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Homologs of tra5_2 gene of AF041809

DNA-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) ECO26_0404
( - )

NC_013361
(Escherichia coli 11368)

e-266

99.8

2) ECO26_2884
( - )

NC_013361
(Escherichia coli 11368)

e-266

99.8

3) ECO26_3725
( - )

NC_013361
(Escherichia coli 11368)

e-266

99.8

4) ECO103_1074
( - )

NC_013353
(Escherichia coli 12009)

e-249

100

5) E2348_P1_rr__09
( - )

NC_011603
(Escherichia coli E2348/69)

7e-97

89.9

6) E2348_P1_028
( - )

NC_011603
(Escherichia coli E2348/69)

7e-97

89.9

• Sequence Alignments

1) ECO26_0404 in NC_013361


>AF041809|4|G4|3015630|AAC28569.1|Escherichia_coli_172|+|1840..2373|tra5_2|-|transposase 
          Length = 534

 Score = 914 bits (2358), Expect = e-266
 Identities = 464/465 (100%)
 Strand = Plus / Plus

Query: 1   atgaagtatgtctttattgaaaaacatcaggctgagttcagcatcaaagcaatgtgccgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgaagtatgtctttattgaaaaacatcaggctgagttcagcatcaaagcaatgtgccgc 60

Query: 61  gtgctccgggtggcccgcagcggctggtatacgtggtgtcagcggcggacaaggataagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gtgctccgggtggcccgcagcggctggtatacgtggtgtcagcggcggacaaggataagc 120

Query: 121 acgcgtcagcagttccgccaacactgcgacagcgttgtcctcgcggcttttacccggtca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acgcgtcagcagttccgccaacactgcgacagcgttgtcctcgcggcttttacccggtca 180

Query: 181 aaacagcgttacggtgccccacgcctgacggatgaactgcgtgctcagggttaccccttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaacagcgttacggtgccccacgcctgacggatgaactgcgtgctcagggttaccccttt 240

Query: 241 aacgtaaaaaccgtggcggcaagcctgcgccgtcagggactgagggcaaaggcctcccgg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aacgtaaaaaccgtggcggcaagcctgcgccgtcagggactgagggcaaaggcctcccgg 300

Query: 301 aagttcagcccggtcagctaccgcgcacacggcctgcctgtgtcagaaaatctgttggag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagttcagcccggtcagctaccgcgcacacggcctgcctgtgtcagaaaatctgttggag 360

Query: 361 caggatttttacgccagtggcccgaaccagaagtgggcaggagacatcacgtacttacgt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caggatttttacgccagtggcccgaaccagaagtgggcaggagacatcacgtacttacgt 420

Query: 421 acagatgaaggctggctgtatctggcagtggtcattgacctgtag 465
           ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 421 acagatgaaggctggctgtatctggcagtggtcattgacctgtgg 465

2) ECO26_2884 in NC_013361


>AF041809|4|G4|3015630|AAC28569.1|Escherichia_coli_172|+|1840..2373|tra5_2|-|transposase 
          Length = 534

 Score = 914 bits (2358), Expect = e-266
 Identities = 464/465 (100%)
 Strand = Plus / Plus

Query: 1   atgaagtatgtctttattgaaaaacatcaggctgagttcagcatcaaagcaatgtgccgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgaagtatgtctttattgaaaaacatcaggctgagttcagcatcaaagcaatgtgccgc 60

Query: 61  gtgctccgggtggcccgcagcggctggtatacgtggtgtcagcggcggacaaggataagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gtgctccgggtggcccgcagcggctggtatacgtggtgtcagcggcggacaaggataagc 120

Query: 121 acgcgtcagcagttccgccaacactgcgacagcgttgtcctcgcggcttttacccggtca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acgcgtcagcagttccgccaacactgcgacagcgttgtcctcgcggcttttacccggtca 180

Query: 181 aaacagcgttacggtgccccacgcctgacggatgaactgcgtgctcagggttaccccttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaacagcgttacggtgccccacgcctgacggatgaactgcgtgctcagggttaccccttt 240

Query: 241 aacgtaaaaaccgtggcggcaagcctgcgccgtcagggactgagggcaaaggcctcccgg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aacgtaaaaaccgtggcggcaagcctgcgccgtcagggactgagggcaaaggcctcccgg 300

Query: 301 aagttcagcccggtcagctaccgcgcacacggcctgcctgtgtcagaaaatctgttggag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagttcagcccggtcagctaccgcgcacacggcctgcctgtgtcagaaaatctgttggag 360

Query: 361 caggatttttacgccagtggcccgaaccagaagtgggcaggagacatcacgtacttacgt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caggatttttacgccagtggcccgaaccagaagtgggcaggagacatcacgtacttacgt 420

Query: 421 acagatgaaggctggctgtatctggcagtggtcattgacctgtag 465
           ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 421 acagatgaaggctggctgtatctggcagtggtcattgacctgtgg 465

3) ECO26_3725 in NC_013361


>AF041809|4|G4|3015630|AAC28569.1|Escherichia_coli_172|+|1840..2373|tra5_2|-|transposase 
          Length = 534

 Score = 914 bits (2358), Expect = e-266
 Identities = 464/465 (100%)
 Strand = Plus / Plus

Query: 1   atgaagtatgtctttattgaaaaacatcaggctgagttcagcatcaaagcaatgtgccgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgaagtatgtctttattgaaaaacatcaggctgagttcagcatcaaagcaatgtgccgc 60

Query: 61  gtgctccgggtggcccgcagcggctggtatacgtggtgtcagcggcggacaaggataagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gtgctccgggtggcccgcagcggctggtatacgtggtgtcagcggcggacaaggataagc 120

Query: 121 acgcgtcagcagttccgccaacactgcgacagcgttgtcctcgcggcttttacccggtca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acgcgtcagcagttccgccaacactgcgacagcgttgtcctcgcggcttttacccggtca 180

Query: 181 aaacagcgttacggtgccccacgcctgacggatgaactgcgtgctcagggttaccccttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaacagcgttacggtgccccacgcctgacggatgaactgcgtgctcagggttaccccttt 240

Query: 241 aacgtaaaaaccgtggcggcaagcctgcgccgtcagggactgagggcaaaggcctcccgg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aacgtaaaaaccgtggcggcaagcctgcgccgtcagggactgagggcaaaggcctcccgg 300

Query: 301 aagttcagcccggtcagctaccgcgcacacggcctgcctgtgtcagaaaatctgttggag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagttcagcccggtcagctaccgcgcacacggcctgcctgtgtcagaaaatctgttggag 360

Query: 361 caggatttttacgccagtggcccgaaccagaagtgggcaggagacatcacgtacttacgt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caggatttttacgccagtggcccgaaccagaagtgggcaggagacatcacgtacttacgt 420

Query: 421 acagatgaaggctggctgtatctggcagtggtcattgacctgtag 465
           ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 421 acagatgaaggctggctgtatctggcagtggtcattgacctgtgg 465

4) ECO103_1074 in NC_013353


>AF041809|4|G4|3015630|AAC28569.1|Escherichia_coli_172|+|1840..2373|tra5_2|-|transposase 
          Length = 534

 Score = 856 bits (2208), Expect = e-249
 Identities = 434/434 (100%)
 Strand = Plus / Plus

Query: 1   atgaagtatgtctttattgaaaaacatcaggctgagttcagcatcaaagcaatgtgccgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgaagtatgtctttattgaaaaacatcaggctgagttcagcatcaaagcaatgtgccgc 60

Query: 61  gtgctccgggtggcccgcagcggctggtatacgtggtgtcagcggcggacaaggataagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gtgctccgggtggcccgcagcggctggtatacgtggtgtcagcggcggacaaggataagc 120

Query: 121 acgcgtcagcagttccgccaacactgcgacagcgttgtcctcgcggcttttacccggtca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acgcgtcagcagttccgccaacactgcgacagcgttgtcctcgcggcttttacccggtca 180

Query: 181 aaacagcgttacggtgccccacgcctgacggatgaactgcgtgctcagggttaccccttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaacagcgttacggtgccccacgcctgacggatgaactgcgtgctcagggttaccccttt 240

Query: 241 aacgtaaaaaccgtggcggcaagcctgcgccgtcagggactgagggcaaaggcctcccgg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aacgtaaaaaccgtggcggcaagcctgcgccgtcagggactgagggcaaaggcctcccgg 300

Query: 301 aagttcagcccggtcagctaccgcgcacacggcctgcctgtgtcagaaaatctgttggag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagttcagcccggtcagctaccgcgcacacggcctgcctgtgtcagaaaatctgttggag 360

Query: 361 caggatttttacgccagtggcccgaaccagaagtgggcaggagacatcacgtacttacgt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caggatttttacgccagtggcccgaaccagaagtgggcaggagacatcacgtacttacgt 420

Query: 421 acagatgaaggctg 434
           ||||||||||||||
Sbjct: 421 acagatgaaggctg 434

5) E2348_P1_rr__09 in NC_011603


>AF041809|4|G4|3015630|AAC28569.1|Escherichia_coli_172|+|1840..2373|tra5_2|-|transposase 
          Length = 534

 Score = 351 bits (906), Expect = 7e-97
 Identities = 192/213 (90%)
 Strand = Plus / Plus

Query: 214 acgcctgatggatgaactgcgtgcccaaggttaccattttaaagtaaaaaccgtgacgga 273
           |||||||| ||||||||||||||| || |||||||  ||||| |||||||||||| ||| 
Sbjct: 201 acgcctgacggatgaactgcgtgctcagggttacccctttaacgtaaaaaccgtggcggc 260

Query: 274 aagcctgcgccgtcacggactgagggcaaaagcatcctggaatttcagtccggtctgtta 333
           ||||||||||||||| |||||||||||||| || ||| |||| ||||| |||||| | ||
Sbjct: 261 aagcctgcgccgtcagggactgagggcaaaggcctcccggaagttcagcccggtcagcta 320

Query: 334 ctgcgcacacagccagcctgtgtcagaaaatctgctggagcaggatttttacgccagtgg 393
           | |||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 321 ccgcgcacacggcctgcctgtgtcagaaaatctgttggagcaggatttttacgccagtgg 380

Query: 394 cccgaaccagaagtgggcgggagacatcacgta 426
           |||||||||||||||||| ||||||||||||||
Sbjct: 381 cccgaaccagaagtgggcaggagacatcacgta 413


 Score = 177 bits (458), Expect = 1e-44
 Identities = 95/106 (90%)
 Strand = Plus / Plus

Query: 102 ccgcatcggctggtatatgtggtgtcagtggcggataaggataagtacacgtcggcagtt 161
           ||||| ||||||||||| |||||||||| |||||| ||||||||| || |||| ||||||
Sbjct: 75  ccgcagcggctggtatacgtggtgtcagcggcggacaaggataagcacgcgtcagcagtt 134

Query: 162 ccgtcagcactgcgacagcgttgtcctcgttgcttttacccggtca 207
           ||| || ||||||||||||||||||||||  |||||||||||||||
Sbjct: 135 ccgccaacactgcgacagcgttgtcctcgcggcttttacccggtca 180


 Score = 54 bits (139), Expect = 2e-07
 Identities = 30/35 (86%)
 Strand = Plus / Plus

Query: 55 ctgatttcagcatcaagacaatgtaccgcgcgctc 89
          |||| |||||||||||  |||||| ||||| ||||
Sbjct: 32 ctgagttcagcatcaaagcaatgtgccgcgtgctc 66


 Score = 36 bits (92), Expect = 5e-02
 Identities = 20/21 (95%)
 Strand = Plus / Plus

Query: 34 atgaattatgtctttattgaa 54
          ||||| |||||||||||||||
Sbjct: 1  atgaagtatgtctttattgaa 21

6) E2348_P1_028 in NC_011603


>AF041809|4|G4|3015630|AAC28569.1|Escherichia_coli_172|+|1840..2373|tra5_2|-|transposase 
          Length = 534

 Score = 351 bits (906), Expect = 7e-97
 Identities = 192/213 (90%)
 Strand = Plus / Plus

Query: 181 acgcctgatggatgaactgcgtgcccaaggttaccattttaaagtaaaaaccgtgacgga 240
           |||||||| ||||||||||||||| || |||||||  ||||| |||||||||||| ||| 
Sbjct: 201 acgcctgacggatgaactgcgtgctcagggttacccctttaacgtaaaaaccgtggcggc 260

Query: 241 aagcctgcgccgtcacggactgagggcaaaagcatcctggaatttcagtccggtctgtta 300
           ||||||||||||||| |||||||||||||| || ||| |||| ||||| |||||| | ||
Sbjct: 261 aagcctgcgccgtcagggactgagggcaaaggcctcccggaagttcagcccggtcagcta 320

Query: 301 ctgcgcacacagccagcctgtgtcagaaaatctgctggagcaggatttttacgccagtgg 360
           | |||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 321 ccgcgcacacggcctgcctgtgtcagaaaatctgttggagcaggatttttacgccagtgg 380

Query: 361 cccgaaccagaagtgggcgggagacatcacgta 393
           |||||||||||||||||| ||||||||||||||
Sbjct: 381 cccgaaccagaagtgggcaggagacatcacgta 413


 Score = 177 bits (458), Expect = 1e-44
 Identities = 95/106 (90%)
 Strand = Plus / Plus

Query: 69  ccgcatcggctggtatatgtggtgtcagtggcggataaggataagtacacgtcggcagtt 128
           ||||| ||||||||||| |||||||||| |||||| ||||||||| || |||| ||||||
Sbjct: 75  ccgcagcggctggtatacgtggtgtcagcggcggacaaggataagcacgcgtcagcagtt 134

Query: 129 ccgtcagcactgcgacagcgttgtcctcgttgcttttacccggtca 174
           ||| || ||||||||||||||||||||||  |||||||||||||||
Sbjct: 135 ccgccaacactgcgacagcgttgtcctcgcggcttttacccggtca 180


 Score = 54 bits (139), Expect = 2e-07
 Identities = 30/35 (86%)
 Strand = Plus / Plus

Query: 22 ctgatttcagcatcaagacaatgtaccgcgcgctc 56
          |||| |||||||||||  |||||| ||||| ||||
Sbjct: 32 ctgagttcagcatcaaagcaatgtgccgcgtgctc 66


 Score = 36 bits (92), Expect = 5e-02
 Identities = 20/21 (95%)
 Strand = Plus / Plus

Query: 1  atgaattatgtctttattgaa 21
          ||||| |||||||||||||||
Sbjct: 1  atgaagtatgtctttattgaa 21