Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
secretion system apparatus protein SsaV |
NC_016857 (Salmonella enterica ST4/74) |
0.0 |
99 |
|
secretion system apparatus protein SsaV |
NC_011094 (Salmonella enterica CVM19633) |
0.0 |
100 |
|
secretion system apparatus protein SsaV |
NC_006905 (Salmonella enterica SC-B67) |
0.0 |
100 |
|
secretion system apparatus protein SsaV |
NC_011147 (Salmonella enterica AKU12601) |
0.0 |
99 |
|
Secretion system apparatus |
NC_006511 (Salmonella enterica ATCC 9150) |
0.0 |
99 |
|
secretion system apparatus protein SsaV |
NC_020307 (Salmonella enterica CFSAN001992) |
0.0 |
99 |
|
secretion system apparatus protein SsaV |
NC_021818 (Salmonella enterica CFSAN002050) |
0.0 |
99 |
|
secretion system apparatus protein SsaV |
NC_011149 (Salmonella enterica SL483) |
0.0 |
99 |
|
secretion system apparatus protein SsaV |
NC_021820 (Salmonella enterica 08-1736) |
0.0 |
99 |
|
secretion system apparatus protein SsaV |
NC_016856 (Salmonella enterica 14028S) |
0.0 |
99 |
|
secretion system apparatus protein SsaV |
NC_011274 (Salmonella enterica 287/91) |
0.0 |
99 |
|
hypothetical protein |
NC_022241 (Salmonella enterica 3114) |
0.0 |
99 |
|
secretion system apparatus protein SsaV |
NC_021810 (Salmonella enterica 41578) |
0.0 |
99 |
|
Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV) |
NC_017623 (Salmonella enterica B182) |
0.0 |
99 |
|
putative type III secretion protein |
NC_022221 (Salmonella enterica CDC1983-67) |
0.0 |
99 |
|
secretion system apparatus protein SsaV |
NC_021844 (Salmonella enterica CFSAN000189) |
0.0 |
99 |
|
secretion system apparatus protein SsaV |
NC_021814 (Salmonella enterica CFSAN001921) |
0.0 |
99 |
|
secretion system apparatus protein SsaV |
NC_021812 (Salmonella enterica CFSAN002069) |
0.0 |
99 |
|
secretion system apparatus protein SsaV |
NC_011205 (Salmonella enterica CT_02021853) |
0.0 |
99 |
|
putative type III secretion protein |
NC_016854 (Salmonella enterica D23580) |
0.0 |
99 |
|
secretion system apparatus protein SsaV |
NC_003197 (Salmonella enterica LT2) |
0.0 |
99 |
|
secretion system apparatus protein SsaV |
NC_011294 (Salmonella enterica P125109) |
0.0 |
99 |
|
putative type III secretion protein |
NC_016831 (Salmonella enterica RKS5078) |
0.0 |
99 |
|
secretion system apparatus protein SsaV |
NC_021984 (Salmonella enterica S06004) |
0.0 |
99 |
|
secretion system apparatus protein SsaV |
NC_010102 (Salmonella enterica SGSC4150; SPB7) |
0.0 |
99 |
|
putative type III secretion protein |
NC_016810 (Salmonella enterica SL1344) |
0.0 |
99 |
|
secretion system apparatus protein SsaV |
NC_011080 (Salmonella enterica SL254) |
0.0 |
99 |
|
secretion system apparatus protein SsaV |
NC_011083 (Salmonella enterica SL476) |
0.0 |
99 |
|
secretion system apparatus protein SsaV |
NC_016860 (Salmonella enterica T000240) |
0.0 |
99 |
|
secretion system apparatus protein SsaV |
NC_021151 (Salmonella enterica U288) |
0.0 |
99 |
|
secretion system apparatus protein SsaV |
NC_016863 (Salmonella enterica UK-1) |
0.0 |
99 |
|
putative type III secretion protein |
NC_003198 (Salmonella enterica CT18) |
0.0 |
99 |
|
Secretion system apparatus protein ssaV |
NC_016832 (Salmonella enterica P-stx-12) |
0.0 |
99 |
|
secretion system apparatus protein SsaV |
NC_004631 (Salmonella enterica Ty2) |
0.0 |
99 |
|
secretion system apparatus protein SsaV |
NC_021176 (Salmonella enterica Ty21a) |
0.0 |
99 |
|
secretion system apparatus protein SsaV |
NC_012125 (Salmonella enterica RKS4594) |
0.0 |
100 |
|
type III secretion protein |
NC_017046 (Salmonella enterica 798) |
0.0 |
99 |
|
Secretion system apparatus protein SsaV |
NC_021902 (Salmonella enterica USMARC-S3124.1) |
0.0 |
99 |
|
secretion system apparatus protein SsaV |
NC_010067 (Salmonella enterica RSK2980) |
0.0 |
97 |
|
secretion system apparatus protein SsaV |
NC_007712 (Sodalis glossinidius morsitans) |
6e-177 |
69 |
|
secretion system apparatus protein SsaV |
NC_012751 (Candidatus Hamiltonella defensa T5A) |
2e-161 |
55 |
|
secretion system apparatus protein SsaV |
NC_005810 (Yersinia pestis 91001) |
3e-160 |
58 |
|
secretion system apparatus protein SsaV |
NC_017168 (Yersinia pestis A1122) |
3e-160 |
58 |
|
secretion system apparatus protein SsaV |
NC_003143 (Yersinia pestis CO92) |
3e-160 |
58 |
|
secretion system apparatus protein |
NC_017154 (Yersinia pestis D106004) |
3e-160 |
58 |
|
secretion system apparatus protein |
NC_017160 (Yersinia pestis D182038) |
3e-160 |
58 |
|
secretion system apparatus protein |
NC_017265 (Yersinia pestis Harbin 35) |
3e-160 |
58 |
|
secretion system apparatus protein SsaV |
NC_004088 (Yersinia pestis KIM) |
3e-160 |
58 |
|
secretion system apparatus protein |
NC_014029 (Yersinia pestis Z176003) |
3e-160 |
58 |
|
secretion system apparatus protein SsaV |
NC_008150 (Yersinia pestis Antiqua) |
9e-160 |
58 |
|
secretion system apparatus protein SsaV |
NC_009381 (Yersinia pestis Pestoides F) |
9e-160 |
58 |
|
secretion system apparatus protein SsaV |
NC_006155 (Yersinia pseudotuberculosis IP 32953) |
6e-159 |
58 |
|
secretion system apparatus protein SsaV |
NC_010634 (Yersinia pseudotuberculosis PB1/+) |
6e-159 |
58 |
|
secretion system apparatus protein SsaV |
NC_009708 (Yersinia pseudotuberculosis IP 31758) |
1e-158 |
58 |
|
secretion system apparatus protein SsaV |
NC_010465 (Yersinia pseudotuberculosis YPIII) |
1e-158 |
58 |
|
Secretion system apparatus protein ssaV |
NC_015224 (Yersinia enterocolitica 105.5R(r)) |
7e-157 |
60 |
|
type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV) |
NC_017564 (Yersinia enterocolitica Y11) |
2e-156 |
60 |
|
type III secretion protein, HrcV family |
NC_017579 (Shewanella baltica OS117) |
2e-147 |
54 |
|
secretion system apparatus protein SsaV |
NC_009052 (Shewanella baltica OS155) |
2e-147 |
54 |
|
secretion system apparatus protein SsaV |
NC_009997 (Shewanella baltica OS195) |
6e-147 |
54 |
|
type III secretion protein, HrcV family |
NC_016901 (Shewanella baltica OS678) |
6e-147 |
54 |
|
type III secretion protein, HrcV family |
NC_017571 (Shewanella baltica BA175) |
3e-145 |
54 |
|
type III secretion system apparatus protein, HrcV family |
NC_014012 (Shewanella violacea DSS12) |
5e-138 |
52 |
|
type III secretion protein, HrcV family |
NC_012779 (Edwardsiella ictaluri 93-146) |
3e-136 |
52 |
|
type III secretion protein, HrcV family |
NC_013508 (Edwardsiella tarda EIB202) |
6e-134 |
52 |
|
protein EsaV |
NC_017309 (Edwardsiella tarda FL6-60) |
6e-134 |
52 |
|
putative translocator EscV |
NC_013364 (Escherichia coli 11128) |
6e-134 |
49 |
|
secretion system apparatus protein SsaV |
NC_020796 (Edwardsiella tarda C07-087) |
1e-133 |
52 |
|
T3SS structural protein EscV |
NC_013716 (Citrobacter rodentium ICC168) |
2e-132 |
49 |
|
secretion system apparatus protein SsaV |
NC_005085 (Chromobacterium violaceum ATCC 12472) |
6e-131 |
52 |
|
translocator EscV |
NC_013353 (Escherichia coli 12009) |
1e-130 |
49 |
|
translocator EscV |
NC_011601 (Escherichia coli E2348/69) |
1e-130 |
49 |
|
T3SS structure protein EscV |
NC_013361 (Escherichia coli 11368) |
2e-130 |
49 |
|
escV |
NC_013941 (Escherichia coli CB9615) |
1e-123 |
49 |
|
type III secretion protein, HrcV family |
NC_011353 (Escherichia coli EC4115) |
1e-123 |
49 |
|
hypothetical protein |
NC_002655 (Escherichia coli EDL933) |
1e-123 |
49 |
|
escV |
NC_017656 (Escherichia coli RM12579) |
1e-123 |
49 |
|
hypothetical protein |
NC_002695 (Escherichia coli Sakai) |
1e-123 |
49 |
|
LEE-encoded type III secretion system factor |
NC_013008 (Escherichia coli TW14359) |
1e-123 |
49 |
|
hypothetical protein |
NC_017906 (Escherichia coli Xuzhou21) |
1e-123 |
49 |
|
type III secretory pathway subunit EscV |
NC_007645 (Hahella chejuensis KCTC 2396) |
3e-109 |
43 |
|
type III secretion pore protein |
NC_018829 (Bordetella bronchiseptica MO149) |
1e-100 |
43 |
|
putative type III secretion pore protein |
NC_017223 (Bordetella pertussis CS) |
1e-100 |
43 |
|
type III secretion pore protein |
NC_002929 (Bordetella pertussis Tohama I) |
1e-100 |
43 |
|
type III secretion pore protein |
NC_018518 (Bordetella pertussis 18323) |
2e-100 |
43 |
|
type III secretory pathway subunit EscV |
NC_007645 (Hahella chejuensis KCTC 2396) |
2e-100 |
43 |
|
type III secretion pore protein |
NC_018828 (Bordetella parapertussis Bpp5) |
5e-100 |
43 |
|
type III secretion pore protein |
NC_002927 (Bordetella bronchiseptica RB50) |
6e-100 |
43 |
|
type III secretion pore protein |
NC_019382 (Bordetella bronchiseptica 253) |
8e-100 |
43 |
|
HrcV family type III secretion protein |
NC_008741 (Desulfovibrio vulgaris DP4) |
2e-99 |
41 |
|
type III secretion inner membrane protein HrcV family |
NC_005863 (Desulfovibrio vulgaris Hildenborough) |
2e-99 |
41 |
|
type III secretion protein, HrcV family |
NC_017311 (Desulfovibrio vulgaris RCH1) |
2e-99 |
41 |
|
Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV |
NC_021285 (Achromobacter xylosoxidans NH44784-1996) |
6e-99 |
42 |
|
type III secretion pore protein |
NC_002928 (Bordetella parapertussis 12822) |
3e-97 |
42 |
|
Low calcium response locus protein D |
NC_015717 (Hyphomicrobium sp. MC1) |
5e-97 |
43 |
|
Low calcium response locus protein D (LcrD) |
NC_016642 (Pseudovibrio sp. FO-BEG1) |
9e-94 |
41 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_006905_P3' AND ph.id_pai_orf='39' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc