Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
putative transposase subunit |
NC_017640 (Escherichia coli UMNK88) |
4e-74 |
94 |
|
transposase IS3/IS911, orf B |
NC_012214 (Erwinia pyrifoliae Ep1/96) |
2e-66 |
83 |
|
putative IS tranposase |
NC_017631 (Escherichia coli ABU 83972) |
3e-63 |
83 |
|
transposase insF |
NC_004431 (Escherichia coli CFT073) |
1e-62 |
83 |
|
IS3 ORF2 |
NC_007385 (Shigella sonnei Ss046) |
2e-46 |
88 |
|
hypothetical protein |
NC_022221 (Salmonella enterica CDC1983-67) |
2e-45 |
79 |
|
hypothetical protein |
NC_016831 (Salmonella enterica RKS5078) |
2e-45 |
79 |
|
Integrase catalytic region |
NC_022268 (Serratia sp. ATCC 39006) |
4e-41 |
70 |
|
IS3 orfB |
NC_004741 (Shigella flexneri 2457T) |
6e-41 |
75 |
|
IS3 ORF2 |
NC_008258 (Shigella flexneri 8401) |
6e-41 |
75 |
|
IS3 orfB |
NC_009434 (Pseudomonas stutzeri A1501) |
3e-40 |
62 |
|
IS3 ORF2 |
NC_008789 (Halorhodospira halophila SL1) |
4e-38 |
58 |
|
IS3 ORF2 |
NC_008789 (Halorhodospira halophila SL1) |
1e-37 |
57 |
|
hypothetical protein |
NC_022221 (Salmonella enterica CDC1983-67) |
4e-36 |
80 |
|
transposase |
NC_011205 (Salmonella enterica CT_02021853) |
4e-36 |
80 |
|
hypothetical protein |
NC_016831 (Salmonella enterica RKS5078) |
4e-36 |
80 |
|
transposase |
NC_021984 (Salmonella enterica S06004) |
4e-31 |
74 |
|
putative transposase |
NC_015974 (Sphingobium sp. SYK-6) |
1e-30 |
41 |
|
transposase |
NC_009328 (Geobacillus thermodenitrificans NG80-2) |
1e-29 |
41 |
|
IS3-family transposase |
NC_020911 (Octadecabacter antarcticus 307) |
4e-28 |
41 |
|
transposase |
NC_018866 (Dehalobacter sp. DCA) |
1e-26 |
43 |
|
transposase |
NC_006834 (Xanthomonas oryzae KACC10331) |
1e-25 |
43 |
|
transposase |
NC_007705 (Xanthomonas oryzae MAFF 311018) |
1e-25 |
43 |
|
integrase catalytic subunit |
NC_015656 (Frankia sp. 4085684) |
2e-25 |
41 |
|
transposase |
NC_005241 (Ralstonia eutropha H16) |
2e-25 |
41 |
|
transposase |
NC_015727 (Cupriavidus necator N-1) |
4e-24 |
41 |
|
transposase InsF for insertion sequence IS3 |
NC_015727 (Cupriavidus necator N-1) |
6e-24 |
41 |
|
integrase |
NC_019393 (Alteromonas macleodii AltDE1) |
4e-23 |
41 |
|
transposase |
NC_011758 (Methylobacterium chloromethanicum CM4) |
4e-21 |
41 |
|
hypothetical protein |
NC_017167 (Alicyclobacillus acidocaldarius Tc-4-1) |
2e-20 |
41 |
|
IS5 family transposase orfB |
NC_020126 (Myxococcus stipitatus DSM 14675) |
2e-18 |
45 |
|
hypothetical protein |
NC_021807 (Streptococcus pyogenes HSC5) |
3e-16 |
41 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='AF041809' AND ph.id_pai_orf='4' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc