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Homologs of tagA gene of AF034434

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

• Sequence Alignments

1) tagA in NC_012578


> AF034434|4|G3|3004926|AAC12274.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|4122..7130|tagA|-|toxR-activated 
gene A protein
Length=1002

 Score = 1565 bits (5941),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1001/1002 (99%), Positives = 1002/1002 (100%), Gaps = 0/1002 (0%)

Query  12    VVVRYSLLMKVSFAILIFLVGCNENATSSNDQYLTDPDISEQTKKPSRPIIDEKNKGVTD  71
             +VVRYSLLMKVSFAILIFLVGCNENATSSNDQYLTDPDISEQTKKPSRPIIDEKNKGVTD
Sbjct  1     MVVRYSLLMKVSFAILIFLVGCNENATSSNDQYLTDPDISEQTKKPSRPIIDEKNKGVTD  60

Query  72    TSVTIEWDKIECEKNFSHYNVIVYRKDRIEDVITIRTRNNSVFIDDLKPNSQYSIDVSSC  131
             TSVTIEWDKIECEKNFSHYNVIVYRKDRIEDVITIRTRNNSVFIDDLKPNSQYSIDVSSC
Sbjct  61    TSVTIEWDKIECEKNFSHYNVIVYRKDRIEDVITIRTRNNSVFIDDLKPNSQYSIDVSSC  120

Query  132   LHSACSESAKIEFITLNEIDYYHTTEIEKNVYGSLEGEVRFVQTHVISPEGRKNEPEIIT  191
             LHSACSESAKIEFITLNEIDYYHTTEIEKNVYGSLEGEVRFVQTHVISPEGRKNEPEIIT
Sbjct  121   LHSACSESAKIEFITLNEIDYYHTTEIEKNVYGSLEGEVRFVQTHVISPEGRKNEPEIIT  180

Query  192   GRDALILFKPSIKNSSSILMKIYSEDGLTSKVVMKSPSMLPKTDQPIDIDENNKVVSYSN  251
             GRDALILFKPSIKNSSSILMKIYSEDGLTSKVVMKSPSMLPKTDQPIDIDENNKVVSYSN
Sbjct  181   GRDALILFKPSIKNSSSILMKIYSEDGLTSKVVMKSPSMLPKTDQPIDIDENNKVVSYSN  240

Query  252   SYWSAEIPWNKMKSGMSLHFEDENGNLGIIESERIKFSAPSELIIQNIDLGMLYKPRGRN  311
             SYWSAEIPWNKMKSGMSLHFEDENGNLGIIESERIKFSAPSELIIQNIDLGMLYKPRGRN
Sbjct  241   SYWSAEIPWNKMKSGMSLHFEDENGNLGIIESERIKFSAPSELIIQNIDLGMLYKPRGRN  300

Query  312   IVIKELERTAVDYFQKVPVSKLIFSDYTPIHFEKITLPNGTVYTEKSADIGGWHQGDMRE  371
             IVIKELERTAVDYFQKVPVSKLIFSDYTPIHFEKITLPNGTVYTEKSADIGGWHQGDMRE
Sbjct  301   IVIKELERTAVDYFQKVPVSKLIFSDYTPIHFEKITLPNGTVYTEKSADIGGWHQGDMRE  360

Query  372   AVGKALVSTGINNANLGIVASSGYSQQYNRLTNHITAHTNigyynngvvvhggsggggiv  431
             AVGKALVSTGINNANLGIVASSGYSQQYNRLTNHITAHTNIGYYNNGVVVHGGSGGGGIV
Sbjct  361   AVGKALVSTGINNANLGIVASSGYSQQYNRLTNHITAHTNIGYYNNGVVVHGGSGGGGIV  420

Query  432   TLENTLHNEWSHELGHNYGLGHYVAGGTSHGPDTSWGWDGYYKRFIANFDWKRSPQSNIR  491
             TLENTLHNEWSHELGHNYGLGHYVAGGTSHGPDTSWGWDGYYKRFIANFDWKRSPQSNIR
Sbjct  421   TLENTLHNEWSHELGHNYGLGHYVAGGTSHGPDTSWGWDGYYKRFIANFDWKRSPQSNIR  480

Query  492   PDNQEVVKPFMDKYTYLWDAMSGGYDHQNGIISRYTLHHPYVARIIQDWLKNGAVVINND  551
             PDNQEVVKPFMDKYTYLWDAMSGGYDHQNGIISRYTLHHPYVARIIQDWLKNGAVVINND
Sbjct  481   PDNQEVVKPFMDKYTYLWDAMSGGYDHQNGIISRYTLHHPYVARIIQDWLKNGAVVINND  540

Query  552   YMVWDELKNIYVYKGTNFKVPIKKGVPVVTILGVYDPDKINPSQLYPPTYSNYGNIFDLE  611
             YMVWDELKNIYVYKGTNFKVPIKKGVPVVTILGVYDPDKINPSQLYPPTYSNYGNIFDLE
Sbjct  541   YMVWDELKNIYVYKGTNFKVPIKKGVPVVTILGVYDPDKINPSQLYPPTYSNYGNIFDLE  600

Query  612   KPRSESSLKGWQYVKDVNYLDRVNTHWHTMLVNRKEEKICRFSYLSPKGKKFEFLGYEDI  671
             KPRSESSLKGWQYVKDVNYLDRVNTHWHTMLVNRKEEKICRFSYLSPKGKKFEFLGYEDI
Sbjct  601   KPRSESSLKGWQYVKDVNYLDRVNTHWHTMLVNRKEEKICRFSYLSPKGKKFEFLGYEDI  660

Query  672   ENKICTGGRSIHYLEDGKKNPIESKYNDYFLLSIDGDGEISYVPDSTIGESKICSLKMSG  731
             ENKICTGGRSIHYLEDGKKNPIESKYNDYFLLSIDGDGEISYVPDSTIGESKICSLKMSG
Sbjct  661   ENKICTGGRSIHYLEDGKKNPIESKYNDYFLLSIDGDGEISYVPDSTIGESKICSLKMSG  720

Query  732   TVYGAGFIKGNSCRQIDGVFMNGFQWAFTLNQSGVNSTYTWSNECVLKIKDKDNNIESIS  791
             TVYGAGFIKGNSCRQIDGVFMNGFQWAFTLNQSGVNSTYTWSNECVLKIKDKDNNIESIS
Sbjct  721   TVYGAGFIKGNSCRQIDGVFMNGFQWAFTLNQSGVNSTYTWSNECVLKIKDKDNNIESIS  780

Query  792   IPNYRIEKNQSNKIHLNISREKPIIDINVYCGEHELTSIKVSDNPDIKLLKGPIIVGQEH  851
             IPNYRIEKNQSNKIHLNISREKPIIDINVYCGEHELTSIKVSDNPDIKLLKGPIIVGQEH
Sbjct  781   IPNYRIEKNQSNKIHLNISREKPIIDINVYCGEHELTSIKVSDNPDIKLLKGPIIVGQEH  840

Query  852   GYTSYEPKLPSGWFKHYDNFEPKNEINHELGKMRVNDNDEYICRFNFSDSDREMKFVGYV  911
             GYTSYEPKLPSGWFKHYDNFEPKNEINHELGKMRVNDNDEYICRFNFSDSDREMKFVGYV
Sbjct  841   GYTSYEPKLPSGWFKHYDNFEPKNEINHELGKMRVNDNDEYICRFNFSDSDREMKFVGYV  900

Query  912   SQLSESKYICTGGSEIYYKKNEINIELSSKENDFEWLSVRDKNLVGSKIEFDNNKTLCVL  971
             SQLSESKYICTGGSEIYYKKNEINIELSSKENDFEWLSVRDKNLVGSKIEFDNNKTLCVL
Sbjct  901   SQLSESKYICTGGSEIYYKKNEINIELSSKENDFEWLSVRDKNLVGSKIEFDNNKTLCVL  960

Query  972   DNRSFYGAGYLDENNRCTQDRQIHWSNGKQWLFSTYKTMTYH  1013
             DNRSFYGAGYLDENNRCTQDRQIHWSNGKQWLFSTYKTMTYH
Sbjct  961   DNRSFYGAGYLDENNRCTQDRQIHWSNGKQWLFSTYKTMTYH  1002

2) VCD_003507 in NC_012668


> AF034434|4|G3|3004926|AAC12274.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|4122..7130|tagA|-|toxR-activated 
gene A protein
Length=1002

 Score = 1565 bits (5941),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1001/1002 (99%), Positives = 1002/1002 (100%), Gaps = 0/1002 (0%)

Query  12    VVVRYSLLMKVSFAILIFLVGCNENATSSNDQYLTDPDISEQTKKPSRPIIDEKNKGVTD  71
             +VVRYSLLMKVSFAILIFLVGCNENATSSNDQYLTDPDISEQTKKPSRPIIDEKNKGVTD
Sbjct  1     MVVRYSLLMKVSFAILIFLVGCNENATSSNDQYLTDPDISEQTKKPSRPIIDEKNKGVTD  60

Query  72    TSVTIEWDKIECEKNFSHYNVIVYRKDRIEDVITIRTRNNSVFIDDLKPNSQYSIDVSSC  131
             TSVTIEWDKIECEKNFSHYNVIVYRKDRIEDVITIRTRNNSVFIDDLKPNSQYSIDVSSC
Sbjct  61    TSVTIEWDKIECEKNFSHYNVIVYRKDRIEDVITIRTRNNSVFIDDLKPNSQYSIDVSSC  120

Query  132   LHSACSESAKIEFITLNEIDYYHTTEIEKNVYGSLEGEVRFVQTHVISPEGRKNEPEIIT  191
             LHSACSESAKIEFITLNEIDYYHTTEIEKNVYGSLEGEVRFVQTHVISPEGRKNEPEIIT
Sbjct  121   LHSACSESAKIEFITLNEIDYYHTTEIEKNVYGSLEGEVRFVQTHVISPEGRKNEPEIIT  180

Query  192   GRDALILFKPSIKNSSSILMKIYSEDGLTSKVVMKSPSMLPKTDQPIDIDENNKVVSYSN  251
             GRDALILFKPSIKNSSSILMKIYSEDGLTSKVVMKSPSMLPKTDQPIDIDENNKVVSYSN
Sbjct  181   GRDALILFKPSIKNSSSILMKIYSEDGLTSKVVMKSPSMLPKTDQPIDIDENNKVVSYSN  240

Query  252   SYWSAEIPWNKMKSGMSLHFEDENGNLGIIESERIKFSAPSELIIQNIDLGMLYKPRGRN  311
             SYWSAEIPWNKMKSGMSLHFEDENGNLGIIESERIKFSAPSELIIQNIDLGMLYKPRGRN
Sbjct  241   SYWSAEIPWNKMKSGMSLHFEDENGNLGIIESERIKFSAPSELIIQNIDLGMLYKPRGRN  300

Query  312   IVIKELERTAVDYFQKVPVSKLIFSDYTPIHFEKITLPNGTVYTEKSADIGGWHQGDMRE  371
             IVIKELERTAVDYFQKVPVSKLIFSDYTPIHFEKITLPNGTVYTEKSADIGGWHQGDMRE
Sbjct  301   IVIKELERTAVDYFQKVPVSKLIFSDYTPIHFEKITLPNGTVYTEKSADIGGWHQGDMRE  360

Query  372   AVGKALVSTGINNANLGIVASSGYSQQYNRLTNHITAHTNigyynngvvvhggsggggiv  431
             AVGKALVSTGINNANLGIVASSGYSQQYNRLTNHITAHTNIGYYNNGVVVHGGSGGGGIV
Sbjct  361   AVGKALVSTGINNANLGIVASSGYSQQYNRLTNHITAHTNIGYYNNGVVVHGGSGGGGIV  420

Query  432   TLENTLHNEWSHELGHNYGLGHYVAGGTSHGPDTSWGWDGYYKRFIANFDWKRSPQSNIR  491
             TLENTLHNEWSHELGHNYGLGHYVAGGTSHGPDTSWGWDGYYKRFIANFDWKRSPQSNIR
Sbjct  421   TLENTLHNEWSHELGHNYGLGHYVAGGTSHGPDTSWGWDGYYKRFIANFDWKRSPQSNIR  480

Query  492   PDNQEVVKPFMDKYTYLWDAMSGGYDHQNGIISRYTLHHPYVARIIQDWLKNGAVVINND  551
             PDNQEVVKPFMDKYTYLWDAMSGGYDHQNGIISRYTLHHPYVARIIQDWLKNGAVVINND
Sbjct  481   PDNQEVVKPFMDKYTYLWDAMSGGYDHQNGIISRYTLHHPYVARIIQDWLKNGAVVINND  540

Query  552   YMVWDELKNIYVYKGTNFKVPIKKGVPVVTILGVYDPDKINPSQLYPPTYSNYGNIFDLE  611
             YMVWDELKNIYVYKGTNFKVPIKKGVPVVTILGVYDPDKINPSQLYPPTYSNYGNIFDLE
Sbjct  541   YMVWDELKNIYVYKGTNFKVPIKKGVPVVTILGVYDPDKINPSQLYPPTYSNYGNIFDLE  600

Query  612   KPRSESSLKGWQYVKDVNYLDRVNTHWHTMLVNRKEEKICRFSYLSPKGKKFEFLGYEDI  671
             KPRSESSLKGWQYVKDVNYLDRVNTHWHTMLVNRKEEKICRFSYLSPKGKKFEFLGYEDI
Sbjct  601   KPRSESSLKGWQYVKDVNYLDRVNTHWHTMLVNRKEEKICRFSYLSPKGKKFEFLGYEDI  660

Query  672   ENKICTGGRSIHYLEDGKKNPIESKYNDYFLLSIDGDGEISYVPDSTIGESKICSLKMSG  731
             ENKICTGGRSIHYLEDGKKNPIESKYNDYFLLSIDGDGEISYVPDSTIGESKICSLKMSG
Sbjct  661   ENKICTGGRSIHYLEDGKKNPIESKYNDYFLLSIDGDGEISYVPDSTIGESKICSLKMSG  720

Query  732   TVYGAGFIKGNSCRQIDGVFMNGFQWAFTLNQSGVNSTYTWSNECVLKIKDKDNNIESIS  791
             TVYGAGFIKGNSCRQIDGVFMNGFQWAFTLNQSGVNSTYTWSNECVLKIKDKDNNIESIS
Sbjct  721   TVYGAGFIKGNSCRQIDGVFMNGFQWAFTLNQSGVNSTYTWSNECVLKIKDKDNNIESIS  780

Query  792   IPNYRIEKNQSNKIHLNISREKPIIDINVYCGEHELTSIKVSDNPDIKLLKGPIIVGQEH  851
             IPNYRIEKNQSNKIHLNISREKPIIDINVYCGEHELTSIKVSDNPDIKLLKGPIIVGQEH
Sbjct  781   IPNYRIEKNQSNKIHLNISREKPIIDINVYCGEHELTSIKVSDNPDIKLLKGPIIVGQEH  840

Query  852   GYTSYEPKLPSGWFKHYDNFEPKNEINHELGKMRVNDNDEYICRFNFSDSDREMKFVGYV  911
             GYTSYEPKLPSGWFKHYDNFEPKNEINHELGKMRVNDNDEYICRFNFSDSDREMKFVGYV
Sbjct  841   GYTSYEPKLPSGWFKHYDNFEPKNEINHELGKMRVNDNDEYICRFNFSDSDREMKFVGYV  900

Query  912   SQLSESKYICTGGSEIYYKKNEINIELSSKENDFEWLSVRDKNLVGSKIEFDNNKTLCVL  971
             SQLSESKYICTGGSEIYYKKNEINIELSSKENDFEWLSVRDKNLVGSKIEFDNNKTLCVL
Sbjct  901   SQLSESKYICTGGSEIYYKKNEINIELSSKENDFEWLSVRDKNLVGSKIEFDNNKTLCVL  960

Query  972   DNRSFYGAGYLDENNRCTQDRQIHWSNGKQWLFSTYKTMTYH  1013
             DNRSFYGAGYLDENNRCTQDRQIHWSNGKQWLFSTYKTMTYH
Sbjct  961   DNRSFYGAGYLDENNRCTQDRQIHWSNGKQWLFSTYKTMTYH  1002

3) VC0820 in NC_002505


> AF034434|4|G3|3004926|AAC12274.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|4122..7130|tagA|-|toxR-activated 
gene A protein
Length=1002

 Score = 1565 bits (5941),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1001/1002 (99%), Positives = 1002/1002 (100%), Gaps = 0/1002 (0%)

Query  12    VVVRYSLLMKVSFAILIFLVGCNENATSSNDQYLTDPDISEQTKKPSRPIIDEKNKGVTD  71
             +VVRYSLLMKVSFAILIFLVGCNENATSSNDQYLTDPDISEQTKKPSRPIIDEKNKGVTD
Sbjct  1     MVVRYSLLMKVSFAILIFLVGCNENATSSNDQYLTDPDISEQTKKPSRPIIDEKNKGVTD  60

Query  72    TSVTIEWDKIECEKNFSHYNVIVYRKDRIEDVITIRTRNNSVFIDDLKPNSQYSIDVSSC  131
             TSVTIEWDKIECEKNFSHYNVIVYRKDRIEDVITIRTRNNSVFIDDLKPNSQYSIDVSSC
Sbjct  61    TSVTIEWDKIECEKNFSHYNVIVYRKDRIEDVITIRTRNNSVFIDDLKPNSQYSIDVSSC  120

Query  132   LHSACSESAKIEFITLNEIDYYHTTEIEKNVYGSLEGEVRFVQTHVISPEGRKNEPEIIT  191
             LHSACSESAKIEFITLNEIDYYHTTEIEKNVYGSLEGEVRFVQTHVISPEGRKNEPEIIT
Sbjct  121   LHSACSESAKIEFITLNEIDYYHTTEIEKNVYGSLEGEVRFVQTHVISPEGRKNEPEIIT  180

Query  192   GRDALILFKPSIKNSSSILMKIYSEDGLTSKVVMKSPSMLPKTDQPIDIDENNKVVSYSN  251
             GRDALILFKPSIKNSSSILMKIYSEDGLTSKVVMKSPSMLPKTDQPIDIDENNKVVSYSN
Sbjct  181   GRDALILFKPSIKNSSSILMKIYSEDGLTSKVVMKSPSMLPKTDQPIDIDENNKVVSYSN  240

Query  252   SYWSAEIPWNKMKSGMSLHFEDENGNLGIIESERIKFSAPSELIIQNIDLGMLYKPRGRN  311
             SYWSAEIPWNKMKSGMSLHFEDENGNLGIIESERIKFSAPSELIIQNIDLGMLYKPRGRN
Sbjct  241   SYWSAEIPWNKMKSGMSLHFEDENGNLGIIESERIKFSAPSELIIQNIDLGMLYKPRGRN  300

Query  312   IVIKELERTAVDYFQKVPVSKLIFSDYTPIHFEKITLPNGTVYTEKSADIGGWHQGDMRE  371
             IVIKELERTAVDYFQKVPVSKLIFSDYTPIHFEKITLPNGTVYTEKSADIGGWHQGDMRE
Sbjct  301   IVIKELERTAVDYFQKVPVSKLIFSDYTPIHFEKITLPNGTVYTEKSADIGGWHQGDMRE  360

Query  372   AVGKALVSTGINNANLGIVASSGYSQQYNRLTNHITAHTNigyynngvvvhggsggggiv  431
             AVGKALVSTGINNANLGIVASSGYSQQYNRLTNHITAHTNIGYYNNGVVVHGGSGGGGIV
Sbjct  361   AVGKALVSTGINNANLGIVASSGYSQQYNRLTNHITAHTNIGYYNNGVVVHGGSGGGGIV  420

Query  432   TLENTLHNEWSHELGHNYGLGHYVAGGTSHGPDTSWGWDGYYKRFIANFDWKRSPQSNIR  491
             TLENTLHNEWSHELGHNYGLGHYVAGGTSHGPDTSWGWDGYYKRFIANFDWKRSPQSNIR
Sbjct  421   TLENTLHNEWSHELGHNYGLGHYVAGGTSHGPDTSWGWDGYYKRFIANFDWKRSPQSNIR  480

Query  492   PDNQEVVKPFMDKYTYLWDAMSGGYDHQNGIISRYTLHHPYVARIIQDWLKNGAVVINND  551
             PDNQEVVKPFMDKYTYLWDAMSGGYDHQNGIISRYTLHHPYVARIIQDWLKNGAVVINND
Sbjct  481   PDNQEVVKPFMDKYTYLWDAMSGGYDHQNGIISRYTLHHPYVARIIQDWLKNGAVVINND  540

Query  552   YMVWDELKNIYVYKGTNFKVPIKKGVPVVTILGVYDPDKINPSQLYPPTYSNYGNIFDLE  611
             YMVWDELKNIYVYKGTNFKVPIKKGVPVVTILGVYDPDKINPSQLYPPTYSNYGNIFDLE
Sbjct  541   YMVWDELKNIYVYKGTNFKVPIKKGVPVVTILGVYDPDKINPSQLYPPTYSNYGNIFDLE  600

Query  612   KPRSESSLKGWQYVKDVNYLDRVNTHWHTMLVNRKEEKICRFSYLSPKGKKFEFLGYEDI  671
             KPRSESSLKGWQYVKDVNYLDRVNTHWHTMLVNRKEEKICRFSYLSPKGKKFEFLGYEDI
Sbjct  601   KPRSESSLKGWQYVKDVNYLDRVNTHWHTMLVNRKEEKICRFSYLSPKGKKFEFLGYEDI  660

Query  672   ENKICTGGRSIHYLEDGKKNPIESKYNDYFLLSIDGDGEISYVPDSTIGESKICSLKMSG  731
             ENKICTGGRSIHYLEDGKKNPIESKYNDYFLLSIDGDGEISYVPDSTIGESKICSLKMSG
Sbjct  661   ENKICTGGRSIHYLEDGKKNPIESKYNDYFLLSIDGDGEISYVPDSTIGESKICSLKMSG  720

Query  732   TVYGAGFIKGNSCRQIDGVFMNGFQWAFTLNQSGVNSTYTWSNECVLKIKDKDNNIESIS  791
             TVYGAGFIKGNSCRQIDGVFMNGFQWAFTLNQSGVNSTYTWSNECVLKIKDKDNNIESIS
Sbjct  721   TVYGAGFIKGNSCRQIDGVFMNGFQWAFTLNQSGVNSTYTWSNECVLKIKDKDNNIESIS  780

Query  792   IPNYRIEKNQSNKIHLNISREKPIIDINVYCGEHELTSIKVSDNPDIKLLKGPIIVGQEH  851
             IPNYRIEKNQSNKIHLNISREKPIIDINVYCGEHELTSIKVSDNPDIKLLKGPIIVGQEH
Sbjct  781   IPNYRIEKNQSNKIHLNISREKPIIDINVYCGEHELTSIKVSDNPDIKLLKGPIIVGQEH  840

Query  852   GYTSYEPKLPSGWFKHYDNFEPKNEINHELGKMRVNDNDEYICRFNFSDSDREMKFVGYV  911
             GYTSYEPKLPSGWFKHYDNFEPKNEINHELGKMRVNDNDEYICRFNFSDSDREMKFVGYV
Sbjct  841   GYTSYEPKLPSGWFKHYDNFEPKNEINHELGKMRVNDNDEYICRFNFSDSDREMKFVGYV  900

Query  912   SQLSESKYICTGGSEIYYKKNEINIELSSKENDFEWLSVRDKNLVGSKIEFDNNKTLCVL  971
             SQLSESKYICTGGSEIYYKKNEINIELSSKENDFEWLSVRDKNLVGSKIEFDNNKTLCVL
Sbjct  901   SQLSESKYICTGGSEIYYKKNEINIELSSKENDFEWLSVRDKNLVGSKIEFDNNKTLCVL  960

Query  972   DNRSFYGAGYLDENNRCTQDRQIHWSNGKQWLFSTYKTMTYH  1013
             DNRSFYGAGYLDENNRCTQDRQIHWSNGKQWLFSTYKTMTYH
Sbjct  961   DNRSFYGAGYLDENNRCTQDRQIHWSNGKQWLFSTYKTMTYH  1002

4) O3Y_03815 in NC_016944


> AF034434|4|G3|3004926|AAC12274.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|4122..7130|tagA|-|toxR-activated 
gene A protein
Length=1002

 Score = 1563 bits (5936),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1000/1001 (99%), Positives = 1001/1001 (100%), Gaps = 0/1001 (0%)

Query  1     MVRYSLLMKVSFAILIFLVGCNENATSSNDQYLTDPDISEQTKKPSRPIIDEKNKGVTDT  60
             +VRYSLLMKVSFAILIFLVGCNENATSSNDQYLTDPDISEQTKKPSRPIIDEKNKGVTDT
Sbjct  2     VVRYSLLMKVSFAILIFLVGCNENATSSNDQYLTDPDISEQTKKPSRPIIDEKNKGVTDT  61

Query  61    SVTIEWDKIECEKNFSHYNVIVYRKDRIEDVITIRTRNNSVFIDDLKPNSQYSIDVSSCL  120
             SVTIEWDKIECEKNFSHYNVIVYRKDRIEDVITIRTRNNSVFIDDLKPNSQYSIDVSSCL
Sbjct  62    SVTIEWDKIECEKNFSHYNVIVYRKDRIEDVITIRTRNNSVFIDDLKPNSQYSIDVSSCL  121

Query  121   HSACSESAKIEFITLNEIDYYHTTEIEKNVYGSLEGEVRFVQTHVISPEGRKNEPEIITG  180
             HSACSESAKIEFITLNEIDYYHTTEIEKNVYGSLEGEVRFVQTHVISPEGRKNEPEIITG
Sbjct  122   HSACSESAKIEFITLNEIDYYHTTEIEKNVYGSLEGEVRFVQTHVISPEGRKNEPEIITG  181

Query  181   RDALILFKPSIKNSSSILMKIYSEDGLTSKVVMKSPSMLPKTDQPIDIDENNKVVSYSNS  240
             RDALILFKPSIKNSSSILMKIYSEDGLTSKVVMKSPSMLPKTDQPIDIDENNKVVSYSNS
Sbjct  182   RDALILFKPSIKNSSSILMKIYSEDGLTSKVVMKSPSMLPKTDQPIDIDENNKVVSYSNS  241

Query  241   YWSAEIPWNKMKSGMSLHFEDENGNLGIIESERIKFSAPSELIIQNIDLGMLYKPRGRNI  300
             YWSAEIPWNKMKSGMSLHFEDENGNLGIIESERIKFSAPSELIIQNIDLGMLYKPRGRNI
Sbjct  242   YWSAEIPWNKMKSGMSLHFEDENGNLGIIESERIKFSAPSELIIQNIDLGMLYKPRGRNI  301

Query  301   VIKELERTAVDYFQKVPVSKLIFSDYTPIHFEKITLPNGTVYTEKSADIGGWHQGDMREA  360
             VIKELERTAVDYFQKVPVSKLIFSDYTPIHFEKITLPNGTVYTEKSADIGGWHQGDMREA
Sbjct  302   VIKELERTAVDYFQKVPVSKLIFSDYTPIHFEKITLPNGTVYTEKSADIGGWHQGDMREA  361

Query  361   VGKALVSTGINNANLGIVASSGYSQQYNRLTNHITAHTNigyynngvvvhggsggggivT  420
             VGKALVSTGINNANLGIVASSGYSQQYNRLTNHITAHTNIGYYNNGVVVHGGSGGGGIVT
Sbjct  362   VGKALVSTGINNANLGIVASSGYSQQYNRLTNHITAHTNIGYYNNGVVVHGGSGGGGIVT  421

Query  421   LENTLHNEWSHELGHNYGLGHYVAGGTSHGPDTSWGWDGYYKRFIANFDWKRSPQSNIRP  480
             LENTLHNEWSHELGHNYGLGHYVAGGTSHGPDTSWGWDGYYKRFIANFDWKRSPQSNIRP
Sbjct  422   LENTLHNEWSHELGHNYGLGHYVAGGTSHGPDTSWGWDGYYKRFIANFDWKRSPQSNIRP  481

Query  481   DNQEVVKPFMDKYTYLWDAMSGGYDHQNGIISRYTLHHPYVARIIQDWLKNGAVVINNDY  540
             DNQEVVKPFMDKYTYLWDAMSGGYDHQNGIISRYTLHHPYVARIIQDWLKNGAVVINNDY
Sbjct  482   DNQEVVKPFMDKYTYLWDAMSGGYDHQNGIISRYTLHHPYVARIIQDWLKNGAVVINNDY  541

Query  541   MVWDELKNIYVYKGTNFKVPIKKGVPVVTILGVYDPDKINPSQLYPPTYSNYGNIFDLEK  600
             MVWDELKNIYVYKGTNFKVPIKKGVPVVTILGVYDPDKINPSQLYPPTYSNYGNIFDLEK
Sbjct  542   MVWDELKNIYVYKGTNFKVPIKKGVPVVTILGVYDPDKINPSQLYPPTYSNYGNIFDLEK  601

Query  601   PRSESSLKGWQYVKDVNYLDRVNTHWHTMLVNRKEEKICRFSYLSPKGKKFEFLGYEDIE  660
             PRSESSLKGWQYVKDVNYLDRVNTHWHTMLVNRKEEKICRFSYLSPKGKKFEFLGYEDIE
Sbjct  602   PRSESSLKGWQYVKDVNYLDRVNTHWHTMLVNRKEEKICRFSYLSPKGKKFEFLGYEDIE  661

Query  661   NKICTGGRSIHYLEDGKKNPIESKYNDYFLLSIDGDGEISYVPDSTIGESKICSLKMSGT  720
             NKICTGGRSIHYLEDGKKNPIESKYNDYFLLSIDGDGEISYVPDSTIGESKICSLKMSGT
Sbjct  662   NKICTGGRSIHYLEDGKKNPIESKYNDYFLLSIDGDGEISYVPDSTIGESKICSLKMSGT  721

Query  721   VYGAGFIKGNSCRQIDGVFMNGFQWAFTLNQSGVNSTYTWSNECVLKIKDKDNNIESISI  780
             VYGAGFIKGNSCRQIDGVFMNGFQWAFTLNQSGVNSTYTWSNECVLKIKDKDNNIESISI
Sbjct  722   VYGAGFIKGNSCRQIDGVFMNGFQWAFTLNQSGVNSTYTWSNECVLKIKDKDNNIESISI  781

Query  781   PNYRIEKNQSNKIHLNISREKPIIDINVYCGEHELTSIKVSDNPDIKLLKGPIIVGQEHG  840
             PNYRIEKNQSNKIHLNISREKPIIDINVYCGEHELTSIKVSDNPDIKLLKGPIIVGQEHG
Sbjct  782   PNYRIEKNQSNKIHLNISREKPIIDINVYCGEHELTSIKVSDNPDIKLLKGPIIVGQEHG  841

Query  841   YTSYEPKLPSGWFKHYDNFEPKNEINHELGKMRVNDNDEYICRFNFSDSDREMKFVGYVS  900
             YTSYEPKLPSGWFKHYDNFEPKNEINHELGKMRVNDNDEYICRFNFSDSDREMKFVGYVS
Sbjct  842   YTSYEPKLPSGWFKHYDNFEPKNEINHELGKMRVNDNDEYICRFNFSDSDREMKFVGYVS  901

Query  901   QLSESKYICTGGSEIYYKKNEINIELSSKENDFEWLSVRDKNLVGSKIEFDNNKTLCVLD  960
             QLSESKYICTGGSEIYYKKNEINIELSSKENDFEWLSVRDKNLVGSKIEFDNNKTLCVLD
Sbjct  902   QLSESKYICTGGSEIYYKKNEINIELSSKENDFEWLSVRDKNLVGSKIEFDNNKTLCVLD  961

Query  961   NRSFYGAGYLDENNRCTQDRQIHWSNGKQWLFSTYKTMTYH  1001
             NRSFYGAGYLDENNRCTQDRQIHWSNGKQWLFSTYKTMTYH
Sbjct  962   NRSFYGAGYLDENNRCTQDRQIHWSNGKQWLFSTYKTMTYH  1002

5) tagA in NC_012582


> AF034434|4|G3|3004926|AAC12274.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|4122..7130|tagA|-|toxR-activated 
gene A protein
Length=1002

 Score = 1563 bits (5935),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 997/1002 (99%), Positives = 1002/1002 (100%), Gaps = 0/1002 (0%)

Query  12    VVVRYSLLMKVSFAILIFLVGCNENATSSNDQYLTDPDISEQTKKPSRPIIDEKNKGVTD  71
             +VVRYSLLMKVSFAILIFLVGCNENATSSNDQYLTDPDISEQTKKPSRPIIDEKNKGVTD
Sbjct  1     MVVRYSLLMKVSFAILIFLVGCNENATSSNDQYLTDPDISEQTKKPSRPIIDEKNKGVTD  60

Query  72    TSVTIEWDKIECEKNFSHYNVIVYRKDRIEDVITIRTRNNSVFIDDLKPNSQYSIDVSSC  131
             TSVTIEWDKIECEKNFSHYNVIVYRKDRIEDVITIRTRNNSVFIDDLKPNSQYSIDVSSC
Sbjct  61    TSVTIEWDKIECEKNFSHYNVIVYRKDRIEDVITIRTRNNSVFIDDLKPNSQYSIDVSSC  120

Query  132   LHSACSESAKIEFITLNEIDYYHTTEIEKNVYGSLEGEVRFVQTHVISPEGRKNEPEIIT  191
             LHSACSESAKIEFITLNEIDYYHTTEIEKNVYGSLEGEVRFVQTHVISPEGRKNEPEIIT
Sbjct  121   LHSACSESAKIEFITLNEIDYYHTTEIEKNVYGSLEGEVRFVQTHVISPEGRKNEPEIIT  180

Query  192   GRDALILFKPSIKNSSSILMKIYSEDGLTSKVVMKSPSMLPKTDQPIDIDENNKVVSYSN  251
             GRDALILFKPSIKNSSSILMKIYSEDGLTSKVVMKSPSMLPKTDQPIDIDENNKVVSYSN
Sbjct  181   GRDALILFKPSIKNSSSILMKIYSEDGLTSKVVMKSPSMLPKTDQPIDIDENNKVVSYSN  240

Query  252   SYWSAEIPWNKMKSGMSLHFEDENGNLGIIESERIKFSAPSELIIQNIDLGMLYKPRGRN  311
             SYWSAEIPWNKMKSGMSLHFEDENGNLGIIESERIKFSAPSELIIQNIDLGMLYKPRGRN
Sbjct  241   SYWSAEIPWNKMKSGMSLHFEDENGNLGIIESERIKFSAPSELIIQNIDLGMLYKPRGRN  300

Query  312   IVIKELERTAVDYFQKVPVSKLIFSDYTPIHFEKITLPNGSVYTEKSADIGGWHQGDMRE  371
             IVIKELERTAVDYFQKVPVSKLIFSDYTPIHFEKITLPNG+VYTEKSADIGGWHQGDMRE
Sbjct  301   IVIKELERTAVDYFQKVPVSKLIFSDYTPIHFEKITLPNGTVYTEKSADIGGWHQGDMRE  360

Query  372   AVGKALVSTGINNANLGIVASSGYSQQYNRLTNHITAHTNigyynngvvvhggsggggiv  431
             AVGKALVSTGINNANLGIVASSGYSQQYNRLTNHITAHTNIGYYNNGVVVHGGSGGGGIV
Sbjct  361   AVGKALVSTGINNANLGIVASSGYSQQYNRLTNHITAHTNIGYYNNGVVVHGGSGGGGIV  420

Query  432   TLENTLHNEWSHELGHNYGLGHYVAGGTSHGPDTSWGWDGYYKRFIANFDWKRSPQSNIR  491
             TLENTLHNEWSHELGHNYGLGHYVAGGTSHGPDTSWGWDGYYKRFIANFDWKRSPQSNIR
Sbjct  421   TLENTLHNEWSHELGHNYGLGHYVAGGTSHGPDTSWGWDGYYKRFIANFDWKRSPQSNIR  480

Query  492   PDNQEVVKPFMDKYTYLWDAMSGGYDHQNGIISRYTLHHPYVARIIQDWLKNGAVVINND  551
             PDNQEVVKPFMDKYTYLWDAMSGGYDHQNGIISRYTLHHPYVARIIQDWLKNGAVVINND
Sbjct  481   PDNQEVVKPFMDKYTYLWDAMSGGYDHQNGIISRYTLHHPYVARIIQDWLKNGAVVINND  540

Query  552   YMVWDELKNIYVYKGTNFKVPIKKGVPVVTILGVYDPDKINPSQLYPPTYSNYGNIFDLE  611
             YMVWDELKNIYVYKGTNFKVPIKKGVPVVTILGVYDPDKINPSQLYPPTYSNYGNIFDLE
Sbjct  541   YMVWDELKNIYVYKGTNFKVPIKKGVPVVTILGVYDPDKINPSQLYPPTYSNYGNIFDLE  600

Query  612   KPRSESSLKGWQYVKDVNYLDRVNTHWHTMLVNRKEEKICRFSYLSPKGKKFEFLGYEDI  671
             KPRSESSLKGWQYVKDVNYLDRVNTHWHTMLVNRKEEKICRFSYLSPKGKKFEFLGYEDI
Sbjct  601   KPRSESSLKGWQYVKDVNYLDRVNTHWHTMLVNRKEEKICRFSYLSPKGKKFEFLGYEDI  660

Query  672   ENKICTGSRSIHYLEDGKKNPIESKYNDYFLLSIDGDGEISYVPDSTIGESKICSLKMSG  731
             ENKICTG+RSIHYLEDGKKNPIESKYNDYFLLSIDGDGEISYVPDSTIGESKICSLKMSG
Sbjct  661   ENKICTGGRSIHYLEDGKKNPIESKYNDYFLLSIDGDGEISYVPDSTIGESKICSLKMSG  720

Query  732   TVYGAGFIKGNSCRQIDGVFMNGFQWAFTLNQSGVNSTYTWSNECVLKIKDKDNNIESIS  791
             TVYGAGFIKGNSCRQIDGVFMNGFQWAFTLNQSGVNSTYTWSNECVLKIKDKDNNIESIS
Sbjct  721   TVYGAGFIKGNSCRQIDGVFMNGFQWAFTLNQSGVNSTYTWSNECVLKIKDKDNNIESIS  780

Query  792   IPNYRIEKNQSNKIHLNISREKPIIDINVYCGEHELTSIKVSDNPDIKLLKGPIIVGQEH  851
             IPNYRIEKNQSNKIHLNISREKPIIDINVYCGEHELTSIKVSDNPDIKLLKGPIIVGQEH
Sbjct  781   IPNYRIEKNQSNKIHLNISREKPIIDINVYCGEHELTSIKVSDNPDIKLLKGPIIVGQEH  840

Query  852   GYTSYEPKLPSGWFKHYDNFEPKNEINHELGKMRVNDNDEYICRFNFSDSDREMKFVGYV  911
             GYTSYEPKLPSGWFKHYDNFEPKNEINHELGKMRVNDNDEYICRFNFSDSDREMKFVGYV
Sbjct  841   GYTSYEPKLPSGWFKHYDNFEPKNEINHELGKMRVNDNDEYICRFNFSDSDREMKFVGYV  900

Query  912   SQLSESKYICTGGSEIYYKKNDINIELSSKENDFEWLSVRDKNLIGSKIEFDNNKTLCVL  971
             SQLSESKYICTGGSEIYYKKN+INIELSSKENDFEWLSVRDKNL+GSKIEFDNNKTLCVL
Sbjct  901   SQLSESKYICTGGSEIYYKKNEINIELSSKENDFEWLSVRDKNLVGSKIEFDNNKTLCVL  960

Query  972   DNRSFYGAGYLDENNRCTQDRQIHWSNGKQWLFSTYKTMTYH  1013
             DNRSFYGAGYLDENNRCTQDRQIHWSNGKQWLFSTYKTMTYH
Sbjct  961   DNRSFYGAGYLDENNRCTQDRQIHWSNGKQWLFSTYKTMTYH  1002

6) tagA in NC_009457


> AF034434|4|G3|3004926|AAC12274.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|4122..7130|tagA|-|toxR-activated 
gene A protein
Length=1002

 Score = 1563 bits (5935),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 997/1002 (99%), Positives = 1002/1002 (100%), Gaps = 0/1002 (0%)

Query  12    VVVRYSLLMKVSFAILIFLVGCNENATSSNDQYLTDPDISEQTKKPSRPIIDEKNKGVTD  71
             +VVRYSLLMKVSFAILIFLVGCNENATSSNDQYLTDPDISEQTKKPSRPIIDEKNKGVTD
Sbjct  1     MVVRYSLLMKVSFAILIFLVGCNENATSSNDQYLTDPDISEQTKKPSRPIIDEKNKGVTD  60

Query  72    TSVTIEWDKIECEKNFSHYNVIVYRKDRIEDVITIRTRNNSVFIDDLKPNSQYSIDVSSC  131
             TSVTIEWDKIECEKNFSHYNVIVYRKDRIEDVITIRTRNNSVFIDDLKPNSQYSIDVSSC
Sbjct  61    TSVTIEWDKIECEKNFSHYNVIVYRKDRIEDVITIRTRNNSVFIDDLKPNSQYSIDVSSC  120

Query  132   LHSACSESAKIEFITLNEIDYYHTTEIEKNVYGSLEGEVRFVQTHVISPEGRKNEPEIIT  191
             LHSACSESAKIEFITLNEIDYYHTTEIEKNVYGSLEGEVRFVQTHVISPEGRKNEPEIIT
Sbjct  121   LHSACSESAKIEFITLNEIDYYHTTEIEKNVYGSLEGEVRFVQTHVISPEGRKNEPEIIT  180

Query  192   GRDALILFKPSIKNSSSILMKIYSEDGLTSKVVMKSPSMLPKTDQPIDIDENNKVVSYSN  251
             GRDALILFKPSIKNSSSILMKIYSEDGLTSKVVMKSPSMLPKTDQPIDIDENNKVVSYSN
Sbjct  181   GRDALILFKPSIKNSSSILMKIYSEDGLTSKVVMKSPSMLPKTDQPIDIDENNKVVSYSN  240

Query  252   SYWSAEIPWNKMKSGMSLHFEDENGNLGIIESERIKFSAPSELIIQNIDLGMLYKPRGRN  311
             SYWSAEIPWNKMKSGMSLHFEDENGNLGIIESERIKFSAPSELIIQNIDLGMLYKPRGRN
Sbjct  241   SYWSAEIPWNKMKSGMSLHFEDENGNLGIIESERIKFSAPSELIIQNIDLGMLYKPRGRN  300

Query  312   IVIKELERTAVDYFQKVPVSKLIFSDYTPIHFEKITLPNGSVYTEKSADIGGWHQGDMRE  371
             IVIKELERTAVDYFQKVPVSKLIFSDYTPIHFEKITLPNG+VYTEKSADIGGWHQGDMRE
Sbjct  301   IVIKELERTAVDYFQKVPVSKLIFSDYTPIHFEKITLPNGTVYTEKSADIGGWHQGDMRE  360

Query  372   AVGKALVSTGINNANLGIVASSGYSQQYNRLTNHITAHTNigyynngvvvhggsggggiv  431
             AVGKALVSTGINNANLGIVASSGYSQQYNRLTNHITAHTNIGYYNNGVVVHGGSGGGGIV
Sbjct  361   AVGKALVSTGINNANLGIVASSGYSQQYNRLTNHITAHTNIGYYNNGVVVHGGSGGGGIV  420

Query  432   TLENTLHNEWSHELGHNYGLGHYVAGGTSHGPDTSWGWDGYYKRFIANFDWKRSPQSNIR  491
             TLENTLHNEWSHELGHNYGLGHYVAGGTSHGPDTSWGWDGYYKRFIANFDWKRSPQSNIR
Sbjct  421   TLENTLHNEWSHELGHNYGLGHYVAGGTSHGPDTSWGWDGYYKRFIANFDWKRSPQSNIR  480

Query  492   PDNQEVVKPFMDKYTYLWDAMSGGYDHQNGIISRYTLHHPYVARIIQDWLKNGAVVINND  551
             PDNQEVVKPFMDKYTYLWDAMSGGYDHQNGIISRYTLHHPYVARIIQDWLKNGAVVINND
Sbjct  481   PDNQEVVKPFMDKYTYLWDAMSGGYDHQNGIISRYTLHHPYVARIIQDWLKNGAVVINND  540

Query  552   YMVWDELKNIYVYKGTNFKVPIKKGVPVVTILGVYDPDKINPSQLYPPTYSNYGNIFDLE  611
             YMVWDELKNIYVYKGTNFKVPIKKGVPVVTILGVYDPDKINPSQLYPPTYSNYGNIFDLE
Sbjct  541   YMVWDELKNIYVYKGTNFKVPIKKGVPVVTILGVYDPDKINPSQLYPPTYSNYGNIFDLE  600

Query  612   KPRSESSLKGWQYVKDVNYLDRVNTHWHTMLVNRKEEKICRFSYLSPKGKKFEFLGYEDI  671
             KPRSESSLKGWQYVKDVNYLDRVNTHWHTMLVNRKEEKICRFSYLSPKGKKFEFLGYEDI
Sbjct  601   KPRSESSLKGWQYVKDVNYLDRVNTHWHTMLVNRKEEKICRFSYLSPKGKKFEFLGYEDI  660

Query  672   ENKICTGSRSIHYLEDGKKNPIESKYNDYFLLSIDGDGEISYVPDSTIGESKICSLKMSG  731
             ENKICTG+RSIHYLEDGKKNPIESKYNDYFLLSIDGDGEISYVPDSTIGESKICSLKMSG
Sbjct  661   ENKICTGGRSIHYLEDGKKNPIESKYNDYFLLSIDGDGEISYVPDSTIGESKICSLKMSG  720

Query  732   TVYGAGFIKGNSCRQIDGVFMNGFQWAFTLNQSGVNSTYTWSNECVLKIKDKDNNIESIS  791
             TVYGAGFIKGNSCRQIDGVFMNGFQWAFTLNQSGVNSTYTWSNECVLKIKDKDNNIESIS
Sbjct  721   TVYGAGFIKGNSCRQIDGVFMNGFQWAFTLNQSGVNSTYTWSNECVLKIKDKDNNIESIS  780

Query  792   IPNYRIEKNQSNKIHLNISREKPIIDINVYCGEHELTSIKVSDNPDIKLLKGPIIVGQEH  851
             IPNYRIEKNQSNKIHLNISREKPIIDINVYCGEHELTSIKVSDNPDIKLLKGPIIVGQEH
Sbjct  781   IPNYRIEKNQSNKIHLNISREKPIIDINVYCGEHELTSIKVSDNPDIKLLKGPIIVGQEH  840

Query  852   GYTSYEPKLPSGWFKHYDNFEPKNEINHELGKMRVNDNDEYICRFNFSDSDREMKFVGYV  911
             GYTSYEPKLPSGWFKHYDNFEPKNEINHELGKMRVNDNDEYICRFNFSDSDREMKFVGYV
Sbjct  841   GYTSYEPKLPSGWFKHYDNFEPKNEINHELGKMRVNDNDEYICRFNFSDSDREMKFVGYV  900

Query  912   SQLSESKYICTGGSEIYYKKNDINIELSSKENDFEWLSVRDKNLIGSKIEFDNNKTLCVL  971
             SQLSESKYICTGGSEIYYKKN+INIELSSKENDFEWLSVRDKNL+GSKIEFDNNKTLCVL
Sbjct  901   SQLSESKYICTGGSEIYYKKNEINIELSSKENDFEWLSVRDKNLVGSKIEFDNNKTLCVL  960

Query  972   DNRSFYGAGYLDENNRCTQDRQIHWSNGKQWLFSTYKTMTYH  1013
             DNRSFYGAGYLDENNRCTQDRQIHWSNGKQWLFSTYKTMTYH
Sbjct  961   DNRSFYGAGYLDENNRCTQDRQIHWSNGKQWLFSTYKTMTYH  1002