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PAthogenisity Island DataBase (PAI DB)

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Homologs of HH0271 gene of NC_004917_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) HH0271
( NP_859802.1 )

hypothetical protein

NC_004917
(Helicobacter hepaticus ATCC 51449)

3e-10

100

2) CJJ81176_pTet0022
( YP_001004026.1 )

hypothetical protein

NC_008790
(Campylobacter jejuni 81-176)

0.014

3) G157_08740
( YP_008543098.1 )

cpp25

NC_022355
(Campylobacter coli CVM N29710)

0.022

4) CJS3_pTet0038
( YP_005660376.1 )

cpp25

NC_017282
(Campylobacter jejuni S3)

0.022

• Sequence Alignments

1) HH0271 in NC_004917


> NC_004917_P1|39|G39|32265770|NP_859802.1|Helicobacter_hepaticus_ATCC_51449|+|43696..43800|-|HH0271|hypothetical 
protein
Length=34

 Score = 58.4 bits (202),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 34/34 (100%), Positives = 34/34 (100%), Gaps = 0/34 (0%)

Query  1   MLQEGFVVARQKGSHRIIPKIIKELFAIIKSARE  34
           MLQEGFVVARQKGSHRIIPKIIKELFAIIKSARE
Sbjct  1   MLQEGFVVARQKGSHRIIPKIIKELFAIIKSARE  34

2) CJJ81176_pTet0022 in NC_008790


> NC_004917_P1|39|G39|32265770|NP_859802.1|Helicobacter_hepaticus_ATCC_51449|+|43696..43800|-|HH0271|hypothetical 
protein
Length=34

 Score = 33.2 bits (106),  Expect = 0.014, Method: Compositional matrix adjust.
 Identities = 21/52 (41%), Positives = 28/52 (54%), Gaps = 18/52 (34%)

Query  16  LLQNNFLIDRQKGSHRIYKKGLYRMVIPHHIGEILHPKIIKQLFEIIEVAKD  67
           +LQ+ F++ RQKGSHRI                   PKIIK+LF II  A++
Sbjct  1   MLQEGFVVARQKGSHRII------------------PKIIKELFAIIKSARE  34

3) G157_08740 in NC_022355


> NC_004917_P1|39|G39|32265770|NP_859802.1|Helicobacter_hepaticus_ATCC_51449|+|43696..43800|-|HH0271|hypothetical 
protein
Length=34

 Score = 32.4 bits (103),  Expect = 0.022, Method: Compositional matrix adjust.
 Identities = 21/52 (41%), Positives = 28/52 (54%), Gaps = 18/52 (34%)

Query  16  LLQNDFSIDRQKGSHRIYKKGLYRMVIPHHSGEILHPKIIKQLFEIIEVAKD  67
           +LQ++F + RQKGSHRI                   PKIIK+LF II  A++
Sbjct  1   MLQEGFVVARQKGSHRII------------------PKIIKELFAIIKSARE  34

4) CJS3_pTet0038 in NC_017282


> NC_004917_P1|39|G39|32265770|NP_859802.1|Helicobacter_hepaticus_ATCC_51449|+|43696..43800|-|HH0271|hypothetical 
protein
Length=34

 Score = 32.4 bits (103),  Expect = 0.022, Method: Compositional matrix adjust.
 Identities = 21/52 (41%), Positives = 28/52 (54%), Gaps = 18/52 (34%)

Query  16  LLQNDFSIDRQKGSHRIYKKGLYRMVIPHHSGEILHPKIIKQLFEIIEVAKD  67
           +LQ++F + RQKGSHRI                   PKIIK+LF II  A++
Sbjct  1   MLQEGFVVARQKGSHRII------------------PKIIKELFAIIKSARE  34