVAFIDS EIWYLETGS+HQWLA +LP
Sbjct  135  AIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYLETGSGHQWLAVRLP  194

Query  200  PHGYFVTGNQGRLRDYDPDDHDGYMASASLIDFALQHGLYDPQREGAFNFERAYTRHDDR  259
            +++YFV++NQGRLR+YDP+D+  YMAS++L+ FA ++GLYDP R G F+F++AY+ +D++
Sbjct  195  ADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPAR-GEFDFHQAYS-QDNK  252

Query  260  LDGYYNYPRVYALQQLYRPDPDRTLQQPQQFAVFEAPSAALDVESVKRGLRNTYDNLGRQ  319
             D  YNYPRV +LQ+ + P+ D  +   + F+VF +P + + V +VK +LRN Y+  +++
Sbjct  253  NDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKNALRNHYQGTSHD  312

Query  320  PYA-DTPDYTWRPISLFRTQQSHILQSRSGLPRALSDVIYLSYGMPSISLYIPFY  373
            PYA + P+  WRPIS+FRTQ+SHILQ R+ LP+A+++V Y++YGMPS+S+Y+P+Y
Sbjct  313  PYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSLSVYLPYY  367

51) ETAE_1728 in NC_013508


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  320 bits (1199),  Expect = 1e-88, Method: Compositional matrix adjust.
 Identities = 184/355 (52%), Positives = 266/355 (75%), Gaps = 7/355 (1%)

Query  20   SCTTILIGAAATRDGSRIIARTEDHDPLLSKVLLKHPPKADQRGLFHANENAFSWPLPQT  79
            +CTT+++G  A+ DGS IIAR ED  +  +K  + HP   +Q+G + A+ N FSWPLP+T
Sbjct  19   ACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQQGEYKAHRNNFSWPLPET  78

Query  80   AQGYSAFANGKVGKTAAQMTWGAAGFNQRGVGMSATETIFASEQALLHDPYLSESGITED  139
            A  Y+A+ +      A     G AGFN  GVGMSATETI+ +  AL  DPY++ +GITED
Sbjct  79   AMRYTAIHDFDTNDNAM----GEAGFNSAGVGMSATETIYNGRAALAADPYVTKTGITED  134

Query  140  SIVDIVLPYIDSARDGVSRLGKMIEEQGAGEGFGVAFIDSDEIWYLETGSAHQWLAAKLP  199
            +I  ++LP  +SAR+G   LG +IE++GAGEGFGVAFIDS EIWYLETGS+HQWLA +LP
Sbjct  135  AIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYLETGSGHQWLAVRLP  194

Query  200  PHGYFVTGNQGRLRDYDPDDHDGYMASASLIDFALQHGLYDPQREGAFNFERAYTRHDDR  259
            +++YFV++NQGRLR+YDP+D+  YMAS++L+ FA ++GLYDP R G F+F++AY+ +D++
Sbjct  195  ADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPAR-GEFDFHQAYS-QDNK  252

Query  260  LDGYYNYPRVYALQQLYRPDPDRTLQQPQQFAVFEAPSAALDVESVKRGLRNTYDNLGRQ  319
             D  YNYPRV +LQ+ + P+ D  +   + F+VF +P + + V +VK +LRN Y+  +++
Sbjct  253  NDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKNALRNHYQGTSHD  312

Query  320  PYA-DTPDYTWRPISLFRTQQSHILQSRSGLPRALSDVIYLSYGMPSISLYIPFY  373
            PYA + P+  WRPIS+FRTQ+SHILQ R+ LP+A+++V Y++YGMPS+S+Y+P+Y
Sbjct  313  PYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSLSVYLPYY  367

52) ETAF_1563 in NC_017309


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  320 bits (1199),  Expect = 1e-88, Method: Compositional matrix adjust.
 Identities = 184/355 (52%), Positives = 266/355 (75%), Gaps = 7/355 (1%)

Query  20   SCTTILIGAAATRDGSRIIARTEDHDPLLSKVLLKHPPKADQRGLFHANENAFSWPLPQT  79
            +CTT+++G  A+ DGS IIAR ED  +  +K  + HP   +Q+G + A+ N FSWPLP+T
Sbjct  19   ACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQQGEYKAHRNNFSWPLPET  78

Query  80   AQGYSAFANGKVGKTAAQMTWGAAGFNQRGVGMSATETIFASEQALLHDPYLSESGITED  139
            A  Y+A+ +      A     G AGFN  GVGMSATETI+ +  AL  DPY++ +GITED
Sbjct  79   AMRYTAIHDFDTNDNAM----GEAGFNSAGVGMSATETIYNGRAALAADPYVTKTGITED  134

Query  140  SIVDIVLPYIDSARDGVSRLGKMIEEQGAGEGFGVAFIDSDEIWYLETGSAHQWLAAKLP  199
            +I  ++LP  +SAR+G   LG +IE++GAGEGFGVAFIDS EIWYLETGS+HQWLA +LP
Sbjct  135  AIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYLETGSGHQWLAVRLP  194

Query  200  PHGYFVTGNQGRLRDYDPDDHDGYMASASLIDFALQHGLYDPQREGAFNFERAYTRHDDR  259
            +++YFV++NQGRLR+YDP+D+  YMAS++L+ FA ++GLYDP R G F+F++AY+ +D++
Sbjct  195  ADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPAR-GEFDFHQAYS-QDNK  252

Query  260  LDGYYNYPRVYALQQLYRPDPDRTLQQPQQFAVFEAPSAALDVESVKRGLRNTYDNLGRQ  319
             D  YNYPRV +LQ+ + P+ D  +   + F+VF +P + + V +VK +LRN Y+  +++
Sbjct  253  NDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKNALRNHYQGTSHD  312

Query  320  PYA-DTPDYTWRPISLFRTQQSHILQSRSGLPRALSDVIYLSYGMPSISLYIPFY  373
            PYA + P+  WRPIS+FRTQ+SHILQ R+ LP+A+++V Y++YGMPS+S+Y+P+Y
Sbjct  313  PYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSLSVYLPYY  367

53) BFO_1603 in NC_016610


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  316 bits (1185),  Expect = 2e-87, Method: Compositional matrix adjust.
 Identities = 179/363 (50%), Positives = 265/363 (74%), Gaps = 3/363 (0%)

Query  16   ECTTVIVGNKMTDDGSMIVARSEDWNTMFAKNLEIYEDTAEGPETFVARDSAFRCELPRE  75
             CTT++VGN+ + DGS I+AR+ED ++  AK+  I   + +    + A+ + F   LP  
Sbjct  19   ACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQQGEYKAHRNNFSWPLPET  78

Query  76   ALGYTALAPYHLPGH-WGSAGFNTAGVGMSATESIFSNEKALQADP-LVEDGVAENSVFN  133
            A+ YTA+  ++  ++  G AGFN+AGVGMSATE+I++   AL ADP +   G++E+++ +
Sbjct  79   AMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAALAADPYVTKTGITEDAIES  138

Query  134  IVLPYVRTAREGVRRLGELIERHGIAEGFGIGFVDDSEIWYLETACGHRWLACRMPEDKY  193
            ++LP  ++AR+G + LG++IE+ G +EGFG++F+D  EIWYLET+ GH+WLA R+P D Y
Sbjct  139  VILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYLETGSGHQWLAVRLPADSY  198

Query  194  FVTGNQSRFRKYDPNDTEHYMASADLIEFAREHGLYDPAKGEFDFHEAYARDIELDTTYN  253
            FV++NQ+R+R YDPND  +YMAS+ L+ FA+ +GLYDPA+GEFDFH+AY++D   DTTYN
Sbjct  199  FVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGEFDFHQAYSQDNKNDTTYN  258

Query  254  YPRVWGLQAMFSPQIKNDVAR-NTFPVFAEASKPLSLDDIRRAFRFHYQGTEHDPYLHRN  312
            YPRVW LQ  F+P++   V+  +TFPVF  +   +S+  ++ A+R HYQGT HDPY  +N
Sbjct  259  YPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKNALRNHYQGTSHDPYASHN  318

Query  313  PKEKYRPVSIFRTTQTHILHVRPELPQAIGRVDYMSMGMAVLGVFLPLYQGITSYPEAYT  372
            P+E  RP+S+FRT ++HIL+VRP LPQAIG V+Y++ GM+ L+V+LP YQG+  Y  +  
Sbjct  319  PQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSLSVYLPYYQGMRHYQPGDD  378

Query  373  KGT  375
            KG 
Sbjct  379  KGP  381

54) HMPREF0659_A6300 in NC_014370


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  313 bits (1174),  Expect = 1e-86, Method: Compositional matrix adjust.
 Identities = 180/362 (50%), Positives = 270/362 (75%), Gaps = 3/362 (0%)

Query  10   ECTTIIIGQEQTADGSMIVARSEDWDAMEAKNYEIFEDTDNGPREFVAKDSPFRCELPEK  69
             CTT+++G++ +ADGS I+AR+ED  A +AK+  I   + +   E+ A  + F   LPE 
Sbjct  19   ACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQQGEYKAHRNNFSWPLPET  78

Query  70   ALGYSALSPYNLHGH-WGSAGFNTAGVGMSATESIFSSDEVLKHDP-LVENGVAENSVFN  127
            A+ Y+A+  ++ +++  G AGFN+AGVGMSATE+I+++   L  DP +   G++E+++ +
Sbjct  79   AMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAALAADPYVTKTGITEDAIES  138

Query  128  ITLPYVHTAREGVERLGMLIEKYGIAEGFGIGFVDSKEIWYLETACGHRWLACRMPKDQY  187
            + LP  ++AR+G   LG +IE+ G +EGFG++F+DSKEIWYLET+ GH+WLA R+P D Y
Sbjct  139  VILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYLETGSGHQWLAVRLPADSY  198

Query  188  FVTGNQSRFRTYDPNDKENYLASADLIEFAEKHGLYNPAQGAFDFHEAYARDIKLDTTYN  247
            FV++NQ+R+R YDPND+ NY+AS+ L+ FA K+GLY+PA+G FDFH+AY++D K DTTYN
Sbjct  199  FVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGEFDFHQAYSQDNKNDTTYN  258

Query  248  YPRVWGLQQFFSPEIKNDVTK-NTFPVFAKAAHKVTLTELRTAFRFHYDNTEHDPYLNSN  306
            YPRVW LQ+ F+P++   V+  +TFPVF  +  K++++ ++ A+R HY+ T HDPY + N
Sbjct  259  YPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKNALRNHYQGTSHDPYASHN  318

Query  307  PKEPYRPVSIFRTTQTHLLQVRPELPQAIGCVNYVAMGMADLGVFLPLYQGITSYPEAYT  366
            P+EP RP+S+FRT ++H+LQVRP LPQAIG V+Y+A GM+ L+V+LP YQG+  Y  +  
Sbjct  319  PQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSLSVYLPYYQGMRHYQPGDD  378

Query  367  KG  368
            KG
Sbjct  379  KG  380

55) MU9_3194 in NC_020418


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  311 bits (1167),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 201/375 (54%), Positives = 274/375 (74%), Gaps = 6/375 (1%)

Query  6    LSLAVGAALVISDATACTTIFVGENASSDGAQYIARNEDMNPANPKVLQVNQEKVNKDTE  65
            L++AV + L ++   ACTT+FVG++AS+DG+  IARNED ++ N+K   ++    +++ E
Sbjct  5    LAFAV-TLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQQGE  63

Query  66   FKTNLNKFTYTLPEKAMRYTTIPEWNDKGQFRFSSNGFNDAGVGISATETIFANEASLKI  125
            +K++ N+F+  LPE AMRYT+I +  D  +   +  GFN AGVG+SATETI+   A+L  
Sbjct  64   YKAHRNNFSWPLPETAMRYTAIHD-FDTNDNAMGEAGFNSAGVGMSATETIYNGRAALAA  122

Query  126  DPYVEDTGIIEDAIPDVVLPYVSSAKEGVMRLgkiieekgagegfgVAFIDKDGIWYLET  185
            DPYV  TGI EDAI  V+LP   SA++G   LG IIE+KGAGEGFGVAFID   IWYLET
Sbjct  123  DPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYLET  182

Query  186  GSGHQWMAAKIPANTYYVTANQGRLEKFDMNDKENYLSSPTLISFAEKNGLYDPKKDGEF  245
            GSGHQW+A ++PA++Y+V+ANQGRL  +D ND+ NY++SPTL+SFA K+GLYDP + GEF
Sbjct  183  GSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPAR-GEF  241

Query  246  NFKKAYTKDDAKSDGYYNYPRVLVLQKMYNPEIKTDFKDVKSNDFPVFLKPAKKLGLEDI  305
            +F +AY++D+ K+D  YNYPRV  LQ  +NP++ T      ++ FPVFL P  K+++  +
Sbjct  242  DFHQAYSQDN-KNDTTYNYPRVWTLQHQFNPHLDTVVSP--GETFPVFLTPITKISVAAV  298

Query  306  KAGLRNHYENVGTSPYATTYPDTTKRPISVFRTQHSHILQVRKDLPKEIGNVRYIAFGMP  365
            K +LRNHY+  +  PYA+  P+   RPISVFRTQ+SHILQVR  LP+ IGNV YIA+GMP
Sbjct  299  KNALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMP  358

Query  366  TLSVYVPVYYGPDSY  380
            +LSVY+P Y G   Y
Sbjct  359  SLSVYLPYYQGMRHY  373

56) CCC13826_1838 in NC_009802


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  311 bits (1166),  Expect = 5e-86, Method: Compositional matrix adjust.
 Identities = 189/375 (51%), Positives = 269/375 (72%), Gaps = 13/375 (3%)

Query  14   AILGTSS-LACTTILVGDKASNDGSMLVARSADSKAIKAQVFLIHPATKNQTGMHSSKAH  72
            ++LG +  +ACTT++VG++AS DGS ++AR+ D+ A +A+  +IHP + +Q G    KAH
Sbjct  10   TLLGMGKVIACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQQGEY--KAH  67

Query  73   DGANDFTYPLPKDGMRYTTIAN--SHTKLHGAVGYNEAGVGLSGTETIYAKDELLKIDPY  130
               N+F+ PLP  +MRYT+I +  ++ +  G  G+N AGVG+S+TETIY     L  DPY
Sbjct  68   R--NNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAALAADPY  125

Query  131  NEETGITEDDIPDVLLPRIKSAKEGVKLLGEIVETKGAGEGFGVVFVDANELWYFETGTG  190
               TGITED I  V+LP  +SA++G KLLG+I+E KGAGEGFGV F+D++E+WY+ETG+G
Sbjct  126  VTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYLETGSG  185

Query  191  HKWIASKIPQDEYFVTANQGRLHAYKEND-PNFMGAKDVIKFAIDNKTYDPAKDGEFNFT  249
            H+W+A ++P D YFV+ANQGRL+ Y  ND +N+M++  ++ FA  +  YDPA+ GEF+F 
Sbjct  186  HQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPAR-GEFDFH  244

Query  250  KAYTRDDERDVTYNYPRVCW-VQSMFNPSLKQDFADGQKFPVFLKPEKKLSIEDLKAAMR  308
            +AY++D+  D TYNYPRV W +Q  FNP L    + G+ FPVFL P  K+S+  +K A+R
Sbjct  245  QAYSQDNKNDTTYNYPRV-WTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKNALR  303

Query  309  AHYDGTAFDNYASKDEDKKNIYRAISVFRTYESHVMQVRPWLPKEIGRVTYVALGMADLS  368
             HY+GT+ D YAS + +  +  R+ISVFRT ESH++QVRP LP+ IG V Y+A GM+ LS
Sbjct  304  NHYQGTSHDPYASHNPQ--EPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSLS  361

Query  369  VYLPYYEGLDGFIKG  383
            VYLPYY+G+  +  G
Sbjct  362  VYLPYYQGMRHYQPG  376

57) PIN17_A0686 in NC_017861


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  311 bits (1166),  Expect = 5e-86, Method: Compositional matrix adjust.
 Identities = 183/363 (51%), Positives = 263/363 (73%), Gaps = 3/363 (0%)

Query  14   ECTTMIVGQEMTSDGSMMVARSEDWDAMEAKNYEIYEDTTEGATEYVAKDSPFRCELPKE  73
             CTT++VG++ ++DGS ++AR+ED  A +AK+  I   + +   EY A  + F   LP  
Sbjct  19   ACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQQGEYKAHRNNFSWPLPET  78

Query  74   ALGYSALAPYCLPNH-WGSAGFNTAGVGMSATESIFSSDEALKYDP-LVENGIAENAVFN  131
            A+ Y+A+  +   ++  G AGFN+AGVGMSATE+I+++  AL  DP +   GI+E+A+ +
Sbjct  79   AMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAALAADPYVTKTGITEDAIES  138

Query  132  VVLPYIRTAREGVERLGMLIEKHGIAEGFGIGFVDNKEIWYLETACGHRWLACRMPKDQY  191
            V+LP  ++AR+G   LG +IE+ G +EGFG++F+D+KEIWYLET+ GH+WLA R+P D Y
Sbjct  139  VILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYLETGSGHQWLAVRLPADSY  198

Query  192  FVTGNQSRFRLYDPLDTENYMASNDLLEFAEKHGLYDPKKGDFDFHEAYARDIKLDTTYN  251
            FV++NQ+R+R YDP D  NYMAS  L+ FA K+GLYDP +G+FDFH+AY++D K DTTYN
Sbjct  199  FVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGEFDFHQAYSQDNKNDTTYN  258

Query  252  YPRVWGLQKMFSPSIKNDVTK-NTFPVYAKAEKPISIADMRHAFRFHYDNTEHDPYLHSN  310
            YPRVW LQ  F+P +   V+  +TFPV+  +   IS+A +++A+R HY+ T HDPY   N
Sbjct  259  YPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKNALRNHYQGTSHDPYASHN  318

Query  311  PKEPYRPVSIFRTTQTHILQVRPELPQAIGCVNYVAMGMADLGLFLPLYQGITSYPEAYT  370
            P+EP RP+S+FRT ++HILQVRP LPQAIG V+Y+A GM+ L+++LP YQG+  Y  +  
Sbjct  319  PQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSLSVYLPYYQGMRHYQPGDD  378

Query  371  KGT  373
            KG 
Sbjct  379  KGP  381

58) HMPREF9137_0311 in NC_015311


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  309 bits (1160),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 177/363 (49%), Positives = 266/363 (74%), Gaps = 3/363 (0%)

Query  15   ECTTIIIGQEQTADGSMIVSRSEDWDAMEAKNYEIFEDTENGLCEFVARDSPFRCELPGK  74
             CTT+++G++ +ADGS I++R+ED  A +AK+  I   + +   E+ A+ + F   LP  
Sbjct  19   ACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQQGEYKAHRNNFSWPLPET  78

Query  75   ALGYTALSPYSLHRH-WGSAGFNSAGVGMSATESIFSSDEVLKYDP-LVENGVAENSVFN  132
            A+ YTA+  +  + +  G AGFNSAGVGMSATE+I+++   L  DP +   G++E+++ +
Sbjct  79   AMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAALAADPYVTKTGITEDAIES  138

Query  133  ITLPYVRTAREGVERLGMLIEEHGIAEGFGIGFVDNKEIWYLETACGHRWLACRMPKDQY  192
            + LP  ++AR+G   LG +IE+ G +EGFG++F+D+KEIWYLET+ GH+WLA R+P D Y
Sbjct  139  VILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYLETGSGHQWLAVRLPADSY  198

Query  193  FVTGNQSRFRTYDPDDKDNYLASADLIEFAEKHGLYDPSQGAFDFHKAYARDVELDTTYN  252
            FV++NQ+R+R YDP+D+ NY+AS+ L+ FA K+GLYDP++G FDFH+AY++D   DTTYN
Sbjct  199  FVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGEFDFHQAYSQDNKNDTTYN  258

Query  253  YPRVWGLQRLFSPDIKNDVTK-NTFPVFARAAHKITLTELRTAFRFHYDNTEHDPYLHSN  311
            YPRVW LQ+ F+P++   V+  +TFPVF  +  KI+++ ++ A+R HY+ T HDPY   N
Sbjct  259  YPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKNALRNHYQGTSHDPYASHN  318

Query  312  PKEPYRPVSIFRTTQTHLLQVRPELPQAIGCINYVAMGMADLGVFLPLYQGITSYPEAYT  371
            P+EP RP+S+FRT ++H+LQVRP LPQAIG ++Y+A GM+ L+V+LP YQG+  Y  +  
Sbjct  319  PQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSLSVYLPYYQGMRHYQPGDD  378

Query  372  KGT  374
            KG 
Sbjct  379  KGP  381

59) SARI_00887 in NC_010067


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  307 bits (1150),  Expect = 8e-85, Method: Compositional matrix adjust.
 Identities = 182/347 (53%), Positives = 262/347 (76%), Gaps = 9/347 (2%)

Query  2    IVARSADSDAMKAQHFVIHPAMHNQTGMYSTKAHNGANDFTWPLPKESLRYTTVPNWKTQ  61
            I+AR+ D+ A +A+H VIHP   +Q G Y  KAH   N+F+WPLP  ++RYT++ +  T+
Sbjct  36   IIARNEDGSANNAKHKVIHPVAFHQQGEY--KAHR--NNFSWPLPETAMRYTAIHDFDTN  91

Query  62   LH--GATGFNEAGVGVSGTESIFASPKALAFDPYVEDKGITEDDIPDILLSQTKTAREAI  119
             +  G +GFN AGVG+S+TE+I+ +  ALA DPYV   GITED I  ++L+ +++AR++ 
Sbjct  92   DNAMGEAGFNSAGVGMSATETIYNGRAALAADPYVTKTGITEDAIESVILPVAQSARQGA  151

Query  120  ALLGHIIETvgagegfgvavvDDNEIWYLETATGHQWMAQRLPADQYFATGNQGRLQNYD  179
             LLG+IIE  GAGEGFGVA +D +EIWYLET++GHQW+A RLPAD YF ++NQGRL++YD
Sbjct  152  KLLGDIIEQKGAGEGFGVAFIDSKEIWYLETGSGHQWLAVRLPADSYFVSANQGRLRHYD  211

Query  180  PND-ANMMGSKSLVTFATEKGLYNPQKDGKFNFSKAYTRDDERDRTYNDPRVWTIQQKFN  238
            PND AN M+S +LV+FA  +GLY+P + G F+F +AY++D+  D TYN PRVWT+Q++FN
Sbjct  212  PNDNANYMASPTLVSFAKKQGLYDPAR-GEFDFHQAYSQDNKNDTTYNYPRVWTLQHQFN  270

Query  239  PSVKQDMTAGRLFPVFMMPEKKMTLDDVKAVLRSHYEGTKHDPYSNGLNGKEPWRPVSVF  298
            P +   +++G  FPVF+ P  K+++  VK  LR+HY+GT HDPY+ + N +EPWRP+SVF
Sbjct  271  PHLDTVVSPGETFPVFLTPITKISVAAVKNALRNHYQGTSHDPYA-SHNPQEPWRPISVF  329

Query  299  RTYEAHVMQVRPWLPKEIGEVSYIGLGMADLTAFVPYYSGLKAYPAN  345
            RT E+H++QVRP LP+ IG+V YI+ GM+ L+ ++PYY G++ Y + 
Sbjct  330  RTQESHILQVRPKLPQAIGNVEYIAYGMPSLSVYLPYYQGMRHYQPG  376

60) ETAC_10745 in NC_020796


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  292 bits (1094),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 189/382 (50%), Positives = 272/382 (72%), Gaps = 14/382 (3%)

Query  16   ACTTILVGAGATSDGSRIIARTEDHDPTLSKVMLKHQAKENSSDTFHANENKFTYSVPKK  75
            ACTT++VG  A++DGS IIAR ED  +  +K  + H    +  + + A+ N+F+ ++P  
Sbjct  19   ACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQQGEYKAHRNNFSWPLPET  78

Query  76   AFSYTS---FSNGKEGKQPDQMTWGAAGFNQKGVGMTATETIFASAEALKHDPYLPETGI  132
            A  YT+   F    ++        G AGFN  GVGM+ATETI+ +  AL  DPY+  TGI
Sbjct  79   AMRYTAIHDFDTNDNAM-------GEAGFNSAGVGMSATETIYNGRAALAADPYVTKTGI  131

Query  133  TEDSITDVILPYVSSAREGAARLgkiieekgagegfgVAFVDQHDIWYLETGSGHQWLAT  192
            TED+I  VILP   SAR+GA  LG IIE+KGAGEGFGVAF+D  +IWYLETGSGHQWLA 
Sbjct  132  TEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYLETGSGHQWLAV  191

Query  193  RLPKDDYYVTGNQGRLQTYKPDDSANYMASPTLISAAEKYGLYDPKRDGDFNFEKAYTLH  252
            RLP D Y+V++NQGRL+ Y P+D+ANYMASPTL+S A K GLYDP R G+F+F++AY+ +
Sbjct  192  RLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPAR-GEFDFHQAYS-Q  249

Query  253  NEKNDPYYNYPRVYALQHLYTPDIKTSLAEPQHFPVFAKPEAKLDIDAVKQGLRNTYENI  312
            ++KND  YNYPRV +LQH + P++ T ++  + FPVF  P +K+ + AVK++LRN Y+  
Sbjct  250  DNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKNALRNHYQGT  309

Query  313  ERKPY-TQTPDYRLRPVSLFRTQQAHILQARDGLPQGIADVEYLAYGMPSISIFIPVYAN  371
             + PY ++ P+   RP+S+FRTQ++HILQ R  LPQ+I++VEY+AYGMPS+S+++P Y +
Sbjct  310  SHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSLSVYLPYY-Q  368

Query  372  SIHQFPQAYRTVTSGKADSVSA  393
            +++++  +      G+A ++++
Sbjct  369  GMRHYQPGDDKGPIGRATTLPT  390

61) ETAE_2273 in NC_013508


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  292 bits (1093),  Expect = 3e-80, Method: Compositional matrix adjust.
 Identities = 189/382 (50%), Positives = 272/382 (72%), Gaps = 14/382 (3%)

Query  24   ACTTILVGAGATSDGSRIIARTEDHDPTLSKVMLKHQAKENSSDTFHANENKFTYSVPKK  83
            ACTT++VG  A++DGS IIAR ED  +  +K  + H    +  + + A+ N+F+ ++P  
Sbjct  19   ACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQQGEYKAHRNNFSWPLPET  78

Query  84   AFSYTS---FSNGKEGKQPDQMTWGAAGFNQKGVGMTATETIFASAEALKHDPYLPETGI  140
            A  YT+   F    ++        G AGFN  GVGM+ATETI+ +  AL  DPY+  TGI
Sbjct  79   AMRYTAIHDFDTNDNAM-------GEAGFNSAGVGMSATETIYNGRAALAADPYVTKTGI  131

Query  141  TEDSITDVILPYVSSAREGAARLgkiieekgagegfgVAFVDQHDIWYLETGSGHQWLAT  200
            TED+I  VILP   SAR+GA  LG IIE+KGAGEGFGVAF+D  +IWYLETGSGHQWLA 
Sbjct  132  TEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYLETGSGHQWLAV  191

Query  201  RLPKDDYYVTGNQGRLQTYKPDDSANYMASPTLISAAEKYGLYDPKRDGDFNFEKAYTLH  260
            RLP D Y+V++NQGRL+ Y P+D+ANYMASPTL+S A K GLYDP R G+F+F++AY+ +
Sbjct  192  RLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPAR-GEFDFHQAYS-Q  249

Query  261  NEKNDPYYNYPRVYALQHLYTPDIKTSLAEPQHFPVFAKPEAKLDIDAVKQGLRNTYENI  320
            ++KND  YNYPRV +LQH + P++ T ++  + FPVF  P +K+ + AVK++LRN Y+  
Sbjct  250  DNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKNALRNHYQGT  309

Query  321  ERKPY-TQTPDYRLRPVSLFRTQQAHILQARDGLPQGIADVEYLAYGMPSISIFIPVYAN  379
             + PY ++ P+   RP+S+FRTQ++HILQ R  LPQ+I++VEY+AYGMPS+S+++P Y +
Sbjct  310  SHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSLSVYLPYY-Q  368

Query  380  SIHQFPQAYRTVTSGKADSVSA  401
            +++++  +      G+A ++++
Sbjct  369  GMRHYQPGDDKGPIGRATTLPT  390

62) Bphyt_0754 in NC_010681


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  288 bits (1077),  Expect = 6e-79, Method: Compositional matrix adjust.
 Identities = 173/374 (47%), Positives = 270/374 (73%), Gaps = 11/374 (2%)

Query  1    MKRIFATIFAFVASAQLSLACTTIIVGKKATVDGSILVARNDDGPGITAVNFLYHP---P  57
            MK+ +A   ++++ +++ +ACTT++VG++A+ DGS+++ARN+DG++  A + + HP    
Sbjct  1    MKKYLAFAVTLLGMGKV-IACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFH  59

Query  58   RRDGYTLRSVMKNKFSYEMPSHLMGYTGSPR--GSGSAYDESGFNDAGVGVSATETIVSN  115
            +++ Y  +   +N+FS  +P   M YT+      +++A +E+GFN AGVG+SATETI + 
Sbjct  60   QQGEYKAH---RNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNG  116

Query  116  ARTLSVDPYVKETGIVEEVIPTIILSQAKSAREGVELLGALVESHGSAEGFGVAFVDSNE  175
              +L+ DPYV  TGI E+ I ++IL+ A+SAR+G  LLG ++E  G++EGFGVAF+DS+E
Sbjct  117  RAALAADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKE  176

Query  176  AWYLENAGGHQWLAMRIPDDSYFVSANQSRLGEFDPDDH-NFLSSPNLVGFAQTHGLYDR  234
             WYLE ++GHQWLA+R+P DSYFVSANQ+RL ++DP+D+ N+++SP LV+FA+ +GLYD 
Sbjct  177  IWYLETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDP  236

Query  235  ETEGPFSFRRAFGRDNEIDVRYNYPRVAQLQKWFTANAADQSVTANGFPTFRRPDHPVAV  294
             + G F F++A+++DN  D  YNYPRV  LQ  F ++       ++ FP F  P   ++V
Sbjct  237  -ARGEFDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISV  295

Query  295  TDVQRALQDYFAGTPSDPYTSANPAATARPISVYRTYQSHVLQTRKGLPEGIANVEYLDL  354
            + V+ AL++ + GT+ DPY+S NP    RPISV+RT +SH+LQ R  LP++I+NVEY+  
Sbjct  296  AAVKNALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAY  355

Query  355  GMTALGIYLPFYQG  368
            GM +L++YLP+YQG
Sbjct  356  GMPSLSVYLPYYQG  369

63) NT01EI_1980 in NC_012779


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  287 bits (1076),  Expect = 5e-79, Method: Compositional matrix adjust.
 Identities = 170/334 (51%), Positives = 245/334 (74%), Gaps = 7/334 (2%)

Query  20   SCTTILIGAAATRDGSRIIARTEDHDPLLSKVLLKHPPQADQRGRFHANENAFSWPLPAT  79
            +CTT+++G  A+ DGS IIAR ED  +  +K  + HP   +Q+G + A+ N FSWPLP T
Sbjct  19   ACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQQGEYKAHRNNFSWPLPET  78

Query  80   AQGYSAFANGKSGKTAAQMTWGAAGFNQRGVGMSATETIFASEQALLHDPYLSESGITED  139
            A  Y+A+ +  +   A     G AGFN  GVGMSATETI+ +  AL  DPY++ +GITED
Sbjct  79   AMRYTAIHDFDTNDNAM----GEAGFNSAGVGMSATETIYNGRAALAADPYVTKTGITED  134

Query  140  SIVDIVLPYIDSAREGVSRLGKMIEEQGAGEGFGVAFIDPDEIWYLETGSAHQWLAAKLA  199
            +I  ++LP  +SAR+G   LG +IE++GAGEGFGVAFID+ EIWYLETGS+HQWLA +L+
Sbjct  135  AIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYLETGSGHQWLAVRLP  194

Query  200  PHCYFVTGNQGRLRDYNPDDRDDYMASASLIDFALQHGLYDPQRDGQFNFERAYTRHDDR  259
            ++ YFV++NQGRLR+Y+P+D  +YMAS++L+ FA ++GLYDP R G+F+F++AY+ +D++
Sbjct  195  ADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPAR-GEFDFHQAYS-QDNK  252

Query  260  LDGYYNYPRVYALQQLYRPDPDRTLQQPQRFAVFEAPSDALDVESVKRGLRNTYDNLGRQ  319
             D  YNYPRV +LQ+ + P+ D  +   + F+VF +P   + V +VK +LRN Y+  +++
Sbjct  253  NDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKNALRNHYQGTSHD  312

Query  320  PYA-DTPDYTWRPISLFRTQQSHILQSRSGLPRA  352
            PYA + P+  WRPIS+FRTQ+SHILQ R+ LP+A
Sbjct  313  PYASHNPQEPWRPISVFRTQESHILQVRPKLPQA  346

64) Poras_1283 in NC_015501


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  287 bits (1075),  Expect = 8e-79, Method: Compositional matrix adjust.
 Identities = 169/365 (47%), Positives = 260/365 (72%), Gaps = 6/365 (1%)

Query  11   ECTTIIVGSRMSADGSRIVARSEDWDAMFAKNLTIYRPGEPGSVDPMRFDAFDSPFACDL  70
             CTT++VG++ SADGS I+AR+ED  A  AK+  I   +     +   + A  + F+  L
Sbjct  19   ACTTLFVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQQGE---YKAHRNNFSWPL  75

Query  71   PGEAQSYSALPPYHLKGH-WGSAGFNESGVGMSATESIFSSDAALAVDP-LVEDGVAENS  128
            P  A  Y+A+  ++ +++  G AGFN +GVGMSATE+I+++ AALA DP +   G++E++
Sbjct  76   PETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAALAADPYVTKTGITEDA  135

Query  129  VFNIVLPYIHTAREGVERLGKLIEEYGVSEGFGIGFVDSDEIWYLETASGHRWLACRIPE  188
            + +++LP  ++AR+G   LG +IE+ G +EGFG++F+DS EIWYLET+SGH+WLA R+P 
Sbjct  136  IESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYLETGSGHQWLAVRLPA  195

Query  189  EQYFVTGNQSRFRQYDPKDKEHFMASSDLIDFAQEHGLYDPKEGAFDFHKAYIRDVELDT  248
            + YFV++NQ+R+R+YDP+D+ ++MAS+ L+ FA+ +GLYDP  G FDFH+AY +D   DT
Sbjct  196  DSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGEFDFHQAYSQDNKNDT  255

Query  249  TYNYPRVWGLQQMFTPAMKQDVSVND-FPVYAKAEKPITMEAMRHAFRFHYDDTEHDPYL  307
            TYNYPRVW LQ+ F P +   VS  + FPV+  +   I++ A+++A+R HY++T HDPY 
Sbjct  256  TYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKISVAAVKNALRNHYQGTSHDPYA  315

Query  308  HSNPHEVYRPVSIFRTTQTHILQVQPKLPVAVGRINHVCLGMADLGLFVPLFQGVTSYPE  367
              NP+E  RP+S+FRT ++HILQV+PKLP A+G ++ +  GM+ L++++P +QG+  Y  
Sbjct  316  SHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSLSVYLPYYQGMRHYQP  375

Query  368  PYTKG  372
               KG
Sbjct  376  GDDKG  380

65) ETAF_2051 in NC_017309


> AF060858|4|G4|3511131|AAC33721.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_2229|+|2865..4166|pipD|-|dipeptidase 
homolog
Length=433

 Score =  270 bits (1009),  Expect = 1e-73, Method: Compositional matrix adjust.
 Identities = 171/337 (51%), Positives = 245/337 (73%), Gaps = 14/337 (4%)

Query  14   FHANENKFTYSVPKKAFSYTS---FSNGKEGKQPDQMTWGAAGFNQKGVGMTATETIFAS  70
            + A+ N+F+ ++P  A  YT+   F    ++        G AGFN  GVGM+ATETI+ +
Sbjct  64   YKAHRNNFSWPLPETAMRYTAIHDFDTNDNAM-------GEAGFNSAGVGMSATETIYNG  116

Query  71   AEALKHDPYLPETGITEDSITDVILPYVSSAREGAARLgkiieekgagegfgVAFVDQHD  130
              AL  DPY+  TGITED+I  VILP   SAR+GA  LG IIE+KGAGEGFGVAF+D  +
Sbjct  117  RAALAADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKE  176

Query  131  IWYLETGSGHQWLATRLPKDDYYVTGNQGRLQTYKPDDSANYMASPTLISAAEKYGLYDP  190
            IWYLETGSGHQWLA RLP D Y+V++NQGRL+ Y P+D+ANYMASPTL+S A K GLYDP
Sbjct  177  IWYLETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDP  236

Query  191  KRDGDFNFEKAYTLHNEKNDPYYNYPRVYALQHLYTPDIKTSLAEPQHFPVFAKPEAKLD  250
             R G+F+F++AY+ +++KND  YNYPRV +LQH + P++ T ++  + FPVF  P +K+ 
Sbjct  237  AR-GEFDFHQAYS-QDNKNDTTYNYPRVWTLQHQFNPHLDTVVSPGETFPVFLTPITKIS  294

Query  251  IDAVKQGLRNTYENIERKPY-TQTPDYRLRPVSLFRTQQAHILQARDGLPQGIADVEYLA  309
            + AVK++LRN Y+   + PY ++ P+   RP+S+FRTQ++HILQ R  LPQ+I++VEY+A
Sbjct  295  VAAVKNALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIA  354

Query  310  YGMPSISIFIPVYANSIHQFPQAYRTVTSGKADSVSA  346
            YGMPS+S+++P Y ++++++  +      G+A ++++
Sbjct  355  YGMPSLSVYLPYY-QGMRHYQPGDDKGPIGRATTLPT  390